0s autopkgtest [22:54:03]: starting date and time: 2024-07-12 22:54:03+0000 0s autopkgtest [22:54:03]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [22:54:03]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ssitw_vz/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade paml --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-3.1ubuntu3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-7.secgroup --name adt-oracular-ppc64el-paml-20240712-225403-juju-7f2275-prod-proposed-migration-environment-2-5bc05e38-646c-441e-9273-76cf175661a6 --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 118s autopkgtest [22:56:01]: testbed dpkg architecture: ppc64el 118s autopkgtest [22:56:01]: testbed apt version: 2.9.6 118s autopkgtest [22:56:01]: @@@@@@@@@@@@@@@@@@@@ test bed setup 119s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 120s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [360 kB] 120s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 120s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [46.5 kB] 120s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3288 B] 120s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [74.0 kB] 120s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2132 B] 120s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 120s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 120s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [365 kB] 120s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [9000 B] 120s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1788 B] 120s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 122s Fetched 997 kB in 1s (1186 kB/s) 122s Reading package lists... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 124s Calculating upgrade... 125s The following packages will be upgraded: 125s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 125s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s Need to get 10.1 MB of archives. 125s After this operation, 1843 kB disk space will be freed. 125s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-devtools ppc64el 2.39-3.1ubuntu3 [29.5 kB] 125s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6-dev ppc64el 2.39-3.1ubuntu3 [1982 kB] 125s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-dev-bin ppc64el 2.39-3.1ubuntu3 [21.0 kB] 125s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6 ppc64el 2.39-3.1ubuntu3 [3174 kB] 126s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-bin ppc64el 2.39-3.1ubuntu3 [720 kB] 126s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el locales all 2.39-3.1ubuntu3 [4220 kB] 126s Preconfiguring packages ... 127s Fetched 10.1 MB in 2s (5929 kB/s) 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 127s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu3_ppc64el.deb ... 127s Unpacking libc-devtools (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 127s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu3_ppc64el.deb ... 127s Unpacking libc6-dev:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 127s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu3_ppc64el.deb ... 127s Unpacking libc-dev-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 127s Preparing to unpack .../libc6_2.39-3.1ubuntu3_ppc64el.deb ... 127s Unpacking libc6:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 127s Setting up libc6:ppc64el (2.39-3.1ubuntu3) ... 127s Error: Could not restart systemd, systemd binary not working 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 127s Preparing to unpack .../libc-bin_2.39-3.1ubuntu3_ppc64el.deb ... 127s Unpacking libc-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 128s Setting up libc-bin (2.39-3.1ubuntu3) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 128s Preparing to unpack .../locales_2.39-3.1ubuntu3_all.deb ... 128s Unpacking locales (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 128s Setting up locales (2.39-3.1ubuntu3) ... 128s Generating locales (this might take a while)... 130s en_US.UTF-8... done 130s Generation complete. 130s Setting up libc-dev-bin (2.39-3.1ubuntu3) ... 130s Setting up libc-devtools (2.39-3.1ubuntu3) ... 130s Setting up libc6-dev:ppc64el (2.39-3.1ubuntu3) ... 130s Processing triggers for man-db (2.12.1-2) ... 131s Processing triggers for systemd (256-1ubuntu1) ... 132s Reading package lists... 132s Building dependency tree... 132s Reading state information... 132s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 133s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 133s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 133s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 133s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 134s Reading package lists... 134s Reading package lists... 134s Building dependency tree... 134s Reading state information... 134s Calculating upgrade... 134s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 134s Reading package lists... 135s Building dependency tree... 135s Reading state information... 135s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 137s autopkgtest [22:56:20]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 138s autopkgtest [22:56:21]: @@@@@@@@@@@@@@@@@@@@ apt-source paml 140s Get:1 http://ftpmaster.internal/ubuntu oracular/universe paml 4.9j+dfsg-4 (dsc) [2204 B] 140s Get:2 http://ftpmaster.internal/ubuntu oracular/universe paml 4.9j+dfsg-4 (tar) [1375 kB] 140s Get:3 http://ftpmaster.internal/ubuntu oracular/universe paml 4.9j+dfsg-4 (diff) [7128 B] 140s gpgv: Signature made Sat Dec 24 15:02:32 2022 UTC 140s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 140s gpgv: issuer "emollier@debian.org" 140s gpgv: Can't check signature: No public key 140s dpkg-source: warning: cannot verify inline signature for ./paml_4.9j+dfsg-4.dsc: no acceptable signature found 140s autopkgtest [22:56:23]: testing package paml version 4.9j+dfsg-4 141s autopkgtest [22:56:24]: build not needed 142s autopkgtest [22:56:25]: test run-unit-test: preparing testbed 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Starting pkgProblemResolver with broken count: 0 143s Starting 2 pkgProblemResolver with broken count: 0 143s Done 143s The following additional packages will be installed: 143s paml paml-doc 143s The following NEW packages will be installed: 143s autopkgtest-satdep paml paml-doc 143s 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. 143s Need to get 1702 kB/1703 kB of archives. 143s After this operation, 8679 kB of additional disk space will be used. 143s Get:1 /tmp/autopkgtest.hNxHc7/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [708 B] 143s Get:2 http://ftpmaster.internal/ubuntu oracular/universe ppc64el paml ppc64el 4.9j+dfsg-4 [699 kB] 144s Get:3 http://ftpmaster.internal/ubuntu oracular/universe ppc64el paml-doc all 4.9j+dfsg-4 [1003 kB] 144s Fetched 1702 kB in 1s (2295 kB/s) 144s Selecting previously unselected package paml. 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 144s Preparing to unpack .../paml_4.9j+dfsg-4_ppc64el.deb ... 144s Unpacking paml (4.9j+dfsg-4) ... 144s Selecting previously unselected package paml-doc. 144s Preparing to unpack .../paml-doc_4.9j+dfsg-4_all.deb ... 144s Unpacking paml-doc (4.9j+dfsg-4) ... 144s Selecting previously unselected package autopkgtest-satdep. 144s Preparing to unpack .../1-autopkgtest-satdep.deb ... 144s Unpacking autopkgtest-satdep (0) ... 144s Setting up paml-doc (4.9j+dfsg-4) ... 144s Setting up paml (4.9j+dfsg-4) ... 144s Setting up autopkgtest-satdep (0) ... 147s (Reading database ... 72979 files and directories currently installed.) 147s Removing autopkgtest-satdep (0) ... 147s autopkgtest [22:56:30]: test run-unit-test: [----------------------- 147s Test 4 150s 150s CODONML in paml version 4.9j, October 2019 150s 150s ---------------------------------------------- 150s Phe F TTT | Ser S TCT | Tyr Y TAT | Cys C TGT 150s TTC | TCC | TAC | TGC 150s Leu L TTA | TCA | *** * TAA | *** * TGA 150s TTG | TCG | TAG | Trp W TGG 150s ---------------------------------------------- 150s Leu L CTT | Pro P CCT | His H CAT | Arg R CGT 150s CTC | CCC | CAC | CGC 150s CTA | CCA | Gln Q CAA | CGA 150s CTG | CCG | CAG | CGG 150s ---------------------------------------------- 150s Ile I ATT | Thr T ACT | Asn N AAT | Ser S AGT 150s ATC | ACC | AAC | AGC 150s ATA | ACA | Lys K AAA | Arg R AGA 150s Met M ATG | ACG | AAG | AGG 150s ---------------------------------------------- 150s Val V GTT | Ala A GCT | Asp D GAT | Gly G GGT 150s GTC | GCC | GAC | GGC 150s GTA | GCA | Glu E GAA | GGA 150s GTG | GCG | GAG | GGG 150s ---------------------------------------------- 150s Nice code, uuh? 150s ns = 7 ls = 390 150s Reading sequences, sequential format.. 150s Reading seq # 1: Hsa_Human Reading seq # 2: Hla_gibbon Reading seq # 3: Cgu/Can_colobus Reading seq # 4: Pne_langur Reading seq # 5: Mmu_rhesus Reading seq # 6: Ssc_squirrelM Reading seq # 7: Cja_marmoset 150s Sequences read.. 150s Counting site patterns.. 0:00 150s Compressing, 81 patterns at 130 / 130 sites (100.0%), 0:00 150s Collecting fpatt[] & pose[], 81 patterns at 130 / 130 sites (100.0%), 0:00 150s Counting codons.. 150s 150s 168 bytes for distance 150s 79056 bytes for conP 150s 0 bytes for fhK 150s 5000000 bytes for space 150s 150s 2 branch types are in tree. Stop if wrong. 150s TREE # 1 150s ((1, 2), ((3, 4), 5), (6, 7)); MP score: 65 150s 197640 bytes for conP, adjusted 150s 150s 0.015434 0.015966 0.104144 0.039612 0.081606 0.093030 0.038845 0.097402 0.061870 0.030119 0.010566 0.829254 0.952179 0.885583 150s 150s ntime & nrate & np: 11 3 14 150s 150s Bounds (np=14): 150s 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000100 0.000100 150s 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 999.000000 999.000000 150s 150s np = 14 150s lnL0 = -948.325038 150s 150s Iterating by ming2 150s Initial: fx= 948.325038 150s x= 0.01543 0.01597 0.10414 0.03961 0.08161 0.09303 0.03884 0.09740 0.06187 0.03012 0.01057 0.82925 0.95218 0.88558 150s 150s 1 h-m-p 0.0000 0.0011 418.7241 ++YYCCC 937.781973 4 0.0002 27 | 0/14 150s 2 h-m-p 0.0002 0.0008 163.2727 +YYYCCC 929.088490 5 0.0006 52 | 0/14 150s 3 h-m-p 0.0005 0.0025 50.7418 CCC 928.597291 2 0.0005 73 | 0/14 150s 4 h-m-p 0.0004 0.0047 68.6679 +CYCCC 926.236998 4 0.0021 98 | 0/14 150s 5 h-m-p 0.0003 0.0056 496.2114 +CYCCC 920.284522 4 0.0010 123 | 0/14 150s 6 h-m-p 0.0005 0.0027 400.3556 YCCCC 915.753262 4 0.0010 147 | 0/14 150s 7 h-m-p 0.0004 0.0021 249.6985 YCYCCC 911.608583 5 0.0010 172 | 0/14 150s 8 h-m-p 0.0002 0.0012 115.1206 CCCC 911.083630 3 0.0004 195 | 0/14 150s 9 h-m-p 0.0008 0.0038 48.2844 YCC 910.847529 2 0.0005 215 | 0/14 150s 10 h-m-p 0.0047 0.1253 5.1134 -YC 910.840850 1 0.0005 234 | 0/14 150s 11 h-m-p 0.0010 0.2851 2.5129 +YC 910.801496 1 0.0100 253 | 0/14 150s 12 h-m-p 0.0005 0.0522 48.2682 ++YCCC 909.826889 3 0.0141 277 | 0/14 150s 13 h-m-p 0.0006 0.0032 827.2378 CCCCC 908.278537 4 0.0012 302 | 0/14 150s 14 h-m-p 0.0395 0.1975 10.1728 CYCCCC 907.301757 5 0.0562 328 | 0/14 150s 15 h-m-p 0.7082 3.7071 0.8074 YCCCC 905.544370 4 1.3951 352 | 0/14 150s 16 h-m-p 0.8769 4.3844 1.0874 CCCC 904.632581 3 0.7794 389 | 0/14 150s 17 h-m-p 1.0016 5.0082 0.7215 CCCC 903.973230 3 1.4779 412 | 0/14 150s 18 h-m-p 1.6000 8.0000 0.6390 CYCC 903.556514 3 1.9893 448 | 0/14 150s 19 h-m-p 1.6000 8.0000 0.4355 CCC 903.448248 2 1.4493 483 | 0/14 150s 20 h-m-p 1.6000 8.0000 0.2550 CC 903.427477 1 1.3181 516 | 0/14 156s 21 h-m-p 1.6000 8.0000 0.1330 YC 903.423313 1 0.9527 548 | 0/14 156s 22 h-m-p 1.6000 8.0000 0.0655 +CC 903.415205 1 5.5356 582 | 0/14 156s 23 h-m-p 1.6000 8.0000 0.2035 ++ 903.366543 m 8.0000 613 | 0/14 156s 24 h-m-p 1.0238 8.0000 1.5902 +YCC 903.293026 2 2.9613 648 | 0/14 156s 25 h-m-p 1.6000 8.0000 1.8478 YCCC 903.219726 3 3.1092 670 | 0/14 156s 26 h-m-p 1.6000 8.0000 2.9122 YCC 903.178370 2 2.7972 690 | 0/14 156s 27 h-m-p 1.6000 8.0000 3.8750 YC 903.144039 1 3.7620 708 | 0/14 156s 28 h-m-p 1.6000 8.0000 6.2347 YCC 903.122248 2 2.9021 728 | 0/14 156s 29 h-m-p 1.6000 8.0000 9.1607 YC 903.106022 1 3.6234 746 | 0/14 156s 30 h-m-p 1.6000 8.0000 13.6076 YCC 903.096125 2 2.7969 766 | 0/14 156s 31 h-m-p 1.6000 8.0000 19.8577 YC 903.088554 1 3.7584 784 | 0/14 156s 32 h-m-p 1.6000 8.0000 30.1749 YC 903.084125 1 2.6137 802 | 0/14 156s 33 h-m-p 1.6000 8.0000 42.1968 YC 903.080812 1 3.5179 820 | 0/14 156s 34 h-m-p 1.6000 8.0000 66.4101 CC 903.078712 1 2.4729 839 | 0/14 156s 35 h-m-p 0.8803 4.4014 90.9617 +C 903.077140 0 3.3469 857 | 0/14 156s 36 h-m-p 0.1389 0.6947 138.0611 ++ 903.076648 m 0.6947 874 | 1/14 156s 37 h-m-p 0.9396 8.0000 0.0033 C 903.076552 0 1.0000 891 | 1/14 156s 38 h-m-p 1.6000 8.0000 0.0001 Y 903.076551 0 1.1530 921 | 1/14 156s 39 h-m-p 1.6000 8.0000 0.0000 C 903.076551 0 1.3799 951 | 1/14 156s 40 h-m-p 1.6000 8.0000 0.0000 Y 903.076551 0 0.8285 981 156s Out.. 156s lnL = -903.076551 156s 982 lfun, 1964 eigenQcodon, 10802 P(t) 156s 156s 2 branch types are in tree. Stop if wrong. 156s TREE # 2 156s ((1, 2), ((3, 4), 5), (6, 7)); MP score: 65 156s 0.089988 0.104390 0.055508 0.105247 0.043538 0.012805 0.050459 0.089424 0.054354 0.017241 0.037634 0.933082 1.046697 1.099825 156s 156s ntime & nrate & np: 11 3 14 156s 156s Bounds (np=14): 156s 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000004 0.000100 0.000100 0.000100 156s 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 50.000000 999.000000 999.000000 999.000000 156s 156s np = 14 156s lnL0 = -947.086022 156s 156s Iterating by ming2 156s Initial: fx= 947.086022 156s x= 0.08999 0.10439 0.05551 0.10525 0.04354 0.01281 0.05046 0.08942 0.05435 0.01724 0.03763 0.93308 1.04670 1.09982 156s 156s 1 h-m-p 0.0000 0.0011 341.0914 ++YCCCC 935.254505 4 0.0004 28 | 0/14 156s 2 h-m-p 0.0001 0.0007 163.7832 +YYCCCC 928.197463 5 0.0005 54 | 0/14 156s 3 h-m-p 0.0002 0.0009 83.4045 CCCC 927.547403 3 0.0002 77 | 0/14 156s 4 h-m-p 0.0004 0.0026 52.4776 YCCC 926.881248 3 0.0007 99 | 0/14 156s 5 h-m-p 0.0004 0.0055 100.8610 +CCCC 924.733104 3 0.0015 123 | 0/14 156s 6 h-m-p 0.0013 0.0066 119.8615 +YCYCCC 917.911565 5 0.0039 149 | 0/14 156s 7 h-m-p 0.0003 0.0017 455.7581 +YCCCC 912.257985 4 0.0009 174 | 0/14 156s 8 h-m-p 0.0002 0.0008 448.0914 +YCCCC 909.853512 4 0.0004 199 | 0/14 156s 9 h-m-p 0.0003 0.0014 98.5656 CCCC 909.521516 3 0.0003 222 | 0/14 156s 10 h-m-p 0.0022 0.0108 11.8255 C 909.489703 0 0.0006 239 | 0/14 156s 11 h-m-p 0.0010 0.0988 6.4607 ++CCCCC 909.032706 4 0.0224 266 | 0/14 156s 12 h-m-p 0.0031 0.0157 26.9795 CCC 908.981215 2 0.0007 287 | 0/14 156s 13 h-m-p 0.0066 1.6011 3.0425 +++CYCCC 906.021011 4 0.6078 314 | 0/14 156s 14 h-m-p 0.0003 0.0013 1087.0595 CCCC 905.324915 3 0.0004 337 | 0/14 156s 15 h-m-p 0.2363 3.6339 1.7256 YCCCC 904.023662 4 0.5214 361 | 0/14 156s 16 h-m-p 0.6870 3.4350 0.6840 CCCCC 902.851566 4 1.1860 386 | 0/14 156s 17 h-m-p 0.7333 3.6665 0.5339 CCCC 902.332113 3 0.8411 423 | 0/14 156s 18 h-m-p 1.0425 6.1057 0.4307 CC 901.881664 1 1.6344 456 | 0/14 156s 19 h-m-p 1.6000 8.0000 0.3963 CYC 901.700834 2 1.6322 490 | 0/14 156s 20 h-m-p 1.6000 8.0000 0.3030 CCC 901.637764 2 1.4284 525 | 0/14 156s 21 h-m-p 1.6000 8.0000 0.0971 YC 901.632096 1 1.1897 557 | 0/14 156s 22 h-m-p 1.6000 8.0000 0.0169 C 901.631730 0 1.4928 588 | 0/14 157s 23 h-m-p 1.6000 8.0000 0.0033 YC 901.631658 1 2.7266 620 | 0/14 157s 24 h-m-p 0.9888 8.0000 0.0092 ++ 901.631351 m 8.0000 651 | 0/14 157s 25 h-m-p 0.4564 8.0000 0.1614 +YC 901.630947 1 1.4276 684 | 0/14 157s 26 h-m-p 1.6000 8.0000 0.0094 C 901.630891 0 1.5917 715 | 0/14 157s 27 h-m-p 1.6000 8.0000 0.0010 Y 901.630891 0 1.2665 746 | 0/14 157s 28 h-m-p 1.6000 8.0000 0.0002 Y 901.630891 0 1.2493 777 | 0/14 157s 29 h-m-p 1.6000 8.0000 0.0000 Y 901.630891 0 0.7521 808 | 0/14 157s 30 h-m-p 1.3983 8.0000 0.0000 C 901.630891 0 0.5429 839 | 0/14 157s 31 h-m-p 1.0593 8.0000 0.0000 --Y 901.630891 0 0.0166 872 157s Out.. 157s lnL = -901.630891 157s 873 lfun, 1746 eigenQcodon, 9603 P(t) 157s 157s Tree comparisons (Kishino & Hasegawa 1989; Shimodaira & Hasegawa 1999) 157s Reading lnf for tree # 1 Reading lnf for tree # 2, done. 157s Calculating SEs by sitewise comparison, 0:10 157s RELL Bootstrapping.. replicate: 100 / 10000 0:10 RELL Bootstrapping.. replicate: 200 / 10000 0:10 RELL Bootstrapping.. replicate: 300 / 10000 0:10 RELL Bootstrapping.. replicate: 400 / 10000 0:10 RELL Bootstrapping.. replicate: 500 / 10000 0:10 RELL Bootstrapping.. replicate: 600 / 10000 0:10 RELL Bootstrapping.. replicate: 700 / 10000 0:10 RELL Bootstrapping.. replicate: 800 / 10000 0:10 RELL Bootstrapping.. replicate: 900 / 10000 0:10 RELL Bootstrapping.. replicate: 1000 / 10000 0:10 RELL Bootstrapping.. replicate: 1100 / 10000 0:10 RELL Bootstrapping.. replicate: 1200 / 10000 0:10 RELL Bootstrapping.. replicate: 1300 / 10000 0:10 RELL Bootstrapping.. replicate: 1400 / 10000 0:10 RELL Bootstrapping.. replicate: 1500 / 10000 0:10 RELL Bootstrapping.. replicate: 1600 / 10000 0:10 RELL Bootstrapping.. replicate: 1700 / 10000 0:10 RELL Bootstrapping.. replicate: 1800 / 10000 0:10 RELL Bootstrapping.. replicate: 1900 / 10000 0:10 RELL Bootstrapping.. replicate: 2000 / 10000 0:10 RELL Bootstrapping.. replicate: 2100 / 10000 0:10 RELL Bootstrapping.. replicate: 2200 / 10000 0:10 RELL Bootstrapping.. replicate: 2300 / 10000 0:10 RELL Bootstrapping.. replicate: 2400 / 10000 0:10 RELL Bootstrapping.. replicate: 2500 / 10000 0:10 RELL Bootstrapping.. replicate: 2600 / 10000 0:10 RELL Bootstrapping.. replicate: 2700 / 10000 0:10 RELL Bootstrapping.. replicate: 2800 / 10000 0:10 RELL Bootstrapping.. replicate: 2900 / 10000 0:10 RELL Bootstrapping.. replicate: 3000 / 10000 0:10 RELL Bootstrapping.. replicate: 3100 / 10000 0:10 RELL Bootstrapping.. replicate: 3200 / 10000 0:10 RELL Bootstrapping.. replicate: 3300 / 10000 0:10 RELL Bootstrapping.. replicate: 3400 / 10000 0:10 RELL Bootstrapping.. replicate: 3500 / 10000 0:10 RELL Bootstrapping.. replicate: 3600 / 10000 0:10 RELL Bootstrapping.. replicate: 3700 / 10000 0:10 RELL Bootstrapping.. replicate: 3800 / 10000 0:10 RELL Bootstrapping.. replicate: 3900 / 10000 0:10 RELL Bootstrapping.. replicate: 4000 / 10000 0:10 RELL Bootstrapping.. replicate: 4100 / 10000 0:10 RELL Bootstrapping.. replicate: 4200 / 10000 0:10 RELL Bootstrapping.. replicate: 4300 / 10000 0:10 RELL Bootstrapping.. replicate: 4400 / 10000 0:10 RELL Bootstrapping.. replicate: 4500 / 10000 0:10 RELL Bootstrapping.. replicate: 4600 / 10000 0:10 RELL Bootstrapping.. replicate: 4700 / 10000 0:10 RELL Bootstrapping.. replicate: 4800 / 10000 0:10 RELL Bootstrapping.. replicate: 4900 / 10000 0:10 RELL Bootstrapping.. replicate: 5000 / 10000 0:10 RELL Bootstrapping.. replicate: 5100 / 10000 0:10 RELL Bootstrapping.. replicate: 5200 / 10000 0:10 RELL Bootstrapping.. replicate: 5300 / 10000 0:10 RELL Bootstrapping.. replicate: 5400 / 10000 0:10 RELL Bootstrapping.. replicate: 5500 / 10000 0:10 RELL Bootstrapping.. replicate: 5600 / 10000 0:10 RELL Bootstrapping.. replicate: 5700 / 10000 0:10 RELL Bootstrapping.. replicate: 5800 / 10000 0:10 RELL Bootstrapping.. replicate: 5900 / 10000 0:10 RELL Bootstrapping.. replicate: 6000 / 10000 0:10 RELL Bootstrapping.. replicate: 6100 / 10000 0:10 RELL Bootstrapping.. replicate: 6200 / 10000 0:10 RELL Bootstrapping.. replicate: 6300 / 10000 0:10 RELL Bootstrapping.. replicate: 6400 / 10000 0:10 RELL Bootstrapping.. replicate: 6500 / 10000 0:10 RELL Bootstrapping.. replicate: 6600 / 10000 0:10 RELL Bootstrapping.. replicate: 6700 / 10000 0:10 RELL Bootstrapping.. replicate: 6800 / 10000 0:10 RELL Bootstrapping.. replicate: 6900 / 10000 0:10 RELL Bootstrapping.. replicate: 7000 / 10000 0:10 RELL Bootstrapping.. replicate: 7100 / 10000 0:10 RELL Bootstrapping.. replicate: 7200 / 10000 0:10 RELL Bootstrapping.. replicate: 7300 / 10000 0:10 RELL Bootstrapping.. replicate: 7400 / 10000 0:10 RELL Bootstrapping.. replicate: 7500 / 10000 0:10 RELL Bootstrapping.. replicate: 7600 / 10000 0:10 RELL Bootstrapping.. replicate: 7700 / 10000 0:10 RELL Bootstrapping.. replicate: 7800 / 10000 0:10 RELL Bootstrapping.. replicate: 7900 / 10000 0:10 RELL Bootstrapping.. replicate: 8000 / 10000 0:10 RELL Bootstrapping.. replicate: 8100 / 10000 0:10 RELL Bootstrapping.. replicate: 8200 / 10000 0:10 RELL Bootstrapping.. replicate: 8300 / 10000 0:10 RELL Bootstrapping.. replicate: 8400 / 10000 0:10 RELL Bootstrapping.. replicate: 8500 / 10000 0:10 RELL Bootstrapping.. replicate: 8600 / 10000 0:10 RELL Bootstrapping.. replicate: 8700 / 10000 0:10 RELL Bootstrapping.. replicate: 8800 / 10000 0:10 RELL Bootstrapping.. replicate: 8900 / 10000 0:10 RELL Bootstrapping.. replicate: 9000 / 10000 0:10 RELL Bootstrapping.. replicate: 9100 / 10000 0:10 RELL Bootstrapping.. replicate: 9200 / 10000 0:10 RELL Bootstrapping.. replicate: 9300 / 10000 0:10 RELL Bootstrapping.. replicate: 9400 / 10000 0:10 RELL Bootstrapping.. replicate: 9500 / 10000 0:10 RELL Bootstrapping.. replicate: 9600 / 10000 0:10 RELL Bootstrapping.. replicate: 9700 / 10000 0:10 RELL Bootstrapping.. replicate: 9800 / 10000 0:10 RELL Bootstrapping.. replicate: 9900 / 10000 0:10 RELL Bootstrapping.. replicate: 10000 / 10000 0:10 157s now doing S-H test 157s 157s Time used: 0:10 157s Passed 157s 158s autopkgtest [22:56:41]: test run-unit-test: -----------------------] 158s autopkgtest [22:56:41]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 158s run-unit-test PASS 158s autopkgtest [22:56:41]: @@@@@@@@@@@@@@@@@@@@ summary 158s run-unit-test PASS 174s nova [W] Using flock in scalingstack-bos01-ppc64el 174s Creating nova instance adt-oracular-ppc64el-paml-20240712-225403-juju-7f2275-prod-proposed-migration-environment-2-5bc05e38-646c-441e-9273-76cf175661a6 from image adt/ubuntu-oracular-ppc64el-server-20240712.img (UUID e4c6542a-b9ef-49c1-bc2b-ea42345fa49a)...