0s autopkgtest [01:28:14]: starting date and time: 2024-07-27 01:28:14+0000 0s autopkgtest [01:28:14]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [01:28:14]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.kejg_xv7/out --timeout-copy=6000 -a i386 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:ncbi-blast+ --apt-upgrade cct --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=ncbi-blast+/2.16.0+ds-3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-45.secgroup --name adt-oracular-i386-cct-20240727-012814-juju-7f2275-prod-proposed-migration-environment-2-fbc40e1f-dfc2-4bc1-88b7-4ff952457dc6 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 92s autopkgtest [01:29:46]: testbed dpkg architecture: amd64 93s autopkgtest [01:29:47]: testbed apt version: 2.9.6 93s autopkgtest [01:29:47]: test architecture: i386 93s autopkgtest [01:29:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 94s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 94s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 94s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [402 kB] 94s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [51.2 kB] 94s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4288 B] 94s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [92.1 kB] 94s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [49.4 kB] 94s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [2116 B] 94s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [34.9 kB] 94s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [6244 B] 94s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B] 94s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [165 kB] 94s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [368 kB] 94s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [9900 B] 94s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3052 B] 94s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [8792 B] 94s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [276 B] 95s Fetched 1332 kB in 0s (3686 kB/s) 95s Reading package lists... 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s Calculating upgrade... 99s The following packages will be upgraded: 99s binutils binutils-common binutils-x86-64-linux-gnu bpfcc-tools bpftrace 99s libbinutils libbpfcc libclang-cpp18 libclang1-18 libctf-nobfd0 libctf0 99s libgprofng0 libllvm18 liblz4-1 libsframe1 mawk python3-bpfcc 99s 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Need to get 66.8 MB of archives. 99s After this operation, 37.9 MB of additional disk space will be used. 99s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 liblz4-1 amd64 1.9.4-3 [63.1 kB] 99s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 mawk amd64 1.3.4.20240622-2 [127 kB] 99s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libgprofng0 amd64 2.42.90.20240720-2ubuntu1 [860 kB] 100s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libctf0 amd64 2.42.90.20240720-2ubuntu1 [95.7 kB] 100s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 libctf-nobfd0 amd64 2.42.90.20240720-2ubuntu1 [97.7 kB] 100s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 binutils-x86-64-linux-gnu amd64 2.42.90.20240720-2ubuntu1 [2479 kB] 101s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 libbinutils amd64 2.42.90.20240720-2ubuntu1 [575 kB] 101s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 binutils amd64 2.42.90.20240720-2ubuntu1 [18.2 kB] 101s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 binutils-common amd64 2.42.90.20240720-2ubuntu1 [243 kB] 101s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 libsframe1 amd64 2.42.90.20240720-2ubuntu1 [14.5 kB] 101s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 libclang-cpp18 amd64 1:18.1.8-4ubuntu1 [13.4 MB] 103s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libllvm18 amd64 1:18.1.8-4ubuntu1 [27.4 MB] 104s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libbpfcc amd64 0.30.0+ds-1ubuntu2 [644 kB] 104s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-bpfcc all 0.30.0+ds-1ubuntu2 [40.3 kB] 104s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 bpfcc-tools all 0.30.0+ds-1ubuntu2 [697 kB] 104s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libclang1-18 amd64 1:18.1.8-4ubuntu1 [7755 kB] 104s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 bpftrace amd64 0.21.2-1ubuntu1 [12.3 MB] 105s Fetched 66.8 MB in 5s (13.0 MB/s) 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 105s Preparing to unpack .../liblz4-1_1.9.4-3_amd64.deb ... 105s Unpacking liblz4-1:amd64 (1.9.4-3) over (1.9.4-2) ... 105s Setting up liblz4-1:amd64 (1.9.4-3) ... 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 105s Preparing to unpack .../00-mawk_1.3.4.20240622-2_amd64.deb ... 105s Unpacking mawk (1.3.4.20240622-2) over (1.3.4.20240622-1) ... 105s Preparing to unpack .../01-libgprofng0_2.42.90.20240720-2ubuntu1_amd64.deb ... 105s Unpacking libgprofng0:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 105s Preparing to unpack .../02-libctf0_2.42.90.20240720-2ubuntu1_amd64.deb ... 105s Unpacking libctf0:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 105s Preparing to unpack .../03-libctf-nobfd0_2.42.90.20240720-2ubuntu1_amd64.deb ... 105s Unpacking libctf-nobfd0:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 105s Preparing to unpack .../04-binutils-x86-64-linux-gnu_2.42.90.20240720-2ubuntu1_amd64.deb ... 105s Unpacking binutils-x86-64-linux-gnu (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 106s Preparing to unpack .../05-libbinutils_2.42.90.20240720-2ubuntu1_amd64.deb ... 106s Unpacking libbinutils:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 106s Preparing to unpack .../06-binutils_2.42.90.20240720-2ubuntu1_amd64.deb ... 106s Unpacking binutils (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 106s Preparing to unpack .../07-binutils-common_2.42.90.20240720-2ubuntu1_amd64.deb ... 106s Unpacking binutils-common:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 106s Preparing to unpack .../08-libsframe1_2.42.90.20240720-2ubuntu1_amd64.deb ... 106s Unpacking libsframe1:amd64 (2.42.90.20240720-2ubuntu1) over (2.42.50.20240710-1ubuntu1) ... 106s Preparing to unpack .../09-libclang-cpp18_1%3a18.1.8-4ubuntu1_amd64.deb ... 106s Unpacking libclang-cpp18 (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 106s Preparing to unpack .../10-libllvm18_1%3a18.1.8-4ubuntu1_amd64.deb ... 106s Unpacking libllvm18:amd64 (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 107s Preparing to unpack .../11-libbpfcc_0.30.0+ds-1ubuntu2_amd64.deb ... 107s Unpacking libbpfcc:amd64 (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 107s Preparing to unpack .../12-python3-bpfcc_0.30.0+ds-1ubuntu2_all.deb ... 107s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 107s Preparing to unpack .../13-bpfcc-tools_0.30.0+ds-1ubuntu2_all.deb ... 107s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 107s Preparing to unpack .../14-libclang1-18_1%3a18.1.8-4ubuntu1_amd64.deb ... 107s Unpacking libclang1-18 (1:18.1.8-4ubuntu1) over (1:18.1.8-1) ... 108s Preparing to unpack .../15-bpftrace_0.21.2-1ubuntu1_amd64.deb ... 108s Unpacking bpftrace (0.21.2-1ubuntu1) over (0.20.2-1ubuntu4) ... 108s Setting up binutils-common:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up libctf-nobfd0:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up libsframe1:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up mawk (1.3.4.20240622-2) ... 108s Setting up libbinutils:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up libllvm18:amd64 (1:18.1.8-4ubuntu1) ... 108s Setting up libctf0:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up libclang1-18 (1:18.1.8-4ubuntu1) ... 108s Setting up libgprofng0:amd64 (2.42.90.20240720-2ubuntu1) ... 108s Setting up libclang-cpp18 (1:18.1.8-4ubuntu1) ... 108s Setting up libbpfcc:amd64 (0.30.0+ds-1ubuntu2) ... 108s Setting up python3-bpfcc (0.30.0+ds-1ubuntu2) ... 108s Setting up binutils-x86-64-linux-gnu (2.42.90.20240720-2ubuntu1) ... 108s Setting up bpftrace (0.21.2-1ubuntu1) ... 108s Setting up binutils (2.42.90.20240720-2ubuntu1) ... 108s Setting up bpfcc-tools (0.30.0+ds-1ubuntu2) ... 108s Processing triggers for man-db (2.12.1-2) ... 109s Processing triggers for libc-bin (2.39-0ubuntu9) ... 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 111s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 111s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 111s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 112s Reading package lists... 112s Reading package lists... 113s Building dependency tree... 113s Reading state information... 113s Calculating upgrade... 113s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s Reading package lists... 113s Building dependency tree... 113s Reading state information... 114s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 116s autopkgtest [01:30:10]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 116s autopkgtest [01:30:10]: @@@@@@@@@@@@@@@@@@@@ apt-source cct 125s Get:1 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (dsc) [1997 B] 125s Get:2 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (tar) [81.7 MB] 125s Get:3 http://ftpmaster.internal/ubuntu oracular/universe cct 1:1.0.3-1 (diff) [11.7 kB] 125s gpgv: Signature made Sun Jan 16 15:11:18 2022 UTC 125s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 125s gpgv: issuer "tille@debian.org" 125s gpgv: Can't check signature: No public key 125s dpkg-source: warning: cannot verify inline signature for ./cct_1.0.3-1.dsc: no acceptable signature found 129s autopkgtest [01:30:23]: testing package cct version 1:1.0.3-1 130s autopkgtest [01:30:24]: build not needed 150s autopkgtest [01:30:44]: test run-unit-test: preparing testbed 156s Note, using file '/tmp/autopkgtest.EByNLJ/1-autopkgtest-satdep.dsc' to get the build dependencies 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 157s Starting pkgProblemResolver with broken count: 0 157s Starting 2 pkgProblemResolver with broken count: 0 157s Done 157s The following NEW packages will be installed: 157s adwaita-icon-theme at-spi2-common bioperl build-essential 157s ca-certificates-java cct cct-examples cgview cpp cpp-14 157s cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu dconf-gsettings-backend 157s dconf-service default-jre default-jre-headless fontconfig g++ g++-14 157s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 157s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gtk-update-icon-cache 157s hicolor-icon-theme humanity-icon-theme imagemagick imagemagick-6-common 157s imagemagick-6.q16 java-common java-wrappers libalgorithm-diff-perl 157s libapache-pom-java libasan8 libasound2-data libasound2t64 157s libatk-bridge2.0-0t64 libatk1.0-0t64 libatomic1 libatspi2.0-0t64 157s libavahi-client3 libavahi-common-data libavahi-common3 libbatik-java 157s libbio-perl-perl libcairo-gobject2 libcairo2 libcapture-tiny-perl libcc1-0 157s libclass-data-inheritable-perl libclone-perl libcolord2 libcommons-io-java 157s libcommons-lang-java libcommons-logging-java libcommons-parent-java 157s libcups2t64 libdata-stag-perl libdatrie1 libdconf1 libdevel-stacktrace-perl 157s libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 157s libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl 157s libfftw3-double3 libfile-listing-perl libgcc-14-dev libgdk-pixbuf-2.0-0 157s libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri libglapi-mesa 157s libglvnd0 libglx-mesa0 libglx0 libgtk-3-0t64 libgtk-3-common 157s libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl 157s libhttp-cookies-perl libhttp-date-perl libhttp-message-perl 157s libhttp-negotiate-perl libhwasan0 libio-html-perl libio-socket-ssl-perl 157s libio-string-perl libisl23 libitm1 libjargs-java libjaxp1.3-java liblcms2-2 157s libllvm17t64 liblqr-1-0 liblsan0 libltdl7 liblwp-mediatypes-perl 157s liblwp-protocol-https-perl libmagickcore-6.q16-7t64 libmagickwand-6.q16-7t64 157s libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmpc3 libnet-http-perl 157s libnet-ssleay-perl libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 157s libpangoft2-1.0-0 libpciaccess0 libpcsclite1 libpixman-1-0 libquadmath0 157s libraw23t64 libstdc++-14-dev libsub-uplevel-perl libtest-deep-perl 157s libtest-differences-perl libtest-exception-perl libtest-most-perl 157s libtest-warn-perl libtext-diff-perl libthai-data libthai0 libtie-ixhash-perl 157s libtimedate-perl libtry-tiny-perl libtsan2 libubsan1 liburi-perl libvulkan1 157s libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebpdemux2 157s libwebpmux3 libwww-perl libwww-robotrules-perl libx11-xcb1 libxcb-dri2-0 157s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 157s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 libxcursor1 157s libxdamage1 libxerces2-java libxfixes3 libxi6 libxinerama1 157s libxml-commons-external-java libxml-commons-resolver1.1-java 157s libxmlgraphics-commons-java libxrandr2 libxrender1 libxshmfence1 libxtst6 157s libxxf86vm1 ncbi-blast+ ncbi-blast+-legacy ncbi-data openjdk-21-jre 157s openjdk-21-jre-headless perl-openssl-defaults ubuntu-mono unzip x11-common 157s 0 upgraded, 182 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 276 MB of archives. 157s After this operation, 930 MB of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 libfftw3-double3 amd64 3.3.10-1ubuntu3 [838 kB] 157s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB] 157s Get:3 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblqr-1-0 amd64 0.4.2-2.1build2 [28.5 kB] 157s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 158s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 libopenjp2-7 amd64 2.5.0-2build3 [173 kB] 158s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libraw23t64 amd64 0.21.2-2.1build1 [378 kB] 158s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 158s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 158s Get:9 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick-6-common all 8:6.9.13.12+dfsg1-1 [69.5 kB] 158s Get:10 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmagickcore-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [1821 kB] 158s Get:11 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmagickwand-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [316 kB] 158s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [7888 B] 158s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [147 kB] 158s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 gtk-update-icon-cache amd64 3.24.43-1ubuntu1 [51.9 kB] 158s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 hicolor-icon-theme all 0.18-1 [13.5 kB] 158s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 humanity-icon-theme all 0.6.16 [1282 kB] 158s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 ubuntu-mono all 24.04-0ubuntu1 [151 kB] 158s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 adwaita-icon-theme all 46.0-1 [723 kB] 158s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 at-spi2-common all 2.52.0-1build1 [8674 B] 158s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-string-perl all 1.08-4 [11.1 kB] 158s Get:21 http://ftpmaster.internal/ubuntu oracular/universe amd64 libdata-stag-perl all 0.14-3 [372 kB] 158s Get:22 http://ftpmaster.internal/ubuntu oracular/universe amd64 libbio-perl-perl all 1.7.8-1 [2580 kB] 158s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libclass-data-inheritable-perl all 0.08-3 [8084 B] 158s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libdevel-stacktrace-perl all 2.0500-1 [22.1 kB] 158s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libexception-class-perl all 1.45-1 [28.6 kB] 158s Get:26 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-deep-perl all 1.204-1 [47.1 kB] 158s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 libcapture-tiny-perl all 0.48-2 [20.2 kB] 158s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 libalgorithm-diff-perl all 1.201-1 [41.8 kB] 158s Get:29 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtext-diff-perl all 1.45-2 [25.6 kB] 158s Get:30 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-differences-perl all 0.71-1 [15.8 kB] 158s Get:31 http://ftpmaster.internal/ubuntu oracular/universe amd64 libsub-uplevel-perl all 0.2800-3 [11.6 kB] 158s Get:32 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-exception-perl all 0.43-3 [13.4 kB] 158s Get:33 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-warn-perl all 0.37-2 [12.6 kB] 158s Get:34 http://ftpmaster.internal/ubuntu oracular/universe amd64 libtest-most-perl all 0.38-1 [21.5 kB] 158s Get:35 http://ftpmaster.internal/ubuntu oracular/universe amd64 bioperl all 1.7.8-1 [216 kB] 158s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 libisl23 amd64 0.26-3build1 [680 kB] 158s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 libmpc3 amd64 1.3.1-1build1 [54.5 kB] 158s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [11.9 MB] 159s Get:39 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14 amd64 14.1.0-5ubuntu1 [1030 B] 159s Get:40 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 159s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 159s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 libcc1-0 amd64 14.1.0-5ubuntu1 [47.6 kB] 159s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 libitm1 amd64 14.1.0-5ubuntu1 [29.1 kB] 159s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 libatomic1 amd64 14.1.0-5ubuntu1 [10.3 kB] 159s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 libasan8 amd64 14.1.0-5ubuntu1 [2997 kB] 159s Get:46 http://ftpmaster.internal/ubuntu oracular/main amd64 liblsan0 amd64 14.1.0-5ubuntu1 [1317 kB] 159s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 libtsan2 amd64 14.1.0-5ubuntu1 [2733 kB] 159s Get:48 http://ftpmaster.internal/ubuntu oracular/main amd64 libubsan1 amd64 14.1.0-5ubuntu1 [1178 kB] 159s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 libhwasan0 amd64 14.1.0-5ubuntu1 [1634 kB] 159s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 libquadmath0 amd64 14.1.0-5ubuntu1 [153 kB] 159s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcc-14-dev amd64 14.1.0-5ubuntu1 [2813 kB] 159s Get:52 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [23.4 MB] 160s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14 amd64 14.1.0-5ubuntu1 [516 kB] 160s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 160s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 160s Get:56 http://ftpmaster.internal/ubuntu oracular/main amd64 libstdc++-14-dev amd64 14.1.0-5ubuntu1 [2476 kB] 160s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [13.4 MB] 160s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14 amd64 14.1.0-5ubuntu1 [18.0 kB] 160s Get:59 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 160s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 160s Get:61 http://ftpmaster.internal/ubuntu oracular/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 160s Get:62 http://ftpmaster.internal/ubuntu oracular/main amd64 ca-certificates-java all 20240118 [11.6 kB] 160s Get:63 http://ftpmaster.internal/ubuntu oracular/main amd64 unzip amd64 6.0-28ubuntu5 [180 kB] 160s Get:64 http://ftpmaster.internal/ubuntu oracular/universe amd64 java-wrappers all 0.4 [8662 B] 160s Get:65 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjaxp1.3-java all 1.3.05-6 [227 kB] 160s Get:66 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] 160s Get:67 http://ftpmaster.internal/ubuntu oracular/universe amd64 libapache-pom-java all 29-2 [5284 B] 160s Get:68 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-parent-java all 56-1 [10.7 kB] 160s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-io-java all 2.16.1-1 [451 kB] 160s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 160s Get:71 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxmlgraphics-commons-java all 2.8-2 [619 kB] 160s Get:72 http://ftpmaster.internal/ubuntu oracular/universe amd64 libbatik-java all 1.17+dfsg-1 [3877 kB] 160s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 libcommons-lang-java all 2.6-10 [270 kB] 160s Get:74 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjargs-java all 1.0.0-5 [13.9 kB] 160s Get:75 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB] 160s Get:76 http://ftpmaster.internal/ubuntu oracular/universe amd64 libxerces2-java all 2.12.2-1 [1430 kB] 160s Get:77 http://ftpmaster.internal/ubuntu oracular/main amd64 java-common all 0.75+exp1 [6798 B] 160s Get:78 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcsclite1 amd64 2.2.3-1 [23.6 kB] 160s Get:79 http://ftpmaster.internal/ubuntu oracular/main amd64 openjdk-21-jre-headless amd64 21.0.4+7-1ubuntu2 [46.6 MB] 161s Get:80 http://ftpmaster.internal/ubuntu oracular/main amd64 default-jre-headless amd64 2:1.21-75+exp1 [3094 B] 161s Get:81 http://ftpmaster.internal/ubuntu oracular/main amd64 libatk1.0-0t64 amd64 2.52.0-1build1 [55.3 kB] 161s Get:82 http://ftpmaster.internal/ubuntu oracular/main amd64 libxi6 amd64 2:1.8.1-1build1 [32.4 kB] 161s Get:83 http://ftpmaster.internal/ubuntu oracular/main amd64 libatspi2.0-0t64 amd64 2.52.0-1build1 [80.5 kB] 161s Get:84 http://ftpmaster.internal/ubuntu oracular/main amd64 libatk-bridge2.0-0t64 amd64 2.52.0-1build1 [66.0 kB] 161s Get:85 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 161s Get:86 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 161s Get:87 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 161s Get:88 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 161s Get:89 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo2 amd64 1.18.0-3build1 [566 kB] 161s Get:90 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo-gobject2 amd64 1.18.0-3build1 [127 kB] 161s Get:91 http://ftpmaster.internal/ubuntu oracular/main amd64 libcolord2 amd64 1.4.7-1build2 [149 kB] 161s Get:92 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-common-data amd64 0.8-13ubuntu6 [29.7 kB] 161s Get:93 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-common3 amd64 0.8-13ubuntu6 [23.3 kB] 161s Get:94 http://ftpmaster.internal/ubuntu oracular/main amd64 libavahi-client3 amd64 0.8-13ubuntu6 [26.8 kB] 161s Get:95 http://ftpmaster.internal/ubuntu oracular/main amd64 libcups2t64 amd64 2.4.7-1.2ubuntu9 [267 kB] 161s Get:96 http://ftpmaster.internal/ubuntu oracular/main amd64 libepoxy0 amd64 1.5.10-1build1 [220 kB] 161s Get:97 http://ftpmaster.internal/ubuntu oracular/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 161s Get:98 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 161s Get:99 http://ftpmaster.internal/ubuntu oracular/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 161s Get:100 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 161s Get:101 http://ftpmaster.internal/ubuntu oracular/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [233 kB] 161s Get:102 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [42.3 kB] 161s Get:103 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [28.7 kB] 161s Get:104 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-client0 amd64 1.22.0-2.1build1 [26.4 kB] 161s Get:105 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-cursor0 amd64 1.22.0-2.1build1 [10.4 kB] 161s Get:106 http://ftpmaster.internal/ubuntu oracular/main amd64 libwayland-egl1 amd64 1.22.0-2.1build1 [5628 B] 161s Get:107 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcomposite1 amd64 1:0.4.5-1build3 [6320 B] 161s Get:108 http://ftpmaster.internal/ubuntu oracular/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB] 161s Get:109 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcursor1 amd64 1:1.2.2-1 [20.9 kB] 161s Get:110 http://ftpmaster.internal/ubuntu oracular/main amd64 libxdamage1 amd64 1:1.1.6-1build1 [6150 B] 161s Get:111 http://ftpmaster.internal/ubuntu oracular/main amd64 libxinerama1 amd64 2:1.1.4-3build1 [6396 B] 161s Get:112 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrandr2 amd64 2:1.5.4-1 [19.6 kB] 161s Get:113 http://ftpmaster.internal/ubuntu oracular/main amd64 libdconf1 amd64 0.40.0-4build2 [39.4 kB] 161s Get:114 http://ftpmaster.internal/ubuntu oracular/main amd64 dconf-service amd64 0.40.0-4build2 [27.5 kB] 161s Get:115 http://ftpmaster.internal/ubuntu oracular/main amd64 dconf-gsettings-backend amd64 0.40.0-4build2 [22.1 kB] 161s Get:116 http://ftpmaster.internal/ubuntu oracular/main amd64 libgtk-3-common all 3.24.43-1ubuntu1 [1201 kB] 161s Get:117 http://ftpmaster.internal/ubuntu oracular/main amd64 libgtk-3-0t64 amd64 3.24.43-1ubuntu1 [2899 kB] 161s Get:118 http://ftpmaster.internal/ubuntu oracular/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB] 161s Get:119 http://ftpmaster.internal/ubuntu oracular/main amd64 libglapi-mesa amd64 24.0.9-0ubuntu2 [40.7 kB] 161s Get:120 http://ftpmaster.internal/ubuntu oracular/main amd64 libx11-xcb1 amd64 2:1.8.7-1build1 [7800 B] 161s Get:121 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B] 161s Get:122 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B] 161s Get:123 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB] 161s Get:124 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B] 161s Get:125 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB] 161s Get:126 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B] 161s Get:127 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB] 161s Get:128 http://ftpmaster.internal/ubuntu oracular/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B] 161s Get:129 http://ftpmaster.internal/ubuntu oracular/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 161s Get:130 http://ftpmaster.internal/ubuntu oracular/main amd64 libvulkan1 amd64 1.3.283.0-1 [143 kB] 161s Get:131 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-amdgpu1 amd64 2.4.121-2 [20.7 kB] 161s Get:132 http://ftpmaster.internal/ubuntu oracular/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 161s Get:133 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-intel1 amd64 2.4.121-2 [63.8 kB] 161s Get:134 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-nouveau2 amd64 2.4.121-2 [17.6 kB] 161s Get:135 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-radeon1 amd64 2.4.121-2 [20.7 kB] 161s Get:136 http://ftpmaster.internal/ubuntu oracular/main amd64 libllvm17t64 amd64 1:17.0.6-12 [26.2 MB] 162s Get:137 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1-mesa-dri amd64 24.0.9-0ubuntu2 [8937 kB] 162s Get:138 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx-mesa0 amd64 24.0.9-0ubuntu2 [151 kB] 162s Get:139 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB] 162s Get:140 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB] 162s Get:141 http://ftpmaster.internal/ubuntu oracular/main amd64 libasound2-data all 1.2.12-1 [21.0 kB] 162s Get:142 http://ftpmaster.internal/ubuntu oracular/main amd64 libasound2t64 amd64 1.2.12-1 [394 kB] 162s Get:143 http://ftpmaster.internal/ubuntu oracular/main amd64 libgif7 amd64 5.2.2-1ubuntu1 [35.2 kB] 162s Get:144 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 162s Get:145 http://ftpmaster.internal/ubuntu oracular/main amd64 libxtst6 amd64 2:1.2.3-1.1build1 [12.6 kB] 162s Get:146 http://ftpmaster.internal/ubuntu oracular/main amd64 openjdk-21-jre amd64 21.0.4+7-1ubuntu2 [219 kB] 162s Get:147 http://ftpmaster.internal/ubuntu oracular/main amd64 default-jre amd64 2:1.21-75+exp1 [922 B] 162s Get:148 http://ftpmaster.internal/ubuntu oracular/universe amd64 cgview all 0.0.20100111-7 [2220 kB] 162s Get:149 http://ftpmaster.internal/ubuntu oracular/universe amd64 ncbi-data all 6.1.20170106+dfsg2-3 [3966 kB] 162s Get:150 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedcrypto7t64 amd64 2.28.8-1 [209 kB] 162s Get:151 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedx509-1t64 amd64 2.28.8-1 [46.6 kB] 162s Get:152 http://ftpmaster.internal/ubuntu oracular/universe amd64 libmbedtls14t64 amd64 2.28.8-1 [82.2 kB] 162s Get:153 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 ncbi-blast+ amd64 2.16.0+ds-3 [15.2 MB] 162s Get:154 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 ncbi-blast+-legacy all 2.16.0+ds-3 [4992 B] 162s Get:155 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick-6.q16 amd64 8:6.9.13.12+dfsg1-1 [254 kB] 162s Get:156 http://ftpmaster.internal/ubuntu oracular/universe amd64 imagemagick amd64 8:6.9.13.12+dfsg1-1 [14.2 kB] 162s Get:157 http://ftpmaster.internal/ubuntu oracular/main amd64 liberror-perl all 0.17029-2 [25.6 kB] 162s Get:158 http://ftpmaster.internal/ubuntu oracular/main amd64 libtie-ixhash-perl all 1.23-4 [11.3 kB] 162s Get:159 http://ftpmaster.internal/ubuntu oracular/main amd64 libencode-locale-perl all 1.05-3 [11.6 kB] 162s Get:160 http://ftpmaster.internal/ubuntu oracular/main amd64 libtimedate-perl all 2.3300-2 [34.0 kB] 162s Get:161 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-date-perl all 6.06-1 [10.2 kB] 162s Get:162 http://ftpmaster.internal/ubuntu oracular/main amd64 libfile-listing-perl all 6.16-1 [11.3 kB] 162s Get:163 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-tagset-perl all 3.24-1 [14.1 kB] 162s Get:164 http://ftpmaster.internal/ubuntu oracular/main amd64 liburi-perl all 5.28-1 [88.1 kB] 162s Get:165 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-parser-perl amd64 3.82-1 [85.6 kB] 162s Get:166 http://ftpmaster.internal/ubuntu oracular/main amd64 libhtml-tree-perl all 5.07-3 [200 kB] 162s Get:167 http://ftpmaster.internal/ubuntu oracular/main amd64 libclone-perl amd64 0.46-1build3 [10.7 kB] 162s Get:168 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-html-perl all 1.004-3 [15.9 kB] 162s Get:169 http://ftpmaster.internal/ubuntu oracular/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.1 kB] 162s Get:170 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-message-perl all 6.46-1ubuntu1 [75.9 kB] 162s Get:171 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-cookies-perl all 6.11-1 [18.2 kB] 162s Get:172 http://ftpmaster.internal/ubuntu oracular/main amd64 libhttp-negotiate-perl all 6.01-2 [12.4 kB] 162s Get:173 http://ftpmaster.internal/ubuntu oracular/main amd64 perl-openssl-defaults amd64 7build3 [6626 B] 162s Get:174 http://ftpmaster.internal/ubuntu oracular/main amd64 libnet-ssleay-perl amd64 1.94-1build4 [316 kB] 162s Get:175 http://ftpmaster.internal/ubuntu oracular/main amd64 libio-socket-ssl-perl all 2.088-1 [200 kB] 162s Get:176 http://ftpmaster.internal/ubuntu oracular/main amd64 libnet-http-perl all 6.23-1 [22.3 kB] 162s Get:177 http://ftpmaster.internal/ubuntu oracular/main amd64 liblwp-protocol-https-perl all 6.14-1 [9040 B] 162s Get:178 http://ftpmaster.internal/ubuntu oracular/main amd64 libtry-tiny-perl all 0.31-2 [20.8 kB] 162s Get:179 http://ftpmaster.internal/ubuntu oracular/main amd64 libwww-robotrules-perl all 6.02-1 [12.6 kB] 162s Get:180 http://ftpmaster.internal/ubuntu oracular/main amd64 libwww-perl all 6.77-1 [138 kB] 162s Get:181 http://ftpmaster.internal/ubuntu oracular/universe amd64 cct all 1:1.0.3-1 [36.3 MB] 162s Get:182 http://ftpmaster.internal/ubuntu oracular/universe amd64 cct-examples all 1:1.0.3-1 [43.6 MB] 164s Fetched 276 MB in 6s (48.7 MB/s) 164s Selecting previously unselected package libfftw3-double3:amd64. 164s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74531 files and directories currently installed.) 164s Preparing to unpack .../000-libfftw3-double3_3.3.10-1ubuntu3_amd64.deb ... 164s Unpacking libfftw3-double3:amd64 (3.3.10-1ubuntu3) ... 164s Selecting previously unselected package liblcms2-2:amd64. 164s Preparing to unpack .../001-liblcms2-2_2.14-2build1_amd64.deb ... 164s Unpacking liblcms2-2:amd64 (2.14-2build1) ... 164s Selecting previously unselected package liblqr-1-0:amd64. 164s Preparing to unpack .../002-liblqr-1-0_0.4.2-2.1build2_amd64.deb ... 164s Unpacking liblqr-1-0:amd64 (0.4.2-2.1build2) ... 164s Selecting previously unselected package libltdl7:amd64. 164s Preparing to unpack .../003-libltdl7_2.4.7-7build1_amd64.deb ... 164s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 164s Selecting previously unselected package libopenjp2-7:amd64. 164s Preparing to unpack .../004-libopenjp2-7_2.5.0-2build3_amd64.deb ... 164s Unpacking libopenjp2-7:amd64 (2.5.0-2build3) ... 164s Selecting previously unselected package libraw23t64:amd64. 164s Preparing to unpack .../005-libraw23t64_0.21.2-2.1build1_amd64.deb ... 164s Unpacking libraw23t64:amd64 (0.21.2-2.1build1) ... 164s Selecting previously unselected package libwebpdemux2:amd64. 164s Preparing to unpack .../006-libwebpdemux2_1.4.0-0.1_amd64.deb ... 164s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ... 164s Selecting previously unselected package libwebpmux3:amd64. 164s Preparing to unpack .../007-libwebpmux3_1.4.0-0.1_amd64.deb ... 164s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ... 164s Selecting previously unselected package imagemagick-6-common. 164s Preparing to unpack .../008-imagemagick-6-common_8%3a6.9.13.12+dfsg1-1_all.deb ... 164s Unpacking imagemagick-6-common (8:6.9.13.12+dfsg1-1) ... 164s Selecting previously unselected package libmagickcore-6.q16-7t64:amd64. 164s Preparing to unpack .../009-libmagickcore-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_amd64.deb ... 164s Unpacking libmagickcore-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... 164s Selecting previously unselected package libmagickwand-6.q16-7t64:amd64. 164s Preparing to unpack .../010-libmagickwand-6.q16-7t64_8%3a6.9.13.12+dfsg1-1_amd64.deb ... 164s Unpacking libmagickwand-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... 164s Selecting previously unselected package libgdk-pixbuf2.0-common. 164s Preparing to unpack .../011-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... 164s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 164s Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64. 164s Preparing to unpack .../012-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1_amd64.deb ... 164s Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... 164s Selecting previously unselected package gtk-update-icon-cache. 164s Preparing to unpack .../013-gtk-update-icon-cache_3.24.43-1ubuntu1_amd64.deb ... 164s Unpacking gtk-update-icon-cache (3.24.43-1ubuntu1) ... 164s Selecting previously unselected package hicolor-icon-theme. 164s Preparing to unpack .../014-hicolor-icon-theme_0.18-1_all.deb ... 164s Unpacking hicolor-icon-theme (0.18-1) ... 164s Selecting previously unselected package humanity-icon-theme. 164s Preparing to unpack .../015-humanity-icon-theme_0.6.16_all.deb ... 164s Unpacking humanity-icon-theme (0.6.16) ... 165s Selecting previously unselected package ubuntu-mono. 165s Preparing to unpack .../016-ubuntu-mono_24.04-0ubuntu1_all.deb ... 165s Unpacking ubuntu-mono (24.04-0ubuntu1) ... 166s Selecting previously unselected package adwaita-icon-theme. 166s Preparing to unpack .../017-adwaita-icon-theme_46.0-1_all.deb ... 166s Unpacking adwaita-icon-theme (46.0-1) ... 166s Selecting previously unselected package at-spi2-common. 166s Preparing to unpack .../018-at-spi2-common_2.52.0-1build1_all.deb ... 166s Unpacking at-spi2-common (2.52.0-1build1) ... 166s Selecting previously unselected package libio-string-perl. 166s Preparing to unpack .../019-libio-string-perl_1.08-4_all.deb ... 166s Unpacking libio-string-perl (1.08-4) ... 166s Selecting previously unselected package libdata-stag-perl. 166s Preparing to unpack .../020-libdata-stag-perl_0.14-3_all.deb ... 166s Unpacking libdata-stag-perl (0.14-3) ... 166s Selecting previously unselected package libbio-perl-perl. 166s Preparing to unpack .../021-libbio-perl-perl_1.7.8-1_all.deb ... 166s Unpacking libbio-perl-perl (1.7.8-1) ... 166s Selecting previously unselected package libclass-data-inheritable-perl. 166s Preparing to unpack .../022-libclass-data-inheritable-perl_0.08-3_all.deb ... 166s Unpacking libclass-data-inheritable-perl (0.08-3) ... 166s Selecting previously unselected package libdevel-stacktrace-perl. 166s Preparing to unpack .../023-libdevel-stacktrace-perl_2.0500-1_all.deb ... 166s Unpacking libdevel-stacktrace-perl (2.0500-1) ... 166s Selecting previously unselected package libexception-class-perl. 166s Preparing to unpack .../024-libexception-class-perl_1.45-1_all.deb ... 166s Unpacking libexception-class-perl (1.45-1) ... 166s Selecting previously unselected package libtest-deep-perl. 166s Preparing to unpack .../025-libtest-deep-perl_1.204-1_all.deb ... 166s Unpacking libtest-deep-perl (1.204-1) ... 166s Selecting previously unselected package libcapture-tiny-perl. 166s Preparing to unpack .../026-libcapture-tiny-perl_0.48-2_all.deb ... 166s Unpacking libcapture-tiny-perl (0.48-2) ... 166s Selecting previously unselected package libalgorithm-diff-perl. 167s Preparing to unpack .../027-libalgorithm-diff-perl_1.201-1_all.deb ... 167s Unpacking libalgorithm-diff-perl (1.201-1) ... 167s Selecting previously unselected package libtext-diff-perl. 167s Preparing to unpack .../028-libtext-diff-perl_1.45-2_all.deb ... 167s Unpacking libtext-diff-perl (1.45-2) ... 167s Selecting previously unselected package libtest-differences-perl. 167s Preparing to unpack .../029-libtest-differences-perl_0.71-1_all.deb ... 167s Unpacking libtest-differences-perl (0.71-1) ... 167s Selecting previously unselected package libsub-uplevel-perl. 167s Preparing to unpack .../030-libsub-uplevel-perl_0.2800-3_all.deb ... 167s Unpacking libsub-uplevel-perl (0.2800-3) ... 167s Selecting previously unselected package libtest-exception-perl. 167s Preparing to unpack .../031-libtest-exception-perl_0.43-3_all.deb ... 167s Unpacking libtest-exception-perl (0.43-3) ... 167s Selecting previously unselected package libtest-warn-perl. 167s Preparing to unpack .../032-libtest-warn-perl_0.37-2_all.deb ... 167s Unpacking libtest-warn-perl (0.37-2) ... 167s Selecting previously unselected package libtest-most-perl. 167s Preparing to unpack .../033-libtest-most-perl_0.38-1_all.deb ... 167s Unpacking libtest-most-perl (0.38-1) ... 167s Selecting previously unselected package bioperl. 167s Preparing to unpack .../034-bioperl_1.7.8-1_all.deb ... 167s Unpacking bioperl (1.7.8-1) ... 167s Selecting previously unselected package libisl23:amd64. 167s Preparing to unpack .../035-libisl23_0.26-3build1_amd64.deb ... 167s Unpacking libisl23:amd64 (0.26-3build1) ... 167s Selecting previously unselected package libmpc3:amd64. 167s Preparing to unpack .../036-libmpc3_1.3.1-1build1_amd64.deb ... 167s Unpacking libmpc3:amd64 (1.3.1-1build1) ... 167s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 167s Preparing to unpack .../037-cpp-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking cpp-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package cpp-14. 167s Preparing to unpack .../038-cpp-14_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking cpp-14 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package cpp-x86-64-linux-gnu. 167s Preparing to unpack .../039-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 167s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 167s Selecting previously unselected package cpp. 167s Preparing to unpack .../040-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 167s Unpacking cpp (4:14.1.0-2ubuntu1) ... 167s Selecting previously unselected package libcc1-0:amd64. 167s Preparing to unpack .../041-libcc1-0_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking libcc1-0:amd64 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package libitm1:amd64. 167s Preparing to unpack .../042-libitm1_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking libitm1:amd64 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package libatomic1:amd64. 167s Preparing to unpack .../043-libatomic1_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking libatomic1:amd64 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package libasan8:amd64. 167s Preparing to unpack .../044-libasan8_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking libasan8:amd64 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package liblsan0:amd64. 167s Preparing to unpack .../045-liblsan0_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking liblsan0:amd64 (14.1.0-5ubuntu1) ... 167s Selecting previously unselected package libtsan2:amd64. 167s Preparing to unpack .../046-libtsan2_14.1.0-5ubuntu1_amd64.deb ... 167s Unpacking libtsan2:amd64 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package libubsan1:amd64. 168s Preparing to unpack .../047-libubsan1_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking libubsan1:amd64 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package libhwasan0:amd64. 168s Preparing to unpack .../048-libhwasan0_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking libhwasan0:amd64 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package libquadmath0:amd64. 168s Preparing to unpack .../049-libquadmath0_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking libquadmath0:amd64 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package libgcc-14-dev:amd64. 168s Preparing to unpack .../050-libgcc-14-dev_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking libgcc-14-dev:amd64 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 168s Preparing to unpack .../051-gcc-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking gcc-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package gcc-14. 168s Preparing to unpack .../052-gcc-14_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking gcc-14 (14.1.0-5ubuntu1) ... 168s Selecting previously unselected package gcc-x86-64-linux-gnu. 168s Preparing to unpack .../053-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 168s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 168s Selecting previously unselected package gcc. 168s Preparing to unpack .../054-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 168s Unpacking gcc (4:14.1.0-2ubuntu1) ... 168s Selecting previously unselected package libstdc++-14-dev:amd64. 168s Preparing to unpack .../055-libstdc++-14-dev_14.1.0-5ubuntu1_amd64.deb ... 168s Unpacking libstdc++-14-dev:amd64 (14.1.0-5ubuntu1) ... 169s Selecting previously unselected package g++-14-x86-64-linux-gnu. 169s Preparing to unpack .../056-g++-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 169s Unpacking g++-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 169s Selecting previously unselected package g++-14. 169s Preparing to unpack .../057-g++-14_14.1.0-5ubuntu1_amd64.deb ... 169s Unpacking g++-14 (14.1.0-5ubuntu1) ... 169s Selecting previously unselected package g++-x86-64-linux-gnu. 169s Preparing to unpack .../058-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 169s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 169s Selecting previously unselected package g++. 169s Preparing to unpack .../059-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 169s Unpacking g++ (4:14.1.0-2ubuntu1) ... 169s Selecting previously unselected package build-essential. 169s Preparing to unpack .../060-build-essential_12.10ubuntu1_amd64.deb ... 169s Unpacking build-essential (12.10ubuntu1) ... 169s Selecting previously unselected package ca-certificates-java. 169s Preparing to unpack .../061-ca-certificates-java_20240118_all.deb ... 169s Unpacking ca-certificates-java (20240118) ... 169s Selecting previously unselected package unzip. 169s Preparing to unpack .../062-unzip_6.0-28ubuntu5_amd64.deb ... 169s Unpacking unzip (6.0-28ubuntu5) ... 169s Selecting previously unselected package java-wrappers. 169s Preparing to unpack .../063-java-wrappers_0.4_all.deb ... 169s Unpacking java-wrappers (0.4) ... 169s Selecting previously unselected package libjaxp1.3-java. 169s Preparing to unpack .../064-libjaxp1.3-java_1.3.05-6_all.deb ... 169s Unpacking libjaxp1.3-java (1.3.05-6) ... 169s Selecting previously unselected package libxml-commons-external-java. 169s Preparing to unpack .../065-libxml-commons-external-java_1.4.01-6_all.deb ... 169s Unpacking libxml-commons-external-java (1.4.01-6) ... 169s Selecting previously unselected package libapache-pom-java. 169s Preparing to unpack .../066-libapache-pom-java_29-2_all.deb ... 169s Unpacking libapache-pom-java (29-2) ... 169s Selecting previously unselected package libcommons-parent-java. 169s Preparing to unpack .../067-libcommons-parent-java_56-1_all.deb ... 169s Unpacking libcommons-parent-java (56-1) ... 169s Selecting previously unselected package libcommons-io-java. 169s Preparing to unpack .../068-libcommons-io-java_2.16.1-1_all.deb ... 169s Unpacking libcommons-io-java (2.16.1-1) ... 169s Selecting previously unselected package libcommons-logging-java. 169s Preparing to unpack .../069-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 169s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 169s Selecting previously unselected package libxmlgraphics-commons-java. 169s Preparing to unpack .../070-libxmlgraphics-commons-java_2.8-2_all.deb ... 169s Unpacking libxmlgraphics-commons-java (2.8-2) ... 170s Selecting previously unselected package libbatik-java. 170s Preparing to unpack .../071-libbatik-java_1.17+dfsg-1_all.deb ... 170s Unpacking libbatik-java (1.17+dfsg-1) ... 170s Selecting previously unselected package libcommons-lang-java. 170s Preparing to unpack .../072-libcommons-lang-java_2.6-10_all.deb ... 170s Unpacking libcommons-lang-java (2.6-10) ... 170s Selecting previously unselected package libjargs-java. 170s Preparing to unpack .../073-libjargs-java_1.0.0-5_all.deb ... 170s Unpacking libjargs-java (1.0.0-5) ... 170s Selecting previously unselected package libxml-commons-resolver1.1-java. 170s Preparing to unpack .../074-libxml-commons-resolver1.1-java_1.2-11_all.deb ... 170s Unpacking libxml-commons-resolver1.1-java (1.2-11) ... 170s Selecting previously unselected package libxerces2-java. 170s Preparing to unpack .../075-libxerces2-java_2.12.2-1_all.deb ... 170s Unpacking libxerces2-java (2.12.2-1) ... 170s Selecting previously unselected package java-common. 170s Preparing to unpack .../076-java-common_0.75+exp1_all.deb ... 170s Unpacking java-common (0.75+exp1) ... 170s Selecting previously unselected package libpcsclite1:amd64. 170s Preparing to unpack .../077-libpcsclite1_2.2.3-1_amd64.deb ... 170s Unpacking libpcsclite1:amd64 (2.2.3-1) ... 170s Selecting previously unselected package openjdk-21-jre-headless:amd64. 170s Preparing to unpack .../078-openjdk-21-jre-headless_21.0.4+7-1ubuntu2_amd64.deb ... 170s Unpacking openjdk-21-jre-headless:amd64 (21.0.4+7-1ubuntu2) ... 171s Selecting previously unselected package default-jre-headless. 171s Preparing to unpack .../079-default-jre-headless_2%3a1.21-75+exp1_amd64.deb ... 171s Unpacking default-jre-headless (2:1.21-75+exp1) ... 171s Selecting previously unselected package libatk1.0-0t64:amd64. 171s Preparing to unpack .../080-libatk1.0-0t64_2.52.0-1build1_amd64.deb ... 171s Unpacking libatk1.0-0t64:amd64 (2.52.0-1build1) ... 171s Selecting previously unselected package libxi6:amd64. 171s Preparing to unpack .../081-libxi6_2%3a1.8.1-1build1_amd64.deb ... 171s Unpacking libxi6:amd64 (2:1.8.1-1build1) ... 171s Selecting previously unselected package libatspi2.0-0t64:amd64. 171s Preparing to unpack .../082-libatspi2.0-0t64_2.52.0-1build1_amd64.deb ... 171s Unpacking libatspi2.0-0t64:amd64 (2.52.0-1build1) ... 171s Selecting previously unselected package libatk-bridge2.0-0t64:amd64. 171s Preparing to unpack .../083-libatk-bridge2.0-0t64_2.52.0-1build1_amd64.deb ... 171s Unpacking libatk-bridge2.0-0t64:amd64 (2.52.0-1build1) ... 171s Selecting previously unselected package libpixman-1-0:amd64. 171s Preparing to unpack .../084-libpixman-1-0_0.42.2-1build1_amd64.deb ... 171s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 171s Selecting previously unselected package libxcb-render0:amd64. 171s Preparing to unpack .../085-libxcb-render0_1.17.0-2_amd64.deb ... 171s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 171s Selecting previously unselected package libxcb-shm0:amd64. 171s Preparing to unpack .../086-libxcb-shm0_1.17.0-2_amd64.deb ... 171s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 171s Selecting previously unselected package libxrender1:amd64. 171s Preparing to unpack .../087-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 171s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 171s Selecting previously unselected package libcairo2:amd64. 171s Preparing to unpack .../088-libcairo2_1.18.0-3build1_amd64.deb ... 171s Unpacking libcairo2:amd64 (1.18.0-3build1) ... 171s Selecting previously unselected package libcairo-gobject2:amd64. 171s Preparing to unpack .../089-libcairo-gobject2_1.18.0-3build1_amd64.deb ... 171s Unpacking libcairo-gobject2:amd64 (1.18.0-3build1) ... 171s Selecting previously unselected package libcolord2:amd64. 172s Preparing to unpack .../090-libcolord2_1.4.7-1build2_amd64.deb ... 172s Unpacking libcolord2:amd64 (1.4.7-1build2) ... 172s Selecting previously unselected package libavahi-common-data:amd64. 172s Preparing to unpack .../091-libavahi-common-data_0.8-13ubuntu6_amd64.deb ... 172s Unpacking libavahi-common-data:amd64 (0.8-13ubuntu6) ... 172s Selecting previously unselected package libavahi-common3:amd64. 172s Preparing to unpack .../092-libavahi-common3_0.8-13ubuntu6_amd64.deb ... 172s Unpacking libavahi-common3:amd64 (0.8-13ubuntu6) ... 172s Selecting previously unselected package libavahi-client3:amd64. 172s Preparing to unpack .../093-libavahi-client3_0.8-13ubuntu6_amd64.deb ... 172s Unpacking libavahi-client3:amd64 (0.8-13ubuntu6) ... 172s Selecting previously unselected package libcups2t64:amd64. 172s Preparing to unpack .../094-libcups2t64_2.4.7-1.2ubuntu9_amd64.deb ... 172s Unpacking libcups2t64:amd64 (2.4.7-1.2ubuntu9) ... 172s Selecting previously unselected package libepoxy0:amd64. 172s Preparing to unpack .../095-libepoxy0_1.5.10-1build1_amd64.deb ... 172s Unpacking libepoxy0:amd64 (1.5.10-1build1) ... 172s Selecting previously unselected package fontconfig. 172s Preparing to unpack .../096-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 172s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 172s Selecting previously unselected package libthai-data. 172s Preparing to unpack .../097-libthai-data_0.1.29-2build1_all.deb ... 172s Unpacking libthai-data (0.1.29-2build1) ... 172s Selecting previously unselected package libdatrie1:amd64. 172s Preparing to unpack .../098-libdatrie1_0.2.13-3build1_amd64.deb ... 172s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 172s Selecting previously unselected package libthai0:amd64. 172s Preparing to unpack .../099-libthai0_0.1.29-2build1_amd64.deb ... 172s Unpacking libthai0:amd64 (0.1.29-2build1) ... 172s Selecting previously unselected package libpango-1.0-0:amd64. 172s Preparing to unpack .../100-libpango-1.0-0_1.54.0+ds-1_amd64.deb ... 172s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-1) ... 172s Selecting previously unselected package libpangoft2-1.0-0:amd64. 172s Preparing to unpack .../101-libpangoft2-1.0-0_1.54.0+ds-1_amd64.deb ... 172s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 172s Selecting previously unselected package libpangocairo-1.0-0:amd64. 172s Preparing to unpack .../102-libpangocairo-1.0-0_1.54.0+ds-1_amd64.deb ... 172s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 172s Selecting previously unselected package libwayland-client0:amd64. 172s Preparing to unpack .../103-libwayland-client0_1.22.0-2.1build1_amd64.deb ... 172s Unpacking libwayland-client0:amd64 (1.22.0-2.1build1) ... 172s Selecting previously unselected package libwayland-cursor0:amd64. 172s Preparing to unpack .../104-libwayland-cursor0_1.22.0-2.1build1_amd64.deb ... 172s Unpacking libwayland-cursor0:amd64 (1.22.0-2.1build1) ... 172s Selecting previously unselected package libwayland-egl1:amd64. 172s Preparing to unpack .../105-libwayland-egl1_1.22.0-2.1build1_amd64.deb ... 172s Unpacking libwayland-egl1:amd64 (1.22.0-2.1build1) ... 172s Selecting previously unselected package libxcomposite1:amd64. 172s Preparing to unpack .../106-libxcomposite1_1%3a0.4.5-1build3_amd64.deb ... 172s Unpacking libxcomposite1:amd64 (1:0.4.5-1build3) ... 172s Selecting previously unselected package libxfixes3:amd64. 172s Preparing to unpack .../107-libxfixes3_1%3a6.0.0-2build1_amd64.deb ... 172s Unpacking libxfixes3:amd64 (1:6.0.0-2build1) ... 172s Selecting previously unselected package libxcursor1:amd64. 172s Preparing to unpack .../108-libxcursor1_1%3a1.2.2-1_amd64.deb ... 172s Unpacking libxcursor1:amd64 (1:1.2.2-1) ... 172s Selecting previously unselected package libxdamage1:amd64. 172s Preparing to unpack .../109-libxdamage1_1%3a1.1.6-1build1_amd64.deb ... 172s Unpacking libxdamage1:amd64 (1:1.1.6-1build1) ... 172s Selecting previously unselected package libxinerama1:amd64. 172s Preparing to unpack .../110-libxinerama1_2%3a1.1.4-3build1_amd64.deb ... 172s Unpacking libxinerama1:amd64 (2:1.1.4-3build1) ... 172s Selecting previously unselected package libxrandr2:amd64. 172s Preparing to unpack .../111-libxrandr2_2%3a1.5.4-1_amd64.deb ... 172s Unpacking libxrandr2:amd64 (2:1.5.4-1) ... 172s Selecting previously unselected package libdconf1:amd64. 172s Preparing to unpack .../112-libdconf1_0.40.0-4build2_amd64.deb ... 172s Unpacking libdconf1:amd64 (0.40.0-4build2) ... 172s Selecting previously unselected package dconf-service. 172s Preparing to unpack .../113-dconf-service_0.40.0-4build2_amd64.deb ... 172s Unpacking dconf-service (0.40.0-4build2) ... 172s Selecting previously unselected package dconf-gsettings-backend:amd64. 172s Preparing to unpack .../114-dconf-gsettings-backend_0.40.0-4build2_amd64.deb ... 172s Unpacking dconf-gsettings-backend:amd64 (0.40.0-4build2) ... 172s Selecting previously unselected package libgtk-3-common. 172s Preparing to unpack .../115-libgtk-3-common_3.24.43-1ubuntu1_all.deb ... 172s Unpacking libgtk-3-common (3.24.43-1ubuntu1) ... 172s Selecting previously unselected package libgtk-3-0t64:amd64. 172s Preparing to unpack .../116-libgtk-3-0t64_3.24.43-1ubuntu1_amd64.deb ... 172s Unpacking libgtk-3-0t64:amd64 (3.24.43-1ubuntu1) ... 172s Selecting previously unselected package libglvnd0:amd64. 172s Preparing to unpack .../117-libglvnd0_1.7.0-1build1_amd64.deb ... 172s Unpacking libglvnd0:amd64 (1.7.0-1build1) ... 173s Selecting previously unselected package libglapi-mesa:amd64. 173s Preparing to unpack .../118-libglapi-mesa_24.0.9-0ubuntu2_amd64.deb ... 173s Unpacking libglapi-mesa:amd64 (24.0.9-0ubuntu2) ... 173s Selecting previously unselected package libx11-xcb1:amd64. 173s Preparing to unpack .../119-libx11-xcb1_2%3a1.8.7-1build1_amd64.deb ... 173s Unpacking libx11-xcb1:amd64 (2:1.8.7-1build1) ... 173s Selecting previously unselected package libxcb-dri2-0:amd64. 173s Preparing to unpack .../120-libxcb-dri2-0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-dri3-0:amd64. 173s Preparing to unpack .../121-libxcb-dri3-0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-glx0:amd64. 173s Preparing to unpack .../122-libxcb-glx0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-glx0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-present0:amd64. 173s Preparing to unpack .../123-libxcb-present0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-present0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-randr0:amd64. 173s Preparing to unpack .../124-libxcb-randr0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-randr0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-sync1:amd64. 173s Preparing to unpack .../125-libxcb-sync1_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-sync1:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxcb-xfixes0:amd64. 173s Preparing to unpack .../126-libxcb-xfixes0_1.17.0-2_amd64.deb ... 173s Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ... 173s Selecting previously unselected package libxshmfence1:amd64. 173s Preparing to unpack .../127-libxshmfence1_1.3-1build5_amd64.deb ... 173s Unpacking libxshmfence1:amd64 (1.3-1build5) ... 173s Selecting previously unselected package libxxf86vm1:amd64. 173s Preparing to unpack .../128-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 173s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 173s Selecting previously unselected package libvulkan1:amd64. 173s Preparing to unpack .../129-libvulkan1_1.3.283.0-1_amd64.deb ... 173s Unpacking libvulkan1:amd64 (1.3.283.0-1) ... 173s Selecting previously unselected package libdrm-amdgpu1:amd64. 173s Preparing to unpack .../130-libdrm-amdgpu1_2.4.121-2_amd64.deb ... 173s Unpacking libdrm-amdgpu1:amd64 (2.4.121-2) ... 173s Selecting previously unselected package libpciaccess0:amd64. 173s Preparing to unpack .../131-libpciaccess0_0.17-3build1_amd64.deb ... 173s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 173s Selecting previously unselected package libdrm-intel1:amd64. 173s Preparing to unpack .../132-libdrm-intel1_2.4.121-2_amd64.deb ... 173s Unpacking libdrm-intel1:amd64 (2.4.121-2) ... 173s Selecting previously unselected package libdrm-nouveau2:amd64. 173s Preparing to unpack .../133-libdrm-nouveau2_2.4.121-2_amd64.deb ... 173s Unpacking libdrm-nouveau2:amd64 (2.4.121-2) ... 173s Selecting previously unselected package libdrm-radeon1:amd64. 173s Preparing to unpack .../134-libdrm-radeon1_2.4.121-2_amd64.deb ... 173s Unpacking libdrm-radeon1:amd64 (2.4.121-2) ... 173s Selecting previously unselected package libllvm17t64:amd64. 173s Preparing to unpack .../135-libllvm17t64_1%3a17.0.6-12_amd64.deb ... 173s Unpacking libllvm17t64:amd64 (1:17.0.6-12) ... 174s Selecting previously unselected package libgl1-mesa-dri:amd64. 174s Preparing to unpack .../136-libgl1-mesa-dri_24.0.9-0ubuntu2_amd64.deb ... 174s Unpacking libgl1-mesa-dri:amd64 (24.0.9-0ubuntu2) ... 174s Selecting previously unselected package libglx-mesa0:amd64. 174s Preparing to unpack .../137-libglx-mesa0_24.0.9-0ubuntu2_amd64.deb ... 174s Unpacking libglx-mesa0:amd64 (24.0.9-0ubuntu2) ... 174s Selecting previously unselected package libglx0:amd64. 174s Preparing to unpack .../138-libglx0_1.7.0-1build1_amd64.deb ... 174s Unpacking libglx0:amd64 (1.7.0-1build1) ... 174s Selecting previously unselected package libgl1:amd64. 174s Preparing to unpack .../139-libgl1_1.7.0-1build1_amd64.deb ... 174s Unpacking libgl1:amd64 (1.7.0-1build1) ... 174s Selecting previously unselected package libasound2-data. 174s Preparing to unpack .../140-libasound2-data_1.2.12-1_all.deb ... 174s Unpacking libasound2-data (1.2.12-1) ... 174s Selecting previously unselected package libasound2t64:amd64. 174s Preparing to unpack .../141-libasound2t64_1.2.12-1_amd64.deb ... 174s Unpacking libasound2t64:amd64 (1.2.12-1) ... 174s Selecting previously unselected package libgif7:amd64. 174s Preparing to unpack .../142-libgif7_5.2.2-1ubuntu1_amd64.deb ... 174s Unpacking libgif7:amd64 (5.2.2-1ubuntu1) ... 174s Selecting previously unselected package x11-common. 174s Preparing to unpack .../143-x11-common_1%3a7.7+23ubuntu3_all.deb ... 174s Unpacking x11-common (1:7.7+23ubuntu3) ... 174s Selecting previously unselected package libxtst6:amd64. 174s Preparing to unpack .../144-libxtst6_2%3a1.2.3-1.1build1_amd64.deb ... 174s Unpacking libxtst6:amd64 (2:1.2.3-1.1build1) ... 174s Selecting previously unselected package openjdk-21-jre:amd64. 174s Preparing to unpack .../145-openjdk-21-jre_21.0.4+7-1ubuntu2_amd64.deb ... 174s Unpacking openjdk-21-jre:amd64 (21.0.4+7-1ubuntu2) ... 174s Selecting previously unselected package default-jre. 174s Preparing to unpack .../146-default-jre_2%3a1.21-75+exp1_amd64.deb ... 174s Unpacking default-jre (2:1.21-75+exp1) ... 174s Selecting previously unselected package cgview. 174s Preparing to unpack .../147-cgview_0.0.20100111-7_all.deb ... 174s Unpacking cgview (0.0.20100111-7) ... 174s Selecting previously unselected package ncbi-data. 174s Preparing to unpack .../148-ncbi-data_6.1.20170106+dfsg2-3_all.deb ... 174s Unpacking ncbi-data (6.1.20170106+dfsg2-3) ... 175s Selecting previously unselected package libmbedcrypto7t64:amd64. 175s Preparing to unpack .../149-libmbedcrypto7t64_2.28.8-1_amd64.deb ... 175s Unpacking libmbedcrypto7t64:amd64 (2.28.8-1) ... 175s Selecting previously unselected package libmbedx509-1t64:amd64. 175s Preparing to unpack .../150-libmbedx509-1t64_2.28.8-1_amd64.deb ... 175s Unpacking libmbedx509-1t64:amd64 (2.28.8-1) ... 175s Selecting previously unselected package libmbedtls14t64:amd64. 175s Preparing to unpack .../151-libmbedtls14t64_2.28.8-1_amd64.deb ... 175s Unpacking libmbedtls14t64:amd64 (2.28.8-1) ... 175s Selecting previously unselected package ncbi-blast+. 175s Preparing to unpack .../152-ncbi-blast+_2.16.0+ds-3_amd64.deb ... 175s Unpacking ncbi-blast+ (2.16.0+ds-3) ... 175s Selecting previously unselected package ncbi-blast+-legacy. 175s Preparing to unpack .../153-ncbi-blast+-legacy_2.16.0+ds-3_all.deb ... 175s Unpacking ncbi-blast+-legacy (2.16.0+ds-3) ... 175s Selecting previously unselected package imagemagick-6.q16. 175s Preparing to unpack .../154-imagemagick-6.q16_8%3a6.9.13.12+dfsg1-1_amd64.deb ... 175s Unpacking imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... 175s Selecting previously unselected package imagemagick. 175s Preparing to unpack .../155-imagemagick_8%3a6.9.13.12+dfsg1-1_amd64.deb ... 175s Unpacking imagemagick (8:6.9.13.12+dfsg1-1) ... 175s Selecting previously unselected package liberror-perl. 175s Preparing to unpack .../156-liberror-perl_0.17029-2_all.deb ... 175s Unpacking liberror-perl (0.17029-2) ... 175s Selecting previously unselected package libtie-ixhash-perl. 175s Preparing to unpack .../157-libtie-ixhash-perl_1.23-4_all.deb ... 175s Unpacking libtie-ixhash-perl (1.23-4) ... 175s Selecting previously unselected package libencode-locale-perl. 175s Preparing to unpack .../158-libencode-locale-perl_1.05-3_all.deb ... 175s Unpacking libencode-locale-perl (1.05-3) ... 175s Selecting previously unselected package libtimedate-perl. 175s Preparing to unpack .../159-libtimedate-perl_2.3300-2_all.deb ... 175s Unpacking libtimedate-perl (2.3300-2) ... 175s Selecting previously unselected package libhttp-date-perl. 175s Preparing to unpack .../160-libhttp-date-perl_6.06-1_all.deb ... 175s Unpacking libhttp-date-perl (6.06-1) ... 175s Selecting previously unselected package libfile-listing-perl. 175s Preparing to unpack .../161-libfile-listing-perl_6.16-1_all.deb ... 175s Unpacking libfile-listing-perl (6.16-1) ... 175s Selecting previously unselected package libhtml-tagset-perl. 175s Preparing to unpack .../162-libhtml-tagset-perl_3.24-1_all.deb ... 175s Unpacking libhtml-tagset-perl (3.24-1) ... 175s Selecting previously unselected package liburi-perl. 175s Preparing to unpack .../163-liburi-perl_5.28-1_all.deb ... 175s Unpacking liburi-perl (5.28-1) ... 175s Selecting previously unselected package libhtml-parser-perl:amd64. 175s Preparing to unpack .../164-libhtml-parser-perl_3.82-1_amd64.deb ... 175s Unpacking libhtml-parser-perl:amd64 (3.82-1) ... 176s Selecting previously unselected package libhtml-tree-perl. 176s Preparing to unpack .../165-libhtml-tree-perl_5.07-3_all.deb ... 176s Unpacking libhtml-tree-perl (5.07-3) ... 176s Selecting previously unselected package libclone-perl:amd64. 176s Preparing to unpack .../166-libclone-perl_0.46-1build3_amd64.deb ... 176s Unpacking libclone-perl:amd64 (0.46-1build3) ... 176s Selecting previously unselected package libio-html-perl. 176s Preparing to unpack .../167-libio-html-perl_1.004-3_all.deb ... 176s Unpacking libio-html-perl (1.004-3) ... 176s Selecting previously unselected package liblwp-mediatypes-perl. 176s Preparing to unpack .../168-liblwp-mediatypes-perl_6.04-2_all.deb ... 176s Unpacking liblwp-mediatypes-perl (6.04-2) ... 176s Selecting previously unselected package libhttp-message-perl. 176s Preparing to unpack .../169-libhttp-message-perl_6.46-1ubuntu1_all.deb ... 176s Unpacking libhttp-message-perl (6.46-1ubuntu1) ... 176s Selecting previously unselected package libhttp-cookies-perl. 176s Preparing to unpack .../170-libhttp-cookies-perl_6.11-1_all.deb ... 176s Unpacking libhttp-cookies-perl (6.11-1) ... 176s Selecting previously unselected package libhttp-negotiate-perl. 176s Preparing to unpack .../171-libhttp-negotiate-perl_6.01-2_all.deb ... 176s Unpacking libhttp-negotiate-perl (6.01-2) ... 176s Selecting previously unselected package perl-openssl-defaults:amd64. 176s Preparing to unpack .../172-perl-openssl-defaults_7build3_amd64.deb ... 176s Unpacking perl-openssl-defaults:amd64 (7build3) ... 176s Selecting previously unselected package libnet-ssleay-perl:amd64. 176s Preparing to unpack .../173-libnet-ssleay-perl_1.94-1build4_amd64.deb ... 176s Unpacking libnet-ssleay-perl:amd64 (1.94-1build4) ... 176s Selecting previously unselected package libio-socket-ssl-perl. 176s Preparing to unpack .../174-libio-socket-ssl-perl_2.088-1_all.deb ... 176s Unpacking libio-socket-ssl-perl (2.088-1) ... 176s Selecting previously unselected package libnet-http-perl. 176s Preparing to unpack .../175-libnet-http-perl_6.23-1_all.deb ... 176s Unpacking libnet-http-perl (6.23-1) ... 176s Selecting previously unselected package liblwp-protocol-https-perl. 176s Preparing to unpack .../176-liblwp-protocol-https-perl_6.14-1_all.deb ... 176s Unpacking liblwp-protocol-https-perl (6.14-1) ... 176s Selecting previously unselected package libtry-tiny-perl. 176s Preparing to unpack .../177-libtry-tiny-perl_0.31-2_all.deb ... 176s Unpacking libtry-tiny-perl (0.31-2) ... 176s Selecting previously unselected package libwww-robotrules-perl. 176s Preparing to unpack .../178-libwww-robotrules-perl_6.02-1_all.deb ... 176s Unpacking libwww-robotrules-perl (6.02-1) ... 176s Selecting previously unselected package libwww-perl. 176s Preparing to unpack .../179-libwww-perl_6.77-1_all.deb ... 176s Unpacking libwww-perl (6.77-1) ... 176s Selecting previously unselected package cct. 176s Preparing to unpack .../180-cct_1%3a1.0.3-1_all.deb ... 176s Unpacking cct (1:1.0.3-1) ... 176s Selecting previously unselected package cct-examples. 176s Preparing to unpack .../181-cct-examples_1%3a1.0.3-1_all.deb ... 176s Unpacking cct-examples (1:1.0.3-1) ... 177s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... 177s Setting up liblcms2-2:amd64 (2.14-2build1) ... 177s Setting up ncbi-data (6.1.20170106+dfsg2-3) ... 177s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ... 177s Setting up libx11-xcb1:amd64 (2:1.8.7-1build1) ... 177s Setting up libpciaccess0:amd64 (0.17-3build1) ... 177s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 179s Regenerating fonts cache... done. 179s Setting up imagemagick-6-common (8:6.9.13.12+dfsg1-1) ... 179s Setting up libdrm-nouveau2:amd64 (2.4.121-2) ... 179s Setting up libtie-ixhash-perl (1.23-4) ... 179s Setting up libxdamage1:amd64 (1:1.1.6-1build1) ... 179s Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... 179s Setting up hicolor-icon-theme (0.18-1) ... 179s Setting up libxi6:amd64 (2:1.8.1-1build1) ... 179s Setting up libmbedcrypto7t64:amd64 (2.28.8-1) ... 179s Setting up java-common (0.75+exp1) ... 179s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 179s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 179s Setting up libtest-deep-perl (1.204-1) ... 179s Setting up libxcb-render0:amd64 (1.17.0-2) ... 179s Setting up libclone-perl:amd64 (0.46-1build3) ... 179s Setting up libalgorithm-diff-perl (1.201-1) ... 179s Setting up libdrm-radeon1:amd64 (2.4.121-2) ... 179s Setting up libglvnd0:amd64 (1.7.0-1build1) ... 179s Setting up libhtml-tagset-perl (3.24-1) ... 179s Setting up libxcb-glx0:amd64 (1.17.0-2) ... 179s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... 179s Setting up unzip (6.0-28ubuntu5) ... 179s Setting up libdrm-intel1:amd64 (2.4.121-2) ... 179s Setting up liblwp-mediatypes-perl (6.04-2) ... 179s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... 179s Setting up x11-common (1:7.7+23ubuntu3) ... 180s Setting up libtry-tiny-perl (0.31-2) ... 180s Setting up perl-openssl-defaults:amd64 (7build3) ... 180s Setting up libencode-locale-perl (1.05-3) ... 180s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 180s Setting up libcairo2:amd64 (1.18.0-3build1) ... 180s Setting up libcolord2:amd64 (1.4.7-1build2) ... 180s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ... 180s Setting up libxcb-present0:amd64 (1.17.0-2) ... 180s Setting up liberror-perl (0.17029-2) ... 180s Setting up libdconf1:amd64 (0.40.0-4build2) ... 180s Setting up libasound2-data (1.2.12-1) ... 180s Setting up libio-string-perl (1.08-4) ... 180s Setting up libclass-data-inheritable-perl (0.08-3) ... 180s Setting up libasound2t64:amd64 (1.2.12-1) ... 180s Setting up libllvm17t64:amd64 (1:17.0.6-12) ... 180s Setting up libepoxy0:amd64 (1.5.10-1build1) ... 180s Setting up libtext-diff-perl (1.45-2) ... 180s Setting up libxfixes3:amd64 (1:6.0.0-2build1) ... 180s Setting up libxcb-sync1:amd64 (1.17.0-2) ... 180s Setting up libapache-pom-java (29-2) ... 180s Setting up libavahi-common-data:amd64 (0.8-13ubuntu6) ... 180s Setting up libatspi2.0-0t64:amd64 (2.52.0-1build1) ... 180s Setting up libquadmath0:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libxinerama1:amd64 (2:1.1.4-3build1) ... 180s Setting up libxml-commons-resolver1.1-java (1.2-11) ... 180s Setting up libmpc3:amd64 (1.3.1-1build1) ... 180s Setting up libatomic1:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libio-html-perl (1.004-3) ... 180s Setting up libxrandr2:amd64 (2:1.5.4-1) ... 180s Setting up libpcsclite1:amd64 (2.2.3-1) ... 180s Setting up libltdl7:amd64 (2.4.7-7build1) ... 180s Setting up libfftw3-double3:amd64 (3.3.10-1ubuntu3) ... 180s Setting up libglapi-mesa:amd64 (24.0.9-0ubuntu2) ... 180s Setting up libraw23t64:amd64 (0.21.2-2.1build1) ... 180s Setting up libvulkan1:amd64 (1.3.283.0-1) ... 180s Setting up libcapture-tiny-perl (0.48-2) ... 180s Setting up libtimedate-perl (2.3300-2) ... 180s Setting up libubsan1:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... 180s Setting up libgif7:amd64 (5.2.2-1ubuntu1) ... 180s Setting up libdata-stag-perl (0.14-3) ... 180s Setting up liblqr-1-0:amd64 (0.4.2-2.1build2) ... 180s Setting up libxshmfence1:amd64 (1.3-1build5) ... 180s Setting up libhwasan0:amd64 (14.1.0-5ubuntu1) ... 180s Setting up at-spi2-common (2.52.0-1build1) ... 180s Setting up libxcb-randr0:amd64 (1.17.0-2) ... 180s Setting up libasan8:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libxml-commons-external-java (1.4.01-6) ... 180s Setting up libjargs-java (1.0.0-5) ... 180s Setting up libsub-uplevel-perl (0.2800-3) ... 180s Setting up libopenjp2-7:amd64 (2.5.0-2build3) ... 180s Setting up libthai-data (0.1.29-2build1) ... 180s Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... 180s Setting up libdevel-stacktrace-perl (2.0500-1) ... 180s Setting up libcairo-gobject2:amd64 (1.18.0-3build1) ... 180s Setting up libwayland-egl1:amd64 (1.22.0-2.1build1) ... 180s Setting up libbio-perl-perl (1.7.8-1) ... 180s Setting up libtsan2:amd64 (14.1.0-5ubuntu1) ... 180s Setting up ca-certificates-java (20240118) ... 180s No JRE found. Skipping Java certificates setup. 180s Setting up libxerces2-java (2.12.2-1) ... 180s Setting up libjaxp1.3-java (1.3.05-6) ... 180s Setting up libisl23:amd64 (0.26-3build1) ... 180s Setting up libwebpmux3:amd64 (1.4.0-0.1) ... 180s Setting up libxcomposite1:amd64 (1:0.4.5-1build3) ... 180s Setting up libcc1-0:amd64 (14.1.0-5ubuntu1) ... 180s Setting up liburi-perl (5.28-1) ... 180s Setting up liblsan0:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libitm1:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libdrm-amdgpu1:amd64 (2.4.121-2) ... 180s Setting up libwayland-client0:amd64 (1.22.0-2.1build1) ... 180s Setting up libnet-ssleay-perl:amd64 (1.94-1build4) ... 180s Setting up gtk-update-icon-cache (3.24.43-1ubuntu1) ... 180s Setting up libhttp-date-perl (6.06-1) ... 180s Setting up libmbedx509-1t64:amd64 (2.28.8-1) ... 180s Setting up java-wrappers (0.4) ... 180s Setting up libatk1.0-0t64:amd64 (2.52.0-1build1) ... 180s Setting up libfile-listing-perl (6.16-1) ... 180s Setting up openjdk-21-jre-headless:amd64 (21.0.4+7-1ubuntu2) ... 180s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode 180s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 180s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 180s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 180s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 180s Setting up libxtst6:amd64 (2:1.2.3-1.1build1) ... 180s Setting up libtest-warn-perl (0.37-2) ... 180s Setting up libxcursor1:amd64 (1:1.2.2-1) ... 180s Setting up libgl1-mesa-dri:amd64 (24.0.9-0ubuntu2) ... 180s Setting up libcommons-parent-java (56-1) ... 180s Setting up libavahi-common3:amd64 (0.8-13ubuntu6) ... 180s Setting up libtest-differences-perl (0.71-1) ... 180s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 180s Setting up libnet-http-perl (6.23-1) ... 180s Setting up libmagickcore-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... 180s Setting up dconf-service (0.40.0-4build2) ... 180s Setting up libexception-class-perl (1.45-1) ... 180s Setting up libcommons-lang-java (2.6-10) ... 180s Setting up libmagickwand-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... 180s Setting up libthai0:amd64 (0.1.29-2build1) ... 180s Setting up libtest-exception-perl (0.43-3) ... 180s Setting up cpp-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 180s Setting up cpp-14 (14.1.0-5ubuntu1) ... 180s Setting up imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... 180s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode 180s update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode 180s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode 180s update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode 180s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode 180s update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode 180s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode 180s update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode 180s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode 180s update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode 180s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode 180s update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode 180s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode 180s update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode 180s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode 180s update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode 180s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode 180s update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode 180s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode 180s update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode 180s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode 180s update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode 180s Setting up libwww-robotrules-perl (6.02-1) ... 180s Setting up libmbedtls14t64:amd64 (2.28.8-1) ... 180s Setting up libwayland-cursor0:amd64 (1.22.0-2.1build1) ... 180s Setting up libhtml-parser-perl:amd64 (3.82-1) ... 180s Setting up libgcc-14-dev:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libstdc++-14-dev:amd64 (14.1.0-5ubuntu1) ... 180s Setting up libavahi-client3:amd64 (0.8-13ubuntu6) ... 180s Setting up libio-socket-ssl-perl (2.088-1) ... 180s Setting up libhttp-message-perl (6.46-1ubuntu1) ... 180s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 180s Setting up libatk-bridge2.0-0t64:amd64 (2.52.0-1build1) ... 180s Setting up libhttp-negotiate-perl (6.01-2) ... 180s Setting up libglx-mesa0:amd64 (24.0.9-0ubuntu2) ... 180s Setting up libglx0:amd64 (1.7.0-1build1) ... 180s Setting up dconf-gsettings-backend:amd64 (0.40.0-4build2) ... 180s Setting up libhttp-cookies-perl (6.11-1) ... 180s Setting up libtest-most-perl (0.38-1) ... 180s Setting up libcommons-io-java (2.16.1-1) ... 180s Setting up libhtml-tree-perl (5.07-3) ... 180s Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ... 180s Setting up libxmlgraphics-commons-java (2.8-2) ... 180s Setting up ncbi-blast+ (2.16.0+ds-3) ... 180s Setting up libgl1:amd64 (1.7.0-1build1) ... 180s Setting up imagemagick (8:6.9.13.12+dfsg1-1) ... 180s Setting up cpp (4:14.1.0-2ubuntu1) ... 180s Setting up gcc-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 180s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 180s Setting up libcups2t64:amd64 (2.4.7-1.2ubuntu9) ... 180s Setting up libgtk-3-common (3.24.43-1ubuntu1) ... 180s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 180s Setting up bioperl (1.7.8-1) ... 180s Setting up ncbi-blast+-legacy (2.16.0+ds-3) ... 180s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 180s Setting up libbatik-java (1.17+dfsg-1) ... 180s Setting up gcc-14 (14.1.0-5ubuntu1) ... 180s Setting up g++-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 180s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 180s Setting up g++-14 (14.1.0-5ubuntu1) ... 180s Setting up gcc (4:14.1.0-2ubuntu1) ... 180s Setting up g++ (4:14.1.0-2ubuntu1) ... 180s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 180s Setting up build-essential (12.10ubuntu1) ... 180s Setting up adwaita-icon-theme (46.0-1) ... 180s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 180s Setting up liblwp-protocol-https-perl (6.14-1) ... 180s Setting up libwww-perl (6.77-1) ... 180s Setting up humanity-icon-theme (0.6.16) ... 180s Setting up ubuntu-mono (24.04-0ubuntu1) ... 180s Processing triggers for man-db (2.12.1-2) ... 182s Processing triggers for libglib2.0-0t64:amd64 (2.80.4-1ubuntu1) ... 182s Setting up libgtk-3-0t64:amd64 (3.24.43-1ubuntu1) ... 182s Processing triggers for libc-bin (2.39-0ubuntu9) ... 182s Processing triggers for ca-certificates-java (20240118) ... 182s Adding debian:ACCVRAIZ1.pem 182s Adding debian:AC_RAIZ_FNMT-RCM.pem 182s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 182s Adding debian:ANF_Secure_Server_Root_CA.pem 182s Adding debian:Actalis_Authentication_Root_CA.pem 182s Adding debian:AffirmTrust_Commercial.pem 182s Adding debian:AffirmTrust_Networking.pem 182s Adding debian:AffirmTrust_Premium.pem 182s Adding debian:AffirmTrust_Premium_ECC.pem 182s Adding debian:Amazon_Root_CA_1.pem 182s Adding debian:Amazon_Root_CA_2.pem 182s Adding debian:Amazon_Root_CA_3.pem 182s Adding debian:Amazon_Root_CA_4.pem 182s Adding debian:Atos_TrustedRoot_2011.pem 182s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 182s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 182s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 182s Adding debian:BJCA_Global_Root_CA1.pem 182s Adding debian:BJCA_Global_Root_CA2.pem 182s Adding debian:Baltimore_CyberTrust_Root.pem 182s Adding debian:Buypass_Class_2_Root_CA.pem 182s Adding debian:Buypass_Class_3_Root_CA.pem 182s Adding debian:CA_Disig_Root_R2.pem 182s Adding debian:CFCA_EV_ROOT.pem 182s Adding debian:COMODO_Certification_Authority.pem 182s Adding debian:COMODO_ECC_Certification_Authority.pem 182s Adding debian:COMODO_RSA_Certification_Authority.pem 182s Adding debian:Certainly_Root_E1.pem 182s Adding debian:Certainly_Root_R1.pem 182s Adding debian:Certigna.pem 182s Adding debian:Certigna_Root_CA.pem 182s Adding debian:Certum_EC-384_CA.pem 182s Adding debian:Certum_Trusted_Network_CA.pem 182s Adding debian:Certum_Trusted_Network_CA_2.pem 182s Adding debian:Certum_Trusted_Root_CA.pem 182s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 182s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 182s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 182s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 182s Adding debian:Comodo_AAA_Services_root.pem 182s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 182s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 182s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 182s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 182s Adding debian:DigiCert_Assured_ID_Root_CA.pem 182s Adding debian:DigiCert_Assured_ID_Root_G2.pem 182s Adding debian:DigiCert_Assured_ID_Root_G3.pem 182s Adding debian:DigiCert_Global_Root_CA.pem 182s Adding debian:DigiCert_Global_Root_G2.pem 182s Adding debian:DigiCert_Global_Root_G3.pem 182s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 182s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 182s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 182s Adding debian:DigiCert_Trusted_Root_G4.pem 182s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 182s Adding debian:Entrust_Root_Certification_Authority.pem 182s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 182s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 182s Adding debian:Entrust_Root_Certification_Authority_-_G4.pem 182s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 182s Adding debian:GLOBALTRUST_2020.pem 182s Adding debian:GTS_Root_R1.pem 182s Adding debian:GTS_Root_R2.pem 182s Adding debian:GTS_Root_R3.pem 182s Adding debian:GTS_Root_R4.pem 182s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 182s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 182s Adding debian:GlobalSign_Root_CA.pem 182s Adding debian:GlobalSign_Root_CA_-_R3.pem 182s Adding debian:GlobalSign_Root_CA_-_R6.pem 182s Adding debian:GlobalSign_Root_E46.pem 183s Adding debian:GlobalSign_Root_R46.pem 183s Adding debian:Go_Daddy_Class_2_CA.pem 183s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 183s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 183s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 183s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 183s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 183s Adding debian:HiPKI_Root_CA_-_G1.pem 183s Adding debian:Hongkong_Post_Root_CA_3.pem 183s Adding debian:ISRG_Root_X1.pem 183s Adding debian:ISRG_Root_X2.pem 183s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 183s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 183s Adding debian:Izenpe.com.pem 183s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 183s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 183s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 183s Adding debian:NAVER_Global_Root_Certification_Authority.pem 183s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 183s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 183s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 183s Adding debian:QuoVadis_Root_CA_1_G3.pem 183s Adding debian:QuoVadis_Root_CA_2.pem 183s Adding debian:QuoVadis_Root_CA_2_G3.pem 183s Adding debian:QuoVadis_Root_CA_3.pem 183s Adding debian:QuoVadis_Root_CA_3_G3.pem 183s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 183s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 183s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 183s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 183s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 183s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 183s Adding debian:SZAFIR_ROOT_CA2.pem 183s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 183s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 183s Adding debian:SecureSign_RootCA11.pem 183s Adding debian:SecureTrust_CA.pem 183s Adding debian:Secure_Global_CA.pem 183s Adding debian:Security_Communication_ECC_RootCA1.pem 183s Adding debian:Security_Communication_RootCA2.pem 183s Adding debian:Security_Communication_RootCA3.pem 183s Adding debian:Security_Communication_Root_CA.pem 183s Adding debian:Starfield_Class_2_CA.pem 183s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 183s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 183s Adding debian:SwissSign_Gold_CA_-_G2.pem 183s Adding debian:SwissSign_Silver_CA_-_G2.pem 183s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 183s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 183s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 183s Adding debian:TWCA_Global_Root_CA.pem 183s Adding debian:TWCA_Root_Certification_Authority.pem 183s Adding debian:TeliaSonera_Root_CA_v1.pem 183s Adding debian:Telia_Root_CA_v2.pem 183s Adding debian:TrustAsia_Global_Root_CA_G3.pem 183s Adding debian:TrustAsia_Global_Root_CA_G4.pem 183s Adding debian:Trustwave_Global_Certification_Authority.pem 183s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 183s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 183s Adding debian:TunTrust_Root_CA.pem 183s Adding debian:UCA_Extended_Validation_Root.pem 183s Adding debian:UCA_Global_G2_Root.pem 183s Adding debian:USERTrust_ECC_Certification_Authority.pem 183s Adding debian:USERTrust_RSA_Certification_Authority.pem 183s Adding debian:XRamp_Global_CA_Root.pem 183s Adding debian:certSIGN_ROOT_CA.pem 183s Adding debian:certSIGN_Root_CA_G2.pem 183s Adding debian:e-Szigno_Root_CA_2017.pem 183s Adding debian:ePKI_Root_Certification_Authority.pem 183s Adding debian:emSign_ECC_Root_CA_-_C3.pem 183s Adding debian:emSign_ECC_Root_CA_-_G3.pem 183s Adding debian:emSign_Root_CA_-_C1.pem 183s Adding debian:emSign_Root_CA_-_G1.pem 183s Adding debian:vTrus_ECC_Root_CA.pem 183s Adding debian:vTrus_Root_CA.pem 183s done. 183s Setting up openjdk-21-jre:amd64 (21.0.4+7-1ubuntu2) ... 183s Setting up default-jre-headless (2:1.21-75+exp1) ... 183s Setting up default-jre (2:1.21-75+exp1) ... 183s Setting up cgview (0.0.20100111-7) ... 183s Setting up cct (1:1.0.3-1) ... 183s Setting up cct-examples (1:1.0.3-1) ... 184s Reading package lists... 184s Building dependency tree... 184s Reading state information... 184s Starting pkgProblemResolver with broken count: 0 184s Starting 2 pkgProblemResolver with broken count: 0 184s Done 185s The following NEW packages will be installed: 185s autopkgtest-satdep 185s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 185s Need to get 0 B/696 B of archives. 185s After this operation, 0 B of additional disk space will be used. 185s Get:1 /tmp/autopkgtest.EByNLJ/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [696 B] 185s Selecting previously unselected package autopkgtest-satdep. 185s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 93220 files and directories currently installed.) 185s Preparing to unpack .../2-autopkgtest-satdep.deb ... 185s Unpacking autopkgtest-satdep (0) ... 185s Setting up autopkgtest-satdep (0) ... 188s (Reading database ... 93220 files and directories currently installed.) 188s Removing autopkgtest-satdep (0) ... 189s autopkgtest [01:31:23]: test run-unit-test: [----------------------- 189s 'Check environment' test passed 189s Copying and extracting COG files 190s Preparing COG BLAST database 194s COG BLAST database created 194s Processing project 'test_blastn' 194s Processing project 'test_blastn' using configuration 'project_settings.conf' 194s [Saturday July 27 01:31:28 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastn/project_settings.conf. 194s [Saturday July 27 01:31:28 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome for BLAST searches. 195s [Saturday July 27 01:31:29 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastn/reference_genome/split. 195s [Saturday July 27 01:31:29 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_blastn/comparison_genomes for BLAST searches. 195s [Saturday July 27 01:31:29 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_blastn/comparison_genomes/split. 195s [Saturday July 27 01:31:29 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastn/comparison_genomes/split. 195s [Saturday July 27 01:31:29 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastn/blast/blast_db. 195s [Saturday July 27 01:31:29 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastn/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastn/blast/blast_db. 196s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 196s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 196s Writing HSP to file. 196s Writing HSP to file. 196s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn to view the BLAST results. 196s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 196s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 196s Writing HSP to file. 196s Writing HSP to file. 196s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results. 196s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 196s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 196s Writing HSP to file. 196s Writing HSP to file. 196s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn to view the BLAST results. 196s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 196s Warning: [blastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 196s Writing HSP to file. 196s Writing HSP to file. 196s Open /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn to view the BLAST results. 196s [Saturday July 27 01:31:30 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastn/blast/blast_results_local. 196s [Saturday July 27 01:31:30 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastn/reference_genome. 196s [Saturday July 27 01:31:30 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastn/features. 196s [Saturday July 27 01:31:30 2024] [Notice] Creating CGView XML files. 196s [Saturday July 27 01:31:30 2024] [Notice] The following BLAST results will be drawn, from outside to center: 196s [Saturday July 27 01:31:30 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn 196s [Saturday July 27 01:31:30 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn 196s [Saturday July 27 01:31:30 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn 196s [Saturday July 27 01:31:30 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn 197s Creating XML for feature sets on the outside of the backbone circle. 197s Feature sets written first are drawn closest to the backbone circle. 197s Creating XML for ORFs that are in reading frame +1. 197s Creating XML for ORFs that are in reading frame +2. 197s Creating XML for ORFs that are in reading frame +3. 197s Creating XML for feature sets on the inside of the backbone circle. 197s Feature sets written first are drawn closest to the backbone circle. 197s Creating XML for ORFs that are in reading frame -1. 197s Creating XML for ORFs that are in reading frame -2. 197s Creating XML for ORFs that are in reading frame -3. 197s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_blastn. 197s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_blastn. 197s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_blastn. 197s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_blastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_blastn. 197s Creating XML for GC content information. 197s Plotting GC content using a window size of 500 and a step of 1. 197s The maximum GC content value is 0.5768. 197s The minimum GC content value is 0.4311. 197s The average GC content value is 0.5051. 197s GC content will be scaled based on the maximum and minimum values. 197s GC content will be plotted as the deviation from the average value. 197s Creating XML for GC skew information. 197s Plotting GC skew using a window size of 500 and a step of 1. 197s The maximum GC skew value is 0.1587. 197s The minimum GC skew value is -0.2263. 197s The average GC skew value is -0.0036. 197s GC skew will be scaled based on the maximum and minimum values. 197s GC skew will be plotted as the deviation from the average value. 197s CGView XML file complete. 197s The recommended CGView command is: 197s ---------------------------------- 197s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastn/maps/cgview_xml/test_blastn_project_settings.conf_medium.xml -o map.png 197s Success! 197s The following key-values were used: 197s ----------------------------------- 197s arrowheadLength=6 197s average=T 197s atColorNeg=rgb(51,51,51) 197s atColorPos=rgb(51,51,51) 197s at_content=F 197s atSkewColorNeg=rgb(0,0,153) 197s atSkewColorPos=rgb(153,153,0) 197s at_skew=F 197s backboneColor=rgb(102,102,102) 197s backboneRadius=1000 197s backboneThickness=8 197s backgroundColor=white 197s blast_divider_ruler=F 197s blastRulerColor=rgb(255,165,0) 197s borderColor=black 197s combined_orfs=F 197s details=T 197s draw_divider_rings=T 197s featureOpacity=0.5 197s featureOpacityOther=0.5 197s featureSlotSpacing=6 197s featureThickness=24.27 197s featureThicknessPlot=145.64 197s feature_labels=F 197s gcColorNeg=rgb(0,0,0) 197s gcColorPos=rgb(0,0,0) 197s gc_content=T 197s gcSkewColorNeg=rgb(153,0,153) 197s gcSkewColorPos=rgb(0,153,0) 197s gc_skew=T 197s gene_decoration=arrow 197s gene_labels=F 197s global_label=true 197s height=3000 197s hit_labels=F 197s labelFontSize=15 197s labelPlacementQuality=good 197s labelLineLength=200 197s labelLineThickness=4 197s legend=T 197s legendFontSize=20 197s orf_labels=F 197s maxLabelLength=20 197s maxLegendLength=30 197s maxTitleLength=50 197s minimumFeatureLength=0.2 197s moveInnerLabelsToOuter=false 197s orfColor=rgb(204,0,0) 197s orfs=T 197s orf_size=25 197s otherColor=rgb(51,51,51) 197s parse_reading_frame=F 197s proteinColor=rgb(0,0,153) 197s reading_frames=F 197s rRNAColor=rgb(153,0,153) 197s rulerFontColor=rgb(0,0,0) 197s rulerFontSize=30 197s rulerPadding=40 197s scale=T 197s scale_blast=T 197s show_sequence_features=T 197s show_queries=F 197s startColor=rgb(153,0,153) 197s starts=ttg|ctg|att|atc|ata|atg|gtg 197s step=1 197s stopColor=rgb(204,0,0) 197s stops=taa|tag|tga 197s title= 197s titleFontSize=80 197s tickColor=rgb(0,51,0) 197s tickLength=15 197s tickThickness=6 197s tick_density=0.166666666666667 197s tRNAColor=rgb(153,0,0) 197s useInnerLabels=true 197s use_opacity=F 197s width=3000 197s window=500 197s ----------------------------------- 197s [Saturday July 27 01:31:31 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastn/maps/cgview_xml. 197s [Saturday July 27 01:31:31 2024] [Notice] Creating CGView maps. 197s Parsing XML input. 200s Drawing features.......................... 200s Positioning and drawing 0 labels.......................... 200s 0 labels were removed. 200s Drawing tick marks. 200s Drawing legends. 200s The map has been drawn. 200s Writing picture to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.png 201s Writing HTML to /var/tmp/cct/test_output/test_blastn/maps/test_blastn_project_settings.html 201s [Saturday July 27 01:31:35 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastn/maps. 201s Processing project 'test_plots' 201s Processing project 'test_plots' using configuration 'project_settings.conf' 201s [Saturday July 27 01:31:35 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_plots/project_settings.conf. 201s [Saturday July 27 01:31:35 2024] [Notice] Creating CGView XML files. 201s Creating XML for feature sets on the outside of the backbone circle. 201s Feature sets written first are drawn closest to the backbone circle. 201s Creating XML for ORFs that are in reading frame +1. 201s Creating XML for ORFs that are in reading frame +2. 201s Creating XML for ORFs that are in reading frame +3. 201s Creating XML for feature sets on the inside of the backbone circle. 201s Feature sets written first are drawn closest to the backbone circle. 201s Creating XML for ORFs that are in reading frame -1. 201s Creating XML for ORFs that are in reading frame -2. 201s Creating XML for ORFs that are in reading frame -3. 201s Creating XML for GC content information. 201s Plotting GC content using a window size of 50 and a step of 1. 201s The maximum GC content value is 1.0000. 201s The minimum GC content value is 0.0000. 201s The average GC content value is 0.6000. 201s GC content will be scaled based on the maximum and minimum values. 201s GC content will be plotted as the deviation from the average value. 201s Creating XML for GC skew information. 201s Plotting GC skew using a window size of 50 and a step of 1. 201s The maximum GC skew value is 1.0000. 201s The minimum GC skew value is -1.0000. 201s The average GC skew value is -0.3333. 201s GC skew will be scaled based on the maximum and minimum values. 201s GC skew will be plotted as the deviation from the average value. 201s CGView XML file complete. 201s The recommended CGView command is: 201s ---------------------------------- 201s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_plots/maps/cgview_xml/test_plots_project_settings.conf_medium.xml -o map.png 201s Success! 201s The following key-values were used: 201s ----------------------------------- 201s arrowheadLength=6 201s average=T 201s atColorNeg=rgb(51,51,51) 201s atColorPos=rgb(51,51,51) 201s at_content=F 201s atSkewColorNeg=rgb(0,0,153) 201s atSkewColorPos=rgb(153,153,0) 201s at_skew=F 201s backboneColor=rgb(102,102,102) 201s backboneRadius=1000 201s backboneThickness=8 201s backgroundColor=white 201s blast_divider_ruler=F 201s blastRulerColor=rgb(255,165,0) 201s borderColor=black 201s combined_orfs=F 201s details=T 201s draw_divider_rings=T 201s featureOpacity=0.5 201s featureOpacityOther=0.5 201s featureSlotSpacing=6 201s featureThickness=30 201s featureThicknessPlot=186.00 201s feature_labels=F 201s gcColorNeg=rgb(0,0,0) 201s gcColorPos=rgb(0,0,0) 201s gc_content=T 201s gcSkewColorNeg=rgb(153,0,153) 201s gcSkewColorPos=rgb(0,153,0) 201s gc_skew=T 201s gene_decoration=arrow 201s gene_labels=F 201s global_label=true 201s height=3000 201s hit_labels=F 201s labelFontSize=15 201s labelPlacementQuality=good 201s labelLineLength=200 201s labelLineThickness=4 201s legend=T 201s legendFontSize=20 201s orf_labels=F 201s maxLabelLength=20 201s maxLegendLength=30 201s maxTitleLength=50 201s minimumFeatureLength=0.2 201s moveInnerLabelsToOuter=false 201s orfColor=rgb(204,0,0) 201s orfs=T 201s orf_size=25 201s otherColor=rgb(51,51,51) 201s parse_reading_frame=F 201s proteinColor=rgb(0,0,153) 201s reading_frames=F 201s rRNAColor=rgb(153,0,153) 201s rulerFontColor=rgb(0,0,0) 201s rulerFontSize=30 201s rulerPadding=40 201s scale=T 201s scale_blast=T 201s show_sequence_features=T 201s show_queries=F 201s startColor=rgb(153,0,153) 201s starts=ttg|ctg|att|atc|ata|atg|gtg 201s step=1 201s stopColor=rgb(204,0,0) 201s stops=taa|tag|tga 201s title= 201s titleFontSize=80 201s tickColor=rgb(0,51,0) 201s tickLength=15 201s tickThickness=6 201s tick_density=0.166666666666667 201s tRNAColor=rgb(153,0,0) 201s useInnerLabels=true 201s use_opacity=F 201s width=3000 201s window=50 201s ----------------------------------- 201s [Saturday July 27 01:31:35 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_plots/maps/cgview_xml. 201s [Saturday July 27 01:31:35 2024] [Notice] Creating CGView maps. 201s Parsing XML input. 202s Drawing features.................. 202s Positioning and drawing 0 labels.......................... 202s 0 labels were removed. 202s Drawing tick marks. 202s Drawing legends. 202s The map has been drawn. 202s Writing picture to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.png 203s Writing HTML to /var/tmp/cct/test_output/test_plots/maps/test_plots_project_settings.html 203s [Saturday July 27 01:31:37 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_plots/maps. 203s Processing project 'test_blastp' 203s Processing project 'test_blastp' using configuration 'project_settings.conf' 203s [Saturday July 27 01:31:37 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastp/project_settings.conf. 203s [Saturday July 27 01:31:37 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome for BLAST searches. 203s Extracting ORFs in reading frame 1 on strand 1. 203s Extracting ORFs in reading frame 2 on strand 1. 203s Extracting ORFs in reading frame 3 on strand 1. 203s Extracting ORFs in reading frame 1 on strand -1. 203s Extracting ORFs in reading frame 2 on strand -1. 203s Extracting ORFs in reading frame 3 on strand -1. 203s A total of 338 records were written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs. 203s [Saturday July 27 01:31:37 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_blastp/reference_genome/orfs. 203s [Saturday July 27 01:31:37 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastp/comparison_genomes for BLAST searches. 203s [Saturday July 27 01:31:37 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins. 203s [Saturday July 27 01:31:37 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastp/comparison_genomes/proteins. 203s [Saturday July 27 01:31:37 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastp/blast/blast_db. 203s [Saturday July 27 01:31:37 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastp/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_blastp/blast/blast_db. 203s [Saturday July 27 01:31:37 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastp/blast/blast_results_local. 203s [Saturday July 27 01:31:37 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastp/reference_genome. 203s [Saturday July 27 01:31:37 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastp/features. 203s [Saturday July 27 01:31:37 2024] [Notice] Creating CGView XML files. 204s Creating XML for feature sets on the outside of the backbone circle. 204s Feature sets written first are drawn closest to the backbone circle. 204s Creating XML for ORFs that are in reading frame +1. 204s Creating XML for ORFs that are in reading frame +2. 204s Creating XML for ORFs that are in reading frame +3. 204s Creating XML for feature sets on the inside of the backbone circle. 204s Feature sets written first are drawn closest to the backbone circle. 204s Creating XML for ORFs that are in reading frame -1. 204s Creating XML for ORFs that are in reading frame -2. 204s Creating XML for ORFs that are in reading frame -3. 204s Creating XML for GC content information. 204s Plotting GC content using a window size of 500 and a step of 1. 204s The maximum GC content value is 0.5768. 204s The minimum GC content value is 0.4311. 204s The average GC content value is 0.5051. 204s GC content will be scaled based on the maximum and minimum values. 204s GC content will be plotted as the deviation from the average value. 204s Creating XML for GC skew information. 204s Plotting GC skew using a window size of 500 and a step of 1. 204s The maximum GC skew value is 0.1587. 204s The minimum GC skew value is -0.2263. 204s The average GC skew value is -0.0036. 204s GC skew will be scaled based on the maximum and minimum values. 204s GC skew will be plotted as the deviation from the average value. 204s CGView XML file complete. 204s The recommended CGView command is: 204s ---------------------------------- 204s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastp/maps/cgview_xml/test_blastp_project_settings.conf_medium.xml -o map.png 204s Success! 204s The following key-values were used: 204s ----------------------------------- 204s arrowheadLength=6 204s average=T 204s atColorNeg=rgb(51,51,51) 204s atColorPos=rgb(51,51,51) 204s at_content=F 204s atSkewColorNeg=rgb(0,0,153) 204s atSkewColorPos=rgb(153,153,0) 204s at_skew=F 204s backboneColor=rgb(102,102,102) 204s backboneRadius=1000 204s backboneThickness=8 204s backgroundColor=white 204s blast_divider_ruler=F 204s blastRulerColor=rgb(255,165,0) 204s borderColor=black 204s combined_orfs=F 204s details=T 204s draw_divider_rings=T 204s featureOpacity=0.5 204s featureOpacityOther=0.5 204s featureSlotSpacing=6 204s featureThickness=30 204s featureThicknessPlot=186.00 204s feature_labels=F 204s gcColorNeg=rgb(0,0,0) 204s gcColorPos=rgb(0,0,0) 204s gc_content=T 204s gcSkewColorNeg=rgb(153,0,153) 204s gcSkewColorPos=rgb(0,153,0) 204s gc_skew=T 204s gene_decoration=arrow 204s gene_labels=F 204s global_label=true 204s height=3000 204s hit_labels=F 204s labelFontSize=15 204s labelPlacementQuality=good 204s labelLineLength=200 204s labelLineThickness=4 204s legend=T 204s legendFontSize=20 204s orf_labels=F 204s maxLabelLength=20 204s maxLegendLength=30 204s maxTitleLength=50 204s minimumFeatureLength=0.2 204s moveInnerLabelsToOuter=false 204s orfColor=rgb(204,0,0) 204s orfs=T 204s orf_size=25 204s otherColor=rgb(51,51,51) 204s parse_reading_frame=F 204s proteinColor=rgb(0,0,153) 204s reading_frames=F 204s rRNAColor=rgb(153,0,153) 204s rulerFontColor=rgb(0,0,0) 204s rulerFontSize=30 204s rulerPadding=40 204s scale=T 204s scale_blast=T 204s show_sequence_features=T 204s show_queries=F 204s startColor=rgb(153,0,153) 204s starts=ttg|ctg|att|atc|ata|atg|gtg 204s step=1 204s stopColor=rgb(204,0,0) 204s stops=taa|tag|tga 204s title= 204s titleFontSize=80 204s tickColor=rgb(0,51,0) 204s tickLength=15 204s tickThickness=6 204s tick_density=0.166666666666667 204s tRNAColor=rgb(153,0,0) 204s useInnerLabels=true 204s use_opacity=F 204s width=3000 204s window=500 204s ----------------------------------- 204s [Saturday July 27 01:31:38 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastp/maps/cgview_xml. 204s [Saturday July 27 01:31:38 2024] [Notice] Creating CGView maps. 204s Parsing XML input. 206s Drawing features.................. 206s Positioning and drawing 0 labels.......................... 206s 0 labels were removed. 206s Drawing tick marks. 206s Drawing legends. 206s The map has been drawn. 206s Writing picture to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.png 207s Writing HTML to /var/tmp/cct/test_output/test_blastp/maps/test_blastp_project_settings.html 207s [Saturday July 27 01:31:41 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastp/maps. 207s Processing project 'test_tblastx' 207s Processing project 'test_tblastx' using configuration 'project_settings.conf' 207s [Saturday July 27 01:31:41 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastx/project_settings.conf. 207s [Saturday July 27 01:31:41 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome for BLAST searches. 207s [Saturday July 27 01:31:41 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_tblastx/reference_genome/split. 207s [Saturday July 27 01:31:41 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastx/comparison_genomes for BLAST searches. 208s [Saturday July 27 01:31:42 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split. 208s [Saturday July 27 01:31:42 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastx/comparison_genomes/split. 208s [Saturday July 27 01:31:42 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastx/blast/blast_db. 208s [Saturday July 27 01:31:42 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_tblastx/blast/blast_db. 208s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 208s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Writing HSP to file. 208s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx to view the BLAST results. 208s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 209s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results. 209s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 209s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx to view the BLAST results. 209s Performing BLAST search for sequence number 1 (_start=1;end=16000;length=16000;source_length=16000). 209s Warning: [tblastx] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Writing HSP to file. 209s Open /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx to view the BLAST results. 209s [Saturday July 27 01:31:43 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local. 209s [Saturday July 27 01:31:43 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastx/reference_genome. 209s [Saturday July 27 01:31:43 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastx/features. 209s [Saturday July 27 01:31:43 2024] [Notice] Creating CGView XML files. 209s [Saturday July 27 01:31:43 2024] [Notice] The following BLAST results will be drawn, from outside to center: 209s [Saturday July 27 01:31:43 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx 209s [Saturday July 27 01:31:43 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx 209s [Saturday July 27 01:31:43 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx 209s [Saturday July 27 01:31:43 2024] [Notice] two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx 209s Creating XML for feature sets on the outside of the backbone circle. 209s Feature sets written first are drawn closest to the backbone circle. 209s Creating XML for ORFs that are in reading frame +1. 209s Creating XML for ORFs that are in reading frame +2. 209s Creating XML for ORFs that are in reading frame +3. 209s Creating XML for feature sets on the inside of the backbone circle. 209s Feature sets written first are drawn closest to the backbone circle. 209s Creating XML for ORFs that are in reading frame -1. 209s Creating XML for ORFs that are in reading frame -2. 209s Creating XML for ORFs that are in reading frame -3. 209s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf.fasta_split_DNA_tblastx. 209s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastx. 209s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf.fasta_split_DNA_tblastx. 209s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastx/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_DNA_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastx. 209s Creating XML for GC content information. 209s Plotting GC content using a window size of 500 and a step of 1. 209s The maximum GC content value is 0.5768. 209s The minimum GC content value is 0.4311. 209s The average GC content value is 0.5051. 209s GC content will be scaled based on the maximum and minimum values. 209s GC content will be plotted as the deviation from the average value. 209s Creating XML for GC skew information. 209s Plotting GC skew using a window size of 500 and a step of 1. 209s The maximum GC skew value is 0.1587. 209s The minimum GC skew value is -0.2263. 209s The average GC skew value is -0.0036. 209s GC skew will be scaled based on the maximum and minimum values. 209s GC skew will be plotted as the deviation from the average value. 209s CGView XML file complete. 209s The recommended CGView command is: 209s ---------------------------------- 209s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml/test_tblastx_project_settings.conf_medium.xml -o map.png 209s Success! 209s The following key-values were used: 209s ----------------------------------- 209s arrowheadLength=6 209s average=T 209s atColorNeg=rgb(51,51,51) 209s atColorPos=rgb(51,51,51) 209s at_content=F 209s atSkewColorNeg=rgb(0,0,153) 209s atSkewColorPos=rgb(153,153,0) 209s at_skew=F 209s backboneColor=rgb(102,102,102) 209s backboneRadius=1000 209s backboneThickness=8 209s backgroundColor=white 209s blast_divider_ruler=F 209s blastRulerColor=rgb(255,165,0) 209s borderColor=black 209s combined_orfs=F 209s details=T 209s draw_divider_rings=T 209s featureOpacity=0.5 209s featureOpacityOther=0.5 209s featureSlotSpacing=6 209s featureThickness=9.86 209s featureThicknessPlot=59.14 209s feature_labels=F 209s gcColorNeg=rgb(0,0,0) 209s gcColorPos=rgb(0,0,0) 209s gc_content=T 209s gcSkewColorNeg=rgb(153,0,153) 209s gcSkewColorPos=rgb(0,153,0) 209s gc_skew=T 209s gene_decoration=arrow 209s gene_labels=F 209s global_label=true 209s height=3000 209s hit_labels=F 209s labelFontSize=15 209s labelPlacementQuality=good 209s labelLineLength=200 209s labelLineThickness=4 209s legend=T 209s legendFontSize=20 209s orf_labels=F 209s maxLabelLength=20 209s maxLegendLength=30 209s maxTitleLength=50 209s minimumFeatureLength=0.2 209s moveInnerLabelsToOuter=false 209s orfColor=rgb(204,0,0) 209s orfs=T 209s orf_size=25 209s otherColor=rgb(51,51,51) 209s parse_reading_frame=T 209s proteinColor=rgb(0,0,153) 209s reading_frames=F 209s rRNAColor=rgb(153,0,153) 209s rulerFontColor=rgb(0,0,0) 209s rulerFontSize=30 209s rulerPadding=40 209s scale=T 209s scale_blast=T 209s show_sequence_features=T 209s show_queries=T 209s startColor=rgb(153,0,153) 209s starts=ttg|ctg|att|atc|ata|atg|gtg 209s step=1 209s stopColor=rgb(204,0,0) 209s stops=taa|tag|tga 209s title= 209s titleFontSize=80 209s tickColor=rgb(0,51,0) 209s tickLength=15 209s tickThickness=6 209s tick_density=0.166666666666667 209s tRNAColor=rgb(153,0,0) 209s useInnerLabels=true 209s use_opacity=F 209s width=3000 209s window=500 209s ----------------------------------- 210s [Saturday July 27 01:31:44 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastx/maps/cgview_xml. 210s [Saturday July 27 01:31:44 2024] [Notice] Creating CGView maps. 210s Parsing XML input. 212s Drawing features.................................................................. 212s Positioning and drawing 0 labels.......................... 212s 0 labels were removed. 212s Drawing tick marks. 212s Drawing legends. 212s The map has been drawn. 212s Writing picture to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.png 213s Writing HTML to /var/tmp/cct/test_output/test_tblastx/maps/test_tblastx_project_settings.html 213s [Saturday July 27 01:31:47 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastx/maps. 213s Processing project 'test_tblastn' 213s Processing project 'test_tblastn' using configuration 'project_settings.conf' 213s [Saturday July 27 01:31:47 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_tblastn/project_settings.conf. 213s [Saturday July 27 01:31:47 2024] [Notice] Extracting ORF translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome for BLAST searches. 213s Extracting ORFs in reading frame 1 on strand 1. 213s Extracting ORFs in reading frame 2 on strand 1. 213s Extracting ORFs in reading frame 3 on strand 1. 213s Extracting ORFs in reading frame 1 on strand -1. 213s Extracting ORFs in reading frame 2 on strand -1. 213s Extracting ORFs in reading frame 3 on strand -1. 213s A total of 338 records were written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs/two_copies_of_long_ORF_opposite_directions.fasta_orfs. 213s [Saturday July 27 01:31:47 2024] [Notice] Reference genome ORF translations have been written to /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs. 213s [Saturday July 27 01:31:47 2024] [Notice] Splitting the comparison genome sequences in /var/tmp/cct/test_output/test_tblastn/comparison_genomes for BLAST searches. 214s [Saturday July 27 01:31:48 2024] [Notice] Comparison genome sequences have been split and written to /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split. 214s [Saturday July 27 01:31:48 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_tblastn/comparison_genomes/split. 214s [Saturday July 27 01:31:48 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_tblastn/blast/blast_db. 214s [Saturday July 27 01:31:48 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_tblastn/reference_genome/orfs and databases in /var/tmp/cct/test_output/test_tblastn/blast/blast_db. 214s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 214s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 214s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 214s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 214s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Writing HSP to file. 215s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 215s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 215s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Writing HSP to file. 216s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Writing HSP to file. 216s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Writing HSP to file. 216s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 216s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 216s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Writing HSP to file. 217s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 217s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 217s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 218s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 218s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 219s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 219s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 220s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 220s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 221s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 221s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Writing HSP to file. 222s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 222s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 222s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Writing HSP to file. 223s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 223s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 223s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 224s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 224s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Writing HSP to file. 225s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 225s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 225s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 226s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 226s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 227s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 227s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Writing HSP to file. 228s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 228s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 228s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Writing HSP to file. 229s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 229s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 229s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 230s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 230s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Writing HSP to file. 231s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Writing HSP to file. 231s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 231s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 231s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Writing HSP to file. 232s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Writing HSP to file. 232s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 232s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 232s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 233s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 233s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 234s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 234s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 235s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 235s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 236s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 236s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 236s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 237s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 237s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 238s Writing HSP to file. 238s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 238s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 239s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 239s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 240s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 240s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Writing HSP to file. 241s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 241s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 241s Writing HSP to file. 241s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Writing HSP to file. 242s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 242s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 242s Writing HSP to file. 242s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 243s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 243s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Writing HSP to file. 244s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 244s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 244s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 245s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 245s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 246s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 246s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Writing HSP to file. 247s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 247s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 247s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Writing HSP to file. 248s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Writing HSP to file. 248s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Writing HSP to file. 248s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 248s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 248s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Writing HSP to file. 249s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 249s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 249s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 250s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 250s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 251s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 251s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 252s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 252s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Writing HSP to file. 253s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 253s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 253s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 254s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 254s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Writing HSP to file. 255s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 255s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 255s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Writing HSP to file. 256s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Writing HSP to file. 256s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 256s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 256s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 257s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 257s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn to view the BLAST results. 258s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 258s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 258s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Writing HSP to file. 259s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 259s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 259s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Writing HSP to file. 260s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Writing HSP to file. 260s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Writing HSP to file. 260s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 260s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 260s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Writing HSP to file. 261s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 261s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 261s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 262s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 262s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 263s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 263s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 264s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 264s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Writing HSP to file. 265s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 265s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 265s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 266s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 266s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Writing HSP to file. 267s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 267s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 267s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Writing HSP to file. 268s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 268s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 268s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 269s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 269s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 270s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 270s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Writing HSP to file. 271s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 271s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 271s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 271s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Writing HSP to file. 272s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 272s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 272s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 273s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 273s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Writing HSP to file. 274s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Writing HSP to file. 274s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 274s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 274s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Writing HSP to file. 275s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 275s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 275s Writing HSP to file. 275s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 276s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 276s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 277s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 277s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 278s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 278s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 279s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 279s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 280s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 280s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Writing HSP to file. 281s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 281s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 281s Writing HSP to file. 281s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 282s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 282s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 283s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 283s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Writing HSP to file. 284s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 284s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 284s Writing HSP to file. 284s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Writing HSP to file. 285s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 285s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 285s Writing HSP to file. 285s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 286s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 286s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Writing HSP to file. 287s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 287s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 287s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 288s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 288s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 289s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 289s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Writing HSP to file. 290s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 290s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 290s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Writing HSP to file. 291s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Writing HSP to file. 291s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Writing HSP to file. 291s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 291s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 291s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Writing HSP to file. 292s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 292s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 292s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 293s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 293s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 294s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 294s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 295s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 295s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Writing HSP to file. 296s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 296s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 296s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Writing HSP to file. 297s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 297s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 297s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Writing HSP to file. 298s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 298s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 298s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Writing HSP to file. 299s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 299s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 299s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 300s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 300s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results. 301s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Writing HSP to file. 301s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 301s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 301s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 302s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 302s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 303s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 303s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 303s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Writing HSP to file. 304s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 304s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 304s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 305s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 305s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 306s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 306s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 307s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 307s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Writing HSP to file. 308s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Writing HSP to file. 308s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Writing HSP to file. 308s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 308s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 308s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Writing HSP to file. 309s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 309s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 309s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 310s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 310s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 311s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 311s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Writing HSP to file. 312s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Writing HSP to file. 312s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 312s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 312s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 313s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 313s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 314s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 314s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Writing HSP to file. 315s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 315s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 315s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 316s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 316s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 317s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 317s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Writing HSP to file. 318s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 318s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 318s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Writing HSP to file. 319s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 319s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 319s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Writing HSP to file. 320s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 320s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 320s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 320s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 321s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 321s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 322s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 322s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 323s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 323s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 324s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 324s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Writing HSP to file. 325s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 325s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 325s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Writing HSP to file. 326s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 326s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 326s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 327s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 327s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Writing HSP to file. 328s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 328s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 328s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 329s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 329s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 330s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 330s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Writing HSP to file. 331s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Writing HSP to file. 331s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 331s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 331s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 332s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 332s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 333s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 333s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Writing HSP to file. 334s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 334s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 334s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 335s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 335s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Writing HSP to file. 336s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 336s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 336s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Writing HSP to file. 337s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Writing HSP to file. 337s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 337s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 337s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Writing HSP to file. 338s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 338s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 338s Writing HSP to file. 338s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 339s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 339s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 340s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 340s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Writing HSP to file. 341s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 341s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 341s Writing HSP to file. 341s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn to view the BLAST results. 342s Performing BLAST search for sequence number 1 (orf_1_start=52;end=216;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 2 (orf_2_start=271;end=423;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 3 (orf_3_start=538;end=3540;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Writing HSP to file. 342s Performing BLAST search for sequence number 4 (orf_4_start=3748;end=3843;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 5 (orf_5_start=3883;end=4098;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 6 (orf_6_start=4111;end=4218;strand=1;rf=1). 342s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 342s Performing BLAST search for sequence number 7 (orf_7_start=4258;end=4479;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 8 (orf_8_start=4567;end=4854;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 9 (orf_9_start=4939;end=5136;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 10 (orf_10_start=5158;end=5373;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 11 (orf_11_start=5431;end=5529;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 12 (orf_12_start=5551;end=5703;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 13 (orf_13_start=5770;end=5985;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 14 (orf_14_start=6019;end=6093;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 15 (orf_15_start=6094;end=6171;strand=1;rf=1). 343s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 343s Performing BLAST search for sequence number 16 (orf_16_start=6214;end=6336;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 17 (orf_17_start=6730;end=6813;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 18 (orf_18_start=6976;end=7062;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 19 (orf_19_start=7303;end=7383;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 20 (orf_20_start=7435;end=7554;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 21 (orf_21_start=7564;end=7707;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 22 (orf_22_start=7855;end=7965;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 23 (orf_23_start=8044;end=8181;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 24 (orf_24_start=8251;end=8427;strand=1;rf=1). 344s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 344s Performing BLAST search for sequence number 25 (orf_25_start=8527;end=8688;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 26 (orf_26_start=9028;end=9144;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Writing HSP to file. 345s Performing BLAST search for sequence number 27 (orf_27_start=9181;end=9255;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 28 (orf_28_start=9439;end=9621;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 29 (orf_29_start=9700;end=9840;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 30 (orf_30_start=10138;end=10494;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 31 (orf_31_start=10495;end=10584;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 32 (orf_32_start=10687;end=10767;strand=1;rf=1). 345s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 345s Performing BLAST search for sequence number 33 (orf_33_start=10819;end=10980;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 34 (orf_34_start=11008;end=11085;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 35 (orf_35_start=11164;end=11238;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 36 (orf_36_start=11569;end=11742;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 37 (orf_37_start=11743;end=11976;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 38 (orf_38_start=12028;end=12132;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 39 (orf_39_start=12226;end=12333;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 40 (orf_40_start=12349;end=12537;strand=1;rf=1). 346s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 346s Performing BLAST search for sequence number 41 (orf_41_start=12544;end=12678;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 42 (orf_42_start=12955;end=13035;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 43 (orf_43_start=13198;end=13362;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 44 (orf_44_start=13426;end=13536;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 45 (orf_45_start=13558;end=13674;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 46 (orf_46_start=13825;end=13962;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 47 (orf_47_start=14029;end=14121;strand=1;rf=1). 347s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 347s Performing BLAST search for sequence number 48 (orf_48_start=14389;end=14586;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 49 (orf_49_start=14764;end=14850;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 50 (orf_50_start=14866;end=15039;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 51 (orf_51_start=15256;end=15333;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 52 (orf_52_start=15463;end=15561;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 53 (orf_53_start=15688;end=15873;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 54 (orf_54_start=15886;end=15966;strand=1;rf=1). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 55 (orf_55_start=221;end=373;strand=1;rf=2). 348s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 348s Performing BLAST search for sequence number 56 (orf_56_start=377;end=541;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 57 (orf_57_start=545;end=646;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Writing HSP to file. 349s Performing BLAST search for sequence number 58 (orf_58_start=647;end=754;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Writing HSP to file. 349s Performing BLAST search for sequence number 59 (orf_59_start=1406;end=1489;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 60 (orf_60_start=1502;end=1582;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 61 (orf_61_start=1658;end=1750;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 62 (orf_62_start=1919;end=1999;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 63 (orf_63_start=2003;end=2089;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Writing HSP to file. 349s Performing BLAST search for sequence number 64 (orf_64_start=2093;end=2179;strand=1;rf=2). 349s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 349s Performing BLAST search for sequence number 65 (orf_65_start=2195;end=2365;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 66 (orf_66_start=2564;end=2662;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 67 (orf_67_start=2687;end=2779;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 68 (orf_68_start=2831;end=2986;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 69 (orf_69_start=3290;end=3433;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Writing HSP to file. 350s Performing BLAST search for sequence number 70 (orf_70_start=3791;end=3895;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 71 (orf_71_start=3899;end=4003;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 72 (orf_72_start=4019;end=4153;strand=1;rf=2). 350s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 350s Performing BLAST search for sequence number 73 (orf_73_start=4355;end=4483;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 74 (orf_74_start=4667;end=4786;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 75 (orf_75_start=4838;end=5032;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 76 (orf_76_start=5033;end=5149;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 77 (orf_77_start=5630;end=5779;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 78 (orf_78_start=5819;end=5959;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 79 (orf_79_start=6356;end=6442;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 80 (orf_80_start=6521;end=6916;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 81 (orf_81_start=7049;end=7249;strand=1;rf=2). 351s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 351s Performing BLAST search for sequence number 82 (orf_82_start=7277;end=7357;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 83 (orf_83_start=7385;end=7465;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 84 (orf_84_start=7511;end=7594;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 85 (orf_85_start=7616;end=7873;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 86 (orf_86_start=7949;end=8047;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 87 (orf_87_start=8063;end=8158;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 88 (orf_88_start=8345;end=8419;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 89 (orf_89_start=8432;end=8515;strand=1;rf=2). 352s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 352s Performing BLAST search for sequence number 90 (orf_90_start=8528;end=8638;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 91 (orf_91_start=8639;end=8737;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 92 (orf_92_start=8786;end=8887;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Writing HSP to file. 353s Performing BLAST search for sequence number 93 (orf_93_start=8948;end=9070;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Writing HSP to file. 353s Performing BLAST search for sequence number 94 (orf_94_start=9302;end=9424;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 95 (orf_95_start=9470;end=9565;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 96 (orf_96_start=9626;end=9775;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 97 (orf_97_start=10262;end=10465;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 98 (orf_98_start=10601;end=10762;strand=1;rf=2). 353s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 353s Performing BLAST search for sequence number 99 (orf_99_start=10769;end=10966;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 100 (orf_100_start=11321;end=11398;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 101 (orf_101_start=11576;end=11848;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 102 (orf_102_start=11870;end=12028;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 103 (orf_103_start=12173;end=12304;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 104 (orf_104_start=12515;end=12595;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 105 (orf_105_start=12818;end=12904;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 106 (orf_106_start=13628;end=13864;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 107 (orf_107_start=13919;end=14032;strand=1;rf=2). 354s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 354s Performing BLAST search for sequence number 108 (orf_108_start=14132;end=14380;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 109 (orf_109_start=14555;end=14767;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 110 (orf_110_start=14786;end=14998;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 111 (orf_111_start=15110;end=15253;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 112 (orf_112_start=15284;end=15457;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 113 (orf_113_start=15473;end=15553;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 114 (orf_114_start=15572;end=15676;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 115 (orf_115_start=15731;end=15838;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 116 (orf_116_start=15905;end=15991;strand=1;rf=2). 355s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 355s Performing BLAST search for sequence number 117 (orf_117_start=450;end=548;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 118 (orf_118_start=771;end=893;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Writing HSP to file. 356s Performing BLAST search for sequence number 119 (orf_119_start=981;end=1142;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 120 (orf_120_start=1359;end=1622;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 121 (orf_121_start=1722;end=1817;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 122 (orf_122_start=1926;end=2006;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 123 (orf_123_start=2283;end=2369;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 124 (orf_124_start=2466;end=2546;strand=1;rf=3). 356s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 356s Performing BLAST search for sequence number 125 (orf_125_start=2553;end=2666;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 126 (orf_126_start=3054;end=3203;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 127 (orf_127_start=3279;end=3428;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 128 (orf_128_start=3537;end=3659;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 129 (orf_129_start=3840;end=3923;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 130 (orf_130_start=4485;end=4562;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 131 (orf_131_start=4590;end=4727;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 132 (orf_132_start=4851;end=4961;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 133 (orf_133_start=5121;end=5501;strand=1;rf=3). 357s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 357s Performing BLAST search for sequence number 134 (orf_134_start=5538;end=5633;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 135 (orf_135_start=5634;end=5888;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 136 (orf_136_start=6072;end=6185;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 137 (orf_137_start=6207;end=6347;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 138 (orf_138_start=6450;end=6524;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 139 (orf_139_start=6753;end=6848;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 140 (orf_140_start=7128;end=7235;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 141 (orf_141_start=7311;end=7394;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 142 (orf_142_start=7473;end=7679;strand=1;rf=3). 358s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 358s Performing BLAST search for sequence number 143 (orf_143_start=7983;end=8066;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 144 (orf_144_start=8388;end=8495;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 145 (orf_145_start=8556;end=8789;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Writing HSP to file. 359s Performing BLAST search for sequence number 146 (orf_146_start=9093;end=9167;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 147 (orf_147_start=9180;end=9305;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 148 (orf_148_start=9366;end=9473;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 149 (orf_149_start=9498;end=9662;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 359s Performing BLAST search for sequence number 150 (orf_150_start=9663;end=9821;strand=1;rf=3). 359s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 151 (orf_151_start=9936;end=10025;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 152 (orf_152_start=10284;end=10385;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 153 (orf_153_start=10416;end=10574;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 154 (orf_154_start=10581;end=10697;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Writing HSP to file. 360s Performing BLAST search for sequence number 155 (orf_155_start=10962;end=11159;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 156 (orf_156_start=11286;end=11450;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 157 (orf_157_start=11550;end=11681;strand=1;rf=3). 360s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 360s Performing BLAST search for sequence number 158 (orf_158_start=11709;end=11891;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 159 (orf_159_start=12123;end=12203;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 160 (orf_160_start=12288;end=12365;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 161 (orf_161_start=12465;end=12554;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Writing HSP to file. 361s Performing BLAST search for sequence number 162 (orf_162_start=12558;end=12866;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 163 (orf_163_start=12885;end=12959;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 164 (orf_164_start=13104;end=13247;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 165 (orf_165_start=13254;end=13370;strand=1;rf=3). 361s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 361s Performing BLAST search for sequence number 166 (orf_166_start=13887;end=13997;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 167 (orf_167_start=14103;end=14198;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 168 (orf_168_start=14226;end=14336;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 169 (orf_169_start=14631;end=14717;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 170 (orf_170_start=14895;end=15074;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 171 (orf_171_start=15129;end=15215;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 172 (orf_172_start=15429;end=15506;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 173 (orf_173_start=15600;end=15695;strand=1;rf=3). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 174 (orf_174_start=15590;end=15679;strand=-1;rf=1). 362s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 362s Performing BLAST search for sequence number 175 (orf_175_start=15356;end=15448;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 176 (orf_176_start=14987;end=15082;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 177 (orf_177_start=14399;end=14575;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 178 (orf_178_start=14195;end=14329;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 179 (orf_179_start=14027;end=14104;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 180 (orf_180_start=13835;end=14017;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 181 (orf_181_start=13736;end=13822;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 182 (orf_182_start=13475;end=13666;strand=-1;rf=1). 363s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 363s Performing BLAST search for sequence number 183 (orf_183_start=13244;end=13375;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 184 (orf_184_start=13100;end=13198;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 185 (orf_185_start=12686;end=12982;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 186 (orf_186_start=12473;end=12550;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 187 (orf_187_start=12305;end=12382;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 188 (orf_188_start=11951;end=12025;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 189 (orf_189_start=11636;end=11755;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 190 (orf_190_start=11525;end=11632;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 191 (orf_191_start=11156;end=11350;strand=-1;rf=1). 364s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 364s Performing BLAST search for sequence number 192 (orf_192_start=10841;end=11092;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 193 (orf_193_start=10694;end=10822;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 194 (orf_194_start=10604;end=10681;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 195 (orf_195_start=10439;end=10597;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 196 (orf_196_start=9461;end=9550;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 197 (orf_197_start=9278;end=9439;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 198 (orf_198_start=9164;end=9262;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 199 (orf_199_start=8708;end=8830;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Writing HSP to file. 365s Performing BLAST search for sequence number 200 (orf_200_start=8459;end=8620;strand=-1;rf=1). 365s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 365s Performing BLAST search for sequence number 201 (orf_201_start=7979;end=8242;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 202 (orf_202_start=7784;end=7879;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 203 (orf_203_start=7595;end=7675;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 204 (orf_204_start=7232;end=7318;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 205 (orf_205_start=7055;end=7135;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 206 (orf_206_start=6935;end=7048;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 207 (orf_207_start=6398;end=6547;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 208 (orf_208_start=6173;end=6322;strand=-1;rf=1). 366s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 366s Performing BLAST search for sequence number 209 (orf_209_start=5867;end=5947;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 210 (orf_210_start=5555;end=5758;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 211 (orf_211_start=5195;end=5539;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 212 (orf_212_start=5018;end=5188;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Writing HSP to file. 367s Performing BLAST search for sequence number 213 (orf_213_start=4835;end=5005;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 214 (orf_214_start=4139;end=4228;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 215 (orf_215_start=3416;end=3529;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 216 (orf_216_start=3254;end=3394;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 217 (orf_217_start=3077;end=3151;strand=-1;rf=1). 367s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 367s Performing BLAST search for sequence number 218 (orf_218_start=2753;end=2848;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 219 (orf_219_start=2366;end=2473;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 220 (orf_220_start=2207;end=2290;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 221 (orf_221_start=1922;end=2128;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 222 (orf_222_start=1535;end=1618;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 223 (orf_223_start=1106;end=1213;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 224 (orf_224_start=812;end=1045;strand=-1;rf=1). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Writing HSP to file. 368s Performing BLAST search for sequence number 225 (orf_225_start=15673;end=15855;strand=-1;rf=2). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 368s Performing BLAST search for sequence number 226 (orf_226_start=15445;end=15549;strand=-1;rf=2). 368s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 227 (orf_227_start=15250;end=15381;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 228 (orf_228_start=14842;end=15213;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 229 (orf_229_start=14536;end=14799;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 230 (orf_230_start=14254;end=14364;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 231 (orf_231_start=13921;end=14112;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 232 (orf_232_start=13618;end=13869;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 233 (orf_233_start=13459;end=13545;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 234 (orf_234_start=13255;end=13455;strand=-1;rf=2). 369s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 369s Performing BLAST search for sequence number 235 (orf_235_start=13165;end=13242;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 236 (orf_236_start=12442;end=12588;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 237 (orf_237_start=12133;end=12378;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 238 (orf_238_start=12025;end=12105;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 239 (orf_239_start=11629;end=11958;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 240 (orf_240_start=11434;end=11595;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 241 (orf_241_start=11170;end=11244;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 242 (orf_242_start=11053;end=11136;strand=-1;rf=2). 370s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 370s Performing BLAST search for sequence number 243 (orf_243_start=10759;end=10881;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 244 (orf_244_start=10618;end=10740;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 245 (orf_245_start=10243;end=10356;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 246 (orf_246_start=9961;end=10050;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 247 (orf_247_start=9655;end=9732;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 248 (orf_248_start=9490;end=9642;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Performing BLAST search for sequence number 249 (orf_249_start=9340;end=9489;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 371s Writing HSP to file. 371s Performing BLAST search for sequence number 250 (orf_250_start=6061;end=9060;strand=-1;rf=2). 371s Writing HSP to file. 371s Performing BLAST search for sequence number 251 (orf_251_start=5962;end=6039;strand=-1;rf=2). 371s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 252 (orf_252_start=5704;end=5925;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 253 (orf_253_start=4951;end=5124;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 254 (orf_254_start=4819;end=4926;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 255 (orf_255_start=4618;end=4794;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 256 (orf_256_start=4351;end=4473;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 257 (orf_257_start=4174;end=4263;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 258 (orf_258_start=3781;end=3930;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 259 (orf_259_start=3508;end=3702;strand=-1;rf=2). 372s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 372s Performing BLAST search for sequence number 260 (orf_260_start=3430;end=3507;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 261 (orf_261_start=3265;end=3387;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 262 (orf_262_start=2788;end=2871;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 263 (orf_263_start=2539;end=2625;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 264 (orf_264_start=2218;end=2298;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 265 (orf_265_start=2047;end=2166;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 266 (orf_266_start=1894;end=2037;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 267 (orf_267_start=1636;end=1746;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 373s Performing BLAST search for sequence number 268 (orf_268_start=1420;end=1557;strand=-1;rf=2). 373s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 269 (orf_269_start=1174;end=1350;strand=-1;rf=2). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 270 (orf_270_start=913;end=1074;strand=-1;rf=2). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 271 (orf_271_start=370;end=573;strand=-1;rf=2). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Writing HSP to file. 374s Performing BLAST search for sequence number 272 (orf_272_start=202;end=357;strand=-1;rf=2). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 273 (orf_273_start=1;end=93;strand=-1;rf=2). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 274 (orf_274_start=15696;end=15899;strand=-1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 275 (orf_275_start=15348;end=15470;strand=-1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 276 (orf_276_start=15150;end=15329;strand=-1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 374s Performing BLAST search for sequence number 277 (orf_277_start=14451;end=14558;strand=-1;rf=3). 374s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 278 (orf_278_start=14085;end=14213;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 279 (orf_279_start=13533;end=13622;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 280 (orf_280_start=13452;end=13526;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 281 (orf_281_start=13050;end=13181;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 282 (orf_282_start=12861;end=12965;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 283 (orf_283_start=12657;end=12785;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 284 (orf_284_start=12534;end=12623;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 285 (orf_285_start=12375;end=12494;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 375s Performing BLAST search for sequence number 286 (orf_286_start=12234;end=12311;strand=-1;rf=3). 375s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 287 (orf_287_start=12030;end=12113;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 288 (orf_288_start=11703;end=11810;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 289 (orf_289_start=11439;end=11570;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Writing HSP to file. 376s Performing BLAST search for sequence number 290 (orf_290_start=11325;end=11420;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 291 (orf_291_start=11178;end=11297;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 292 (orf_292_start=11043;end=11138;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 293 (orf_293_start=10674;end=10763;strand=-1;rf=3). 376s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 376s Performing BLAST search for sequence number 294 (orf_294_start=10329;end=10607;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 295 (orf_295_start=10146;end=10229;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 296 (orf_296_start=9675;end=9887;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 297 (orf_297_start=9483;end=9605;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 298 (orf_298_start=9399;end=9476;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 299 (orf_299_start=8955;end=9221;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Writing HSP to file. 377s Performing BLAST search for sequence number 300 (orf_300_start=8847;end=8954;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Writing HSP to file. 377s Performing BLAST search for sequence number 301 (orf_301_start=8112;end=8195;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 302 (orf_302_start=8019;end=8099;strand=-1;rf=3). 377s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 377s Performing BLAST search for sequence number 303 (orf_303_start=7851;end=7943;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 304 (orf_304_start=7602;end=7682;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 305 (orf_305_start=7512;end=7598;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Writing HSP to file. 378s Performing BLAST search for sequence number 306 (orf_306_start=7422;end=7508;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 307 (orf_307_start=7236;end=7406;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 308 (orf_308_start=6939;end=7037;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 309 (orf_309_start=6822;end=6914;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 310 (orf_310_start=6615;end=6770;strand=-1;rf=3). 378s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 378s Performing BLAST search for sequence number 311 (orf_311_start=6168;end=6311;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Writing HSP to file. 379s Performing BLAST search for sequence number 312 (orf_312_start=5889;end=5978;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 313 (orf_313_start=5520;end=5756;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 314 (orf_314_start=5256;end=5351;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 315 (orf_315_start=5043;end=5198;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 316 (orf_316_start=4665;end=4787;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 317 (orf_317_start=4554;end=4649;strand=-1;rf=3). 379s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 379s Performing BLAST search for sequence number 318 (orf_318_start=4419;end=4553;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 319 (orf_319_start=4188;end=4412;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 320 (orf_320_start=3738;end=3830;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 321 (orf_321_start=3546;end=3638;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 322 (orf_322_start=3159;end=3245;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 323 (orf_323_start=2685;end=3080;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 324 (orf_324_start=2352;end=2552;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 325 (orf_325_start=2244;end=2324;strand=-1;rf=3). 380s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 380s Performing BLAST search for sequence number 326 (orf_326_start=2136;end=2216;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 327 (orf_327_start=2007;end=2090;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 328 (orf_328_start=1728;end=1985;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 329 (orf_329_start=1554;end=1652;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 330 (orf_330_start=1443;end=1538;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 331 (orf_331_start=1182;end=1256;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 332 (orf_332_start=1086;end=1169;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 333 (orf_333_start=963;end=1073;strand=-1;rf=3). 381s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 381s Performing BLAST search for sequence number 334 (orf_334_start=864;end=962;strand=-1;rf=3). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 335 (orf_335_start=714;end=815;strand=-1;rf=3). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Writing HSP to file. 382s Performing BLAST search for sequence number 336 (orf_336_start=387;end=653;strand=-1;rf=3). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Writing HSP to file. 382s Performing BLAST search for sequence number 337 (orf_337_start=279;end=356;strand=-1;rf=3). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Performing BLAST search for sequence number 338 (orf_338_start=66;end=185;strand=-1;rf=3). 382s Warning: [tblastn] The parameter -num_descriptions is ignored for output formats > 4 . Use -max_target_seqs to control output 382s Open /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn to view the BLAST results. 382s [Saturday July 27 01:34:36 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local. 382s [Saturday July 27 01:34:36 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_tblastn/reference_genome. 382s [Saturday July 27 01:34:36 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_tblastn/features. 382s [Saturday July 27 01:34:36 2024] [Notice] Creating CGView XML files. 382s [Saturday July 27 01:34:36 2024] [Notice] The following BLAST results will be drawn, from outside to center: 382s [Saturday July 27 01:34:36 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn 382s [Saturday July 27 01:34:36 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn 382s [Saturday July 27 01:34:36 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn 382s [Saturday July 27 01:34:36 2024] [Notice] two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn 383s Creating XML for feature sets on the outside of the backbone circle. 383s Feature sets written first are drawn closest to the backbone circle. 383s Creating XML for ORFs that are in reading frame +1. 383s Creating XML for ORFs that are in reading frame +2. 383s Creating XML for ORFs that are in reading frame +3. 383s Creating XML for feature sets on the inside of the backbone circle. 383s Feature sets written first are drawn closest to the backbone circle. 383s Creating XML for ORFs that are in reading frame -1. 383s Creating XML for ORFs that are in reading frame -2. 383s Creating XML for ORFs that are in reading frame -3. 383s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf.fasta_split_DNA_tblastn. 383s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_end_of_orf_rev_comp.fasta_split_DNA_tblastn. 383s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf.fasta_split_DNA_tblastn. 383s Creating XML for BLAST hits from the BLAST file /var/tmp/cct/test_output/test_tblastn/blast/blast_results_local/two_copies_of_long_ORF_opposite_directions_ORFS_vs_match_start_of_orf_rev_comp.fasta_split_DNA_tblastn. 383s Creating XML for GC content information. 383s Plotting GC content using a window size of 500 and a step of 1. 383s The maximum GC content value is 0.5768. 383s The minimum GC content value is 0.4311. 383s The average GC content value is 0.5051. 383s GC content will be scaled based on the maximum and minimum values. 383s GC content will be plotted as the deviation from the average value. 383s Creating XML for GC skew information. 383s Plotting GC skew using a window size of 500 and a step of 1. 383s The maximum GC skew value is 0.1587. 383s The minimum GC skew value is -0.2263. 383s The average GC skew value is -0.0036. 383s GC skew will be scaled based on the maximum and minimum values. 383s GC skew will be plotted as the deviation from the average value. 383s CGView XML file complete. 383s The recommended CGView command is: 383s ---------------------------------- 383s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml/test_tblastn_project_settings.conf_medium.xml -o map.png 383s Success! 383s The following key-values were used: 383s ----------------------------------- 383s arrowheadLength=6 383s average=T 383s atColorNeg=rgb(51,51,51) 383s atColorPos=rgb(51,51,51) 383s at_content=F 383s atSkewColorNeg=rgb(0,0,153) 383s atSkewColorPos=rgb(153,153,0) 383s at_skew=F 383s backboneColor=rgb(102,102,102) 383s backboneRadius=1000 383s backboneThickness=8 383s backgroundColor=white 383s blast_divider_ruler=F 383s blastRulerColor=rgb(255,165,0) 383s borderColor=black 383s combined_orfs=F 383s details=T 383s draw_divider_rings=T 383s featureOpacity=0.5 383s featureOpacityOther=0.5 383s featureSlotSpacing=6 383s featureThickness=9.86 383s featureThicknessPlot=59.14 383s feature_labels=F 383s gcColorNeg=rgb(0,0,0) 383s gcColorPos=rgb(0,0,0) 383s gc_content=T 383s gcSkewColorNeg=rgb(153,0,153) 383s gcSkewColorPos=rgb(0,153,0) 383s gc_skew=T 383s gene_decoration=arrow 383s gene_labels=F 383s global_label=true 383s height=3000 383s hit_labels=F 383s labelFontSize=15 383s labelPlacementQuality=good 383s labelLineLength=200 383s labelLineThickness=4 383s legend=T 383s legendFontSize=20 383s orf_labels=F 383s maxLabelLength=20 383s maxLegendLength=30 383s maxTitleLength=50 383s minimumFeatureLength=0.2 383s moveInnerLabelsToOuter=false 383s orfColor=rgb(204,0,0) 383s orfs=T 383s orf_size=25 383s otherColor=rgb(51,51,51) 383s parse_reading_frame=T 383s proteinColor=rgb(0,0,153) 383s reading_frames=F 383s rRNAColor=rgb(153,0,153) 383s rulerFontColor=rgb(0,0,0) 383s rulerFontSize=30 383s rulerPadding=40 383s scale=T 383s scale_blast=T 383s show_sequence_features=T 383s show_queries=T 383s startColor=rgb(153,0,153) 383s starts=ttg|ctg|att|atc|ata|atg|gtg 383s step=1 383s stopColor=rgb(204,0,0) 383s stops=taa|tag|tga 383s title= 383s titleFontSize=80 383s tickColor=rgb(0,51,0) 383s tickLength=15 383s tickThickness=6 383s tick_density=0.166666666666667 383s tRNAColor=rgb(153,0,0) 383s useInnerLabels=true 383s use_opacity=F 383s width=3000 383s window=500 383s ----------------------------------- 383s [Saturday July 27 01:34:37 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_tblastn/maps/cgview_xml. 383s [Saturday July 27 01:34:37 2024] [Notice] Creating CGView maps. 383s Parsing XML input. 385s Drawing features.................................................................. 385s Positioning and drawing 0 labels.......................... 385s 0 labels were removed. 385s Drawing tick marks. 385s Drawing legends. 385s The map has been drawn. 385s Writing picture to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.png 386s Writing HTML to /var/tmp/cct/test_output/test_tblastn/maps/test_tblastn_project_settings.html 386s [Saturday July 27 01:34:40 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_tblastn/maps. 386s Processing project 'test_orfs' 386s Processing project 'test_orfs' using configuration 'project_settings.conf' 386s [Saturday July 27 01:34:40 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_orfs/project_settings.conf. 386s [Saturday July 27 01:34:40 2024] [Notice] Creating CGView XML files. 386s Creating XML for feature sets on the outside of the backbone circle. 386s Feature sets written first are drawn closest to the backbone circle. 386s Creating XML for ORFs that are in reading frame +1. 386s Creating XML for ORFs that are in reading frame +2. 386s Creating XML for ORFs that are in reading frame +3. 386s Creating XML for feature sets on the inside of the backbone circle. 386s Feature sets written first are drawn closest to the backbone circle. 386s Creating XML for ORFs that are in reading frame -1. 386s Creating XML for ORFs that are in reading frame -2. 386s Creating XML for ORFs that are in reading frame -3. 386s CGView XML file complete. 386s The recommended CGView command is: 386s ---------------------------------- 386s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_orfs/maps/cgview_xml/test_orfs_project_settings.conf_medium.xml -o map.png 386s Success! 386s The following key-values were used: 386s ----------------------------------- 386s arrowheadLength=6 386s average=T 386s atColorNeg=rgb(51,51,51) 386s atColorPos=rgb(51,51,51) 386s at_content=F 386s atSkewColorNeg=rgb(0,0,153) 386s atSkewColorPos=rgb(153,153,0) 386s at_skew=F 386s backboneColor=rgb(102,102,102) 386s backboneRadius=1000 386s backboneThickness=8 386s backgroundColor=white 386s blast_divider_ruler=F 386s blastRulerColor=rgb(255,165,0) 386s borderColor=black 386s combined_orfs=F 386s details=T 386s draw_divider_rings=T 386s featureOpacity=0.5 386s featureOpacityOther=0.5 386s featureSlotSpacing=6 386s featureThickness=30 386s featureThicknessPlot=570.00 386s feature_labels=F 386s gcColorNeg=rgb(0,0,0) 386s gcColorPos=rgb(0,0,0) 386s gc_content=F 386s gcSkewColorNeg=rgb(153,0,153) 386s gcSkewColorPos=rgb(0,153,0) 386s gc_skew=F 386s gene_decoration=arrow 386s gene_labels=F 386s global_label=true 386s height=3000 386s hit_labels=F 386s labelFontSize=15 386s labelPlacementQuality=good 386s labelLineLength=200 386s labelLineThickness=4 386s legend=T 386s legendFontSize=20 386s orf_labels=T 386s maxLabelLength=20 386s maxLegendLength=30 386s maxTitleLength=50 386s minimumFeatureLength=0.2 386s moveInnerLabelsToOuter=false 386s orfColor=rgb(204,0,0) 386s orfs=T 386s orf_size=19 386s otherColor=rgb(51,51,51) 386s parse_reading_frame=F 386s proteinColor=rgb(0,0,153) 386s reading_frames=F 386s rRNAColor=rgb(153,0,153) 386s rulerFontColor=rgb(0,0,0) 386s rulerFontSize=30 386s rulerPadding=40 386s scale=T 386s scale_blast=T 386s show_sequence_features=T 386s show_queries=F 386s startColor=rgb(153,0,153) 386s starts=atg 386s step=1 386s stopColor=rgb(204,0,0) 386s stops=taa|tag|tga 386s title= 386s titleFontSize=80 386s tickColor=rgb(0,51,0) 386s tickLength=15 386s tickThickness=6 386s tick_density=0.166666666666667 386s tRNAColor=rgb(153,0,0) 386s useInnerLabels=true 386s use_opacity=F 386s width=3000 386s window=50 386s ----------------------------------- 386s [Saturday July 27 01:34:40 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_orfs/maps/cgview_xml. 386s [Saturday July 27 01:34:40 2024] [Notice] Creating CGView maps. 386s Parsing XML input. 386s Drawing features.............. 387s Positioning and drawing 41 labels.......................... 387s 0 labels were removed. 387s Drawing tick marks. 387s Drawing legends. 387s The map has been drawn. 387s Writing picture to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.png 387s Writing HTML to /var/tmp/cct/test_output/test_orfs/maps/test_orfs_project_settings.html 387s [Saturday July 27 01:34:41 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_orfs/maps. 387s Processing project 'test_blastx' 387s Processing project 'test_blastx' using configuration 'project_settings.conf' 387s [Saturday July 27 01:34:41 2024] [Notice] Using the settings file /var/tmp/cct/test_output/test_blastx/project_settings.conf. 387s [Saturday July 27 01:34:41 2024] [Notice] Splitting the reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome for BLAST searches. 387s [Saturday July 27 01:34:41 2024] [Notice] Reference genome sequence has been split and written to /var/tmp/cct/test_output/test_blastx/reference_genome/split. 387s [Saturday July 27 01:34:41 2024] [Notice] Copying protein sequences in /var/tmp/cct/test_output/test_blastx/comparison_genomes for BLAST searches. 387s [Saturday July 27 01:34:41 2024] [Notice] Protein sequences have been copied to /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins. 387s [Saturday July 27 01:34:41 2024] [Notice] Creating BLAST databases using the files in /var/tmp/cct/test_output/test_blastx/comparison_genomes/proteins. 387s [Saturday July 27 01:34:41 2024] [Notice] The BLAST databases have been created in /var/tmp/cct/test_output/test_blastx/blast/blast_db. 387s [Saturday July 27 01:34:41 2024] [Notice] Performing BLAST comparisons between sequences in /var/tmp/cct/test_output/test_blastx/reference_genome/split and databases in /var/tmp/cct/test_output/test_blastx/blast/blast_db. 387s [Saturday July 27 01:34:41 2024] [Notice] The BLAST results have been written to /var/tmp/cct/test_output/test_blastx/blast/blast_results_local. 387s [Saturday July 27 01:34:41 2024] [Notice] Assigning COG categories to CDS translations from reference genome sequence in /var/tmp/cct/test_output/test_blastx/reference_genome. 387s [Saturday July 27 01:34:41 2024] [Notice] COG categories have been written to /var/tmp/cct/test_output/test_blastx/features. 387s [Saturday July 27 01:34:41 2024] [Notice] Creating CGView XML files. 388s Creating XML for feature sets on the outside of the backbone circle. 388s Feature sets written first are drawn closest to the backbone circle. 388s Creating XML for ORFs that are in reading frame +1. 388s Creating XML for ORFs that are in reading frame +2. 388s Creating XML for ORFs that are in reading frame +3. 388s Creating XML for feature sets on the inside of the backbone circle. 388s Feature sets written first are drawn closest to the backbone circle. 388s Creating XML for ORFs that are in reading frame -1. 388s Creating XML for ORFs that are in reading frame -2. 388s Creating XML for ORFs that are in reading frame -3. 388s Creating XML for GC content information. 388s Plotting GC content using a window size of 500 and a step of 1. 388s The maximum GC content value is 0.5768. 388s The minimum GC content value is 0.4311. 388s The average GC content value is 0.5051. 388s GC content will be scaled based on the maximum and minimum values. 388s GC content will be plotted as the deviation from the average value. 388s Creating XML for GC skew information. 388s Plotting GC skew using a window size of 500 and a step of 1. 388s The maximum GC skew value is 0.1587. 388s The minimum GC skew value is -0.2263. 388s The average GC skew value is -0.0036. 388s GC skew will be scaled based on the maximum and minimum values. 388s GC skew will be plotted as the deviation from the average value. 388s CGView XML file complete. 388s The recommended CGView command is: 388s ---------------------------------- 388s java -jar -Xmx1500m cgview.jar -i /var/tmp/cct/test_output/test_blastx/maps/cgview_xml/test_blastx_project_settings.conf_medium.xml -o map.png 388s Success! 388s The following key-values were used: 388s ----------------------------------- 388s arrowheadLength=6 388s average=T 388s atColorNeg=rgb(51,51,51) 388s atColorPos=rgb(51,51,51) 388s at_content=F 388s atSkewColorNeg=rgb(0,0,153) 388s atSkewColorPos=rgb(153,153,0) 388s at_skew=F 388s backboneColor=rgb(102,102,102) 388s backboneRadius=1000 388s backboneThickness=8 388s backgroundColor=white 388s blast_divider_ruler=F 388s blastRulerColor=rgb(255,165,0) 388s borderColor=black 388s combined_orfs=F 388s details=T 388s draw_divider_rings=T 388s featureOpacity=0.5 388s featureOpacityOther=0.5 388s featureSlotSpacing=6 388s featureThickness=30 388s featureThicknessPlot=186.00 388s feature_labels=F 388s gcColorNeg=rgb(0,0,0) 388s gcColorPos=rgb(0,0,0) 388s gc_content=T 388s gcSkewColorNeg=rgb(153,0,153) 388s gcSkewColorPos=rgb(0,153,0) 388s gc_skew=T 388s gene_decoration=arrow 388s gene_labels=F 388s global_label=true 388s height=3000 388s hit_labels=F 388s labelFontSize=15 388s labelPlacementQuality=good 388s labelLineLength=200 388s labelLineThickness=4 388s legend=T 388s legendFontSize=20 388s orf_labels=F 388s maxLabelLength=20 388s maxLegendLength=30 388s maxTitleLength=50 388s minimumFeatureLength=0.2 388s moveInnerLabelsToOuter=false 388s orfColor=rgb(204,0,0) 388s orfs=T 388s orf_size=25 388s otherColor=rgb(51,51,51) 388s parse_reading_frame=T 388s proteinColor=rgb(0,0,153) 388s reading_frames=F 388s rRNAColor=rgb(153,0,153) 388s rulerFontColor=rgb(0,0,0) 388s rulerFontSize=30 388s rulerPadding=40 388s scale=T 388s scale_blast=T 388s show_sequence_features=T 388s show_queries=T 388s startColor=rgb(153,0,153) 388s starts=ttg|ctg|att|atc|ata|atg|gtg 388s step=1 388s stopColor=rgb(204,0,0) 388s stops=taa|tag|tga 388s title= 388s titleFontSize=80 388s tickColor=rgb(0,51,0) 388s tickLength=15 388s tickThickness=6 388s tick_density=0.166666666666667 388s tRNAColor=rgb(153,0,0) 388s useInnerLabels=true 388s use_opacity=F 388s width=3000 388s window=500 388s ----------------------------------- 388s [Saturday July 27 01:34:42 2024] [Notice] CGView XML files have been created in /var/tmp/cct/test_output/test_blastx/maps/cgview_xml. 388s [Saturday July 27 01:34:42 2024] [Notice] Creating CGView maps. 388s Parsing XML input. 390s Drawing features.................. 390s Positioning and drawing 0 labels.......................... 390s 0 labels were removed. 390s Drawing tick marks. 390s Drawing legends. 390s The map has been drawn. 390s Writing picture to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.png 391s Writing HTML to /var/tmp/cct/test_output/test_blastx/maps/test_blastx_project_settings.html 391s [Saturday July 27 01:34:45 2024] [Notice] CGView maps have been created in /var/tmp/cct/test_output/test_blastx/maps. 391s Test project output written to '/var/tmp/cct/test_output' 391s autopkgtest [01:34:45]: test run-unit-test: -----------------------] 391s autopkgtest [01:34:45]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 391s run-unit-test PASS 391s autopkgtest [01:34:45]: @@@@@@@@@@@@@@@@@@@@ summary 391s run-unit-test PASS 401s nova [W] Skipping flock for amd64 401s Creating nova instance adt-oracular-i386-cct-20240727-012814-juju-7f2275-prod-proposed-migration-environment-2-fbc40e1f-dfc2-4bc1-88b7-4ff952457dc6 from image adt/ubuntu-oracular-amd64-server-20240726.img (UUID 6c5f29e9-79d7-45b1-9721-03e2205f6a0e)...