0s autopkgtest [21:50:29]: starting date and time: 2024-07-12 21:50:29+0000 0s autopkgtest [21:50:29]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [21:50:29]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xcd27vwy/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade libssw --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-3.1ubuntu3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-12.secgroup --name adt-oracular-ppc64el-libssw-20240712-215029-juju-7f2275-prod-proposed-migration-environment-2-7c102ad3-0bd0-49b9-9eea-9b796a4c012b --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 169s autopkgtest [21:53:18]: testbed dpkg architecture: ppc64el 169s autopkgtest [21:53:18]: testbed apt version: 2.9.6 169s autopkgtest [21:53:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 170s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 171s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [46.5 kB] 171s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3288 B] 171s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 171s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [360 kB] 171s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [74.0 kB] 171s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2132 B] 171s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 171s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 171s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [365 kB] 171s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [9000 B] 171s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1788 B] 171s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 173s Fetched 997 kB in 1s (1234 kB/s) 173s Reading package lists... 175s Reading package lists... 175s Building dependency tree... 175s Reading state information... 176s Calculating upgrade... 176s The following packages will be upgraded: 176s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 176s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s Need to get 10.1 MB of archives. 176s After this operation, 1843 kB disk space will be freed. 176s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-devtools ppc64el 2.39-3.1ubuntu3 [29.5 kB] 176s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6-dev ppc64el 2.39-3.1ubuntu3 [1982 kB] 177s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-dev-bin ppc64el 2.39-3.1ubuntu3 [21.0 kB] 177s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6 ppc64el 2.39-3.1ubuntu3 [3174 kB] 177s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-bin ppc64el 2.39-3.1ubuntu3 [720 kB] 177s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el locales all 2.39-3.1ubuntu3 [4220 kB] 178s Preconfiguring packages ... 178s Fetched 10.1 MB in 2s (6683 kB/s) 178s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 178s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu3_ppc64el.deb ... 178s Unpacking libc-devtools (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 178s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu3_ppc64el.deb ... 178s Unpacking libc6-dev:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 178s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu3_ppc64el.deb ... 178s Unpacking libc-dev-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 178s Preparing to unpack .../libc6_2.39-3.1ubuntu3_ppc64el.deb ... 178s Unpacking libc6:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 179s Setting up libc6:ppc64el (2.39-3.1ubuntu3) ... 179s Error: Could not restart systemd, systemd binary not working 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 179s Preparing to unpack .../libc-bin_2.39-3.1ubuntu3_ppc64el.deb ... 179s Unpacking libc-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 179s Setting up libc-bin (2.39-3.1ubuntu3) ... 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 179s Preparing to unpack .../locales_2.39-3.1ubuntu3_all.deb ... 179s Unpacking locales (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 179s Setting up locales (2.39-3.1ubuntu3) ... 180s Generating locales (this might take a while)... 181s en_US.UTF-8... done 181s Generation complete. 181s Setting up libc-dev-bin (2.39-3.1ubuntu3) ... 181s Setting up libc-devtools (2.39-3.1ubuntu3) ... 181s Setting up libc6-dev:ppc64el (2.39-3.1ubuntu3) ... 181s Processing triggers for man-db (2.12.1-2) ... 182s Processing triggers for systemd (256-1ubuntu1) ... 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 184s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 184s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 184s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 184s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 185s Reading package lists... 185s Reading package lists... 185s Building dependency tree... 185s Reading state information... 186s Calculating upgrade... 186s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 189s autopkgtest [21:53:38]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 189s autopkgtest [21:53:38]: @@@@@@@@@@@@@@@@@@@@ apt-source libssw 194s Get:1 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (dsc) [2501 B] 194s Get:2 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (tar) [12.3 MB] 194s Get:3 http://ftpmaster.internal/ubuntu oracular/universe libssw 1.1-14build1 (diff) [54.3 kB] 194s gpgv: Signature made Mon Apr 22 09:48:29 2024 UTC 194s gpgv: using RSA key 4FB588A84C2DDE79A74C77876FA458DD1DB03F71 194s gpgv: issuer "juliank@ubuntu.com" 194s gpgv: Can't check signature: No public key 194s dpkg-source: warning: cannot verify inline signature for ./libssw_1.1-14build1.dsc: no acceptable signature found 194s autopkgtest [21:53:43]: testing package libssw version 1.1-14build1 195s autopkgtest [21:53:44]: build not needed 196s autopkgtest [21:53:45]: test build-lib: preparing testbed 197s Reading package lists... 197s Building dependency tree... 197s Reading state information... 198s Starting pkgProblemResolver with broken count: 0 198s Starting 2 pkgProblemResolver with broken count: 0 198s Done 198s The following additional packages will be installed: 198s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 198s cpp-powerpc64le-linux-gnu g++ g++-13 g++-13-powerpc64le-linux-gnu 198s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-base 198s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu libasan8 libatomic1 198s libcc1-0 libgcc-13-dev libgomp1 libisl23 libitm1 liblsan0 libmpc3 198s libquadmath0 libssw-dev libssw0 libstdc++-13-dev libtsan2 libubsan1 198s zlib1g-dev 198s Suggested packages: 198s cpp-doc gcc-13-locales cpp-13-doc gcc-13-doc gcc-multilib manpages-dev 198s autoconf automake libtool flex bison gdb gcc-doc gdb-powerpc64le-linux-gnu 198s libstdc++-13-doc 198s The following NEW packages will be installed: 198s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 198s cpp-powerpc64le-linux-gnu g++ g++-13 g++-13-powerpc64le-linux-gnu 198s g++-powerpc64le-linux-gnu gcc gcc-13 gcc-13-base 198s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu libasan8 libatomic1 198s libcc1-0 libgcc-13-dev libgomp1 libisl23 libitm1 liblsan0 libmpc3 198s libquadmath0 libssw-dev libssw0 libstdc++-13-dev libtsan2 libubsan1 198s zlib1g-dev 198s 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. 198s Need to get 58.7 MB/58.7 MB of archives. 198s After this operation, 219 MB of additional disk space will be used. 198s Get:1 /tmp/autopkgtest.FerihY/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [732 B] 198s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el gcc-13-base ppc64el 13.2.0-23ubuntu4 [49.0 kB] 198s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el libisl23 ppc64el 0.26-3build1 [886 kB] 199s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el libmpc3 ppc64el 1.3.1-1build1 [62.1 kB] 199s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [10.7 MB] 200s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el cpp-13 ppc64el 13.2.0-23ubuntu4 [1038 B] 200s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 200s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 200s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcc1-0 ppc64el 14.1.0-1ubuntu1 [48.1 kB] 200s Get:10 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgomp1 ppc64el 14.1.0-1ubuntu1 [161 kB] 200s Get:11 http://ftpmaster.internal/ubuntu oracular/main ppc64el libitm1 ppc64el 14.1.0-1ubuntu1 [32.4 kB] 200s Get:12 http://ftpmaster.internal/ubuntu oracular/main ppc64el libatomic1 ppc64el 14.1.0-1ubuntu1 [10.7 kB] 200s Get:13 http://ftpmaster.internal/ubuntu oracular/main ppc64el libasan8 ppc64el 14.1.0-1ubuntu1 [2971 kB] 200s Get:14 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblsan0 ppc64el 14.1.0-1ubuntu1 [1328 kB] 200s Get:15 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtsan2 ppc64el 14.1.0-1ubuntu1 [2708 kB] 200s Get:16 http://ftpmaster.internal/ubuntu oracular/main ppc64el libubsan1 ppc64el 14.1.0-1ubuntu1 [1196 kB] 200s Get:17 http://ftpmaster.internal/ubuntu oracular/main ppc64el libquadmath0 ppc64el 14.1.0-1ubuntu1 [158 kB] 200s Get:18 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgcc-13-dev ppc64el 13.2.0-23ubuntu4 [1580 kB] 200s Get:19 http://ftpmaster.internal/ubuntu oracular/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [20.6 MB] 201s Get:20 http://ftpmaster.internal/ubuntu oracular/main ppc64el gcc-13 ppc64el 13.2.0-23ubuntu4 [482 kB] 201s Get:21 http://ftpmaster.internal/ubuntu oracular/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 201s Get:22 http://ftpmaster.internal/ubuntu oracular/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 201s Get:23 http://ftpmaster.internal/ubuntu oracular/main ppc64el libstdc++-13-dev ppc64el 13.2.0-23ubuntu4 [2512 kB] 201s Get:24 http://ftpmaster.internal/ubuntu oracular/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu4 [12.2 MB] 201s Get:25 http://ftpmaster.internal/ubuntu oracular/main ppc64el g++-13 ppc64el 13.2.0-23ubuntu4 [14.5 kB] 201s Get:26 http://ftpmaster.internal/ubuntu oracular/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 201s Get:27 http://ftpmaster.internal/ubuntu oracular/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 201s Get:28 http://ftpmaster.internal/ubuntu oracular/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 201s Get:29 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libssw0 ppc64el 1.1-14build1 [24.5 kB] 201s Get:30 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libssw-dev ppc64el 1.1-14build1 [26.4 kB] 201s Get:31 http://ftpmaster.internal/ubuntu oracular/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3.1ubuntu2 [902 kB] 202s Fetched 58.7 MB in 3s (18.2 MB/s) 202s Selecting previously unselected package gcc-13-base:ppc64el. 202s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 202s Preparing to unpack .../00-gcc-13-base_13.2.0-23ubuntu4_ppc64el.deb ... 202s Unpacking gcc-13-base:ppc64el (13.2.0-23ubuntu4) ... 202s Selecting previously unselected package libisl23:ppc64el. 202s Preparing to unpack .../01-libisl23_0.26-3build1_ppc64el.deb ... 202s Unpacking libisl23:ppc64el (0.26-3build1) ... 202s Selecting previously unselected package libmpc3:ppc64el. 202s Preparing to unpack .../02-libmpc3_1.3.1-1build1_ppc64el.deb ... 202s Unpacking libmpc3:ppc64el (1.3.1-1build1) ... 202s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 202s Preparing to unpack .../03-cpp-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ... 202s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 202s Selecting previously unselected package cpp-13. 202s Preparing to unpack .../04-cpp-13_13.2.0-23ubuntu4_ppc64el.deb ... 202s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 202s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 202s Preparing to unpack .../05-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 202s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 202s Selecting previously unselected package cpp. 202s Preparing to unpack .../06-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 202s Unpacking cpp (4:13.2.0-7ubuntu1) ... 202s Selecting previously unselected package libcc1-0:ppc64el. 202s Preparing to unpack .../07-libcc1-0_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libcc1-0:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libgomp1:ppc64el. 202s Preparing to unpack .../08-libgomp1_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libgomp1:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libitm1:ppc64el. 202s Preparing to unpack .../09-libitm1_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libitm1:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libatomic1:ppc64el. 202s Preparing to unpack .../10-libatomic1_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libatomic1:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libasan8:ppc64el. 202s Preparing to unpack .../11-libasan8_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libasan8:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package liblsan0:ppc64el. 202s Preparing to unpack .../12-liblsan0_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking liblsan0:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libtsan2:ppc64el. 202s Preparing to unpack .../13-libtsan2_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libtsan2:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libubsan1:ppc64el. 202s Preparing to unpack .../14-libubsan1_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libubsan1:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libquadmath0:ppc64el. 202s Preparing to unpack .../15-libquadmath0_14.1.0-1ubuntu1_ppc64el.deb ... 202s Unpacking libquadmath0:ppc64el (14.1.0-1ubuntu1) ... 202s Selecting previously unselected package libgcc-13-dev:ppc64el. 202s Preparing to unpack .../16-libgcc-13-dev_13.2.0-23ubuntu4_ppc64el.deb ... 202s Unpacking libgcc-13-dev:ppc64el (13.2.0-23ubuntu4) ... 203s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 203s Preparing to unpack .../17-gcc-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ... 203s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 203s Selecting previously unselected package gcc-13. 203s Preparing to unpack .../18-gcc-13_13.2.0-23ubuntu4_ppc64el.deb ... 203s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 203s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 203s Preparing to unpack .../19-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 203s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 203s Selecting previously unselected package gcc. 203s Preparing to unpack .../20-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 203s Unpacking gcc (4:13.2.0-7ubuntu1) ... 203s Selecting previously unselected package libstdc++-13-dev:ppc64el. 203s Preparing to unpack .../21-libstdc++-13-dev_13.2.0-23ubuntu4_ppc64el.deb ... 203s Unpacking libstdc++-13-dev:ppc64el (13.2.0-23ubuntu4) ... 203s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 203s Preparing to unpack .../22-g++-13-powerpc64le-linux-gnu_13.2.0-23ubuntu4_ppc64el.deb ... 203s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 204s Selecting previously unselected package g++-13. 204s Preparing to unpack .../23-g++-13_13.2.0-23ubuntu4_ppc64el.deb ... 204s Unpacking g++-13 (13.2.0-23ubuntu4) ... 204s Selecting previously unselected package g++-powerpc64le-linux-gnu. 204s Preparing to unpack .../24-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 204s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 204s Selecting previously unselected package g++. 204s Preparing to unpack .../25-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 204s Unpacking g++ (4:13.2.0-7ubuntu1) ... 204s Selecting previously unselected package build-essential. 204s Preparing to unpack .../26-build-essential_12.10ubuntu1_ppc64el.deb ... 204s Unpacking build-essential (12.10ubuntu1) ... 204s Selecting previously unselected package libssw0:ppc64el. 204s Preparing to unpack .../27-libssw0_1.1-14build1_ppc64el.deb ... 204s Unpacking libssw0:ppc64el (1.1-14build1) ... 204s Selecting previously unselected package libssw-dev:ppc64el. 204s Preparing to unpack .../28-libssw-dev_1.1-14build1_ppc64el.deb ... 204s Unpacking libssw-dev:ppc64el (1.1-14build1) ... 204s Selecting previously unselected package zlib1g-dev:ppc64el. 204s Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_ppc64el.deb ... 204s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ... 204s Selecting previously unselected package autopkgtest-satdep. 204s Preparing to unpack .../30-1-autopkgtest-satdep.deb ... 204s Unpacking autopkgtest-satdep (0) ... 204s Setting up libgomp1:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up gcc-13-base:ppc64el (13.2.0-23ubuntu4) ... 204s Setting up libquadmath0:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up libmpc3:ppc64el (1.3.1-1build1) ... 204s Setting up libatomic1:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up libubsan1:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ... 204s Setting up libasan8:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up libtsan2:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up libisl23:ppc64el (0.26-3build1) ... 204s Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 204s Setting up libssw0:ppc64el (1.1-14build1) ... 204s Setting up libcc1-0:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up liblsan0:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up libitm1:ppc64el (14.1.0-1ubuntu1) ... 204s Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 204s Setting up cpp-13 (13.2.0-23ubuntu4) ... 204s Setting up libssw-dev:ppc64el (1.1-14build1) ... 204s Setting up libgcc-13-dev:ppc64el (13.2.0-23ubuntu4) ... 204s Setting up cpp (4:13.2.0-7ubuntu1) ... 204s Setting up libstdc++-13-dev:ppc64el (13.2.0-23ubuntu4) ... 204s Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 204s Setting up gcc-13 (13.2.0-23ubuntu4) ... 204s Setting up g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu4) ... 204s Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 204s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 204s Setting up g++-13 (13.2.0-23ubuntu4) ... 204s Setting up gcc (4:13.2.0-7ubuntu1) ... 204s Setting up g++ (4:13.2.0-7ubuntu1) ... 204s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 204s Setting up build-essential (12.10ubuntu1) ... 204s Setting up autopkgtest-satdep (0) ... 204s Processing triggers for man-db (2.12.1-2) ... 205s Processing triggers for libc-bin (2.39-3.1ubuntu3) ... 207s (Reading database ... 73969 files and directories currently installed.) 207s Removing autopkgtest-satdep (0) ... 207s autopkgtest [21:53:56]: test build-lib: [----------------------- 208s optimal_alignment_score: 21 sub-optimal_alignment_score: 8 target_begin: 9 target_end: 22 query_begin: 1 query_end: 15 208s 208s Target: 9 CTGACCCGG-AAATC 22 208s ||||*||||*||||| 208s Query: 1 CTGAGCCGGTAAATC 15 208s 208s ===== SSW result ===== 208s Best Smith-Waterman score: 21 208s Next-best Smith-Waterman score: 8 208s Reference start: 8 208s Reference end: 21 208s Query start: 0 208s Query end: 14 208s Next-best reference end: 4 208s Number of mismatches: 2 208s Cigar: 4=1X4=1I5= 208s ====================== 209s autopkgtest [21:53:58]: test build-lib: -----------------------] 209s build-lib PASS 209s autopkgtest [21:53:58]: test build-lib: - - - - - - - - - - results - - - - - - - - - - 209s autopkgtest [21:53:58]: test build-lib-java: preparing testbed 344s autopkgtest [21:56:13]: testbed dpkg architecture: ppc64el 344s autopkgtest [21:56:13]: testbed apt version: 2.9.6 344s autopkgtest [21:56:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 345s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 345s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 345s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [46.5 kB] 345s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [360 kB] 345s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3288 B] 345s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [74.0 kB] 345s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2132 B] 345s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 345s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 345s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [365 kB] 345s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [9000 B] 345s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1788 B] 345s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 347s Fetched 997 kB in 1s (1154 kB/s) 347s Reading package lists... 349s Reading package lists... 350s Building dependency tree... 350s Reading state information... 350s Calculating upgrade... 350s The following packages will be upgraded: 350s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 350s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 350s Need to get 10.1 MB of archives. 350s After this operation, 1843 kB disk space will be freed. 350s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-devtools ppc64el 2.39-3.1ubuntu3 [29.5 kB] 350s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6-dev ppc64el 2.39-3.1ubuntu3 [1982 kB] 351s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-dev-bin ppc64el 2.39-3.1ubuntu3 [21.0 kB] 351s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6 ppc64el 2.39-3.1ubuntu3 [3174 kB] 351s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-bin ppc64el 2.39-3.1ubuntu3 [720 kB] 351s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el locales all 2.39-3.1ubuntu3 [4220 kB] 352s Preconfiguring packages ... 352s Fetched 10.1 MB in 1s (7660 kB/s) 352s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 352s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu3_ppc64el.deb ... 352s Unpacking libc-devtools (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 352s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu3_ppc64el.deb ... 352s Unpacking libc6-dev:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 352s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu3_ppc64el.deb ... 352s Unpacking libc-dev-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 352s Preparing to unpack .../libc6_2.39-3.1ubuntu3_ppc64el.deb ... 352s Unpacking libc6:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 352s Setting up libc6:ppc64el (2.39-3.1ubuntu3) ... 352s Error: Could not restart systemd, systemd binary not working 353s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 353s Preparing to unpack .../libc-bin_2.39-3.1ubuntu3_ppc64el.deb ... 353s Unpacking libc-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 353s Setting up libc-bin (2.39-3.1ubuntu3) ... 353s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 353s Preparing to unpack .../locales_2.39-3.1ubuntu3_all.deb ... 353s Unpacking locales (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 353s Setting up locales (2.39-3.1ubuntu3) ... 353s Generating locales (this might take a while)... 355s en_US.UTF-8... done 355s Generation complete. 355s Setting up libc-dev-bin (2.39-3.1ubuntu3) ... 355s Setting up libc-devtools (2.39-3.1ubuntu3) ... 355s Setting up libc6-dev:ppc64el (2.39-3.1ubuntu3) ... 355s Processing triggers for man-db (2.12.1-2) ... 356s Processing triggers for systemd (256-1ubuntu1) ... 357s Reading package lists... 357s Building dependency tree... 357s Reading state information... 357s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 357s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 357s Get:2 http://ftpmaster.internal/ubuntu oracular InRelease [121 kB] 358s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 358s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 358s Get:5 http://ftpmaster.internal/ubuntu oracular/universe Sources [20.3 MB] 360s Get:6 http://ftpmaster.internal/ubuntu oracular/main Sources [1388 kB] 360s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el Packages [1355 kB] 360s Get:8 http://ftpmaster.internal/ubuntu oracular/universe ppc64el Packages [15.1 MB] 361s Get:9 http://ftpmaster.internal/ubuntu oracular/universe ppc64el c-n-f Metadata [299 kB] 367s Fetched 38.6 MB in 8s (4895 kB/s) 368s Reading package lists... 368s Reading package lists... 368s Building dependency tree... 368s Reading state information... 368s Calculating upgrade... 368s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 368s Reading package lists... 368s Building dependency tree... 368s Reading state information... 369s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 372s Reading package lists... 373s Building dependency tree... 373s Reading state information... 373s Starting pkgProblemResolver with broken count: 0 373s Starting 2 pkgProblemResolver with broken count: 0 373s Done 373s The following additional packages will be installed: 373s ca-certificates-java default-jdk-headless default-jre-headless java-common 373s liblcms2-2 libpcsclite1 libssw-java openjdk-21-jdk-headless 373s openjdk-21-jre-headless 373s Suggested packages: 373s default-jre liblcms2-utils pcscd openjdk-21-demo openjdk-21-source 373s libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho 373s fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic 373s Recommended packages: 373s libcups2t64 libharfbuzz0b libasound2t64 373s The following NEW packages will be installed: 373s autopkgtest-satdep ca-certificates-java default-jdk-headless 373s default-jre-headless java-common liblcms2-2 libpcsclite1 libssw-java 373s openjdk-21-jdk-headless openjdk-21-jre-headless 373s 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 373s Need to get 128 MB/128 MB of archives. 373s After this operation, 301 MB of additional disk space will be used. 373s Get:1 /tmp/autopkgtest.FerihY/2-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [724 B] 374s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el ca-certificates-java all 20240118 [11.6 kB] 374s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el java-common all 0.75+exp1 [6798 B] 374s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblcms2-2 ppc64el 2.14-2build1 [233 kB] 374s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpcsclite1 ppc64el 2.2.3-1 [30.7 kB] 374s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el openjdk-21-jre-headless ppc64el 21.0.4~6ea-1ubuntu1 [45.8 MB] 376s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el default-jre-headless ppc64el 2:1.21-75+exp1 [3102 B] 376s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el openjdk-21-jdk-headless ppc64el 21.0.4~6ea-1ubuntu1 [82.0 MB] 382s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el default-jdk-headless ppc64el 2:1.21-75+exp1 [968 B] 382s Get:10 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libssw-java ppc64el 1.1-14build1 [20.7 kB] 383s Fetched 128 MB in 9s (14.4 MB/s) 383s Selecting previously unselected package ca-certificates-java. 383s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 383s Preparing to unpack .../0-ca-certificates-java_20240118_all.deb ... 383s Unpacking ca-certificates-java (20240118) ... 383s Selecting previously unselected package java-common. 383s Preparing to unpack .../1-java-common_0.75+exp1_all.deb ... 383s Unpacking java-common (0.75+exp1) ... 383s Selecting previously unselected package liblcms2-2:ppc64el. 383s Preparing to unpack .../2-liblcms2-2_2.14-2build1_ppc64el.deb ... 383s Unpacking liblcms2-2:ppc64el (2.14-2build1) ... 383s Selecting previously unselected package libpcsclite1:ppc64el. 383s Preparing to unpack .../3-libpcsclite1_2.2.3-1_ppc64el.deb ... 383s Unpacking libpcsclite1:ppc64el (2.2.3-1) ... 383s Selecting previously unselected package openjdk-21-jre-headless:ppc64el. 383s Preparing to unpack .../4-openjdk-21-jre-headless_21.0.4~6ea-1ubuntu1_ppc64el.deb ... 383s Unpacking openjdk-21-jre-headless:ppc64el (21.0.4~6ea-1ubuntu1) ... 384s Selecting previously unselected package default-jre-headless. 384s Preparing to unpack .../5-default-jre-headless_2%3a1.21-75+exp1_ppc64el.deb ... 384s Unpacking default-jre-headless (2:1.21-75+exp1) ... 384s Selecting previously unselected package openjdk-21-jdk-headless:ppc64el. 384s Preparing to unpack .../6-openjdk-21-jdk-headless_21.0.4~6ea-1ubuntu1_ppc64el.deb ... 384s Unpacking openjdk-21-jdk-headless:ppc64el (21.0.4~6ea-1ubuntu1) ... 385s Selecting previously unselected package default-jdk-headless. 385s Preparing to unpack .../7-default-jdk-headless_2%3a1.21-75+exp1_ppc64el.deb ... 385s Unpacking default-jdk-headless (2:1.21-75+exp1) ... 385s Selecting previously unselected package libssw-java. 385s Preparing to unpack .../8-libssw-java_1.1-14build1_ppc64el.deb ... 385s Unpacking libssw-java (1.1-14build1) ... 385s Selecting previously unselected package autopkgtest-satdep. 385s Preparing to unpack .../9-2-autopkgtest-satdep.deb ... 385s Unpacking autopkgtest-satdep (0) ... 385s Setting up liblcms2-2:ppc64el (2.14-2build1) ... 385s Setting up java-common (0.75+exp1) ... 385s Setting up libssw-java (1.1-14build1) ... 385s Setting up libpcsclite1:ppc64el (2.2.3-1) ... 385s Setting up ca-certificates-java (20240118) ... 385s No JRE found. Skipping Java certificates setup. 385s Setting up openjdk-21-jre-headless:ppc64el (21.0.4~6ea-1ubuntu1) ... 385s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/java to provide /usr/bin/java (java) in auto mode 385s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 385s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 385s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 385s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 385s Processing triggers for libc-bin (2.39-3.1ubuntu3) ... 385s Processing triggers for man-db (2.12.1-2) ... 385s Processing triggers for ca-certificates-java (20240118) ... 386s Adding debian:ACCVRAIZ1.pem 386s Adding debian:AC_RAIZ_FNMT-RCM.pem 386s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 386s Adding debian:ANF_Secure_Server_Root_CA.pem 386s Adding debian:Actalis_Authentication_Root_CA.pem 386s Adding debian:AffirmTrust_Commercial.pem 386s Adding debian:AffirmTrust_Networking.pem 386s Adding debian:AffirmTrust_Premium.pem 386s Adding debian:AffirmTrust_Premium_ECC.pem 386s Adding debian:Amazon_Root_CA_1.pem 386s Adding debian:Amazon_Root_CA_2.pem 386s Adding debian:Amazon_Root_CA_3.pem 386s Adding debian:Amazon_Root_CA_4.pem 386s Adding debian:Atos_TrustedRoot_2011.pem 386s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 386s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 386s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 386s Adding debian:BJCA_Global_Root_CA1.pem 386s Adding debian:BJCA_Global_Root_CA2.pem 386s Adding debian:Baltimore_CyberTrust_Root.pem 386s Adding debian:Buypass_Class_2_Root_CA.pem 386s Adding debian:Buypass_Class_3_Root_CA.pem 386s Adding debian:CA_Disig_Root_R2.pem 386s Adding debian:CFCA_EV_ROOT.pem 386s Adding debian:COMODO_Certification_Authority.pem 386s Adding debian:COMODO_ECC_Certification_Authority.pem 386s Adding debian:COMODO_RSA_Certification_Authority.pem 386s Adding debian:Certainly_Root_E1.pem 386s Adding debian:Certainly_Root_R1.pem 386s Adding debian:Certigna.pem 386s Adding debian:Certigna_Root_CA.pem 386s Adding debian:Certum_EC-384_CA.pem 386s Adding debian:Certum_Trusted_Network_CA.pem 386s Adding debian:Certum_Trusted_Network_CA_2.pem 386s Adding debian:Certum_Trusted_Root_CA.pem 386s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 386s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 386s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 386s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 386s Adding debian:Comodo_AAA_Services_root.pem 386s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 386s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 386s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 386s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 386s Adding debian:DigiCert_Assured_ID_Root_CA.pem 386s Adding debian:DigiCert_Assured_ID_Root_G2.pem 386s Adding debian:DigiCert_Assured_ID_Root_G3.pem 386s Adding debian:DigiCert_Global_Root_CA.pem 386s Adding debian:DigiCert_Global_Root_G2.pem 386s Adding debian:DigiCert_Global_Root_G3.pem 386s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 386s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 386s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 386s Adding debian:DigiCert_Trusted_Root_G4.pem 386s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 386s Adding debian:Entrust_Root_Certification_Authority.pem 386s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 386s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 386s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 386s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 386s Adding debian:GLOBALTRUST_2020.pem 386s Adding debian:GTS_Root_R1.pem 386s Adding debian:GTS_Root_R2.pem 386s Adding debian:GTS_Root_R3.pem 386s Adding debian:GTS_Root_R4.pem 386s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 386s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 386s Adding debian:GlobalSign_Root_CA.pem 386s Adding debian:GlobalSign_Root_CA_-_R3.pem 386s Adding debian:GlobalSign_Root_CA_-_R6.pem 386s Adding debian:GlobalSign_Root_E46.pem 386s Adding debian:GlobalSign_Root_R46.pem 386s Adding debian:Go_Daddy_Class_2_CA.pem 386s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 386s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 386s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 386s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 386s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 386s Adding debian:HiPKI_Root_CA_-_G1.pem 386s Adding debian:Hongkong_Post_Root_CA_3.pem 386s Adding debian:ISRG_Root_X1.pem 386s Adding debian:ISRG_Root_X2.pem 386s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 386s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 386s Adding debian:Izenpe.com.pem 386s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 386s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 386s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 386s Adding debian:NAVER_Global_Root_Certification_Authority.pem 386s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 386s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 386s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 386s Adding debian:QuoVadis_Root_CA_1_G3.pem 386s Adding debian:QuoVadis_Root_CA_2.pem 386s Adding debian:QuoVadis_Root_CA_2_G3.pem 386s Adding debian:QuoVadis_Root_CA_3.pem 386s Adding debian:QuoVadis_Root_CA_3_G3.pem 386s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 386s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 386s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 386s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 386s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 386s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 386s Adding debian:SZAFIR_ROOT_CA2.pem 386s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 386s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 386s Adding debian:SecureSign_RootCA11.pem 386s Adding debian:SecureTrust_CA.pem 386s Adding debian:Secure_Global_CA.pem 386s Adding debian:Security_Communication_ECC_RootCA1.pem 386s Adding debian:Security_Communication_RootCA2.pem 386s Adding debian:Security_Communication_RootCA3.pem 386s Adding debian:Security_Communication_Root_CA.pem 386s Adding debian:Starfield_Class_2_CA.pem 386s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 386s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 386s Adding debian:SwissSign_Gold_CA_-_G2.pem 386s Adding debian:SwissSign_Silver_CA_-_G2.pem 386s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 386s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 386s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 386s Adding debian:TWCA_Global_Root_CA.pem 386s Adding debian:TWCA_Root_Certification_Authority.pem 386s Adding debian:TeliaSonera_Root_CA_v1.pem 386s Adding debian:Telia_Root_CA_v2.pem 386s Adding debian:TrustAsia_Global_Root_CA_G3.pem 386s Adding debian:TrustAsia_Global_Root_CA_G4.pem 386s Adding debian:Trustwave_Global_Certification_Authority.pem 386s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 386s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 386s Adding debian:TunTrust_Root_CA.pem 386s Adding debian:UCA_Extended_Validation_Root.pem 386s Adding debian:UCA_Global_G2_Root.pem 386s Adding debian:USERTrust_ECC_Certification_Authority.pem 386s Adding debian:USERTrust_RSA_Certification_Authority.pem 386s Adding debian:XRamp_Global_CA_Root.pem 386s Adding debian:certSIGN_ROOT_CA.pem 386s Adding debian:certSIGN_Root_CA_G2.pem 386s Adding debian:e-Szigno_Root_CA_2017.pem 386s Adding debian:ePKI_Root_Certification_Authority.pem 386s Adding debian:emSign_ECC_Root_CA_-_C3.pem 386s Adding debian:emSign_ECC_Root_CA_-_G3.pem 386s Adding debian:emSign_Root_CA_-_C1.pem 386s Adding debian:emSign_Root_CA_-_G1.pem 386s Adding debian:vTrus_ECC_Root_CA.pem 386s Adding debian:vTrus_Root_CA.pem 386s done. 386s Setting up openjdk-21-jdk-headless:ppc64el (21.0.4~6ea-1ubuntu1) ... 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jar to provide /usr/bin/jar (jar) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javac to provide /usr/bin/javac (javac) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/javap to provide /usr/bin/javap (javap) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jps to provide /usr/bin/jps (jps) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode 386s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode 386s Setting up default-jre-headless (2:1.21-75+exp1) ... 386s Setting up default-jdk-headless (2:1.21-75+exp1) ... 386s Setting up autopkgtest-satdep (0) ... 388s (Reading database ... 73243 files and directories currently installed.) 388s Removing autopkgtest-satdep (0) ... 406s autopkgtest [21:57:15]: test build-lib-java: [----------------------- 408s Aligning nucleotides 408s score1=21 score2=8 ref_begin1=8 ref_end1=21 read_begin1=0 read_end1=14 ref_end2=4 cigar=9M1I5M 408s autopkgtest [21:57:17]: test build-lib-java: -----------------------] 409s autopkgtest [21:57:18]: test build-lib-java: - - - - - - - - - - results - - - - - - - - - - 409s build-lib-java PASS 409s autopkgtest [21:57:18]: test run-example: preparing testbed 539s autopkgtest [21:59:28]: testbed dpkg architecture: ppc64el 539s autopkgtest [21:59:28]: testbed apt version: 2.9.6 539s autopkgtest [21:59:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 540s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 541s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3288 B] 541s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [46.5 kB] 541s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 541s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [360 kB] 541s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [74.0 kB] 541s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2132 B] 541s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 541s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 541s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [365 kB] 541s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [9000 B] 541s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1788 B] 541s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 543s Fetched 997 kB in 1s (1205 kB/s) 543s Reading package lists... 545s Reading package lists... 545s Building dependency tree... 545s Reading state information... 545s Calculating upgrade... 545s The following packages will be upgraded: 545s libc-bin libc-dev-bin libc-devtools libc6 libc6-dev locales 546s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 546s Need to get 10.1 MB of archives. 546s After this operation, 1843 kB disk space will be freed. 546s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-devtools ppc64el 2.39-3.1ubuntu3 [29.5 kB] 546s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6-dev ppc64el 2.39-3.1ubuntu3 [1982 kB] 547s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-dev-bin ppc64el 2.39-3.1ubuntu3 [21.0 kB] 547s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc6 ppc64el 2.39-3.1ubuntu3 [3174 kB] 548s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el libc-bin ppc64el 2.39-3.1ubuntu3 [720 kB] 548s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el locales all 2.39-3.1ubuntu3 [4220 kB] 549s Preconfiguring packages ... 549s Fetched 10.1 MB in 3s (3204 kB/s) 549s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 549s Preparing to unpack .../libc-devtools_2.39-3.1ubuntu3_ppc64el.deb ... 549s Unpacking libc-devtools (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 549s Preparing to unpack .../libc6-dev_2.39-3.1ubuntu3_ppc64el.deb ... 549s Unpacking libc6-dev:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 549s Preparing to unpack .../libc-dev-bin_2.39-3.1ubuntu3_ppc64el.deb ... 549s Unpacking libc-dev-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 549s Preparing to unpack .../libc6_2.39-3.1ubuntu3_ppc64el.deb ... 549s Unpacking libc6:ppc64el (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 550s Setting up libc6:ppc64el (2.39-3.1ubuntu3) ... 550s Error: Could not restart systemd, systemd binary not working 550s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 550s Preparing to unpack .../libc-bin_2.39-3.1ubuntu3_ppc64el.deb ... 550s Unpacking libc-bin (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 550s Setting up libc-bin (2.39-3.1ubuntu3) ... 550s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 550s Preparing to unpack .../locales_2.39-3.1ubuntu3_all.deb ... 550s Unpacking locales (2.39-3.1ubuntu3) over (2.39-0ubuntu9) ... 550s Setting up locales (2.39-3.1ubuntu3) ... 551s Generating locales (this might take a while)... 552s en_US.UTF-8... done 552s Generation complete. 552s Setting up libc-dev-bin (2.39-3.1ubuntu3) ... 552s Setting up libc-devtools (2.39-3.1ubuntu3) ... 552s Setting up libc6-dev:ppc64el (2.39-3.1ubuntu3) ... 552s Processing triggers for man-db (2.12.1-2) ... 553s Processing triggers for systemd (256-1ubuntu1) ... 554s Reading package lists... 554s Building dependency tree... 554s Reading state information... 554s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 555s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 555s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 555s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 555s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 556s Reading package lists... 556s Reading package lists... 556s Building dependency tree... 556s Reading state information... 556s Calculating upgrade... 556s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 556s Reading package lists... 556s Building dependency tree... 556s Reading state information... 557s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 560s Reading package lists... 561s Building dependency tree... 561s Reading state information... 561s Starting pkgProblemResolver with broken count: 0 561s Starting 2 pkgProblemResolver with broken count: 0 561s Done 561s The following additional packages will be installed: 561s libssw0 ssw-align 561s The following NEW packages will be installed: 561s autopkgtest-satdep libssw0 ssw-align 561s 0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. 561s Need to get 49.6 kB/50.3 kB of archives. 561s After this operation, 170 kB of additional disk space will be used. 561s Get:1 /tmp/autopkgtest.FerihY/3-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [708 B] 561s Get:2 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libssw0 ppc64el 1.1-14build1 [24.5 kB] 561s Get:3 http://ftpmaster.internal/ubuntu oracular/universe ppc64el ssw-align ppc64el 1.1-14build1 [25.1 kB] 562s Fetched 49.6 kB in 0s (167 kB/s) 562s Selecting previously unselected package libssw0:ppc64el. 562s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72764 files and directories currently installed.) 562s Preparing to unpack .../libssw0_1.1-14build1_ppc64el.deb ... 562s Unpacking libssw0:ppc64el (1.1-14build1) ... 562s Selecting previously unselected package ssw-align. 562s Preparing to unpack .../ssw-align_1.1-14build1_ppc64el.deb ... 562s Unpacking ssw-align (1.1-14build1) ... 562s Selecting previously unselected package autopkgtest-satdep. 562s Preparing to unpack .../3-autopkgtest-satdep.deb ... 562s Unpacking autopkgtest-satdep (0) ... 562s Setting up libssw0:ppc64el (1.1-14build1) ... 562s Setting up ssw-align (1.1-14build1) ... 562s Setting up autopkgtest-satdep (0) ... 562s Processing triggers for man-db (2.12.1-2) ... 562s Processing triggers for libc-bin (2.39-3.1ubuntu3) ... 564s (Reading database ... 72776 files and directories currently installed.) 564s Removing autopkgtest-satdep (0) ... 567s autopkgtest [21:59:56]: test run-example: [----------------------- 579s target_name: chr1 579s query_name: chr1 579s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 579s 579s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 579s 579s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 579s 579s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 579s 579s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 579s 579s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 579s 579s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 579s 579s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 579s 579s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 579s 579s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 579s 579s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 579s 579s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 579s 579s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 579s 579s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 579s 579s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 579s 579s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 579s 579s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 579s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 579s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 579s 579s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 579s ||||||||||||||||||||||||||||||||||||||||| 579s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 579s 579s target_name: chr2 579s query_name: chr1 579s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 579s 579s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 579s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 579s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 579s 579s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 579s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 579s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 579s 579s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 579s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 579s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 579s 579s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 579s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 579s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 579s 579s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 579s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 579s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 579s 579s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 579s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 579s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 579s 579s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 579s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 579s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 579s 579s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 579s | *||*||||||| ||**| | |||||||| |*||| ||| 579s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 579s 579s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 579s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 579s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 579s 579s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 579s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 579s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 579s 579s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 579s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 579s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 579s 579s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 579s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 579s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 579s 579s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 579s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 579s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 579s 579s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 581s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 581s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 581s 581s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 581s || || || |||| || || || |||*|||| |||| |*|| || ||| || 581s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 581s 581s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 581s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 581s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 581s 581s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 581s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 581s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 581s 581s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 581s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 581s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 581s 581s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 581s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 581s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 581s 581s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 581s *||||| |*|||*||||| 581s Query: 955 --TACTTC-TAATTTTTCAC 971 581s 581s target_name: chr3 581s query_name: chr1 581s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 581s 581s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 581s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 581s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 581s 581s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 581s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 581s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 581s 581s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 581s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 581s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 581s 581s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 581s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 581s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 581s 581s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 581s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 581s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 581s 581s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 581s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 581s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 581s 581s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 581s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 581s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 581s 581s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 581s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 581s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 581s 581s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 581s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 581s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 581s 581s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 581s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 581s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 581s 581s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 581s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 581s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 581s 581s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 581s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 581s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 581s 581s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 581s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 581s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 581s 581s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 581s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 581s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 581s 581s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 581s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 581s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 581s 581s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 581s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 581s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 581s 581s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 581s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 581s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 581s 581s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 581s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 581s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 581s 581s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 581s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 581s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 581s 581s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 581s *|||| |*|||||*||| || |*|||*||*|| 581s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 581s 581s target_name: chr4 581s query_name: chr1 581s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 581s 581s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 581s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 581s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 581s 581s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 581s ||| || |||***||| |||| |||| |||| || ||| || 581s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 581s 581s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 581s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 581s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 581s 581s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 581s || |||| ||||||| || |*|||||*||||*|*|| 581s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 581s 581s Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 581s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 581s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 581s 581s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 581s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 581s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 581s 581s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 581s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 581s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 581s 581s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 581s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 581s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 581s 581s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 581s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 581s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 581s 581s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 581s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 581s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 581s 581s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 581s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 581s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 581s 581s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 581s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 581s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 581s 581s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 581s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 581s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 581s 581s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 581s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 581s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 581s 581s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 581s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 581s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 581s 581s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 581s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 581s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 581s 581s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 581s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 581s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 581s 581s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 581s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 581s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 581s 581s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 581s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 581s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 581s 581s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 581s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 581s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 581s 581s Target: 48049 GAA---AT--AAAGTA 48059 581s ||| || ||| || 581s Query: 987 GAATGGATCCAAA-TA 1001 581s 581s target_name: chr5 581s query_name: chr1 581s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 581s 581s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 581s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 581s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 581s 581s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 581s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 581s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 581s 581s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 581s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 581s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 581s 581s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 581s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 581s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 581s 581s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 581s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 581s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 581s 581s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 581s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 581s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 581s 581s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 581s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 581s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 581s 581s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 581s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 581s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 581s 581s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 581s | |||||| ||||*|| | || | ||| |*||*||| || 581s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 581s 581s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 581s |||****| |||| |*|*|***|||*| ||*|*| ||| || 581s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 581s 581s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 581s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 581s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 581s 581s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 581s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 581s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 581s 581s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 581s | | || |||| ||||| |*|| |||| ||||*||| |||| || 581s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 581s 581s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 581s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 581s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 581s 581s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 581s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 581s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 581s 581s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 581s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 581s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 581s 581s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 581s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 581s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 581s 581s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 581s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 581s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 581s 581s Target: 9707 TGTTGATTGTTTC-CTTT 9723 581s |**|*||| |||| |||| 581s Query: 958 TTCTAATT-TTTCACTTT 974 581s 581s CPU time: 13.644268 seconds 593s target_name: chr1 593s query_name: chr1 593s optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001 593s 593s Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60 593s 593s Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 593s 593s Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180 593s 593s Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240 593s 593s Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300 593s 593s Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360 593s 593s Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420 593s 593s Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480 593s 593s Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540 593s 593s Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600 593s 593s Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660 593s 593s Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720 593s 593s Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780 593s 593s Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840 593s 593s Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900 593s 593s Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 593s |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 593s Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960 593s 593s Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 593s ||||||||||||||||||||||||||||||||||||||||| 593s Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001 593s 593s target_name: chr2 593s query_name: chr1 593s optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971 593s 593s Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488 593s ||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| ||| 593s Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56 593s 593s Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543 593s |||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**| 593s Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104 593s 593s Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599 593s ||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| || 593s Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156 593s 593s Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655 593s ||**||| | ||| || |||| *||| ||*| *|||| |*||*||| || 593s Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200 593s 593s Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707 593s |||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |* 593s Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254 593s 593s Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752 593s ||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*| 593s Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312 593s 593s Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806 593s ||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*| 593s Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363 593s 593s Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846 593s | *||*||||||| ||**| | |||||||| |*||| ||| 593s Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417 593s 593s Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898 593s ||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**||| 593s Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475 593s 593s Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949 593s | |*|| || |*||**| *| || |||**|||*|*|| |||***|*|** 593s Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526 593s 593s Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004 593s *|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *| 593s Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581 593s 593s Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063 593s ||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**|| 593s Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627 593s 593s Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123 593s *|**|||*|***|||||| |**|*| || || || | ||*||*|*|| 593s Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668 593s 593s Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173 594s ||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| |||| 594s Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723 594s 594s Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221 594s || || || |||| || || || |||*|||| |||| |*|| || ||| || 594s Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774 594s 594s Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278 594s || || |*|*|*||*||||| | ||*|| || |||*|*|| | || || 594s Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816 594s 594s Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335 594s |**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||* 594s Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870 594s 594s Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392 594s |*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| || 594s Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913 594s 594s Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450 594s *|| | ||*||| ||*|*||||||||| || *|||| | *|| *||| 594s Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954 594s 594s Target: 4438451 GACACTTCTTTATTATTCAC 4438470 594s *||||| |*|||*||||| 594s Query: 955 --TACTTC-TAATTTTTCAC 971 594s 594s target_name: chr3 594s query_name: chr1 594s optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998 594s 594s Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026 594s || |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |* 594s Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53 594s 594s Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070 594s *|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |* 594s Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111 594s 594s Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126 594s |||| ||*||| |*|||**||*| || |||*||**||||| |||| || 594s Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157 594s 594s Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180 594s |**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| | 594s Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207 594s 594s Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233 594s *||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*|| 594s Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263 594s 594s Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280 594s | *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| | 594s Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318 594s 594s Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334 594s *|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***| 594s Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370 594s 594s Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386 594s *||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| ||||| 594s Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426 594s 594s Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446 594s ||| |*||***||||||**||| || |||| ||*|*| | |*||||*| | 594s Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469 594s 594s Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505 594s ***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****|||| 594s Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517 594s 594s Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547 594s | |||| | |||| || *| || |||| |||| |*||*|||| *|* 594s Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571 594s 594s Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596 594s *|**||| *||| |||**|*|| ||||*| *|||| |*|*||| ||||| 594s Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625 594s 594s Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636 594s ||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| || 594s Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683 594s 594s Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690 594s |||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*|| 594s Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735 594s 594s Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748 594s *||*|*|||||| |||| |*| | ||| || |||||**| || *| 594s Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774 594s 594s Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803 594s |*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*||| 594s Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827 594s 594s Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861 594s |||| |*|*|**|*| || |||| ||| || || *|*| || |||| | 594s Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867 594s 594s Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914 594s ||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*| 594s Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916 594s 594s Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971 594s |||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*| 594s Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964 594s 594s Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002 594s *|||| |*|||||*||| || |*|||*||*|| 594s Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998 594s 594s target_name: chr4 594s query_name: chr1 594s optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001 594s 594s Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050 594s |||||**|| ||*||*|| || | *|*| || ||||||| || || || | 594s Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50 594s 594s Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104 594s ||| || |||***||| |||| |||| |||| || ||| || 594s Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89 594s 594s Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159 594s || |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| | 594s Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138 594s 594s Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219 594s || |||| ||||||| || |*|||||*||||*|*|| 594s Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170 594s 594s Target: 47220 --ATG--TTAAAA-----TATAC--ACPU time: 13.533839 seconds 594s TTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264 594s ||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*| 594s Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226 594s 594s Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312 594s ||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**|| 594s Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284 594s 594s Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365 594s | | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*| 594s Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335 594s 594s Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419 594s ||*| *||*|||| |||||**|| ||||*|||*|**|||| 594s Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378 594s 594s Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471 594s *||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*| 594s Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434 594s 594s Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525 594s | | |**|||| *||*||||||*|*||***||||| |***|||| |||| 594s Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484 594s 594s Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575 594s *|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*|||| 594s Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536 594s 594s Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620 594s | *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*||| 594s Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591 594s 594s Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669 594s || *|||| | || |**|**|| ||*|**| |*||| ||||||*|**| 594s Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643 594s 594s Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728 594s ||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| |||| 594s Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691 594s 594s Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776 594s |||||| ||***|| || ||| | *||||*||| |*||**||||**|| || 594s Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747 594s 594s Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836 594s |||*|*||||*|| |*|*|||| |||*||| ***|||||||| || || 594s Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790 594s 594s Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878 594s |||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*| 594s Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848 594s 594s Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935 594s |||| || ||*|*|||*|| |*|||||| |||| |**|||||||*||| 594s Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894 594s 594s Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993 594s || | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*| 594s Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939 594s 594s Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048 594s ||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| | 594s Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986 594s 594s Target: 48049 GAA---AT--AAAGTA 48059 594s ||| || ||| || 594s Query: 987 GAATGGATCCAAA-TA 1001 594s 594s target_name: chr5 594s query_name: chr1 594s optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974 594s 594s Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863 594s |||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*||| 594s Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64 594s 594s Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911 594s ||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| | 594s Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120 594s 594s Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955 594s *|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| * 594s Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179 594s 594s Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013 594s || |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|* 594s Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226 594s 594s Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063 594s | |*||**|*||||| *||||| *||||| || ||| |**||||| || *|||| 594s Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282 594s 594s Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109 594s *|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| |||| 594s Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335 594s 594s Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147 594s |||*||| ||*|| | |||| ||| *||| *||||| |**||| 594s Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393 594s 594s Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197 594s ||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*| 594s Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448 594s 594s Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229 594s | |||||| ||||*|| | || | ||| |*||*||| || 594s Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507 594s 594s Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270 594s |||****| |||| |*|*|***|||*| ||*|*| ||| || 594s Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562 594s 594s Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329 594s *||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*| 594s Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615 594s 594s Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383 594s *||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*||| 594s Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673 594s 594s Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421 594s | | || |||| ||||| |*|| |||| ||||*||| |||| || 594s Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730 594s 594s Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473 594s || ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*| 594s Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778 594s 594s Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531 594s ||**|| |||*||||*||*|*| | *|||||**|*||*| || ||*|*||||*|| 594s Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830 594s 594s Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591 594s ||*|*||||**||||*| || |*|| |||||**||*|| | ||| 594s Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869 594s 594s Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650 594s *||| || |||*| || *||**||| || ||| ||*|| | ||| | 594s Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906 594s 594s Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706 594s |||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *|| 594s Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957 594s 594s Target: 9707 TGTTGATTGTTTC-CTTT 9723 594s |**|*||| |||| |||| 594s Query: 958 TTCTAATT-TTTCACTTT 974 594s 595s autopkgtest [22:00:24]: test run-example: -----------------------] 595s autopkgtest [22:00:24]: test run-example: - - - - - - - - - - results - - - - - - - - - - 595s run-example PASS 596s autopkgtest [22:00:25]: @@@@@@@@@@@@@@@@@@@@ summary 596s build-lib PASS 596s build-lib-java PASS 596s run-example PASS 610s nova [W] Using flock in scalingstack-bos01-ppc64el 610s Creating nova instance adt-oracular-ppc64el-libssw-20240712-215029-juju-7f2275-prod-proposed-migration-environment-2-7c102ad3-0bd0-49b9-9eea-9b796a4c012b from image adt/ubuntu-oracular-ppc64el-server-20240712.img (UUID e4c6542a-b9ef-49c1-bc2b-ea42345fa49a)... 610s nova [W] Using flock in scalingstack-bos01-ppc64el 610s Creating nova instance adt-oracular-ppc64el-libssw-20240712-215029-juju-7f2275-prod-proposed-migration-environment-2-7c102ad3-0bd0-49b9-9eea-9b796a4c012b from image adt/ubuntu-oracular-ppc64el-server-20240712.img (UUID e4c6542a-b9ef-49c1-bc2b-ea42345fa49a)... 610s nova [W] Using flock in scalingstack-bos01-ppc64el 610s Creating nova instance adt-oracular-ppc64el-libssw-20240712-215029-juju-7f2275-prod-proposed-migration-environment-2-7c102ad3-0bd0-49b9-9eea-9b796a4c012b from image adt/ubuntu-oracular-ppc64el-server-20240712.img (UUID e4c6542a-b9ef-49c1-bc2b-ea42345fa49a)...