0s autopkgtest [02:21:30]: starting date and time: 2024-07-27 02:21:30+0000 0s autopkgtest [02:21:30]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [02:21:30]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.rk7o2l58/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:ncbi-blast+ --apt-upgrade cct --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=ncbi-blast+/2.16.0+ds-3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-9.secgroup --name adt-oracular-ppc64el-cct-20240727-022130-juju-7f2275-prod-proposed-migration-environment-2-37aa1166-b02f-49d9-88df-ad46eeac9ad4 --image adt/ubuntu-oracular-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 140s autopkgtest [02:23:50]: testbed dpkg architecture: ppc64el 140s autopkgtest [02:23:50]: testbed apt version: 2.9.6 140s autopkgtest [02:23:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup 141s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 141s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4288 B] 141s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [401 kB] 141s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 141s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [51.2 kB] 141s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el Packages [75.9 kB] 141s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main ppc64el c-n-f Metadata [2116 B] 141s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el Packages [1368 B] 141s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted ppc64el c-n-f Metadata [120 B] 141s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el Packages [355 kB] 141s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el c-n-f Metadata [8952 B] 141s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el Packages [1448 B] 141s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse ppc64el c-n-f Metadata [120 B] 145s Fetched 1035 kB in 1s (1203 kB/s) 145s Reading package lists... 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s Calculating upgrade... 147s The following packages will be upgraded: 147s binutils binutils-common binutils-powerpc64le-linux-gnu bpftrace libbinutils 147s libclang-cpp18 libclang1-18 libctf-nobfd0 libctf0 libllvm18 libsframe1 148s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 148s Need to get 68.3 MB of archives. 148s After this operation, 73.7 kB of additional disk space will be used. 148s Get:1 http://ftpmaster.internal/ubuntu oracular/main ppc64el libctf0 ppc64el 2.42.90.20240720-2ubuntu1 [113 kB] 148s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el libctf-nobfd0 ppc64el 2.42.90.20240720-2ubuntu1 [113 kB] 148s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.42.90.20240720-2ubuntu1 [2493 kB] 148s Get:4 http://ftpmaster.internal/ubuntu oracular/main ppc64el libbinutils ppc64el 2.42.90.20240720-2ubuntu1 [702 kB] 148s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el binutils ppc64el 2.42.90.20240720-2ubuntu1 [3090 B] 148s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el binutils-common ppc64el 2.42.90.20240720-2ubuntu1 [221 kB] 148s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el libsframe1 ppc64el 2.42.90.20240720-2ubuntu1 [15.8 kB] 148s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el libclang-cpp18 ppc64el 1:18.1.8-4ubuntu1 [14.4 MB] 149s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el libllvm18 ppc64el 1:18.1.8-4ubuntu1 [28.6 MB] 150s Get:10 http://ftpmaster.internal/ubuntu oracular/main ppc64el libclang1-18 ppc64el 1:18.1.8-4ubuntu1 [8653 kB] 150s Get:11 http://ftpmaster.internal/ubuntu oracular/main ppc64el bpftrace ppc64el 0.21.2-1ubuntu1 [12.9 MB] 151s Fetched 68.3 MB in 3s (21.6 MB/s) 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72808 files and directories currently installed.) 151s Preparing to unpack .../00-libctf0_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking libctf0:ppc64el (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../01-libctf-nobfd0_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking libctf-nobfd0:ppc64el (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../02-binutils-powerpc64le-linux-gnu_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking binutils-powerpc64le-linux-gnu (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../03-libbinutils_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking libbinutils:ppc64el (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../04-binutils_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking binutils (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../05-binutils-common_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking binutils-common:ppc64el (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 151s Preparing to unpack .../06-libsframe1_2.42.90.20240720-2ubuntu1_ppc64el.deb ... 151s Unpacking libsframe1:ppc64el (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 152s Preparing to unpack .../07-libclang-cpp18_1%3a18.1.8-4ubuntu1_ppc64el.deb ... 152s Unpacking libclang-cpp18 (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 152s Preparing to unpack .../08-libllvm18_1%3a18.1.8-4ubuntu1_ppc64el.deb ... 152s Unpacking libllvm18:ppc64el (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 153s Preparing to unpack .../09-libclang1-18_1%3a18.1.8-4ubuntu1_ppc64el.deb ... 153s Unpacking libclang1-18 (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 153s Preparing to unpack .../10-bpftrace_0.21.2-1ubuntu1_ppc64el.deb ... 153s Unpacking bpftrace (0.21.2-1ubuntu1) over (0.21.0-1ubuntu6) ... 154s Setting up binutils-common:ppc64el (2.42.90.20240720-2ubuntu1) ... 154s Setting up libctf-nobfd0:ppc64el (2.42.90.20240720-2ubuntu1) ... 154s Setting up libsframe1:ppc64el (2.42.90.20240720-2ubuntu1) ... 154s Setting up libbinutils:ppc64el (2.42.90.20240720-2ubuntu1) ... 154s Setting up libllvm18:ppc64el (1:18.1.8-4ubuntu1) ... 154s Setting up libctf0:ppc64el (2.42.90.20240720-2ubuntu1) ... 154s Setting up libclang1-18 (1:18.1.8-4ubuntu1) ... 154s Setting up bpftrace (0.21.2-1ubuntu1) ... 154s Setting up binutils-powerpc64le-linux-gnu (2.42.90.20240720-2ubuntu1) ... 154s Setting up libclang-cpp18 (1:18.1.8-4ubuntu1) ... 154s Setting up binutils (2.42.90.20240720-2ubuntu1) ... 154s Processing triggers for libc-bin (2.39-0ubuntu9) ... 154s Processing triggers for man-db (2.12.1-2) ... 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 157s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 157s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 157s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 158s Reading package lists... 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Calculating upgrade... 159s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s autopkgtest [02:24:12]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP Sat Apr 20 00:05:55 UTC 2024 162s autopkgtest [02:24:12]: @@@@@@@@@@@@@@@@@@@@ apt-source cct 166s Get:1 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (dsc) [1997 B] 166s Get:2 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (tar) [81.7 MB] 166s Get:3 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (diff) [11.7 kB] 167s gpgv: Signature made Sun Jan 16 15:11:18 2022 UTC 167s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 167s gpgv: issuer "tille@debian.org" 167s gpgv: Can't check signature: No public key 167s dpkg-source: warning: cannot verify inline signature for ./cct_1.0.3-1.dsc: no acceptable signature found 172s autopkgtest [02:24:22]: testing package cct version 1:1.0.3-1 172s autopkgtest [02:24:22]: build not needed 179s autopkgtest [02:24:29]: test run-unit-test: preparing testbed 180s Reading package lists... 181s Building dependency tree... 181s Reading state information... 181s Starting pkgProblemResolver with broken count: 0 181s Starting 2 pkgProblemResolver with broken count: 0 181s Done 181s The following additional packages will be installed: 181s adwaita-icon-theme at-spi2-common bioperl ca-certificates-java cct 181s cct-examples cgview dconf-gsettings-backend dconf-service default-jre 181s default-jre-headless fontconfig gtk-update-icon-cache hicolor-icon-theme 181s humanity-icon-theme imagemagick imagemagick-6-common imagemagick-6.q16 181s java-common java-wrappers libalgorithm-diff-perl libapache-pom-java 181s libasound2-data libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 181s libatspi2.0-0t64 libavahi-client3 libavahi-common-data libavahi-common3 181s libbatik-java libbio-perl-perl libcairo-gobject2 libcairo2 181s libcapture-tiny-perl libclass-data-inheritable-perl libclone-perl libcolord2 181s libcommons-io-java libcommons-lang-java libcommons-logging-java 181s libcommons-parent-java libcups2t64 libdata-stag-perl libdatrie1 libdconf1 181s libdevel-stacktrace-perl libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 181s libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl 181s libfftw3-double3 libfile-listing-perl libgdk-pixbuf-2.0-0 181s libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa 181s libglvnd0 libglx-mesa0 libglx0 libgtk-3-0t64 libgtk-3-common 181s libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl 181s libhttp-cookies-perl libhttp-date-perl libhttp-message-perl 181s libhttp-negotiate-perl libio-html-perl libio-socket-ssl-perl 181s libio-string-perl libjargs-java libjaxp1.3-java liblcms2-2 libllvm17t64 181s liblqr-1-0 libltdl7 liblwp-mediatypes-perl liblwp-protocol-https-perl 181s libmagickcore-6.q16-7t64 libmagickwand-6.q16-7t64 libmbedcrypto7t64 181s libmbedtls14t64 libmbedx509-1t64 libnet-http-perl libnet-ssleay-perl 181s libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 181s libpcsclite1 libpixman-1-0 libraw23t64 libsub-uplevel-perl libtest-deep-perl 181s libtest-differences-perl libtest-exception-perl libtest-most-perl 181s libtest-warn-perl libtext-diff-perl libthai-data libthai0 libtie-ixhash-perl 181s libtimedate-perl libtry-tiny-perl liburi-perl libvulkan1 libwayland-client0 181s libwayland-cursor0 libwayland-egl1 libwebpdemux2 libwebpmux3 libwww-perl 181s libwww-robotrules-perl libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 181s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 181s libxcb-xfixes0 libxcomposite1 libxcursor1 libxdamage1 libxerces2-java 181s libxfixes3 libxi6 libxinerama1 libxml-commons-external-java 181s libxml-commons-resolver1.1-java libxmlgraphics-commons-java libxrandr2 181s libxrender1 libxshmfence1 libxtst6 libxxf86vm1 ncbi-blast+ 181s ncbi-blast+-legacy ncbi-data openjdk-21-jre openjdk-21-jre-headless 181s perl-openssl-defaults ubuntu-mono unzip x11-common 181s Suggested packages: 181s imagemagick-6-doc autotrace cups-bsd | lpr | lprng enscript ffmpeg gimp 181s gnuplot grads graphviz hp2xx html2ps libwmf-bin mplayer povray radiance 181s sane-utils texlive-base-bin transfig libraw-bin xdg-utils alsa-utils 181s libasound2-plugins librhino-java libxml-sax-expatxs-perl colord 181s libcommons-lang-java-doc libavalon-framework-java libexcalibur-logkit-java 181s liblog4j1.2-java cups-common libfftw3-bin libfftw3-dev gvfs 181s libdata-dump-perl libio-compress-brotli-perl liblcms2-utils 181s libcrypt-ssleay-perl libmagickcore-6.q16-7-extra pcscd libsub-name-perl 181s libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl 181s libxerces2-java-doc libxml-commons-resolver1.1-java-doc 181s libxmlgraphics-commons-java-doc libnss-mdns fonts-dejavu-extra 181s fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei 181s | fonts-wqy-zenhei fonts-indic debhelper zip 181s Recommended packages: 181s librsvg2-common bioperl-run perl-doc libcache-cache-perl 181s libbio-perl-run-perl libdbi-perl libgd-gd2-perl libapache-dbi-perl 181s libxml-simple-perl libyaml-perl libace-perl liblist-moreutils-perl 181s libxml-twig-perl libset-scalar-perl libmagickcore-6.q16-7-extra ghostscript 181s netpbm libalgorithm-diff-xs-perl alsa-ucm-conf alsa-topology-conf 181s at-spi2-core bioperl-run | libbio-perl-run-perl libalgorithm-munkres-perl 181s libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl 181s libdbd-sqlite3-perl libdbd-mysql-perl libdbd-pg-perl libgd-perl 181s libgraph-perl libgraphviz-perl libhtml-tableextract-perl libpostscript-perl 181s libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl 181s libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl 181s libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl 181s libxml-sax-writer-perl libxml-writer-perl libxml-libxml-perl perl-tk 181s libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl 181s libxml-perl libgdk-pixbuf2.0-bin libgl1-amber-dri libgtk-3-bin 181s libhtml-format-perl fonts-urw-base35 mesa-vulkan-drivers | vulkan-icd 181s libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl 181s libatk-wrapper-java-jni fonts-dejavu-extra 181s The following NEW packages will be installed: 181s adwaita-icon-theme at-spi2-common autopkgtest-satdep bioperl 181s ca-certificates-java cct cct-examples cgview dconf-gsettings-backend 181s dconf-service default-jre default-jre-headless fontconfig 181s gtk-update-icon-cache hicolor-icon-theme humanity-icon-theme imagemagick 181s imagemagick-6-common imagemagick-6.q16 java-common java-wrappers 181s libalgorithm-diff-perl libapache-pom-java libasound2-data libasound2t64 181s libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 libavahi-client3 181s libavahi-common-data libavahi-common3 libbatik-java libbio-perl-perl 181s libcairo-gobject2 libcairo2 libcapture-tiny-perl 181s libclass-data-inheritable-perl libclone-perl libcolord2 libcommons-io-java 181s libcommons-lang-java libcommons-logging-java libcommons-parent-java 181s libcups2t64 libdata-stag-perl libdatrie1 libdconf1 libdevel-stacktrace-perl 181s libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 libencode-locale-perl 181s libepoxy0 liberror-perl libexception-class-perl libfftw3-double3 181s libfile-listing-perl libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 181s libgl1 libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 181s libgtk-3-0t64 libgtk-3-common libhtml-parser-perl libhtml-tagset-perl 181s libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl 181s libhttp-message-perl libhttp-negotiate-perl libio-html-perl 181s libio-socket-ssl-perl libio-string-perl libjargs-java libjaxp1.3-java 181s liblcms2-2 libllvm17t64 liblqr-1-0 libltdl7 liblwp-mediatypes-perl 181s liblwp-protocol-https-perl libmagickcore-6.q16-7t64 libmagickwand-6.q16-7t64 181s libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libnet-http-perl 181s libnet-ssleay-perl libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 181s libpangoft2-1.0-0 libpcsclite1 libpixman-1-0 libraw23t64 libsub-uplevel-perl 181s libtest-deep-perl libtest-differences-perl libtest-exception-perl 181s libtest-most-perl libtest-warn-perl libtext-diff-perl libthai-data libthai0 181s libtie-ixhash-perl libtimedate-perl libtry-tiny-perl liburi-perl libvulkan1 181s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebpdemux2 181s libwebpmux3 libwww-perl libwww-robotrules-perl libx11-xcb1 libxcb-dri2-0 181s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 181s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1 181s libxdamage1 libxerces2-java libxfixes3 libxi6 libxinerama1 181s libxml-commons-external-java libxml-commons-resolver1.1-java 181s libxmlgraphics-commons-java libxrandr2 libxrender1 libxshmfence1 libxtst6 181s libxxf86vm1 ncbi-blast+ ncbi-blast+-legacy ncbi-data openjdk-21-jre 181s openjdk-21-jre-headless perl-openssl-defaults ubuntu-mono unzip x11-common 181s 0 upgraded, 155 newly installed, 0 to remove and 0 not upgraded. 181s Need to get 210 MB/210 MB of archives. 181s After this operation, 745 MB of additional disk space will be used. 181s Get:1 /tmp/autopkgtest.daqfG5/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [716 B] 181s Get:2 http://ftpmaster.internal/ubuntu oracular/main ppc64el libfftw3-double3 ppc64el 3.3.10-1ubuntu3 [443 kB] 182s Get:3 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblcms2-2 ppc64el 2.14-2build1 [233 kB] 182s Get:4 http://ftpmaster.internal/ubuntu oracular/universe ppc64el liblqr-1-0 ppc64el 0.4.2-2.1build2 [43.4 kB] 182s Get:5 http://ftpmaster.internal/ubuntu oracular/main ppc64el libltdl7 ppc64el 2.4.7-7build1 [48.2 kB] 182s Get:6 http://ftpmaster.internal/ubuntu oracular/main ppc64el libopenjp2-7 ppc64el 2.5.0-2build3 [239 kB] 182s Get:7 http://ftpmaster.internal/ubuntu oracular/main ppc64el libraw23t64 ppc64el 0.21.2-2.1build1 [516 kB] 182s Get:8 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwebpdemux2 ppc64el 1.4.0-0.1 [14.1 kB] 182s Get:9 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwebpmux3 ppc64el 1.4.0-0.1 [31.4 kB] 182s Get:10 http://ftpmaster.internal/ubuntu oracular/universe ppc64el imagemagick-6-common all 8:6.9.13.12+dfsg1-1 [69.5 kB] 182s Get:11 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libmagickcore-6.q16-7t64 ppc64el 8:6.9.13.12+dfsg1-1 [2214 kB] 182s Get:12 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libmagickwand-6.q16-7t64 ppc64el 8:6.9.13.12+dfsg1-1 [290 kB] 182s Get:13 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 182s Get:14 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgdk-pixbuf-2.0-0 ppc64el 2.42.12+dfsg-1 [186 kB] 182s Get:15 http://ftpmaster.internal/ubuntu oracular/main ppc64el gtk-update-icon-cache ppc64el 3.24.43-1ubuntu1 [54.5 kB] 182s Get:16 http://ftpmaster.internal/ubuntu oracular/main ppc64el hicolor-icon-theme all 0.18-1 [13.5 kB] 182s Get:17 http://ftpmaster.internal/ubuntu oracular/main ppc64el humanity-icon-theme all 0.6.16 [1282 kB] 182s Get:18 http://ftpmaster.internal/ubuntu oracular/main ppc64el ubuntu-mono all 24.04-0ubuntu1 [151 kB] 182s Get:19 http://ftpmaster.internal/ubuntu oracular/main ppc64el adwaita-icon-theme all 46.0-1 [723 kB] 182s Get:20 http://ftpmaster.internal/ubuntu oracular/main ppc64el at-spi2-common all 2.52.0-1build1 [8674 B] 182s Get:21 http://ftpmaster.internal/ubuntu oracular/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 182s Get:22 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libdata-stag-perl all 0.14-3 [372 kB] 182s Get:23 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libbio-perl-perl all 1.7.8-1 [2580 kB] 182s Get:24 http://ftpmaster.internal/ubuntu oracular/main ppc64el libclass-data-inheritable-perl all 0.08-3 [8084 B] 182s Get:25 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdevel-stacktrace-perl all 2.0500-1 [22.1 kB] 182s Get:26 http://ftpmaster.internal/ubuntu oracular/main ppc64el libexception-class-perl all 1.45-1 [28.6 kB] 182s Get:27 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtest-deep-perl all 1.204-1 [47.1 kB] 182s Get:28 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcapture-tiny-perl all 0.48-2 [20.2 kB] 182s Get:29 http://ftpmaster.internal/ubuntu oracular/main ppc64el libalgorithm-diff-perl all 1.201-1 [41.8 kB] 182s Get:30 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtext-diff-perl all 1.45-2 [25.6 kB] 182s Get:31 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtest-differences-perl all 0.71-1 [15.8 kB] 182s Get:32 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libsub-uplevel-perl all 0.2800-3 [11.6 kB] 182s Get:33 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtest-exception-perl all 0.43-3 [13.4 kB] 182s Get:34 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtest-warn-perl all 0.37-2 [12.6 kB] 182s Get:35 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libtest-most-perl all 0.38-1 [21.5 kB] 182s Get:36 http://ftpmaster.internal/ubuntu oracular/universe ppc64el bioperl all 1.7.8-1 [216 kB] 182s Get:37 http://ftpmaster.internal/ubuntu oracular/main ppc64el ca-certificates-java all 20240118 [11.6 kB] 182s Get:38 http://ftpmaster.internal/ubuntu oracular/main ppc64el unzip ppc64el 6.0-28ubuntu5 [196 kB] 182s Get:39 http://ftpmaster.internal/ubuntu oracular/universe ppc64el java-wrappers all 0.4 [8662 B] 182s Get:40 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjaxp1.3-java all 1.3.05-6 [227 kB] 182s Get:41 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libxml-commons-external-java all 1.4.01-6 [240 kB] 182s Get:42 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libapache-pom-java all 29-2 [5284 B] 182s Get:43 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libcommons-parent-java all 56-1 [10.7 kB] 182s Get:44 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libcommons-io-java all 2.16.1-1 [451 kB] 182s Get:45 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 182s Get:46 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libxmlgraphics-commons-java all 2.8-2 [619 kB] 182s Get:47 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libbatik-java all 1.17+dfsg-1 [3877 kB] 183s Get:48 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libcommons-lang-java all 2.6-10 [270 kB] 183s Get:49 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libjargs-java all 1.0.0-5 [13.9 kB] 183s Get:50 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB] 183s Get:51 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libxerces2-java all 2.12.2-1 [1430 kB] 183s Get:52 http://ftpmaster.internal/ubuntu oracular/main ppc64el java-common all 0.75+exp1 [6798 B] 183s Get:53 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpcsclite1 ppc64el 2.2.3-1 [30.7 kB] 183s Get:54 http://ftpmaster.internal/ubuntu oracular/main ppc64el openjdk-21-jre-headless ppc64el 21.0.4+7-1ubuntu2 [45.9 MB] 184s Get:55 http://ftpmaster.internal/ubuntu oracular/main ppc64el default-jre-headless ppc64el 2:1.21-75+exp1 [3102 B] 184s Get:56 http://ftpmaster.internal/ubuntu oracular/main ppc64el libatk1.0-0t64 ppc64el 2.52.0-1build1 [60.4 kB] 184s Get:57 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxi6 ppc64el 2:1.8.1-1build1 [37.9 kB] 184s Get:58 http://ftpmaster.internal/ubuntu oracular/main ppc64el libatspi2.0-0t64 ppc64el 2.52.0-1build1 [98.9 kB] 184s Get:59 http://ftpmaster.internal/ubuntu oracular/main ppc64el libatk-bridge2.0-0t64 ppc64el 2.52.0-1build1 [77.8 kB] 184s Get:60 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpixman-1-0 ppc64el 0.42.2-1build1 [336 kB] 184s Get:61 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB] 184s Get:62 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B] 184s Get:63 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 184s Get:64 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcairo2 ppc64el 1.18.0-3build1 [751 kB] 184s Get:65 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcairo-gobject2 ppc64el 1.18.0-3build1 [127 kB] 184s Get:66 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcolord2 ppc64el 1.4.7-1build2 [164 kB] 184s Get:67 http://ftpmaster.internal/ubuntu oracular/main ppc64el libavahi-common-data ppc64el 0.8-13ubuntu6 [29.7 kB] 184s Get:68 http://ftpmaster.internal/ubuntu oracular/main ppc64el libavahi-common3 ppc64el 0.8-13ubuntu6 [26.3 kB] 184s Get:69 http://ftpmaster.internal/ubuntu oracular/main ppc64el libavahi-client3 ppc64el 0.8-13ubuntu6 [30.8 kB] 184s Get:70 http://ftpmaster.internal/ubuntu oracular/main ppc64el libcups2t64 ppc64el 2.4.7-1.2ubuntu9 [345 kB] 184s Get:71 http://ftpmaster.internal/ubuntu oracular/main ppc64el libepoxy0 ppc64el 1.5.10-1build1 [241 kB] 184s Get:72 http://ftpmaster.internal/ubuntu oracular/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB] 184s Get:73 http://ftpmaster.internal/ubuntu oracular/main ppc64el libthai-data all 0.1.29-2build1 [158 kB] 184s Get:74 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdatrie1 ppc64el 0.2.13-3build1 [22.7 kB] 184s Get:75 http://ftpmaster.internal/ubuntu oracular/main ppc64el libthai0 ppc64el 0.1.29-2build1 [21.8 kB] 184s Get:76 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpango-1.0-0 ppc64el 1.54.0+ds-1 [270 kB] 184s Get:77 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpangoft2-1.0-0 ppc64el 1.54.0+ds-1 [49.9 kB] 184s Get:78 http://ftpmaster.internal/ubuntu oracular/main ppc64el libpangocairo-1.0-0 ppc64el 1.54.0+ds-1 [30.4 kB] 184s Get:79 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwayland-client0 ppc64el 1.22.0-2.1build1 [29.9 kB] 184s Get:80 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwayland-cursor0 ppc64el 1.22.0-2.1build1 [11.5 kB] 184s Get:81 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwayland-egl1 ppc64el 1.22.0-2.1build1 [5766 B] 184s Get:82 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcomposite1 ppc64el 1:0.4.5-1build3 [6600 B] 184s Get:83 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxfixes3 ppc64el 1:6.0.0-2build1 [11.8 kB] 184s Get:84 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcursor1 ppc64el 1:1.2.2-1 [26.3 kB] 184s Get:85 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxdamage1 ppc64el 1:1.1.6-1build1 [6550 B] 184s Get:86 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxinerama1 ppc64el 2:1.1.4-3build1 [6908 B] 184s Get:87 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxrandr2 ppc64el 2:1.5.4-1 [21.7 kB] 184s Get:88 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdconf1 ppc64el 0.40.0-4build2 [44.0 kB] 184s Get:89 http://ftpmaster.internal/ubuntu oracular/main ppc64el dconf-service ppc64el 0.40.0-4build2 [31.1 kB] 184s Get:90 http://ftpmaster.internal/ubuntu oracular/main ppc64el dconf-gsettings-backend ppc64el 0.40.0-4build2 [26.5 kB] 184s Get:91 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgtk-3-common all 3.24.43-1ubuntu1 [1201 kB] 184s Get:92 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgtk-3-0t64 ppc64el 3.24.43-1ubuntu1 [3334 kB] 184s Get:93 http://ftpmaster.internal/ubuntu oracular/main ppc64el libglvnd0 ppc64el 1.7.0-1build1 [72.4 kB] 184s Get:94 http://ftpmaster.internal/ubuntu oracular/main ppc64el libglapi-mesa ppc64el 24.0.9-0ubuntu2 [41.9 kB] 184s Get:95 http://ftpmaster.internal/ubuntu oracular/main ppc64el libx11-xcb1 ppc64el 2:1.8.7-1build1 [7910 B] 184s Get:96 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-dri2-0 ppc64el 1.17.0-2 [7508 B] 184s Get:97 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-dri3-0 ppc64el 1.17.0-2 [7842 B] 184s Get:98 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-glx0 ppc64el 1.17.0-2 [26.3 kB] 184s Get:99 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-present0 ppc64el 1.17.0-2 [6276 B] 184s Get:100 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-randr0 ppc64el 1.17.0-2 [19.1 kB] 184s Get:101 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-sync1 ppc64el 1.17.0-2 [9804 B] 184s Get:102 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxcb-xfixes0 ppc64el 1.17.0-2 [10.7 kB] 184s Get:103 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxshmfence1 ppc64el 1.3-1build5 [4964 B] 184s Get:104 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1build4 [11.1 kB] 184s Get:105 http://ftpmaster.internal/ubuntu oracular/main ppc64el libvulkan1 ppc64el 1.3.283.0-1 [176 kB] 185s Get:106 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdrm-amdgpu1 ppc64el 2.4.121-2 [24.8 kB] 185s Get:107 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdrm-nouveau2 ppc64el 2.4.121-2 [21.0 kB] 185s Get:108 http://ftpmaster.internal/ubuntu oracular/main ppc64el libdrm-radeon1 ppc64el 2.4.121-2 [29.6 kB] 185s Get:109 http://ftpmaster.internal/ubuntu oracular/main ppc64el libllvm17t64 ppc64el 1:17.0.6-12 [27.1 MB] 185s Get:110 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgl1-mesa-dri ppc64el 24.0.9-0ubuntu2 [5832 kB] 186s Get:111 http://ftpmaster.internal/ubuntu oracular/main ppc64el libglx-mesa0 ppc64el 24.0.9-0ubuntu2 [157 kB] 186s Get:112 http://ftpmaster.internal/ubuntu oracular/main ppc64el libglx0 ppc64el 1.7.0-1build1 [42.7 kB] 186s Get:113 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgl1 ppc64el 1.7.0-1build1 [107 kB] 186s Get:114 http://ftpmaster.internal/ubuntu oracular/main ppc64el libasound2-data all 1.2.12-1 [21.0 kB] 186s Get:115 http://ftpmaster.internal/ubuntu oracular/main ppc64el libasound2t64 ppc64el 1.2.12-1 [493 kB] 186s Get:116 http://ftpmaster.internal/ubuntu oracular/main ppc64el libgif7 ppc64el 5.2.2-1ubuntu1 [41.2 kB] 186s Get:117 http://ftpmaster.internal/ubuntu oracular/main ppc64el x11-common all 1:7.7+23ubuntu3 [21.7 kB] 186s Get:118 http://ftpmaster.internal/ubuntu oracular/main ppc64el libxtst6 ppc64el 2:1.2.3-1.1build1 [14.4 kB] 186s Get:119 http://ftpmaster.internal/ubuntu oracular/main ppc64el openjdk-21-jre ppc64el 21.0.4+7-1ubuntu2 [245 kB] 186s Get:120 http://ftpmaster.internal/ubuntu oracular/main ppc64el default-jre ppc64el 2:1.21-75+exp1 [922 B] 186s Get:121 http://ftpmaster.internal/ubuntu oracular/universe ppc64el cgview all 0.0.20100111-7 [2220 kB] 186s Get:122 http://ftpmaster.internal/ubuntu oracular/universe ppc64el ncbi-data all 6.1.20170106+dfsg2-3 [3966 kB] 186s Get:123 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libmbedcrypto7t64 ppc64el 2.28.8-1 [267 kB] 186s Get:124 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libmbedx509-1t64 ppc64el 2.28.8-1 [51.7 kB] 186s Get:125 http://ftpmaster.internal/ubuntu oracular/universe ppc64el libmbedtls14t64 ppc64el 2.28.8-1 [90.6 kB] 186s Get:126 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el ncbi-blast+ ppc64el 2.16.0+ds-3 [16.1 MB] 186s Get:127 http://ftpmaster.internal/ubuntu oracular-proposed/universe ppc64el ncbi-blast+-legacy all 2.16.0+ds-3 [4992 B] 186s Get:128 http://ftpmaster.internal/ubuntu oracular/universe ppc64el imagemagick-6.q16 ppc64el 8:6.9.13.12+dfsg1-1 [254 kB] 186s Get:129 http://ftpmaster.internal/ubuntu oracular/universe ppc64el imagemagick ppc64el 8:6.9.13.12+dfsg1-1 [14.2 kB] 186s Get:130 http://ftpmaster.internal/ubuntu oracular/main ppc64el liberror-perl all 0.17029-2 [25.6 kB] 186s Get:131 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtie-ixhash-perl all 1.23-4 [11.3 kB] 186s Get:132 http://ftpmaster.internal/ubuntu oracular/main ppc64el libencode-locale-perl all 1.05-3 [11.6 kB] 186s Get:133 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtimedate-perl all 2.3300-2 [34.0 kB] 186s Get:134 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhttp-date-perl all 6.06-1 [10.2 kB] 186s Get:135 http://ftpmaster.internal/ubuntu oracular/main ppc64el libfile-listing-perl all 6.16-1 [11.3 kB] 186s Get:136 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhtml-tagset-perl all 3.24-1 [14.1 kB] 186s Get:137 http://ftpmaster.internal/ubuntu oracular/main ppc64el liburi-perl all 5.28-1 [88.1 kB] 186s Get:138 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhtml-parser-perl ppc64el 3.82-1 [91.2 kB] 186s Get:139 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhtml-tree-perl all 5.07-3 [200 kB] 186s Get:140 http://ftpmaster.internal/ubuntu oracular/main ppc64el libclone-perl ppc64el 0.46-1build3 [11.2 kB] 186s Get:141 http://ftpmaster.internal/ubuntu oracular/main ppc64el libio-html-perl all 1.004-3 [15.9 kB] 186s Get:142 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblwp-mediatypes-perl all 6.04-2 [20.1 kB] 186s Get:143 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhttp-message-perl all 6.46-1ubuntu1 [75.9 kB] 186s Get:144 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhttp-cookies-perl all 6.11-1 [18.2 kB] 186s Get:145 http://ftpmaster.internal/ubuntu oracular/main ppc64el libhttp-negotiate-perl all 6.01-2 [12.4 kB] 186s Get:146 http://ftpmaster.internal/ubuntu oracular/main ppc64el perl-openssl-defaults ppc64el 7build3 [6628 B] 186s Get:147 http://ftpmaster.internal/ubuntu oracular/main ppc64el libnet-ssleay-perl ppc64el 1.94-1build4 [327 kB] 186s Get:148 http://ftpmaster.internal/ubuntu oracular/main ppc64el libio-socket-ssl-perl all 2.088-1 [200 kB] 186s Get:149 http://ftpmaster.internal/ubuntu oracular/main ppc64el libnet-http-perl all 6.23-1 [22.3 kB] 186s Get:150 http://ftpmaster.internal/ubuntu oracular/main ppc64el liblwp-protocol-https-perl all 6.14-1 [9040 B] 186s Get:151 http://ftpmaster.internal/ubuntu oracular/main ppc64el libtry-tiny-perl all 0.31-2 [20.8 kB] 186s Get:152 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwww-robotrules-perl all 6.02-1 [12.6 kB] 186s Get:153 http://ftpmaster.internal/ubuntu oracular/main ppc64el libwww-perl all 6.77-1 [138 kB] 186s Get:154 http://ftpmaster.internal/ubuntu oracular/universe ppc64el cct all 1:1.0.3-1 [36.3 MB] 187s Get:155 http://ftpmaster.internal/ubuntu oracular/universe ppc64el cct-examples all 1:1.0.3-1 [43.6 MB] 189s Fetched 210 MB in 7s (28.9 MB/s) 189s Selecting previously unselected package libfftw3-double3:ppc64el. 189s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72809 files and directories currently installed.) 189s Preparing to unpack .../000-libfftw3-double3_3.3.10-1ubuntu3_ppc64el.deb ... 189s Unpacking libfftw3-double3:ppc64el (3.3.10-1ubuntu3) ... 189s Selecting previously unselected package liblcms2-2:ppc64el. 189s Preparing to unpack .../001-liblcms2-2_2.14-2build1_ppc64el.deb ... 189s Unpacking liblcms2-2:ppc64el (2.14-2build1) ... 189s Selecting previously unselected package liblqr-1-0:ppc64el. 189s Preparing to unpack .../002-liblqr-1-0_0.4.2-2.1build2_ppc64el.deb ... 189s Unpacking liblqr-1-0:ppc64el (0.4.2-2.1build2) ... 189s Selecting previously unselected package libltdl7:ppc64el. 189s Preparing to unpack .../003-libltdl7_2.4.7-7build1_ppc64el.deb ... 189s Unpacking libltdl7:ppc64el (2.4.7-7build1) ... 189s Selecting previously unselected package libopenjp2-7:ppc64el. 189s Preparing to unpack .../004-libopenjp2-7_2.5.0-2build3_ppc64el.deb ... 189s Unpacking libopenjp2-7:ppc64el (2.5.0-2build3) ... 189s Selecting previously unselected package libraw23t64:ppc64el. 189s Preparing to unpack .../005-libraw23t64_0.21.2-2.1build1_ppc64el.deb ... 189s Unpacking libraw23t64:ppc64el (0.21.2-2.1build1) ... 189s Selecting previously unselected package libwebpdemux2:ppc64el. 189s Preparing to unpack .../006-libwebpdemux2_1.4.0-0.1_ppc64el.deb ... 189s Unpacking libwebpdemux2:ppc64el (1.4.0-0.1) ... 189s Selecting previously unselected package libwebpmux3:ppc64el. 189s Preparing to unpack .../007-libwebpmux3_1.4.0-0.1_ppc64el.deb ... 189s Unpacking libwebpmux3:ppc64el (1.4.0-0.1) ... 190s Selecting previously unselected package imagemagick-6-common. 190s Preparing to unpack .../008-imagemagick-6-common_8%3a6.9.13.12+dfsg1-1_all.deb ... 190s Unpacking imagemagick-6-common (8:6.9.13.12+dfsg1-1) ... 190s Selecting previously unselected package libmagickcore-6.q16-7t64:ppc64el. 190s Preparing to unpack .../009-libmagickcore-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_ppc64el.deb ... 190s Unpacking libmagickcore-6.q16-7t64:ppc64el (8:6.9.13.12+dfsg1-1) ... 190s Selecting previously unselected package libmagickwand-6.q16-7t64:ppc64el. 190s Preparing to unpack .../010-libmagickwand-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_ppc64el.deb ... 190s Unpacking libmagickwand-6.q16-7t64:ppc64el (8:6.9.13.12+dfsg1-1) ... 190s Selecting previously unselected package libgdk-pixbuf2.0-common. 190s Preparing to unpack .../011-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 190s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 190s Selecting previously unselected package libgdk-pixbuf-2.0-0:ppc64el. 190s Preparing to unpack .../012-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_ppc64el.deb ... 190s Unpacking libgdk-pixbuf-2.0-0:ppc64el (2.42.12+dfsg-1) ... 190s Selecting previously unselected package gtk-update-icon-cache. 190s Preparing to unpack .../013-gtk-update-icon-cache_3.24.43-1ubuntu1_ppc64el.deb ... 190s Unpacking gtk-update-icon-cache (3.24.43-1ubuntu1) ... 190s Selecting previously unselected package hicolor-icon-theme. 190s Preparing to unpack .../014-hicolor-icon-theme_0.18-1_all.deb ... 190s Unpacking hicolor-icon-theme (0.18-1) ... 190s Selecting previously unselected package humanity-icon-theme. 190s Preparing to unpack .../015-humanity-icon-theme_0.6.16_all.deb ... 190s Unpacking humanity-icon-theme (0.6.16) ... 191s Selecting previously unselected package ubuntu-mono. 191s Preparing to unpack .../016-ubuntu-mono_24.04-0ubuntu1_all.deb ... 191s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 191s Selecting previously unselected package adwaita-icon-theme. 191s Preparing to unpack .../017-adwaita-icon-theme_46.0-1_all.deb ... 191s Unpacking adwaita-icon-theme (46.0-1) ... 192s Selecting previously unselected package at-spi2-common. 192s Preparing to unpack .../018-at-spi2-common_2.52.0-1build1_all.deb ... 192s Unpacking at-spi2-common (2.52.0-1build1) ... 192s Selecting previously unselected package libio-string-perl. 192s Preparing to unpack .../019-libio-string-perl_1.08-4_all.deb ... 192s Unpacking libio-string-perl (1.08-4) ... 192s Selecting previously unselected package libdata-stag-perl. 192s Preparing to unpack .../020-libdata-stag-perl_0.14-3_all.deb ... 192s Unpacking libdata-stag-perl (0.14-3) ... 192s Selecting previously unselected package libbio-perl-perl. 192s Preparing to unpack .../021-libbio-perl-perl_1.7.8-1_all.deb ... 192s Unpacking libbio-perl-perl (1.7.8-1) ... 192s Selecting previously unselected package libclass-data-inheritable-perl. 192s Preparing to unpack .../022-libclass-data-inheritable-perl_0.08-3_all.deb ... 192s Unpacking libclass-data-inheritable-perl (0.08-3) ... 192s Selecting previously unselected package libdevel-stacktrace-perl. 192s Preparing to unpack .../023-libdevel-stacktrace-perl_2.0500-1_all.deb ... 192s Unpacking libdevel-stacktrace-perl (2.0500-1) ... 192s Selecting previously unselected package libexception-class-perl. 192s Preparing to unpack .../024-libexception-class-perl_1.45-1_all.deb ... 192s Unpacking libexception-class-perl (1.45-1) ... 192s Selecting previously unselected package libtest-deep-perl. 192s Preparing to unpack .../025-libtest-deep-perl_1.204-1_all.deb ... 192s Unpacking libtest-deep-perl (1.204-1) ... 192s Selecting previously unselected package libcapture-tiny-perl. 192s Preparing to unpack .../026-libcapture-tiny-perl_0.48-2_all.deb ... 192s Unpacking libcapture-tiny-perl (0.48-2) ... 192s Selecting previously unselected package libalgorithm-diff-perl. 192s Preparing to unpack .../027-libalgorithm-diff-perl_1.201-1_all.deb ... 192s Unpacking libalgorithm-diff-perl (1.201-1) ... 192s Selecting previously unselected package libtext-diff-perl. 192s Preparing to unpack .../028-libtext-diff-perl_1.45-2_all.deb ... 192s Unpacking libtext-diff-perl (1.45-2) ... 192s Selecting previously unselected package libtest-differences-perl. 192s Preparing to unpack .../029-libtest-differences-perl_0.71-1_all.deb ... 192s Unpacking libtest-differences-perl (0.71-1) ... 192s Selecting previously unselected package libsub-uplevel-perl. 192s Preparing to unpack .../030-libsub-uplevel-perl_0.2800-3_all.deb ... 192s Unpacking libsub-uplevel-perl (0.2800-3) ... 192s Selecting previously unselected package libtest-exception-perl. 192s Preparing to unpack .../031-libtest-exception-perl_0.43-3_all.deb ... 192s Unpacking libtest-exception-perl (0.43-3) ... 192s Selecting previously unselected package libtest-warn-perl. 192s Preparing to unpack .../032-libtest-warn-perl_0.37-2_all.deb ... 192s Unpacking libtest-warn-perl (0.37-2) ... 192s Selecting previously unselected package libtest-most-perl. 192s Preparing to unpack .../033-libtest-most-perl_0.38-1_all.deb ... 192s Unpacking libtest-most-perl (0.38-1) ... 192s Selecting previously unselected package bioperl. 192s Preparing to unpack .../034-bioperl_1.7.8-1_all.deb ... 192s Unpacking bioperl (1.7.8-1) ... 192s Selecting previously unselected package ca-certificates-java. 192s Preparing to unpack .../035-ca-certificates-java_20240118_all.deb ... 192s Unpacking ca-certificates-java (20240118) ... 192s Selecting previously unselected package unzip. 192s Preparing to unpack .../036-unzip_6.0-28ubuntu5_ppc64el.deb ... 192s Unpacking unzip (6.0-28ubuntu5) ... 192s Selecting previously unselected package java-wrappers. 192s Preparing to unpack .../037-java-wrappers_0.4_all.deb ... 192s Unpacking java-wrappers (0.4) ... 192s Selecting previously unselected package libjaxp1.3-java. 192s Preparing to unpack .../038-libjaxp1.3-java_1.3.05-6_all.deb ... 192s Unpacking libjaxp1.3-java (1.3.05-6) ... 192s Selecting previously unselected package libxml-commons-external-java. 192s Preparing to unpack .../039-libxml-commons-external-java_1.4.01-6_all.deb ... 192s Unpacking libxml-commons-external-java (1.4.01-6) ... 192s Selecting previously unselected package libapache-pom-java. 192s Preparing to unpack .../040-libapache-pom-java_29-2_all.deb ... 192s Unpacking libapache-pom-java (29-2) ... 192s Selecting previously unselected package libcommons-parent-java. 192s Preparing to unpack .../041-libcommons-parent-java_56-1_all.deb ... 192s Unpacking libcommons-parent-java (56-1) ... 192s Selecting previously unselected package libcommons-io-java. 192s Preparing to unpack .../042-libcommons-io-java_2.16.1-1_all.deb ... 192s Unpacking libcommons-io-java (2.16.1-1) ... 192s Selecting previously unselected package libcommons-logging-java. 192s Preparing to unpack .../043-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 192s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 192s Selecting previously unselected package libxmlgraphics-commons-java. 192s Preparing to unpack .../044-libxmlgraphics-commons-java_2.8-2_all.deb ... 192s Unpacking libxmlgraphics-commons-java (2.8-2) ... 192s Selecting previously unselected package libbatik-java. 192s Preparing to unpack .../045-libbatik-java_1.17+dfsg-1_all.deb ... 192s Unpacking libbatik-java (1.17+dfsg-1) ... 192s Selecting previously unselected package libcommons-lang-java. 192s Preparing to unpack .../046-libcommons-lang-java_2.6-10_all.deb ... 192s Unpacking libcommons-lang-java (2.6-10) ... 192s Selecting previously unselected package libjargs-java. 192s Preparing to unpack .../047-libjargs-java_1.0.0-5_all.deb ... 192s Unpacking libjargs-java (1.0.0-5) ... 192s Selecting previously unselected package libxml-commons-resolver1.1-java. 192s Preparing to unpack .../048-libxml-commons-resolver1.1-java_1.2-11_all.deb ... 192s Unpacking libxml-commons-resolver1.1-java (1.2-11) ... 192s Selecting previously unselected package libxerces2-java. 192s Preparing to unpack .../049-libxerces2-java_2.12.2-1_all.deb ... 192s Unpacking libxerces2-java (2.12.2-1) ... 193s Selecting previously unselected package java-common. 193s Preparing to unpack .../050-java-common_0.75+exp1_all.deb ... 193s Unpacking java-common (0.75+exp1) ... 193s Selecting previously unselected package libpcsclite1:ppc64el. 193s Preparing to unpack .../051-libpcsclite1_2.2.3-1_ppc64el.deb ... 193s Unpacking libpcsclite1:ppc64el (2.2.3-1) ... 193s Selecting previously unselected package openjdk-21-jre-headless:ppc64el. 193s Preparing to unpack .../052-openjdk-21-jre-headless_21.0.4+7-1ubuntu2_ppc64el.deb ... 193s Unpacking openjdk-21-jre-headless:ppc64el (21.0.4+7-1ubuntu2) ... 194s Selecting previously unselected package default-jre-headless. 194s Preparing to unpack .../053-default-jre-headless_2%3a1.21-75+exp1_ppc64el.deb ... 194s Unpacking default-jre-headless (2:1.21-75+exp1) ... 194s Selecting previously unselected package libatk1.0-0t64:ppc64el. 194s Preparing to unpack .../054-libatk1.0-0t64_2.52.0-1build1_ppc64el.deb ... 194s Unpacking libatk1.0-0t64:ppc64el (2.52.0-1build1) ... 194s Selecting previously unselected package libxi6:ppc64el. 194s Preparing to unpack .../055-libxi6_2%3a1.8.1-1build1_ppc64el.deb ... 194s Unpacking libxi6:ppc64el (2:1.8.1-1build1) ... 194s Selecting previously unselected package libatspi2.0-0t64:ppc64el. 194s Preparing to unpack .../056-libatspi2.0-0t64_2.52.0-1build1_ppc64el.deb ... 194s Unpacking libatspi2.0-0t64:ppc64el (2.52.0-1build1) ... 194s Selecting previously unselected package libatk-bridge2.0-0t64:ppc64el. 194s Preparing to unpack .../057-libatk-bridge2.0-0t64_2.52.0-1build1_ppc64el.deb ... 194s Unpacking libatk-bridge2.0-0t64:ppc64el (2.52.0-1build1) ... 194s Selecting previously unselected package libpixman-1-0:ppc64el. 194s Preparing to unpack .../058-libpixman-1-0_0.42.2-1build1_ppc64el.deb ... 194s Unpacking libpixman-1-0:ppc64el (0.42.2-1build1) ... 194s Selecting previously unselected package libxcb-render0:ppc64el. 194s Preparing to unpack .../059-libxcb-render0_1.17.0-2_ppc64el.deb ... 194s Unpacking libxcb-render0:ppc64el (1.17.0-2) ... 194s Selecting previously unselected package libxcb-shm0:ppc64el. 194s Preparing to unpack .../060-libxcb-shm0_1.17.0-2_ppc64el.deb ... 194s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ... 194s Selecting previously unselected package libxrender1:ppc64el. 194s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 194s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 194s Selecting previously unselected package libcairo2:ppc64el. 194s Preparing to unpack .../062-libcairo2_1.18.0-3build1_ppc64el.deb ... 194s Unpacking libcairo2:ppc64el (1.18.0-3build1) ... 194s Selecting previously unselected package libcairo-gobject2:ppc64el. 194s Preparing to unpack .../063-libcairo-gobject2_1.18.0-3build1_ppc64el.deb ... 194s Unpacking libcairo-gobject2:ppc64el (1.18.0-3build1) ... 194s Selecting previously unselected package libcolord2:ppc64el. 194s Preparing to unpack .../064-libcolord2_1.4.7-1build2_ppc64el.deb ... 194s Unpacking libcolord2:ppc64el (1.4.7-1build2) ... 194s Selecting previously unselected package libavahi-common-data:ppc64el. 194s Preparing to unpack .../065-libavahi-common-data_0.8-13ubuntu6_ppc64el.deb ... 194s Unpacking libavahi-common-data:ppc64el (0.8-13ubuntu6) ... 194s Selecting previously unselected package libavahi-common3:ppc64el. 194s Preparing to unpack .../066-libavahi-common3_0.8-13ubuntu6_ppc64el.deb ... 194s Unpacking libavahi-common3:ppc64el (0.8-13ubuntu6) ... 194s Selecting previously unselected package libavahi-client3:ppc64el. 194s Preparing to unpack .../067-libavahi-client3_0.8-13ubuntu6_ppc64el.deb ... 194s Unpacking libavahi-client3:ppc64el (0.8-13ubuntu6) ... 194s Selecting previously unselected package libcups2t64:ppc64el. 194s Preparing to unpack .../068-libcups2t64_2.4.7-1.2ubuntu9_ppc64el.deb ... 194s Unpacking libcups2t64:ppc64el (2.4.7-1.2ubuntu9) ... 194s Selecting previously unselected package libepoxy0:ppc64el. 194s Preparing to unpack .../069-libepoxy0_1.5.10-1build1_ppc64el.deb ... 194s Unpacking libepoxy0:ppc64el (1.5.10-1build1) ... 195s Selecting previously unselected package fontconfig. 195s Preparing to unpack .../070-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ... 195s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 195s Selecting previously unselected package libthai-data. 195s Preparing to unpack .../071-libthai-data_0.1.29-2build1_all.deb ... 195s Unpacking libthai-data (0.1.29-2build1) ... 195s Selecting previously unselected package libdatrie1:ppc64el. 195s Preparing to unpack .../072-libdatrie1_0.2.13-3build1_ppc64el.deb ... 195s Unpacking libdatrie1:ppc64el (0.2.13-3build1) ... 195s Selecting previously unselected package libthai0:ppc64el. 195s Preparing to unpack .../073-libthai0_0.1.29-2build1_ppc64el.deb ... 195s Unpacking libthai0:ppc64el (0.1.29-2build1) ... 195s Selecting previously unselected package libpango-1.0-0:ppc64el. 195s Preparing to unpack .../074-libpango-1.0-0_1.54.0+ds-1_ppc64el.deb ... 195s Unpacking libpango-1.0-0:ppc64el (1.54.0+ds-1) ... 195s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 195s Preparing to unpack .../075-libpangoft2-1.0-0_1.54.0+ds-1_ppc64el.deb ... 195s Unpacking libpangoft2-1.0-0:ppc64el (1.54.0+ds-1) ... 195s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 195s Preparing to unpack .../076-libpangocairo-1.0-0_1.54.0+ds-1_ppc64el.deb ... 195s Unpacking libpangocairo-1.0-0:ppc64el (1.54.0+ds-1) ... 195s Selecting previously unselected package libwayland-client0:ppc64el. 195s Preparing to unpack .../077-libwayland-client0_1.22.0-2.1build1_ppc64el.deb ... 195s Unpacking libwayland-client0:ppc64el (1.22.0-2.1build1) ... 195s Selecting previously unselected package libwayland-cursor0:ppc64el. 195s Preparing to unpack .../078-libwayland-cursor0_1.22.0-2.1build1_ppc64el.deb ... 195s Unpacking libwayland-cursor0:ppc64el (1.22.0-2.1build1) ... 195s Selecting previously unselected package libwayland-egl1:ppc64el. 195s Preparing to unpack .../079-libwayland-egl1_1.22.0-2.1build1_ppc64el.deb ... 195s Unpacking libwayland-egl1:ppc64el (1.22.0-2.1build1) ... 195s Selecting previously unselected package libxcomposite1:ppc64el. 195s Preparing to unpack .../080-libxcomposite1_1%3a0.4.5-1build3_ppc64el.deb ... 195s Unpacking libxcomposite1:ppc64el (1:0.4.5-1build3) ... 195s Selecting previously unselected package libxfixes3:ppc64el. 195s Preparing to unpack .../081-libxfixes3_1%3a6.0.0-2build1_ppc64el.deb ... 195s Unpacking libxfixes3:ppc64el (1:6.0.0-2build1) ... 195s Selecting previously unselected package libxcursor1:ppc64el. 195s Preparing to unpack .../082-libxcursor1_1%3a1.2.2-1_ppc64el.deb ... 195s Unpacking libxcursor1:ppc64el (1:1.2.2-1) ... 195s Selecting previously unselected package libxdamage1:ppc64el. 195s Preparing to unpack .../083-libxdamage1_1%3a1.1.6-1build1_ppc64el.deb ... 195s Unpacking libxdamage1:ppc64el (1:1.1.6-1build1) ... 195s Selecting previously unselected package libxinerama1:ppc64el. 195s Preparing to unpack .../084-libxinerama1_2%3a1.1.4-3build1_ppc64el.deb ... 195s Unpacking libxinerama1:ppc64el (2:1.1.4-3build1) ... 195s Selecting previously unselected package libxrandr2:ppc64el. 195s Preparing to unpack .../085-libxrandr2_2%3a1.5.4-1_ppc64el.deb ... 195s Unpacking libxrandr2:ppc64el (2:1.5.4-1) ... 195s Selecting previously unselected package libdconf1:ppc64el. 195s Preparing to unpack .../086-libdconf1_0.40.0-4build2_ppc64el.deb ... 195s Unpacking libdconf1:ppc64el (0.40.0-4build2) ... 195s Selecting previously unselected package dconf-service. 195s Preparing to unpack .../087-dconf-service_0.40.0-4build2_ppc64el.deb ... 195s Unpacking dconf-service (0.40.0-4build2) ... 195s Selecting previously unselected package dconf-gsettings-backend:ppc64el. 195s Preparing to unpack .../088-dconf-gsettings-backend_0.40.0-4build2_ppc64el.deb ... 195s Unpacking dconf-gsettings-backend:ppc64el (0.40.0-4build2) ... 195s Selecting previously unselected package libgtk-3-common. 195s Preparing to unpack .../089-libgtk-3-common_3.24.43-1ubuntu1_all.deb ... 195s Unpacking libgtk-3-common (3.24.43-1ubuntu1) ... 195s Selecting previously unselected package libgtk-3-0t64:ppc64el. 195s Preparing to unpack .../090-libgtk-3-0t64_3.24.43-1ubuntu1_ppc64el.deb ... 195s Unpacking libgtk-3-0t64:ppc64el (3.24.43-1ubuntu1) ... 195s Selecting previously unselected package libglvnd0:ppc64el. 195s Preparing to unpack .../091-libglvnd0_1.7.0-1build1_ppc64el.deb ... 195s Unpacking libglvnd0:ppc64el (1.7.0-1build1) ... 195s Selecting previously unselected package libglapi-mesa:ppc64el. 195s Preparing to unpack .../092-libglapi-mesa_24.0.9-0ubuntu2_ppc64el.deb ... 195s Unpacking libglapi-mesa:ppc64el (24.0.9-0ubuntu2) ... 195s Selecting previously unselected package libx11-xcb1:ppc64el. 195s Preparing to unpack .../093-libx11-xcb1_2%3a1.8.7-1build1_ppc64el.deb ... 195s Unpacking libx11-xcb1:ppc64el (2:1.8.7-1build1) ... 195s Selecting previously unselected package libxcb-dri2-0:ppc64el. 195s Preparing to unpack .../094-libxcb-dri2-0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-dri2-0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-dri3-0:ppc64el. 195s Preparing to unpack .../095-libxcb-dri3-0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-dri3-0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-glx0:ppc64el. 195s Preparing to unpack .../096-libxcb-glx0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-glx0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-present0:ppc64el. 195s Preparing to unpack .../097-libxcb-present0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-present0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-randr0:ppc64el. 195s Preparing to unpack .../098-libxcb-randr0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-randr0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-sync1:ppc64el. 195s Preparing to unpack .../099-libxcb-sync1_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-sync1:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxcb-xfixes0:ppc64el. 195s Preparing to unpack .../100-libxcb-xfixes0_1.17.0-2_ppc64el.deb ... 195s Unpacking libxcb-xfixes0:ppc64el (1.17.0-2) ... 195s Selecting previously unselected package libxshmfence1:ppc64el. 195s Preparing to unpack .../101-libxshmfence1_1.3-1build5_ppc64el.deb ... 195s Unpacking libxshmfence1:ppc64el (1.3-1build5) ... 195s Selecting previously unselected package libxxf86vm1:ppc64el. 195s Preparing to unpack .../102-libxxf86vm1_1%3a1.1.4-1build4_ppc64el.deb ... 195s Unpacking libxxf86vm1:ppc64el (1:1.1.4-1build4) ... 195s Selecting previously unselected package libvulkan1:ppc64el. 195s Preparing to unpack .../103-libvulkan1_1.3.283.0-1_ppc64el.deb ... 195s Unpacking libvulkan1:ppc64el (1.3.283.0-1) ... 195s Selecting previously unselected package libdrm-amdgpu1:ppc64el. 195s Preparing to unpack .../104-libdrm-amdgpu1_2.4.121-2_ppc64el.deb ... 195s Unpacking libdrm-amdgpu1:ppc64el (2.4.121-2) ... 195s Selecting previously unselected package libdrm-nouveau2:ppc64el. 195s Preparing to unpack .../105-libdrm-nouveau2_2.4.121-2_ppc64el.deb ... 195s Unpacking libdrm-nouveau2:ppc64el (2.4.121-2) ... 195s Selecting previously unselected package libdrm-radeon1:ppc64el. 195s Preparing to unpack .../106-libdrm-radeon1_2.4.121-2_ppc64el.deb ... 195s Unpacking libdrm-radeon1:ppc64el (2.4.121-2) ... 195s Selecting previously unselected package libllvm17t64:ppc64el. 195s Preparing to unpack .../107-libllvm17t64_1%3a17.0.6-12_ppc64el.deb ... 195s Unpacking libllvm17t64:ppc64el (1:17.0.6-12) ... 196s Selecting previously unselected package libgl1-mesa-dri:ppc64el. 196s Preparing to unpack .../108-libgl1-mesa-dri_24.0.9-0ubuntu2_ppc64el.deb ... 196s Unpacking libgl1-mesa-dri:ppc64el (24.0.9-0ubuntu2) ... 197s Selecting previously unselected package libglx-mesa0:ppc64el. 197s Preparing to unpack .../109-libglx-mesa0_24.0.9-0ubuntu2_ppc64el.deb ... 197s Unpacking libglx-mesa0:ppc64el (24.0.9-0ubuntu2) ... 197s Selecting previously unselected package libglx0:ppc64el. 197s Preparing to unpack .../110-libglx0_1.7.0-1build1_ppc64el.deb ... 197s Unpacking libglx0:ppc64el (1.7.0-1build1) ... 197s Selecting previously unselected package libgl1:ppc64el. 197s Preparing to unpack .../111-libgl1_1.7.0-1build1_ppc64el.deb ... 197s Unpacking libgl1:ppc64el (1.7.0-1build1) ... 197s Selecting previously unselected package libasound2-data. 197s Preparing to unpack .../112-libasound2-data_1.2.12-1_all.deb ... 197s Unpacking libasound2-data (1.2.12-1) ... 197s Selecting previously unselected package libasound2t64:ppc64el. 197s Preparing to unpack .../113-libasound2t64_1.2.12-1_ppc64el.deb ... 197s Unpacking libasound2t64:ppc64el (1.2.12-1) ... 197s Selecting previously unselected package libgif7:ppc64el. 197s Preparing to unpack .../114-libgif7_5.2.2-1ubuntu1_ppc64el.deb ... 197s Unpacking libgif7:ppc64el (5.2.2-1ubuntu1) ... 197s Selecting previously unselected package x11-common. 197s Preparing to unpack .../115-x11-common_1%3a7.7+23ubuntu3_all.deb ... 197s Unpacking x11-common (1:7.7+23ubuntu3) ... 197s Selecting previously unselected package libxtst6:ppc64el. 197s Preparing to unpack .../116-libxtst6_2%3a1.2.3-1.1build1_ppc64el.deb ... 197s Unpacking libxtst6:ppc64el (2:1.2.3-1.1build1) ... 197s Selecting previously unselected package openjdk-21-jre:ppc64el. 197s Preparing to unpack .../117-openjdk-21-jre_21.0.4+7-1ubuntu2_ppc64el.deb ... 197s Unpacking openjdk-21-jre:ppc64el (21.0.4+7-1ubuntu2) ... 197s Selecting previously unselected package default-jre. 197s Preparing to unpack .../118-default-jre_2%3a1.21-75+exp1_ppc64el.deb ... 197s Unpacking default-jre (2:1.21-75+exp1) ... 197s Selecting previously unselected package cgview. 197s Preparing to unpack .../119-cgview_0.0.20100111-7_all.deb ... 197s Unpacking cgview (0.0.20100111-7) ... 197s Selecting previously unselected package ncbi-data. 197s Preparing to unpack .../120-ncbi-data_6.1.20170106+dfsg2-3_all.deb ... 197s Unpacking ncbi-data (6.1.20170106+dfsg2-3) ... 197s Selecting previously unselected package libmbedcrypto7t64:ppc64el. 197s Preparing to unpack .../121-libmbedcrypto7t64_2.28.8-1_ppc64el.deb ... 197s Unpacking libmbedcrypto7t64:ppc64el (2.28.8-1) ... 197s Selecting previously unselected package libmbedx509-1t64:ppc64el. 197s Preparing to unpack .../122-libmbedx509-1t64_2.28.8-1_ppc64el.deb ... 197s Unpacking libmbedx509-1t64:ppc64el (2.28.8-1) ... 197s Selecting previously unselected package libmbedtls14t64:ppc64el. 197s Preparing to unpack .../123-libmbedtls14t64_2.28.8-1_ppc64el.deb ... 197s Unpacking libmbedtls14t64:ppc64el (2.28.8-1) ... 197s Selecting previously unselected package ncbi-blast+. 197s Preparing to unpack .../124-ncbi-blast+_2.16.0+ds-3_ppc64el.deb ... 197s Unpacking ncbi-blast+ (2.16.0+ds-3) ... 198s Selecting previously unselected package ncbi-blast+-legacy. 198s Preparing to unpack .../125-ncbi-blast+-legacy_2.16.0+ds-3_all.deb ... 198s Unpacking ncbi-blast+-legacy (2.16.0+ds-3) ... 198s Selecting previously unselected package imagemagick-6.q16. 198s Preparing to unpack .../126-imagemagick-6.q16_8%3a6.9.13.12+dfsg1-1_ppc64el.deb ... 198s Unpacking imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... 198s Selecting previously unselected package imagemagick. 198s Preparing to unpack .../127-imagemagick_8%3a6.9.13.12+dfsg1-1_ppc64el.deb ... 198s Unpacking imagemagick (8:6.9.13.12+dfsg1-1) ... 198s Selecting previously unselected package liberror-perl. 198s Preparing to unpack .../128-liberror-perl_0.17029-2_all.deb ... 198s Unpacking liberror-perl (0.17029-2) ... 198s Selecting previously unselected package libtie-ixhash-perl. 198s Preparing to unpack .../129-libtie-ixhash-perl_1.23-4_all.deb ... 198s Unpacking libtie-ixhash-perl (1.23-4) ... 198s Selecting previously unselected package libencode-locale-perl. 198s Preparing to unpack .../130-libencode-locale-perl_1.05-3_all.deb ... 198s Unpacking libencode-locale-perl (1.05-3) ... 198s Selecting previously unselected package libtimedate-perl. 198s Preparing to unpack .../131-libtimedate-perl_2.3300-2_all.deb ... 198s Unpacking libtimedate-perl (2.3300-2) ... 198s Selecting previously unselected package libhttp-date-perl. 198s Preparing to unpack .../132-libhttp-date-perl_6.06-1_all.deb ... 198s Unpacking libhttp-date-perl (6.06-1) ... 198s Selecting previously unselected package libfile-listing-perl. 198s Preparing to unpack .../133-libfile-listing-perl_6.16-1_all.deb ... 198s Unpacking libfile-listing-perl (6.16-1) ... 198s Selecting previously unselected package libhtml-tagset-perl. 198s Preparing to unpack .../134-libhtml-tagset-perl_3.24-1_all.deb ... 198s Unpacking libhtml-tagset-perl (3.24-1) ... 198s Selecting previously unselected package liburi-perl. 198s Preparing to unpack .../135-liburi-perl_5.28-1_all.deb ... 198s Unpacking liburi-perl (5.28-1) ... 198s Selecting previously unselected package libhtml-parser-perl:ppc64el. 198s Preparing to unpack .../136-libhtml-parser-perl_3.82-1_ppc64el.deb ... 198s Unpacking libhtml-parser-perl:ppc64el (3.82-1) ... 198s Selecting previously unselected package libhtml-tree-perl. 198s Preparing to unpack .../137-libhtml-tree-perl_5.07-3_all.deb ... 198s Unpacking libhtml-tree-perl (5.07-3) ... 198s Selecting previously unselected package libclone-perl:ppc64el. 198s Preparing to unpack .../138-libclone-perl_0.46-1build3_ppc64el.deb ... 198s Unpacking libclone-perl:ppc64el (0.46-1build3) ... 198s Selecting previously unselected package libio-html-perl. 198s Preparing to unpack .../139-libio-html-perl_1.004-3_all.deb ... 198s Unpacking libio-html-perl (1.004-3) ... 198s Selecting previously unselected package liblwp-mediatypes-perl. 198s Preparing to unpack .../140-liblwp-mediatypes-perl_6.04-2_all.deb ... 198s Unpacking liblwp-mediatypes-perl (6.04-2) ... 198s Selecting previously unselected package libhttp-message-perl. 198s Preparing to unpack .../141-libhttp-message-perl_6.46-1ubuntu1_all.deb ... 198s Unpacking libhttp-message-perl (6.46-1ubuntu1) ... 198s Selecting previously unselected package libhttp-cookies-perl. 198s Preparing to unpack .../142-libhttp-cookies-perl_6.11-1_all.deb ... 198s Unpacking libhttp-cookies-perl (6.11-1) ... 198s Selecting previously unselected package libhttp-negotiate-perl. 198s Preparing to unpack .../143-libhttp-negotiate-perl_6.01-2_all.deb ... 198s Unpacking libhttp-negotiate-perl (6.01-2) ... 198s Selecting previously unselected package perl-openssl-defaults:ppc64el. 198s Preparing to unpack .../144-perl-openssl-defaults_7build3_ppc64el.deb ... 198s Unpacking perl-openssl-defaults:ppc64el (7build3) ... 198s Selecting previously unselected package libnet-ssleay-perl:ppc64el. 198s Preparing to unpack .../145-libnet-ssleay-perl_1.94-1build4_ppc64el.deb ... 198s Unpacking libnet-ssleay-perl:ppc64el (1.94-1build4) ... 198s Selecting previously unselected package libio-socket-ssl-perl. 198s Preparing to unpack .../146-libio-socket-ssl-perl_2.088-1_all.deb ... 198s Unpacking libio-socket-ssl-perl (2.088-1) ... 198s Selecting previously unselected package libnet-http-perl. 198s Preparing to unpack .../147-libnet-http-perl_6.23-1_all.deb ... 198s Unpacking libnet-http-perl (6.23-1) ... 198s Selecting previously unselected package liblwp-protocol-https-perl. 198s Preparing to unpack .../148-liblwp-protocol-https-perl_6.14-1_all.deb ... 198s Unpacking liblwp-protocol-https-perl (6.14-1) ... 198s Selecting previously unselected package libtry-tiny-perl. 198s Preparing to unpack .../149-libtry-tiny-perl_0.31-2_all.deb ... 198s Unpacking libtry-tiny-perl (0.31-2) ... 199s Selecting previously unselected package libwww-robotrules-perl. 199s Preparing to unpack .../150-libwww-robotrules-perl_6.02-1_all.deb ... 199s Unpacking libwww-robotrules-perl (6.02-1) ... 199s Selecting previously unselected package libwww-perl. 199s Preparing to unpack .../151-libwww-perl_6.77-1_all.deb ... 199s Unpacking libwww-perl (6.77-1) ... 199s Selecting previously unselected package cct. 199s Preparing to unpack .../152-cct_1%3a1.0.3-1_all.deb ... 199s Unpacking cct (1:1.0.3-1) ... 199s Selecting previously unselected package cct-examples. 199s Preparing to unpack .../153-cct-examples_1%3a1.0.3-1_all.deb ... 199s Unpacking cct-examples (1:1.0.3-1) ... 200s Selecting previously unselected package autopkgtest-satdep. 200s Preparing to unpack .../154-1-autopkgtest-satdep.deb ... 200s Unpacking autopkgtest-satdep (0) ... 200s Setting up libxcb-dri3-0:ppc64el (1.17.0-2) ... 200s Setting up liblcms2-2:ppc64el (2.14-2build1) ... 200s Setting up ncbi-data (6.1.20170106+dfsg2-3) ... 200s Setting up libpixman-1-0:ppc64el (0.42.2-1build1) ... 200s Setting up libx11-xcb1:ppc64el (2:1.8.7-1build1) ... 200s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 202s Regenerating fonts cache... done. 202s Setting up imagemagick-6-common (8:6.9.13.12+dfsg1-1) ... 202s Setting up libdrm-nouveau2:ppc64el (2.4.121-2) ... 202s Setting up libtie-ixhash-perl (1.23-4) ... 202s Setting up libxdamage1:ppc64el (1:1.1.6-1build1) ... 202s Setting up libxcb-xfixes0:ppc64el (1.17.0-2) ... 202s Setting up hicolor-icon-theme (0.18-1) ... 202s Setting up libxi6:ppc64el (2:1.8.1-1build1) ... 202s Setting up libmbedcrypto7t64:ppc64el (2.28.8-1) ... 202s Setting up java-common (0.75+exp1) ... 202s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 202s Setting up libdatrie1:ppc64el (0.2.13-3build1) ... 202s Setting up libtest-deep-perl (1.204-1) ... 202s Setting up libxcb-render0:ppc64el (1.17.0-2) ... 202s Setting up libclone-perl:ppc64el (0.46-1build3) ... 202s Setting up libalgorithm-diff-perl (1.201-1) ... 202s Setting up libdrm-radeon1:ppc64el (2.4.121-2) ... 202s Setting up libglvnd0:ppc64el (1.7.0-1build1) ... 202s Setting up libhtml-tagset-perl (3.24-1) ... 202s Setting up libxcb-glx0:ppc64el (1.17.0-2) ... 202s Setting up libwebpdemux2:ppc64el (1.4.0-0.1) ... 202s Setting up unzip (6.0-28ubuntu5) ... 202s Setting up liblwp-mediatypes-perl (6.04-2) ... 202s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 202s Setting up x11-common (1:7.7+23ubuntu3) ... 203s Setting up libtry-tiny-perl (0.31-2) ... 203s Setting up perl-openssl-defaults:ppc64el (7build3) ... 203s Setting up libencode-locale-perl (1.05-3) ... 203s Setting up libxcb-shm0:ppc64el (1.17.0-2) ... 203s Setting up libcairo2:ppc64el (1.18.0-3build1) ... 203s Setting up libcolord2:ppc64el (1.4.7-1build2) ... 203s Setting up libxxf86vm1:ppc64el (1:1.1.4-1build4) ... 203s Setting up libxcb-present0:ppc64el (1.17.0-2) ... 203s Setting up liberror-perl (0.17029-2) ... 203s Setting up libdconf1:ppc64el (0.40.0-4build2) ... 203s Setting up libasound2-data (1.2.12-1) ... 203s Setting up libio-string-perl (1.08-4) ... 203s Setting up libclass-data-inheritable-perl (0.08-3) ... 203s Setting up libasound2t64:ppc64el (1.2.12-1) ... 203s Setting up libllvm17t64:ppc64el (1:17.0.6-12) ... 203s Setting up libepoxy0:ppc64el (1.5.10-1build1) ... 203s Setting up libtext-diff-perl (1.45-2) ... 203s Setting up libxfixes3:ppc64el (1:6.0.0-2build1) ... 203s Setting up libxcb-sync1:ppc64el (1.17.0-2) ... 203s Setting up libapache-pom-java (29-2) ... 203s Setting up libavahi-common-data:ppc64el (0.8-13ubuntu6) ... 203s Setting up libatspi2.0-0t64:ppc64el (2.52.0-1build1) ... 203s Setting up libxinerama1:ppc64el (2:1.1.4-3build1) ... 203s Setting up libxml-commons-resolver1.1-java (1.2-11) ... 203s Setting up libio-html-perl (1.004-3) ... 203s Setting up libxrandr2:ppc64el (2:1.5.4-1) ... 203s Setting up libpcsclite1:ppc64el (2.2.3-1) ... 203s Setting up libltdl7:ppc64el (2.4.7-7build1) ... 203s Setting up libfftw3-double3:ppc64el (3.3.10-1ubuntu3) ... 203s Setting up libglapi-mesa:ppc64el (24.0.9-0ubuntu2) ... 203s Setting up libraw23t64:ppc64el (0.21.2-2.1build1) ... 203s Setting up libvulkan1:ppc64el (1.3.283.0-1) ... 203s Setting up libcapture-tiny-perl (0.48-2) ... 203s Setting up libtimedate-perl (2.3300-2) ... 203s Setting up libxcb-dri2-0:ppc64el (1.17.0-2) ... 203s Setting up libgif7:ppc64el (5.2.2-1ubuntu1) ... 203s Setting up libdata-stag-perl (0.14-3) ... 203s Setting up liblqr-1-0:ppc64el (0.4.2-2.1build2) ... 203s Setting up libxshmfence1:ppc64el (1.3-1build5) ... 203s Setting up at-spi2-common (2.52.0-1build1) ... 203s Setting up libxcb-randr0:ppc64el (1.17.0-2) ... 203s Setting up libxml-commons-external-java (1.4.01-6) ... 203s Setting up libjargs-java (1.0.0-5) ... 203s Setting up libsub-uplevel-perl (0.2800-3) ... 203s Setting up libopenjp2-7:ppc64el (2.5.0-2build3) ... 203s Setting up libthai-data (0.1.29-2build1) ... 203s Setting up libgdk-pixbuf-2.0-0:ppc64el (2.42.12+dfsg-1) ... 203s Setting up libdevel-stacktrace-perl (2.0500-1) ... 203s Setting up libcairo-gobject2:ppc64el (1.18.0-3build1) ... 203s Setting up libwayland-egl1:ppc64el (1.22.0-2.1build1) ... 203s Setting up libbio-perl-perl (1.7.8-1) ... 203s Setting up ca-certificates-java (20240118) ... 203s No JRE found. Skipping Java certificates setup. 203s Setting up libxerces2-java (2.12.2-1) ... 203s Setting up libjaxp1.3-java (1.3.05-6) ... 203s Setting up libwebpmux3:ppc64el (1.4.0-0.1) ... 203s Setting up libxcomposite1:ppc64el (1:0.4.5-1build3) ... 203s Setting up liburi-perl (5.28-1) ... 203s Setting up libdrm-amdgpu1:ppc64el (2.4.121-2) ... 203s Setting up libwayland-client0:ppc64el (1.22.0-2.1build1) ... 203s Setting up libnet-ssleay-perl:ppc64el (1.94-1build4) ... 203s Setting up gtk-update-icon-cache (3.24.43-1ubuntu1) ... 203s Setting up libhttp-date-perl (6.06-1) ... 203s Setting up libmbedx509-1t64:ppc64el (2.28.8-1) ... 203s Setting up java-wrappers (0.4) ... 203s Setting up libatk1.0-0t64:ppc64el (2.52.0-1build1) ... 203s Setting up libfile-listing-perl (6.16-1) ... 203s Setting up openjdk-21-jre-headless:ppc64el (21.0.4+7-1ubuntu2) ... 203s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/java to provide /usr/bin/java (java) in auto mode 203s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 203s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 203s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 203s update-alternatives: using /usr/lib/jvm/java-21-openjdk-ppc64el/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 203s Setting up libxtst6:ppc64el (2:1.2.3-1.1build1) ... 203s Setting up libtest-warn-perl (0.37-2) ... 203s Setting up libxcursor1:ppc64el (1:1.2.2-1) ... 203s Setting up libgl1-mesa-dri:ppc64el (24.0.9-0ubuntu2) ... 203s Setting up libcommons-parent-java (56-1) ... 203s Setting up libavahi-common3:ppc64el (0.8-13ubuntu6) ... 203s Setting up libtest-differences-perl (0.71-1) ... 203s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 203s Setting up libnet-http-perl (6.23-1) ... 203s Setting up libmagickcore-6.q16-7t64:ppc64el (8:6.9.13.12+dfsg1-1) ... 203s Setting up dconf-service (0.40.0-4build2) ... 203s Setting up libexception-class-perl (1.45-1) ... 203s Setting up libcommons-lang-java (2.6-10) ... 203s Setting up libmagickwand-6.q16-7t64:ppc64el (8:6.9.13.12+dfsg1-1) ... 203s Setting up libthai0:ppc64el (0.1.29-2build1) ... 203s Setting up libtest-exception-perl (0.43-3) ... 203s Setting up imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... 203s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode 203s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode 203s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode 203s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode 203s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode 203s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode 203s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode 203s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode 203s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode 203s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode 203s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode 203s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode 203s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode 203s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode 203s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode 203s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode 203s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode 203s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode 203s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode 203s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode 203s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode 203s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode 203s Setting up libwww-robotrules-perl (6.02-1) ... 203s Setting up libmbedtls14t64:ppc64el (2.28.8-1) ... 203s Setting up libwayland-cursor0:ppc64el (1.22.0-2.1build1) ... 203s Setting up libhtml-parser-perl:ppc64el (3.82-1) ... 203s Setting up libavahi-client3:ppc64el (0.8-13ubuntu6) ... 203s Setting up libio-socket-ssl-perl (2.088-1) ... 203s Setting up libhttp-message-perl (6.46-1ubuntu1) ... 203s Setting up libatk-bridge2.0-0t64:ppc64el (2.52.0-1build1) ... 203s Setting up libhttp-negotiate-perl (6.01-2) ... 203s Setting up libglx-mesa0:ppc64el (24.0.9-0ubuntu2) ... 203s Setting up libglx0:ppc64el (1.7.0-1build1) ... 203s Setting up dconf-gsettings-backend:ppc64el (0.40.0-4build2) ... 203s Setting up libhttp-cookies-perl (6.11-1) ... 203s Setting up libtest-most-perl (0.38-1) ... 203s Setting up libcommons-io-java (2.16.1-1) ... 203s Setting up libhtml-tree-perl (5.07-3) ... 203s Setting up libpango-1.0-0:ppc64el (1.54.0+ds-1) ... 203s Setting up libxmlgraphics-commons-java (2.8-2) ... 203s Setting up ncbi-blast+ (2.16.0+ds-3) ... 203s Setting up libgl1:ppc64el (1.7.0-1build1) ... 203s Setting up imagemagick (8:6.9.13.12+dfsg1-1) ... 203s Setting up libpangoft2-1.0-0:ppc64el (1.54.0+ds-1) ... 203s Setting up libcups2t64:ppc64el (2.4.7-1.2ubuntu9) ... 203s Setting up libgtk-3-common (3.24.43-1ubuntu1) ... 203s Setting up libpangocairo-1.0-0:ppc64el (1.54.0+ds-1) ... 203s Setting up bioperl (1.7.8-1) ... 203s Setting up ncbi-blast+-legacy (2.16.0+ds-3) ... 203s Setting up libbatik-java (1.17+dfsg-1) ... 203s Setting up adwaita-icon-theme (46.0-1) ... 203s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 203s Setting up libwww-perl (6.77-1) ... 203s Setting up humanity-icon-theme (0.6.16) ... 204s Setting up liblwp-protocol-https-perl (6.14-1) ... 204s Setting up ubuntu-mono (24.04-0ubuntu1) ... 204s Processing triggers for man-db (2.12.1-2) ... 209s Processing triggers for libglib2.0-0t64:ppc64el (2.80.4-1ubuntu1) ... 209s Setting up libgtk-3-0t64:ppc64el (3.24.43-1ubuntu1) ... 209s Processing triggers for libc-bin (2.39-0ubuntu9) ... 209s Processing triggers for ca-certificates-java (20240118) ... 210s Adding debian:ACCVRAIZ1.pem 210s Adding debian:AC_RAIZ_FNMT-RCM.pem 210s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 210s Adding debian:ANF_Secure_Server_Root_CA.pem 210s Adding debian:Actalis_Authentication_Root_CA.pem 210s Adding debian:AffirmTrust_Commercial.pem 210s Adding debian:AffirmTrust_Networking.pem 210s Adding debian:AffirmTrust_Premium.pem 210s Adding debian:AffirmTrust_Premium_ECC.pem 210s Adding debian:Amazon_Root_CA_1.pem 210s Adding debian:Amazon_Root_CA_2.pem 210s Adding debian:Amazon_Root_CA_3.pem 210s Adding debian:Amazon_Root_CA_4.pem 210s Adding debian:Atos_TrustedRoot_2011.pem 210s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 210s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 210s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 210s Adding debian:BJCA_Global_Root_CA1.pem 210s Adding debian:BJCA_Global_Root_CA2.pem 210s Adding debian:Baltimore_CyberTrust_Root.pem 210s Adding debian:Buypass_Class_2_Root_CA.pem 210s Adding debian:Buypass_Class_3_Root_CA.pem 210s Adding debian:CA_Disig_Root_R2.pem 210s Adding debian:CFCA_EV_ROOT.pem 210s Adding debian:COMODO_Certification_Authority.pem 210s Adding debian:COMODO_ECC_Certification_Authority.pem 210s Adding debian:COMODO_RSA_Certification_Authority.pem 210s Adding debian:Certainly_Root_E1.pem 210s Adding debian:Certainly_Root_R1.pem 210s Adding debian:Certigna.pem 210s Adding debian:Certigna_Root_CA.pem 210s Adding debian:Certum_EC-384_CA.pem 210s Adding debian:Certum_Trusted_Network_CA.pem 210s Adding debian:Certum_Trusted_Network_CA_2.pem 210s Adding debian:Certum_Trusted_Root_CA.pem 210s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 210s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 210s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 210s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 210s Adding debian:Comodo_AAA_Services_root.pem 210s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 210s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 210s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 210s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 210s Adding debian:DigiCert_Assured_ID_Root_CA.pem 210s Adding debian:DigiCert_Assured_ID_Root_G2.pem 210s Adding debian:DigiCert_Assured_ID_Root_G3.pem 210s Adding debian:DigiCert_Global_Root_CA.pem 210s Adding debian:DigiCert_Global_Root_G2.pem 210s Adding debian:DigiCert_Global_Root_G3.pem 210s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 210s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 210s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 210s Adding debian:DigiCert_Trusted_Root_G4.pem 210s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 210s Adding debian:Entrust_Root_Certification_Authority.pem 210s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 210s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 210s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 210s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 210s Adding debian:GLOBALTRUST_2020.pem 210s Adding debian:GTS_Root_R1.pem 210s Adding debian:GTS_Root_R2.pem 210s Adding debian:GTS_Root_R3.pem 210s Adding debian:GTS_Root_R4.pem 210s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 210s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 210s Adding debian:GlobalSign_Root_CA.pem 210s Adding debian:GlobalSign_Root_CA_-_R3.pem 210s Adding debian:GlobalSign_Root_CA_-_R6.pem 210s Adding debian:GlobalSign_Root_E46.pem 210s Adding debian:GlobalSign_Root_R46.pem 210s Adding debian:Go_Daddy_Class_2_CA.pem 210s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 210s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 210s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 210s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 210s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 210s Adding debian:HiPKI_Root_CA_-_G1.pem 210s Adding debian:Hongkong_Post_Root_CA_3.pem 210s Adding debian:ISRG_Root_X1.pem 210s Adding debian:ISRG_Root_X2.pem 210s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 210s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 210s Adding debian:Izenpe.com.pem 210s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 210s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 210s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 210s Adding debian:NAVER_Global_Root_Certification_Authority.pem 210s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 210s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 210s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 210s Adding debian:QuoVadis_Root_CA_1_G3.pem 210s Adding debian:QuoVadis_Root_CA_2.pem 210s Adding debian:QuoVadis_Root_CA_2_G3.pem 210s Adding debian:QuoVadis_Root_CA_3.pem 210s Adding debian:QuoVadis_Root_CA_3_G3.pem 210s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 210s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 210s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 210s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 210s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 210s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 210s Adding debian:SZAFIR_ROOT_CA2.pem 210s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 210s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 210s Adding debian:SecureSign_RootCA11.pem 210s Adding debian:SecureTrust_CA.pem 210s Adding debian:Secure_Global_CA.pem 210s Adding debian:Security_Communication_ECC_RootCA1.pem 210s Adding debian:Security_Communication_RootCA2.pem 210s Adding debian:Security_Communication_RootCA3.pem 210s Adding debian:Security_Communication_Root_CA.pem 210s Adding debian:Starfield_Class_2_CA.pem 210s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 210s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 210s Adding debian:SwissSign_Gold_CA_-_G2.pem 210s Adding debian:SwissSign_Silver_CA_-_G2.pem 210s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 210s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 210s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 210s Adding debian:TWCA_Global_Root_CA.pem 210s Adding debian:TWCA_Root_Certification_Authority.pem 210s Adding debian:TeliaSonera_Root_CA_v1.pem 210s Adding debian:Telia_Root_CA_v2.pem 210s Adding debian:TrustAsia_Global_Root_CA_G3.pem 210s Adding debian:TrustAsia_Global_Root_CA_G4.pem 210s Adding debian:Trustwave_Global_Certification_Authority.pem 210s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 210s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 211s Adding debian:TunTrust_Root_CA.pem 211s Adding debian:UCA_Extended_Validation_Root.pem 211s Adding debian:UCA_Global_G2_Root.pem 211s Adding debian:USERTrust_ECC_Certification_Authority.pem 211s Adding debian:USERTrust_RSA_Certification_Authority.pem 211s Adding debian:XRamp_Global_CA_Root.pem 211s Adding debian:certSIGN_ROOT_CA.pem 211s Adding debian:certSIGN_Root_CA_G2.pem 211s Adding debian:e-Szigno_Root_CA_2017.pem 211s Adding debian:ePKI_Root_Certification_Authority.pem 211s Adding debian:emSign_ECC_Root_CA_-_C3.pem 211s Adding debian:emSign_ECC_Root_CA_-_G3.pem 211s Adding debian:emSign_Root_CA_-_C1.pem 211s Adding debian:emSign_Root_CA_-_G1.pem 211s Adding debian:vTrus_ECC_Root_CA.pem 211s Adding debian:vTrus_Root_CA.pem 211s done. 211s Setting up openjdk-21-jre:ppc64el (21.0.4+7-1ubuntu2) ... 211s Setting up default-jre-headless (2:1.21-75+exp1) ... 211s Setting up default-jre (2:1.21-75+exp1) ... 211s Setting up cgview (0.0.20100111-7) ... 211s Setting up cct (1:1.0.3-1) ... 211s Setting up cct-examples (1:1.0.3-1) ... 211s Setting up autopkgtest-satdep (0) ... 217s (Reading database ... 90212 files and directories currently installed.) 217s Removing autopkgtest-satdep (0) ... 217s autopkgtest [02:25:07]: test run-unit-test: [----------------------- 218s 'Check environment' test passed 218s Copying and extracting COG files 219s Preparing COG BLAST database 226s COG BLAST database created 226s Processing project 'test_tblastx' 226s Processing project 'test_tblastx' using configuration 'project_settings.conf' 226s [Saturday July 27 02:25:16 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastx/project_settings.conf. 226s [Saturday July 27 02:25:16 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome for BLAST searches. 226s [Saturday July 27 02:25:16 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_tblastx/reference_genome/split. 226s [Saturday July 27 02:25:16 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastx/comparison_genomes for BLAST searches. 227s [Saturday July 27 02:25:17 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split. 227s [Saturday July 27 02:25:17 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split. 227s [Saturday July 27 02:25:17 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastx/blast/blast_db. 227s [Saturday July 27 02:25:17 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_tblastx/blast/blast_db. 228s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 228s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx to view the BLAST results. 228s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 228s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results. 228s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 228s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Writing HSP to file. 228s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx to view the BLAST results. 228s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 229s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Writing HSP to file. 229s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results. 229s [Saturday July 27 02:25:19 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local. 229s [Saturday July 27 02:25:19 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome. 229s [Saturday July 27 02:25:19 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastx/features. 229s [Saturday July 27 02:25:19 2024] [Notice] Creating CGView XML files. 229s [Saturday July 27 02:25:19 2024] [Notice] The following BLAST results will be drawn, from outside to center: 229s [Saturday July 27 02:25:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx 229s [Saturday July 27 02:25:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx 229s [Saturday July 27 02:25:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx 229s [Saturday July 27 02:25:19 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx 229s Creating XML for feature sets on the outside of the backbone circle. 229s Feature sets written first are drawn closest to the backbone circle. 229s Creating XML for ORFs that are in reading frame +1. 229s Creating XML for ORFs that are in reading frame +2. 229s Creating XML for ORFs that are in reading frame +3. 229s Creating XML for feature sets on the inside of the backbone circle. 229s Feature sets written first are drawn closest to the backbone circle. 229s Creating XML for ORFs that are in reading frame -1. 229s Creating XML for ORFs that are in reading frame -2. 229s Creating XML for ORFs that are in reading frame -3. 229s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx. 229s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx. 229s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx. 229s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx. 229s Creating XML for GC content information. 229s Plotting GC content using a window size of 500 and a step of 1. 229s The maximum GC content value is 0.5768. 229s The minimum GC content value is 0.4311. 229s The average GC content value is 0.5051. 229s GC content will be scaled based on the maximum and minimum values. 229s GC content will be plotted as the deviation from the average value. 229s Creating XML for GC skew information. 229s Plotting GC skew using a window size of 500 and a step of 1. 229s The maximum GC skew value is 0.1587. 229s The minimum GC skew value is -0.2263. 229s The average GC skew value is -0.0036. 229s GC skew will be scaled based on the maximum and minimum values. 229s GC skew will be plotted as the deviation from the average value. 229s CGView XML file complete. 229s The recommended CGView command is: 229s ---------------------------------- 229s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml/test_tblastx_project_settings.conf_medium.xml -o map.png 229s Success! 229s The following key-values were used: 229s ----------------------------------- 229s arrowheadLength=6 229s average=T 229s atColorNeg=rgb(51,51,51) 229s atColorPos=rgb(51,51,51) 229s at_content=F 229s atSkewColorNeg=rgb(0,0,153) 229s atSkewColorPos=rgb(153,153,0) 229s at_skew=F 229s backboneColor=rgb(102,102,102) 229s backboneRadius=1000 229s backboneThickness=8 229s backgroundColor=white 229s blast_divider_ruler=F 229s blastRulerColor=rgb(255,165,0) 229s borderColor=black 229s combined_orfs=F 229s details=T 229s draw_divider_rings=T 229s featureOpacity=0.5 229s featureOpacityOther=0.5 229s featureSlotSpacing=6 229s featureThickness=9.86 229s featureThicknessPlot=59.14 229s feature_labels=F 229s gcColorNeg=rgb(0,0,0) 229s gcColorPos=rgb(0,0,0) 229s gc_content=T 229s gcSkewColorNeg=rgb(153,0,153) 229s gcSkewColorPos=rgb(0,153,0) 229s gc_skew=T 229s gene_decoration=arrow 229s gene_labels=F 229s global_label=true 229s height=3000 229s hit_labels=F 229s labelFontSize=15 229s labelPlacementQuality=good 229s labelLineLength=200 229s labelLineThickness=4 229s legend=T 229s legendFontSize=20 229s orf_labels=F 229s maxLabelLength=20 229s maxLegendLength=30 229s maxTitleLength=50 229s minimumFeatureLength=0.2 229s moveInnerLabelsToOuter=false 229s orfColor=rgb(204,0,0) 229s orfs=T 229s orf_size=25 229s otherColor=rgb(51,51,51) 229s parse_reading_frame=T 229s proteinColor=rgb(0,0,153) 229s reading_frames=F 229s rRNAColor=rgb(153,0,153) 229s rulerFontColor=rgb(0,0,0) 229s rulerFontSize=30 229s rulerPadding=40 229s scale=T 229s scale_blast=T 229s show_sequence_features=T 229s show_queries=T 229s startColor=rgb(153,0,153) 229s starts=ttg|ctg|att|atc|ata|atg|gtg 229s step=1 229s stopColor=rgb(204,0,0) 229s stops=taa|tag|tga 229s title= 229s titleFontSize=80 229s tickColor=rgb(0,51,0) 229s tickLength=15 229s tickThickness=6 229s tick_density=0.166666666666667 229s tRNAColor=rgb(153,0,0) 229s useInnerLabels=true 229s use_opacity=F 229s width=3000 229s window=500 229s ----------------------------------- 229s [Saturday July 27 02:25:19 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml. 229s [Saturday July 27 02:25:19 2024] [Notice] Creating CGView maps. 230s Parsing XML input. 235s Drawing features.................................................................. 235s Positioning and drawing 0 labels.......................... 235s 0 labels were removed. 235s Drawing tick marks. 235s Drawing legends. 235s The map has been drawn. 235s Writing picture to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.png 236s Writing HTML to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.html 236s [Saturday July 27 02:25:26 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastx/maps. 236s Processing project 'test_blastn' 236s Processing project 'test_blastn' using configuration 'project_settings.conf' 236s [Saturday July 27 02:25:26 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastn/project_settings.conf. 236s [Saturday July 27 02:25:26 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome for BLAST searches. 237s [Saturday July 27 02:25:26 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastn/reference_genome/split. 237s [Saturday July 27 02:25:26 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_blastn/comparison_genomes for BLAST searches. 237s [Saturday July 27 02:25:27 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_blastn/comparison_genomes/split. 237s [Saturday July 27 02:25:27 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastn/comparison_genomes/split. 237s [Saturday July 27 02:25:27 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastn/blast/blast_db. 237s [Saturday July 27 02:25:27 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastn/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastn/blast/blast_db. 238s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 238s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Writing HSP to file. 238s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn to view the BLAST results. 238s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 238s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Writing HSP to file. 238s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results. 238s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 238s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Writing HSP to file. 238s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn to view the BLAST results. 238s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 238s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Writing HSP to file. 238s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results. 238s [Saturday July 27 02:25:28 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastn/blast/blast_results_local. 238s [Saturday July 27 02:25:28 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome. 238s [Saturday July 27 02:25:28 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastn/features. 238s [Saturday July 27 02:25:28 2024] [Notice] Creating CGView XML files. 238s [Saturday July 27 02:25:28 2024] [Notice] The following BLAST results will be drawn, from outside to center: 238s [Saturday July 27 02:25:28 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn 238s [Saturday July 27 02:25:28 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn 238s [Saturday July 27 02:25:28 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn 238s [Saturday July 27 02:25:28 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn 239s Creating XML for feature sets on the outside of the backbone circle. 239s Feature sets written first are drawn closest to the backbone circle. 239s Creating XML for ORFs that are in reading frame +1. 239s Creating XML for ORFs that are in reading frame +2. 239s Creating XML for ORFs that are in reading frame +3. 239s Creating XML for feature sets on the inside of the backbone circle. 239s Feature sets written first are drawn closest to the backbone circle. 239s Creating XML for ORFs that are in reading frame -1. 239s Creating XML for ORFs that are in reading frame -2. 239s Creating XML for ORFs that are in reading frame -3. 239s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn. 239s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn. 239s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn. 239s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn. 239s Creating XML for GC content information. 239s Plotting GC content using a window size of 500 and a step of 1. 239s The maximum GC content value is 0.5768. 239s The minimum GC content value is 0.4311. 239s The average GC content value is 0.5051. 239s GC content will be scaled based on the maximum and minimum values. 239s GC content will be plotted as the deviation from the average value. 239s Creating XML for GC skew information. 239s Plotting GC skew using a window size of 500 and a step of 1. 239s The maximum GC skew value is 0.1587. 239s The minimum GC skew value is -0.2263. 239s The average GC skew value is -0.0036. 239s GC skew will be scaled based on the maximum and minimum values. 239s GC skew will be plotted as the deviation from the average value. 239s CGView XML file complete. 239s The recommended CGView command is: 239s ---------------------------------- 239s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastn/maps/cgview_xml/test_blastn_project_settings.conf_medium.xml -o map.png 239s Success! 239s The following key-values were used: 239s ----------------------------------- 239s arrowheadLength=6 239s average=T 239s atColorNeg=rgb(51,51,51) 239s atColorPos=rgb(51,51,51) 239s at_content=F 239s atSkewColorNeg=rgb(0,0,153) 239s atSkewColorPos=rgb(153,153,0) 239s at_skew=F 239s backboneColor=rgb(102,102,102) 239s backboneRadius=1000 239s backboneThickness=8 239s backgroundColor=white 239s blast_divider_ruler=F 239s blastRulerColor=rgb(255,165,0) 239s borderColor=black 239s combined_orfs=F 239s details=T 239s draw_divider_rings=T 239s featureOpacity=0.5 239s featureOpacityOther=0.5 239s featureSlotSpacing=6 239s featureThickness=24.27 239s featureThicknessPlot=145.64 239s feature_labels=F 239s gcColorNeg=rgb(0,0,0) 239s gcColorPos=rgb(0,0,0) 239s gc_content=T 239s gcSkewColorNeg=rgb(153,0,153) 239s gcSkewColorPos=rgb(0,153,0) 239s gc_skew=T 239s gene_decoration=arrow 239s gene_labels=F 239s global_label=true 239s height=3000 239s hit_labels=F 239s labelFontSize=15 239s labelPlacementQuality=good 239s labelLineLength=200 239s labelLineThickness=4 239s legend=T 239s legendFontSize=20 239s orf_labels=F 239s maxLabelLength=20 239s maxLegendLength=30 239s maxTitleLength=50 239s minimumFeatureLength=0.2 239s moveInnerLabelsToOuter=false 239s orfColor=rgb(204,0,0) 239s orfs=T 239s orf_size=25 239s otherColor=rgb(51,51,51) 239s parse_reading_frame=F 239s proteinColor=rgb(0,0,153) 239s reading_frames=F 239s rRNAColor=rgb(153,0,153) 239s rulerFontColor=rgb(0,0,0) 239s rulerFontSize=30 239s rulerPadding=40 239s scale=T 239s scale_blast=T 239s show_sequence_features=T 239s show_queries=F 239s startColor=rgb(153,0,153) 239s starts=ttg|ctg|att|atc|ata|atg|gtg 239s step=1 239s stopColor=rgb(204,0,0) 239s stops=taa|tag|tga 239s title= 239s titleFontSize=80 239s tickColor=rgb(0,51,0) 239s tickLength=15 239s tickThickness=6 239s tick_density=0.166666666666667 239s tRNAColor=rgb(153,0,0) 239s useInnerLabels=true 239s use_opacity=F 239s width=3000 239s window=500 239s ----------------------------------- 239s [Saturday July 27 02:25:29 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastn/maps/cgview_xml. 239s [Saturday July 27 02:25:29 2024] [Notice] Creating CGView maps. 239s Parsing XML input. 244s Drawing features.......................... 245s Positioning and drawing 0 labels.......................... 245s 0 labels were removed. 245s Drawing tick marks. 245s Drawing legends. 245s The map has been drawn. 245s Writing picture to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.png 245s Writing HTML to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.html 246s [Saturday July 27 02:25:35 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastn/maps. 246s Processing project 'test_blastx' 246s Processing project 'test_blastx' using configuration 'project_settings.conf' 246s [Saturday July 27 02:25:36 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastx/project_settings.conf. 246s [Saturday July 27 02:25:36 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome for BLAST searches. 246s [Saturday July 27 02:25:36 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastx/reference_genome/split. 246s [Saturday July 27 02:25:36 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastx/comparison_genomes for BLAST searches. 246s [Saturday July 27 02:25:36 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins. 246s [Saturday July 27 02:25:36 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins. 246s [Saturday July 27 02:25:36 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastx/blast/blast_db. 246s [Saturday July 27 02:25:36 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastx/blast/blast_db. 246s [Saturday July 27 02:25:36 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastx/blast/blast_results_local. 246s [Saturday July 27 02:25:36 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome. 246s [Saturday July 27 02:25:36 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastx/features. 246s [Saturday July 27 02:25:36 2024] [Notice] Creating CGView XML files. 246s Creating XML for feature sets on the outside of the backbone circle. 246s Feature sets written first are drawn closest to the backbone circle. 246s Creating XML for ORFs that are in reading frame +1. 246s Creating XML for ORFs that are in reading frame +2. 246s Creating XML for ORFs that are in reading frame +3. 246s Creating XML for feature sets on the inside of the backbone circle. 246s Feature sets written first are drawn closest to the backbone circle. 246s Creating XML for ORFs that are in reading frame -1. 246s Creating XML for ORFs that are in reading frame -2. 246s Creating XML for ORFs that are in reading frame -3. 246s Creating XML for GC content information. 246s Plotting GC content using a window size of 500 and a step of 1. 246s The maximum GC content value is 0.5768. 246s The minimum GC content value is 0.4311. 246s The average GC content value is 0.5051. 246s GC content will be scaled based on the maximum and minimum values. 246s GC content will be plotted as the deviation from the average value. 246s Creating XML for GC skew information. 246s Plotting GC skew using a window size of 500 and a step of 1. 246s The maximum GC skew value is 0.1587. 246s The minimum GC skew value is -0.2263. 246s The average GC skew value is -0.0036. 246s GC skew will be scaled based on the maximum and minimum values. 246s GC skew will be plotted as the deviation from the average value. 246s CGView XML file complete. 246s The recommended CGView command is: 246s ---------------------------------- 246s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastx/maps/cgview_xml/test_blastx_project_settings.conf_medium.xml -o map.png 246s Success! 246s The following key-values were used: 246s ----------------------------------- 246s arrowheadLength=6 246s average=T 246s atColorNeg=rgb(51,51,51) 246s atColorPos=rgb(51,51,51) 246s at_content=F 246s atSkewColorNeg=rgb(0,0,153) 246s atSkewColorPos=rgb(153,153,0) 246s at_skew=F 246s backboneColor=rgb(102,102,102) 246s backboneRadius=1000 246s backboneThickness=8 246s backgroundColor=white 246s blast_divider_ruler=F 246s blastRulerColor=rgb(255,165,0) 246s borderColor=black 246s combined_orfs=F 246s details=T 246s draw_divider_rings=T 246s featureOpacity=0.5 246s featureOpacityOther=0.5 246s featureSlotSpacing=6 246s featureThickness=30 246s featureThicknessPlot=186.00 246s feature_labels=F 246s gcColorNeg=rgb(0,0,0) 246s gcColorPos=rgb(0,0,0) 246s gc_content=T 246s gcSkewColorNeg=rgb(153,0,153) 246s gcSkewColorPos=rgb(0,153,0) 246s gc_skew=T 246s gene_decoration=arrow 246s gene_labels=F 246s global_label=true 246s height=3000 246s hit_labels=F 246s labelFontSize=15 246s labelPlacementQuality=good 246s labelLineLength=200 246s labelLineThickness=4 246s legend=T 246s legendFontSize=20 246s orf_labels=F 246s maxLabelLength=20 246s maxLegendLength=30 246s maxTitleLength=50 246s minimumFeatureLength=0.2 246s moveInnerLabelsToOuter=false 246s orfColor=rgb(204,0,0) 246s orfs=T 246s orf_size=25 246s otherColor=rgb(51,51,51) 246s parse_reading_frame=T 246s proteinColor=rgb(0,0,153) 246s reading_frames=F 246s rRNAColor=rgb(153,0,153) 246s rulerFontColor=rgb(0,0,0) 246s rulerFontSize=30 246s rulerPadding=40 246s scale=T 246s scale_blast=T 246s show_sequence_features=T 246s show_queries=T 246s startColor=rgb(153,0,153) 246s starts=ttg|ctg|att|atc|ata|atg|gtg 246s step=1 246s stopColor=rgb(204,0,0) 246s stops=taa|tag|tga 246s title= 246s titleFontSize=80 246s tickColor=rgb(0,51,0) 246s tickLength=15 246s tickThickness=6 246s tick_density=0.166666666666667 246s tRNAColor=rgb(153,0,0) 246s useInnerLabels=true 246s use_opacity=F 246s width=3000 246s window=500 246s ----------------------------------- 246s [Saturday July 27 02:25:36 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastx/maps/cgview_xml. 246s [Saturday July 27 02:25:36 2024] [Notice] Creating CGView maps. 247s Parsing XML input. 252s Drawing features.................. 252s Positioning and drawing 0 labels.......................... 252s 0 labels were removed. 252s Drawing tick marks. 252s Drawing legends. 252s The map has been drawn. 252s Writing picture to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.png 253s Writing HTML to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.html 253s [Saturday July 27 02:25:43 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastx/maps. 253s Processing project 'test_blastp' 253s Processing project 'test_blastp' using configuration 'project_settings.conf' 253s [Saturday July 27 02:25:43 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastp/project_settings.conf. 253s [Saturday July 27 02:25:43 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome for BLAST searches. 253s Extracting ORFs in reading frame 1 on strand 1. 253s Extracting ORFs in reading frame 2 on strand 1. 253s Extracting ORFs in reading frame 3 on strand 1. 253s Extracting ORFs in reading frame 1 on strand -1. 253s Extracting ORFs in reading frame 2 on strand -1. 253s Extracting ORFs in reading frame 3 on strand -1. 253s A total of 338 records were written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs. 253s [Saturday July 27 02:25:43 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs. 253s [Saturday July 27 02:25:43 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastp/comparison_genomes for BLAST searches. 253s [Saturday July 27 02:25:43 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins. 253s [Saturday July 27 02:25:43 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins. 253s [Saturday July 27 02:25:43 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastp/blast/blast_db. 253s [Saturday July 27 02:25:43 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastp/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_blastp/blast/blast_db. 253s [Saturday July 27 02:25:43 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastp/blast/blast_results_local. 253s [Saturday July 27 02:25:43 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome. 253s [Saturday July 27 02:25:43 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastp/features. 253s [Saturday July 27 02:25:43 2024] [Notice] Creating CGView XML files. 254s Creating XML for feature sets on the outside of the backbone circle. 254s Feature sets written first are drawn closest to the backbone circle. 254s Creating XML for ORFs that are in reading frame +1. 254s Creating XML for ORFs that are in reading frame +2. 254s Creating XML for ORFs that are in reading frame +3. 254s Creating XML for feature sets on the inside of the backbone circle. 254s Feature sets written first are drawn closest to the backbone circle. 254s Creating XML for ORFs that are in reading frame -1. 254s Creating XML for ORFs that are in reading frame -2. 254s Creating XML for ORFs that are in reading frame -3. 254s Creating XML for GC content information. 254s Plotting GC content using a window size of 500 and a step of 1. 254s The maximum GC content value is 0.5768. 254s The minimum GC content value is 0.4311. 254s The average GC content value is 0.5051. 254s GC content will be scaled based on the maximum and minimum values. 254s GC content will be plotted as the deviation from the average value. 254s Creating XML for GC skew information. 254s Plotting GC skew using a window size of 500 and a step of 1. 254s The maximum GC skew value is 0.1587. 254s The minimum GC skew value is -0.2263. 254s The average GC skew value is -0.0036. 254s GC skew will be scaled based on the maximum and minimum values. 254s GC skew will be plotted as the deviation from the average value. 254s CGView XML file complete. 254s The recommended CGView command is: 254s ---------------------------------- 254s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastp/maps/cgview_xml/test_blastp_project_settings.conf_medium.xml -o map.png 254s Success! 254s The following key-values were used: 254s ----------------------------------- 254s arrowheadLength=6 254s average=T 254s atColorNeg=rgb(51,51,51) 254s atColorPos=rgb(51,51,51) 254s at_content=F 254s atSkewColorNeg=rgb(0,0,153) 254s atSkewColorPos=rgb(153,153,0) 254s at_skew=F 254s backboneColor=rgb(102,102,102) 254s backboneRadius=1000 254s backboneThickness=8 254s backgroundColor=white 254s blast_divider_ruler=F 254s blastRulerColor=rgb(255,165,0) 254s borderColor=black 254s combined_orfs=F 254s details=T 254s draw_divider_rings=T 254s featureOpacity=0.5 254s featureOpacityOther=0.5 254s featureSlotSpacing=6 254s featureThickness=30 254s featureThicknessPlot=186.00 254s feature_labels=F 254s gcColorNeg=rgb(0,0,0) 254s gcColorPos=rgb(0,0,0) 254s gc_content=T 254s gcSkewColorNeg=rgb(153,0,153) 254s gcSkewColorPos=rgb(0,153,0) 254s gc_skew=T 254s gene_decoration=arrow 254s gene_labels=F 254s global_label=true 254s height=3000 254s hit_labels=F 254s labelFontSize=15 254s labelPlacementQuality=good 254s labelLineLength=200 254s labelLineThickness=4 254s legend=T 254s legendFontSize=20 254s orf_labels=F 254s maxLabelLength=20 254s maxLegendLength=30 254s maxTitleLength=50 254s minimumFeatureLength=0.2 254s moveInnerLabelsToOuter=false 254s orfColor=rgb(204,0,0) 254s orfs=T 254s orf_size=25 254s otherColor=rgb(51,51,51) 254s parse_reading_frame=F 254s proteinColor=rgb(0,0,153) 254s reading_frames=F 254s rRNAColor=rgb(153,0,153) 254s rulerFontColor=rgb(0,0,0) 254s rulerFontSize=30 254s rulerPadding=40 254s scale=T 254s scale_blast=T 254s show_sequence_features=T 254s show_queries=F 254s startColor=rgb(153,0,153) 254s starts=ttg|ctg|att|atc|ata|atg|gtg 254s step=1 254s stopColor=rgb(204,0,0) 254s stops=taa|tag|tga 254s title= 254s titleFontSize=80 254s tickColor=rgb(0,51,0) 254s tickLength=15 254s tickThickness=6 254s tick_density=0.166666666666667 254s tRNAColor=rgb(153,0,0) 254s useInnerLabels=true 254s use_opacity=F 254s width=3000 254s window=500 254s ----------------------------------- 254s [Saturday July 27 02:25:44 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastp/maps/cgview_xml. 254s [Saturday July 27 02:25:44 2024] [Notice] Creating CGView maps. 254s Parsing XML input. 259s Drawing features.................. 259s Positioning and drawing 0 labels.......................... 259s 0 labels were removed. 259s Drawing tick marks. 259s Drawing legends. 259s The map has been drawn. 259s Writing picture to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.png 260s Writing HTML to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.html 260s [Saturday July 27 02:25:50 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastp/maps. 260s Processing project 'test_orfs' 260s Processing project 'test_orfs' using configuration 'project_settings.conf' 260s [Saturday July 27 02:25:50 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_orfs/project_settings.conf. 260s [Saturday July 27 02:25:50 2024] [Notice] Creating CGView XML files. 260s Creating XML for feature sets on the outside of the backbone circle. 260s Feature sets written first are drawn closest to the backbone circle. 260s Creating XML for ORFs that are in reading frame +1. 260s Creating XML for ORFs that are in reading frame +2. 260s Creating XML for ORFs that are in reading frame +3. 260s Creating XML for feature sets on the inside of the backbone circle. 260s Feature sets written first are drawn closest to the backbone circle. 260s Creating XML for ORFs that are in reading frame -1. 260s Creating XML for ORFs that are in reading frame -2. 260s Creating XML for ORFs that are in reading frame -3. 260s CGView XML file complete. 260s The recommended CGView command is: 260s ---------------------------------- 260s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_orfs/maps/cgview_xml/test_orfs_project_settings.conf_medium.xml -o map.png 260s Success! 260s The following key-values were used: 260s ----------------------------------- 260s arrowheadLength=6 260s average=T 260s atColorNeg=rgb(51,51,51) 260s atColorPos=rgb(51,51,51) 260s at_content=F 260s atSkewColorNeg=rgb(0,0,153) 260s atSkewColorPos=rgb(153,153,0) 260s at_skew=F 260s backboneColor=rgb(102,102,102) 260s backboneRadius=1000 260s backboneThickness=8 260s backgroundColor=white 260s blast_divider_ruler=F 260s blastRulerColor=rgb(255,165,0) 260s borderColor=black 260s combined_orfs=F 260s details=T 260s draw_divider_rings=T 260s featureOpacity=0.5 260s featureOpacityOther=0.5 260s featureSlotSpacing=6 260s featureThickness=30 260s featureThicknessPlot=570.00 260s feature_labels=F 260s gcColorNeg=rgb(0,0,0) 260s gcColorPos=rgb(0,0,0) 260s gc_content=F 260s gcSkewColorNeg=rgb(153,0,153) 260s gcSkewColorPos=rgb(0,153,0) 260s gc_skew=F 260s gene_decoration=arrow 260s gene_labels=F 260s global_label=true 260s height=3000 260s hit_labels=F 260s labelFontSize=15 260s labelPlacementQuality=good 260s labelLineLength=200 260s labelLineThickness=4 260s legend=T 260s legendFontSize=20 260s orf_labels=T 260s maxLabelLength=20 260s maxLegendLength=30 260s maxTitleLength=50 260s minimumFeatureLength=0.2 260s moveInnerLabelsToOuter=false 260s orfColor=rgb(204,0,0) 260s orfs=T 260s orf_size=19 260s otherColor=rgb(51,51,51) 260s parse_reading_frame=F 260s proteinColor=rgb(0,0,153) 260s reading_frames=F 260s rRNAColor=rgb(153,0,153) 260s rulerFontColor=rgb(0,0,0) 260s rulerFontSize=30 260s rulerPadding=40 260s scale=T 260s scale_blast=T 260s show_sequence_features=T 260s show_queries=F 260s startColor=rgb(153,0,153) 260s starts=atg 260s step=1 260s stopColor=rgb(204,0,0) 260s stops=taa|tag|tga 260s title= 260s titleFontSize=80 260s tickColor=rgb(0,51,0) 260s tickLength=15 260s tickThickness=6 260s tick_density=0.166666666666667 260s tRNAColor=rgb(153,0,0) 260s useInnerLabels=true 260s use_opacity=F 260s width=3000 260s window=50 260s ----------------------------------- 260s [Saturday July 27 02:25:50 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_orfs/maps/cgview_xml. 260s [Saturday July 27 02:25:50 2024] [Notice] Creating CGView maps. 261s Parsing XML input. 262s Drawing features.............. 262s Positioning and drawing 41 labels.......................... 262s 0 labels were removed. 262s Drawing tick marks. 262s Drawing legends. 262s The map has been drawn. 262s Writing picture to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.png 263s Writing HTML to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.html 263s [Saturday July 27 02:25:53 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_orfs/maps. 263s Processing project 'test_tblastn' 263s Processing project 'test_tblastn' using configuration 'project_settings.conf' 263s [Saturday July 27 02:25:53 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastn/project_settings.conf. 263s [Saturday July 27 02:25:53 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome for BLAST searches. 263s Extracting ORFs in reading frame 1 on strand 1. 263s Extracting ORFs in reading frame 2 on strand 1. 263s Extracting ORFs in reading frame 3 on strand 1. 263s Extracting ORFs in reading frame 1 on strand -1. 263s Extracting ORFs in reading frame 2 on strand -1. 263s Extracting ORFs in reading frame 3 on strand -1. 263s A total of 338 records were written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs. 263s [Saturday July 27 02:25:53 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs. 263s [Saturday July 27 02:25:53 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastn/comparison_genomes for BLAST searches. 263s [Saturday July 27 02:25:53 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split. 263s [Saturday July 27 02:25:53 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split. 264s [Saturday July 27 02:25:54 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastn/blast/blast_db. 264s [Saturday July 27 02:25:54 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_tblastn/blast/blast_db. 264s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Writing HSP to file. 264s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Writing HSP to file. 266s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Writing HSP to file. 266s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Writing HSP to file. 266s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Writing HSP to file. 267s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Writing HSP to file. 272s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Writing HSP to file. 273s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Writing HSP to file. 274s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Writing HSP to file. 277s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Writing HSP to file. 278s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 280s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Writing HSP to file. 281s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Writing HSP to file. 281s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Writing HSP to file. 282s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Writing HSP to file. 282s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 284s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Writing HSP to file. 288s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Writing HSP to file. 288s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Writing HSP to file. 291s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Writing HSP to file. 292s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Writing HSP to file. 293s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Writing HSP to file. 293s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 293s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 294s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Writing HSP to file. 294s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Writing HSP to file. 297s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Writing HSP to file. 298s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Writing HSP to file. 299s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Writing HSP to file. 299s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Writing HSP to file. 299s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Writing HSP to file. 304s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Writing HSP to file. 305s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Writing HSP to file. 306s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Writing HSP to file. 307s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn to view the BLAST results. 309s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Writing HSP to file. 309s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Writing HSP to file. 311s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Writing HSP to file. 311s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Writing HSP to file. 311s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Writing HSP to file. 311s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Writing HSP to file. 316s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Writing HSP to file. 318s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Writing HSP to file. 319s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Writing HSP to file. 322s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Writing HSP to file. 323s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Writing HSP to file. 325s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Writing HSP to file. 325s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Writing HSP to file. 327s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Writing HSP to file. 327s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Writing HSP to file. 332s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Writing HSP to file. 333s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Writing HSP to file. 336s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Writing HSP to file. 336s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Writing HSP to file. 337s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Writing HSP to file. 337s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Writing HSP to file. 338s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Writing HSP to file. 341s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Writing HSP to file. 342s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Writing HSP to file. 342s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Writing HSP to file. 343s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Writing HSP to file. 343s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Writing HSP to file. 348s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Writing HSP to file. 349s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Writing HSP to file. 350s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Writing HSP to file. 351s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results. 353s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Writing HSP to file. 353s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Writing HSP to file. 356s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Writing HSP to file. 360s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Writing HSP to file. 360s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Writing HSP to file. 361s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Writing HSP to file. 362s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Writing HSP to file. 365s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Writing HSP to file. 365s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Writing HSP to file. 368s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Writing HSP to file. 371s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Writing HSP to file. 373s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Writing HSP to file. 374s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Writing HSP to file. 378s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Writing HSP to file. 380s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Writing HSP to file. 382s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 383s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 383s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 384s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 384s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Writing HSP to file. 385s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Writing HSP to file. 385s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 385s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 385s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 386s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 386s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 387s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 387s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Writing HSP to file. 388s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 388s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 388s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 389s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 389s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Writing HSP to file. 390s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 390s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 390s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Writing HSP to file. 391s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 391s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 391s Writing HSP to file. 391s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Writing HSP to file. 392s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 392s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 392s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Writing HSP to file. 393s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 393s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 393s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 394s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 394s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 395s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 395s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 395s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Writing HSP to file. 396s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Writing HSP to file. 396s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 396s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 396s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn to view the BLAST results. 396s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Writing HSP to file. 397s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 397s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 397s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 398s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 398s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 399s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 399s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Writing HSP to file. 400s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 400s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 400s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 401s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 401s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 402s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 402s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 403s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 403s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Writing HSP to file. 404s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Writing HSP to file. 404s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 404s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 404s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Writing HSP to file. 405s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Writing HSP to file. 405s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 405s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 405s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 406s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 406s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 407s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 407s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Writing HSP to file. 408s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 408s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 408s Writing HSP to file. 408s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 409s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 409s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 410s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 410s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 411s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 411s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Writing HSP to file. 412s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 412s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 412s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 413s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 413s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 414s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 414s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Writing HSP to file. 415s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 415s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 415s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Writing HSP to file. 416s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 416s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 416s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Writing HSP to file. 417s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 417s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 417s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 418s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 418s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 419s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 419s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 420s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 420s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 421s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 421s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Writing HSP to file. 422s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 422s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 422s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 423s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 423s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Writing HSP to file. 424s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 424s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 424s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Writing HSP to file. 425s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 425s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 425s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 426s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 426s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 427s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 427s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 428s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 428s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Writing HSP to file. 429s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Writing HSP to file. 429s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 429s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 429s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 430s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 430s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Writing HSP to file. 431s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 431s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 431s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 432s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 432s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 433s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 433s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Writing HSP to file. 434s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 434s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 434s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 435s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Writing HSP to file. 435s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Writing HSP to file. 435s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 435s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 435s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Writing HSP to file. 436s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 436s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 436s Writing HSP to file. 436s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 437s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 437s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 438s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 438s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 439s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 439s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 440s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 440s Writing HSP to file. 440s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 440s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 440s Writing HSP to file. 440s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 440s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 440s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 440s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 440s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results. 440s [Saturday July 27 02:28:50 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local. 440s [Saturday July 27 02:28:50 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome. 440s [Saturday July 27 02:28:50 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastn/features. 440s [Saturday July 27 02:28:50 2024] [Notice] Creating CGView XML files. 440s [Saturday July 27 02:28:50 2024] [Notice] The following BLAST results will be drawn, from outside to center: 440s [Saturday July 27 02:28:50 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn 440s [Saturday July 27 02:28:50 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn 440s [Saturday July 27 02:28:50 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn 440s [Saturday July 27 02:28:50 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn 441s Creating XML for feature sets on the outside of the backbone circle. 441s Feature sets written first are drawn closest to the backbone circle. 441s Creating XML for ORFs that are in reading frame +1. 441s Creating XML for ORFs that are in reading frame +2. 441s Creating XML for ORFs that are in reading frame +3. 441s Creating XML for feature sets on the inside of the backbone circle. 441s Feature sets written first are drawn closest to the backbone circle. 441s Creating XML for ORFs that are in reading frame -1. 441s Creating XML for ORFs that are in reading frame -2. 441s Creating XML for ORFs that are in reading frame -3. 441s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn. 441s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn. 441s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn. 441s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn. 441s Creating XML for GC content information. 441s Plotting GC content using a window size of 500 and a step of 1. 441s The maximum GC content value is 0.5768. 441s The minimum GC content value is 0.4311. 441s The average GC content value is 0.5051. 441s GC content will be scaled based on the maximum and minimum values. 441s GC content will be plotted as the deviation from the average value. 441s Creating XML for GC skew information. 441s Plotting GC skew using a window size of 500 and a step of 1. 441s The maximum GC skew value is 0.1587. 441s The minimum GC skew value is -0.2263. 441s The average GC skew value is -0.0036. 441s GC skew will be scaled based on the maximum and minimum values. 441s GC skew will be plotted as the deviation from the average value. 441s CGView XML file complete. 441s The recommended CGView command is: 441s ---------------------------------- 441s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml/test_tblastn_project_settings.conf_medium.xml -o map.png 441s Success! 441s The following key-values were used: 441s ----------------------------------- 441s arrowheadLength=6 441s average=T 441s atColorNeg=rgb(51,51,51) 441s atColorPos=rgb(51,51,51) 441s at_content=F 441s atSkewColorNeg=rgb(0,0,153) 441s atSkewColorPos=rgb(153,153,0) 441s at_skew=F 441s backboneColor=rgb(102,102,102) 441s backboneRadius=1000 441s backboneThickness=8 441s backgroundColor=white 441s blast_divider_ruler=F 441s blastRulerColor=rgb(255,165,0) 441s borderColor=black 441s combined_orfs=F 441s details=T 441s draw_divider_rings=T 441s featureOpacity=0.5 441s featureOpacityOther=0.5 441s featureSlotSpacing=6 441s featureThickness=9.86 441s featureThicknessPlot=59.14 441s feature_labels=F 441s gcColorNeg=rgb(0,0,0) 441s gcColorPos=rgb(0,0,0) 441s gc_content=T 441s gcSkewColorNeg=rgb(153,0,153) 441s gcSkewColorPos=rgb(0,153,0) 441s gc_skew=T 441s gene_decoration=arrow 441s gene_labels=F 441s global_label=true 441s height=3000 441s hit_labels=F 441s labelFontSize=15 441s labelPlacementQuality=good 441s labelLineLength=200 441s labelLineThickness=4 441s legend=T 441s legendFontSize=20 441s orf_labels=F 441s maxLabelLength=20 441s maxLegendLength=30 441s maxTitleLength=50 441s minimumFeatureLength=0.2 441s moveInnerLabelsToOuter=false 441s orfColor=rgb(204,0,0) 441s orfs=T 441s orf_size=25 441s otherColor=rgb(51,51,51) 441s parse_reading_frame=T 441s proteinColor=rgb(0,0,153) 441s reading_frames=F 441s rRNAColor=rgb(153,0,153) 441s rulerFontColor=rgb(0,0,0) 441s rulerFontSize=30 441s rulerPadding=40 441s scale=T 441s scale_blast=T 441s show_sequence_features=T 441s show_queries=T 441s startColor=rgb(153,0,153) 441s starts=ttg|ctg|att|atc|ata|atg|gtg 441s step=1 441s stopColor=rgb(204,0,0) 441s stops=taa|tag|tga 441s title= 441s titleFontSize=80 441s tickColor=rgb(0,51,0) 441s tickLength=15 441s tickThickness=6 441s tick_density=0.166666666666667 441s tRNAColor=rgb(153,0,0) 441s useInnerLabels=true 441s use_opacity=F 441s width=3000 441s window=500 441s ----------------------------------- 441s [Saturday July 27 02:28:51 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml. 441s [Saturday July 27 02:28:51 2024] [Notice] Creating CGView maps. 441s Parsing XML input. 446s Drawing features.................................................................. 446s Positioning and drawing 0 labels.......................... 446s 0 labels were removed. 446s Drawing tick marks. 446s Drawing legends. 447s The map has been drawn. 447s Writing picture to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.png 447s Writing HTML to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.html 447s [Saturday July 27 02:28:57 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastn/maps. 447s Processing project 'test_plots' 447s Processing project 'test_plots' using configuration 'project_settings.conf' 447s [Saturday July 27 02:28:57 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_plots/project_settings.conf. 447s [Saturday July 27 02:28:57 2024] [Notice] Creating CGView XML files. 448s Creating XML for feature sets on the outside of the backbone circle. 448s Feature sets written first are drawn closest to the backbone circle. 448s Creating XML for ORFs that are in reading frame +1. 448s Creating XML for ORFs that are in reading frame +2. 448s Creating XML for ORFs that are in reading frame +3. 448s Creating XML for feature sets on the inside of the backbone circle. 448s Feature sets written first are drawn closest to the backbone circle. 448s Creating XML for ORFs that are in reading frame -1. 448s Creating XML for ORFs that are in reading frame -2. 448s Creating XML for ORFs that are in reading frame -3. 448s Creating XML for GC content information. 448s Plotting GC content using a window size of 50 and a step of 1. 448s The maximum GC content value is 1.0000. 448s The minimum GC content value is 0.0000. 448s The average GC content value is 0.6000. 448s GC content will be scaled based on the maximum and minimum values. 448s GC content will be plotted as the deviation from the average value. 448s Creating XML for GC skew information. 448s Plotting GC skew using a window size of 50 and a step of 1. 448s The maximum GC skew value is 1.0000. 448s The minimum GC skew value is -1.0000. 448s The average GC skew value is -0.3333. 448s GC skew will be scaled based on the maximum and minimum values. 448s GC skew will be plotted as the deviation from the average value. 448s CGView XML file complete. 448s The recommended CGView command is: 448s ---------------------------------- 448s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_plots/maps/cgview_xml/test_plots_project_settings.conf_medium.xml -o map.png 448s Success! 448s The following key-values were used: 448s ----------------------------------- 448s arrowheadLength=6 448s average=T 448s atColorNeg=rgb(51,51,51) 448s atColorPos=rgb(51,51,51) 448s at_content=F 448s atSkewColorNeg=rgb(0,0,153) 448s atSkewColorPos=rgb(153,153,0) 448s at_skew=F 448s backboneColor=rgb(102,102,102) 448s backboneRadius=1000 448s backboneThickness=8 448s backgroundColor=white 448s blast_divider_ruler=F 448s blastRulerColor=rgb(255,165,0) 448s borderColor=black 448s combined_orfs=F 448s details=T 448s draw_divider_rings=T 448s featureOpacity=0.5 448s featureOpacityOther=0.5 448s featureSlotSpacing=6 448s featureThickness=30 448s featureThicknessPlot=186.00 448s feature_labels=F 448s gcColorNeg=rgb(0,0,0) 448s gcColorPos=rgb(0,0,0) 448s gc_content=T 448s gcSkewColorNeg=rgb(153,0,153) 448s gcSkewColorPos=rgb(0,153,0) 448s gc_skew=T 448s gene_decoration=arrow 448s gene_labels=F 448s global_label=true 448s height=3000 448s hit_labels=F 448s labelFontSize=15 448s labelPlacementQuality=good 448s labelLineLength=200 448s labelLineThickness=4 448s legend=T 448s legendFontSize=20 448s orf_labels=F 448s maxLabelLength=20 448s maxLegendLength=30 448s maxTitleLength=50 448s minimumFeatureLength=0.2 448s moveInnerLabelsToOuter=false 448s orfColor=rgb(204,0,0) 448s orfs=T 448s orf_size=25 448s otherColor=rgb(51,51,51) 448s parse_reading_frame=F 448s proteinColor=rgb(0,0,153) 448s reading_frames=F 448s rRNAColor=rgb(153,0,153) 448s rulerFontColor=rgb(0,0,0) 448s rulerFontSize=30 448s rulerPadding=40 448s scale=T 448s scale_blast=T 448s show_sequence_features=T 448s show_queries=F 448s startColor=rgb(153,0,153) 448s starts=ttg|ctg|att|atc|ata|atg|gtg 448s step=1 448s stopColor=rgb(204,0,0) 448s stops=taa|tag|tga 448s title= 448s titleFontSize=80 448s tickColor=rgb(0,51,0) 448s tickLength=15 448s tickThickness=6 448s tick_density=0.166666666666667 448s tRNAColor=rgb(153,0,0) 448s useInnerLabels=true 448s use_opacity=F 448s width=3000 448s window=50 448s ----------------------------------- 448s [Saturday July 27 02:28:58 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_plots/maps/cgview_xml. 448s [Saturday July 27 02:28:58 2024] [Notice] Creating CGView maps. 448s Parsing XML input. 451s Drawing features.................. 451s Positioning and drawing 0 labels.......................... 451s 0 labels were removed. 451s Drawing tick marks. 451s Drawing legends. 451s The map has been drawn. 451s Writing picture to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.png 452s Writing HTML to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.html 452s [Saturday July 27 02:29:02 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_plots/maps. 452s Test project output written to '/var/tmp/cct/test_output' 452s autopkgtest [02:29:02]: test run-unit-test: -----------------------] 453s run-unit-test PASS 453s autopkgtest [02:29:03]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 453s autopkgtest [02:29:03]: @@@@@@@@@@@@@@@@@@@@ summary 453s run-unit-test PASS 464s nova [W] Using flock in scalingstack-bos02-ppc64el 464s Creating nova instance adt-oracular-ppc64el-cct-20240727-022130-juju-7f2275-prod-proposed-migration-environment-2-37aa1166-b02f-49d9-88df-ad46eeac9ad4 from image adt/ubuntu-oracular-ppc64el-server-20240726.img (UUID cec977d8-51a5-4200-9a8a-7a8973d79250)...