0s autopkgtest [08:30:28]: starting date and time: 2024-05-24 08:30:28+0000 0s autopkgtest [08:30:28]: git checkout: d60bd36 autopkgtest-build-lxd: Add missing remote prefix in get_boot_id(). 0s autopkgtest [08:30:28]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6vqpzbfc/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-cran-stars --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/3.5.1+dfsg-1 -- lxd -r lxd-armhf-10.145.243.224 lxd-armhf-10.145.243.224:autopkgtest/ubuntu/oracular/armhf 27s autopkgtest [08:30:55]: testbed dpkg architecture: armhf 29s autopkgtest [08:30:57]: testbed apt version: 2.7.14build2 29s autopkgtest [08:30:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [73.9 kB] 38s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3388 B] 38s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [1964 B] 38s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [53.5 kB] 38s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [497 kB] 38s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [112 kB] 38s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [432 kB] 38s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1968 B] 38s Fetched 1176 kB in 1s (1388 kB/s) 38s Reading package lists... 57s tee: /proc/self/fd/2: Permission denied 78s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 78s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 78s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 78s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 79s Reading package lists... 79s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Calculating upgrade... 81s The following package was automatically installed and is no longer required: 81s libatm1t64 81s Use 'apt autoremove' to remove it. 81s The following packages will be upgraded: 81s apt apt-utils bash-completion curl dhcpcd-base dpkg dpkg-dev dracut-install 81s fwupd gcc-14-base gir1.2-girepository-2.0 gir1.2-glib-2.0 groff-base 81s initramfs-tools initramfs-tools-bin initramfs-tools-core iproute2 81s klibc-utils libapt-pkg6.0t64 libbsd0 libc-bin libc6 libcurl3t64-gnutls 81s libcurl4t64 libdpkg-perl libevent-core-2.1-7t64 libfwupd2 libgcc-s1 81s libgcrypt20 libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libklibc 81s liblocale-gettext-perl liblz4-1 libperl5.38t64 libsqlite3-0 libstdc++6 81s libuv1t64 libxcb1 locales man-db perl perl-base perl-modules-5.38 81s python-apt-common python3-apt python3-jinja2 python3-pyparsing python3-six 81s python3-typing-extensions rsync tzdata vim-common vim-tiny xxd 81s 56 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 81s Need to get 37.3 MB of archives. 81s After this operation, 545 kB of additional disk space will be used. 81s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-14-base armhf 14.1.0-1ubuntu1 [48.4 kB] 81s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-s1 armhf 14.1.0-1ubuntu1 [41.5 kB] 81s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++6 armhf 14.1.0-1ubuntu1 [714 kB] 82s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf libc6 armhf 2.39-0ubuntu8.1 [2828 kB] 82s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf libgcrypt20 armhf 1.10.3-3 [454 kB] 82s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf liblz4-1 armhf 1.9.4-2 [58.0 kB] 82s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf libapt-pkg6.0t64 armhf 2.9.3 [1013 kB] 82s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf dpkg armhf 1.22.6ubuntu10 [1230 kB] 83s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf libperl5.38t64 armhf 5.38.2-4 [4102 kB] 83s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf perl armhf 5.38.2-4 [231 kB] 83s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf perl-base armhf 5.38.2-4 [1671 kB] 83s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf perl-modules-5.38 all 5.38.2-4 [3110 kB] 83s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf libc-bin armhf 2.39-0ubuntu8.1 [530 kB] 83s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf apt armhf 2.9.3 [1397 kB] 84s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf apt-utils armhf 2.9.3 [217 kB] 84s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf liblocale-gettext-perl armhf 1.07-7 [14.8 kB] 84s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf rsync armhf 3.3.0-1 [414 kB] 84s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf dhcpcd-base armhf 1:10.0.6-5 [186 kB] 84s Get:19 http://ftpmaster.internal/ubuntu oracular/main armhf gir1.2-girepository-2.0 armhf 1.80.1-3 [24.7 kB] 84s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf gir1.2-glib-2.0 armhf 2.80.2-1ubuntu1 [182 kB] 84s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf libglib2.0-0t64 armhf 2.80.2-1ubuntu1 [1421 kB] 84s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf libgirepository-1.0-1 armhf 1.80.1-3 [107 kB] 84s Get:23 http://ftpmaster.internal/ubuntu oracular/main armhf iproute2 armhf 6.9.0-1 [1083 kB] 84s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libbsd0 armhf 0.12.2-1 [36.5 kB] 84s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf libglib2.0-data all 2.80.2-1ubuntu1 [49.3 kB] 84s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf libsqlite3-0 armhf 3.45.3-1 [601 kB] 84s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf locales all 2.39-0ubuntu8.1 [4234 kB] 84s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf python-apt-common all 2.9.0 [20.1 kB] 84s Get:29 http://ftpmaster.internal/ubuntu oracular/main armhf python3-apt armhf 2.9.0 [162 kB] 84s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf tzdata all 2024a-4ubuntu1 [274 kB] 84s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf vim-tiny armhf 2:9.1.0377-1ubuntu1 [670 kB] 84s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf vim-common all 2:9.1.0377-1ubuntu1 [385 kB] 84s Get:33 http://ftpmaster.internal/ubuntu oracular/main armhf xxd armhf 2:9.1.0377-1ubuntu1 [63.0 kB] 84s Get:34 http://ftpmaster.internal/ubuntu oracular/main armhf bash-completion all 1:2.14.0-1 [206 kB] 84s Get:35 http://ftpmaster.internal/ubuntu oracular/main armhf groff-base armhf 1.23.0-4 [946 kB] 84s Get:36 http://ftpmaster.internal/ubuntu oracular/main armhf libuv1t64 armhf 1.48.0-4 [83.2 kB] 84s Get:37 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb1 armhf 1.17.0-2 [46.3 kB] 84s Get:38 http://ftpmaster.internal/ubuntu oracular/main armhf man-db armhf 2.12.1-1 [1201 kB] 84s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf curl armhf 8.5.0-2ubuntu10.1 [219 kB] 84s Get:40 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl4t64 armhf 8.5.0-2ubuntu10.1 [296 kB] 84s Get:41 http://ftpmaster.internal/ubuntu oracular/main armhf dpkg-dev all 1.22.6ubuntu10 [1074 kB] 84s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf libdpkg-perl all 1.22.6ubuntu10 [269 kB] 84s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf dracut-install armhf 060+5-8ubuntu1 [34.3 kB] 84s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl3t64-gnutls armhf 8.5.0-2ubuntu10.1 [290 kB] 84s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf libfwupd2 armhf 1.9.20-1 [126 kB] 84s Get:46 http://ftpmaster.internal/ubuntu oracular/main armhf fwupd armhf 1.9.20-1 [4368 kB] 84s Get:47 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools all 0.142ubuntu27 [7898 B] 84s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools-core all 0.142ubuntu27 [49.5 kB] 84s Get:49 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools-bin armhf 0.142ubuntu27 [20.9 kB] 84s Get:50 http://ftpmaster.internal/ubuntu oracular/main armhf klibc-utils armhf 2.0.13-4ubuntu1 [93.8 kB] 84s Get:51 http://ftpmaster.internal/ubuntu oracular/main armhf libklibc armhf 2.0.13-4ubuntu1 [45.0 kB] 84s Get:52 http://ftpmaster.internal/ubuntu oracular/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-10 [82.5 kB] 84s Get:53 http://ftpmaster.internal/ubuntu oracular/main armhf python3-jinja2 all 3.1.3-1 [107 kB] 84s Get:54 http://ftpmaster.internal/ubuntu oracular/main armhf python3-pyparsing all 3.1.2-1 [86.4 kB] 84s Get:55 http://ftpmaster.internal/ubuntu oracular/main armhf python3-six all 1.16.0-6 [13.0 kB] 85s Get:56 http://ftpmaster.internal/ubuntu oracular/main armhf python3-typing-extensions all 4.11.0-1 [61.5 kB] 85s Preconfiguring packages ... 85s Fetched 37.3 MB in 4s (10.5 MB/s) 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 85s Preparing to unpack .../gcc-14-base_14.1.0-1ubuntu1_armhf.deb ... 85s Unpacking gcc-14-base:armhf (14.1.0-1ubuntu1) over (14-20240412-0ubuntu1) ... 85s Setting up gcc-14-base:armhf (14.1.0-1ubuntu1) ... 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 85s Preparing to unpack .../libgcc-s1_14.1.0-1ubuntu1_armhf.deb ... 85s Unpacking libgcc-s1:armhf (14.1.0-1ubuntu1) over (14-20240412-0ubuntu1) ... 85s Setting up libgcc-s1:armhf (14.1.0-1ubuntu1) ... 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 86s Preparing to unpack .../libstdc++6_14.1.0-1ubuntu1_armhf.deb ... 86s Unpacking libstdc++6:armhf (14.1.0-1ubuntu1) over (14-20240412-0ubuntu1) ... 86s Setting up libstdc++6:armhf (14.1.0-1ubuntu1) ... 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 86s Preparing to unpack .../libc6_2.39-0ubuntu8.1_armhf.deb ... 86s Unpacking libc6:armhf (2.39-0ubuntu8.1) over (2.39-0ubuntu8) ... 86s Setting up libc6:armhf (2.39-0ubuntu8.1) ... 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 86s Preparing to unpack .../libgcrypt20_1.10.3-3_armhf.deb ... 86s Unpacking libgcrypt20:armhf (1.10.3-3) over (1.10.3-2build1) ... 86s Setting up libgcrypt20:armhf (1.10.3-3) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 87s Preparing to unpack .../liblz4-1_1.9.4-2_armhf.deb ... 87s Unpacking liblz4-1:armhf (1.9.4-2) over (1.9.4-1build1) ... 87s Setting up liblz4-1:armhf (1.9.4-2) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 87s Preparing to unpack .../libapt-pkg6.0t64_2.9.3_armhf.deb ... 87s Unpacking libapt-pkg6.0t64:armhf (2.9.3) over (2.7.14build2) ... 87s Setting up libapt-pkg6.0t64:armhf (2.9.3) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 87s Preparing to unpack .../dpkg_1.22.6ubuntu10_armhf.deb ... 87s Unpacking dpkg (1.22.6ubuntu10) over (1.22.6ubuntu6) ... 87s Setting up dpkg (1.22.6ubuntu10) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 87s Preparing to unpack .../libperl5.38t64_5.38.2-4_armhf.deb ... 87s Unpacking libperl5.38t64:armhf (5.38.2-4) over (5.38.2-3.2build2) ... 88s Preparing to unpack .../perl_5.38.2-4_armhf.deb ... 88s Unpacking perl (5.38.2-4) over (5.38.2-3.2build2) ... 88s Preparing to unpack .../perl-base_5.38.2-4_armhf.deb ... 88s Unpacking perl-base (5.38.2-4) over (5.38.2-3.2build2) ... 88s Setting up perl-base (5.38.2-4) ... 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 88s Preparing to unpack .../perl-modules-5.38_5.38.2-4_all.deb ... 88s Unpacking perl-modules-5.38 (5.38.2-4) over (5.38.2-3.2build2) ... 89s Preparing to unpack .../libc-bin_2.39-0ubuntu8.1_armhf.deb ... 89s Unpacking libc-bin (2.39-0ubuntu8.1) over (2.39-0ubuntu8) ... 89s Setting up libc-bin (2.39-0ubuntu8.1) ... 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 89s Preparing to unpack .../archives/apt_2.9.3_armhf.deb ... 89s Unpacking apt (2.9.3) over (2.7.14build2) ... 89s Setting up apt (2.9.3) ... 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58166 files and directories currently installed.) 90s Preparing to unpack .../00-apt-utils_2.9.3_armhf.deb ... 90s Unpacking apt-utils (2.9.3) over (2.7.14build2) ... 90s Preparing to unpack .../01-liblocale-gettext-perl_1.07-7_armhf.deb ... 90s Unpacking liblocale-gettext-perl (1.07-7) over (1.07-6ubuntu5) ... 90s Preparing to unpack .../02-rsync_3.3.0-1_armhf.deb ... 90s Unpacking rsync (3.3.0-1) over (3.2.7-1ubuntu1) ... 90s Preparing to unpack .../03-dhcpcd-base_1%3a10.0.6-5_armhf.deb ... 90s Unpacking dhcpcd-base (1:10.0.6-5) over (1:10.0.6-4) ... 90s Preparing to unpack .../04-gir1.2-girepository-2.0_1.80.1-3_armhf.deb ... 90s Unpacking gir1.2-girepository-2.0:armhf (1.80.1-3) over (1.80.1-1) ... 90s Preparing to unpack .../05-gir1.2-glib-2.0_2.80.2-1ubuntu1_armhf.deb ... 90s Unpacking gir1.2-glib-2.0:armhf (2.80.2-1ubuntu1) over (2.80.1-0ubuntu2) ... 90s Preparing to unpack .../06-libglib2.0-0t64_2.80.2-1ubuntu1_armhf.deb ... 90s Unpacking libglib2.0-0t64:armhf (2.80.2-1ubuntu1) over (2.80.1-0ubuntu2) ... 90s Preparing to unpack .../07-libgirepository-1.0-1_1.80.1-3_armhf.deb ... 90s Unpacking libgirepository-1.0-1:armhf (1.80.1-3) over (1.80.1-1) ... 90s Preparing to unpack .../08-iproute2_6.9.0-1_armhf.deb ... 91s Unpacking iproute2 (6.9.0-1) over (6.1.0-1ubuntu6) ... 91s dpkg: warning: unable to delete old directory '/etc/iproute2/rt_tables.d': Directory not empty 91s dpkg: warning: unable to delete old directory '/etc/iproute2/rt_protos.d': Directory not empty 91s dpkg: warning: unable to delete old directory '/etc/iproute2': Directory not empty 91s Preparing to unpack .../09-libbsd0_0.12.2-1_armhf.deb ... 91s Unpacking libbsd0:armhf (0.12.2-1) over (0.12.1-1build1) ... 91s Preparing to unpack .../10-libglib2.0-data_2.80.2-1ubuntu1_all.deb ... 91s Unpacking libglib2.0-data (2.80.2-1ubuntu1) over (2.80.1-0ubuntu2) ... 91s Preparing to unpack .../11-libsqlite3-0_3.45.3-1_armhf.deb ... 91s Unpacking libsqlite3-0:armhf (3.45.3-1) over (3.45.1-1ubuntu2) ... 91s Preparing to unpack .../12-locales_2.39-0ubuntu8.1_all.deb ... 91s Unpacking locales (2.39-0ubuntu8.1) over (2.39-0ubuntu8) ... 91s Preparing to unpack .../13-python-apt-common_2.9.0_all.deb ... 91s Unpacking python-apt-common (2.9.0) over (2.7.7ubuntu1) ... 91s Preparing to unpack .../14-python3-apt_2.9.0_armhf.deb ... 91s Unpacking python3-apt (2.9.0) over (2.7.7ubuntu1) ... 91s Preparing to unpack .../15-tzdata_2024a-4ubuntu1_all.deb ... 91s Unpacking tzdata (2024a-4ubuntu1) over (2024a-2ubuntu1) ... 92s Preparing to unpack .../16-vim-tiny_2%3a9.1.0377-1ubuntu1_armhf.deb ... 92s Unpacking vim-tiny (2:9.1.0377-1ubuntu1) over (2:9.1.0016-1ubuntu7) ... 92s Preparing to unpack .../17-vim-common_2%3a9.1.0377-1ubuntu1_all.deb ... 92s Unpacking vim-common (2:9.1.0377-1ubuntu1) over (2:9.1.0016-1ubuntu7) ... 92s Preparing to unpack .../18-xxd_2%3a9.1.0377-1ubuntu1_armhf.deb ... 92s Unpacking xxd (2:9.1.0377-1ubuntu1) over (2:9.1.0016-1ubuntu7) ... 92s Preparing to unpack .../19-bash-completion_1%3a2.14.0-1_all.deb ... 92s Unpacking bash-completion (1:2.14.0-1) over (1:2.11-8) ... 92s Preparing to unpack .../20-groff-base_1.23.0-4_armhf.deb ... 92s Unpacking groff-base (1.23.0-4) over (1.23.0-3build2) ... 92s Preparing to unpack .../21-libuv1t64_1.48.0-4_armhf.deb ... 92s Unpacking libuv1t64:armhf (1.48.0-4) over (1.48.0-1.1build1) ... 92s Preparing to unpack .../22-libxcb1_1.17.0-2_armhf.deb ... 92s Unpacking libxcb1:armhf 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94s Removing obsolete conffile /etc/iproute2/rt_scopes ... 94s Removing obsolete conffile /etc/iproute2/rt_tables ... 94s Removing obsolete conffile /etc/iproute2/rt_tables.d/README ... 94s Removing obsolete conffile /etc/iproute2/rt_protos.d/README ... 94s Removing obsolete conffile /etc/iproute2/rt_protos ... 94s Removing obsolete conffile /etc/iproute2/rt_dsfield ... 94s Removing obsolete conffile /etc/iproute2/nl_protos ... 94s Removing obsolete conffile /etc/iproute2/ematch_map ... 94s Removing obsolete conffile /etc/iproute2/bpf_pinning ... 94s Setting up libsqlite3-0:armhf (3.45.3-1) ... 94s Setting up libuv1t64:armhf (1.48.0-4) ... 94s Setting up libcurl3t64-gnutls:armhf (8.5.0-2ubuntu10.1) ... 94s Setting up locales (2.39-0ubuntu8.1) ... 95s Generating locales (this might take a while)... 99s en_US.UTF-8... done 99s Generation complete. 99s Setting up xxd (2:9.1.0377-1ubuntu1) ... 99s Setting up tzdata (2024a-4ubuntu1) ... 99s 99s Current default time zone: 'Etc/UTC' 99s Local time is now: Fri May 24 08:32:07 UTC 2024. 99s Universal Time is now: Fri May 24 08:32:07 UTC 2024. 99s Run 'dpkg-reconfigure tzdata' if you wish to change it. 99s 99s Setting up python3-six (1.16.0-6) ... 99s Setting up libklibc:armhf (2.0.13-4ubuntu1) ... 99s Setting up python3-jinja2 (3.1.3-1) ... 99s Setting up libglib2.0-0t64:armhf (2.80.2-1ubuntu1) ... 99s No schema files found: doing nothing. 99s Setting up libglib2.0-data (2.80.2-1ubuntu1) ... 99s Setting up vim-common (2:9.1.0377-1ubuntu1) ... 99s Setting up python3-pyparsing (3.1.2-1) ... 99s Setting up bash-completion (1:2.14.0-1) ... 99s Installing new version of config file /etc/profile.d/bash_completion.sh ... 99s Setting up perl-modules-5.38 (5.38.2-4) ... 99s Setting up dhcpcd-base (1:10.0.6-5) ... 99s Setting up python3-typing-extensions (4.11.0-1) ... 100s Setting up gir1.2-glib-2.0:armhf (2.80.2-1ubuntu1) ... 100s Setting up python-apt-common (2.9.0) ... 100s Setting up dracut-install (060+5-8ubuntu1) ... 100s Setting up groff-base (1.23.0-4) ... 100s Setting up libgirepository-1.0-1:armhf (1.80.1-3) ... 100s Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-10) ... 100s Setting up curl (8.5.0-2ubuntu10.1) ... 100s Setting up libperl5.38t64:armhf (5.38.2-4) ... 100s Setting up klibc-utils (2.0.13-4ubuntu1) ... 100s Setting up libbsd0:armhf (0.12.2-1) ... 100s Setting up liblocale-gettext-perl (1.07-7) ... 100s Setting up rsync (3.3.0-1) ... 100s rsync.service is a disabled or a static unit not running, not starting it. 100s Setting up initramfs-tools-bin (0.142ubuntu27) ... 100s Setting up python3-apt (2.9.0) ... 101s Setting up libfwupd2:armhf (1.9.20-1) ... 101s Setting up vim-tiny (2:9.1.0377-1ubuntu1) ... 101s Setting up man-db (2.12.1-1) ... 101s Updating database of manual pages ... 102s apparmor_parser: Unable to replace "/usr/bin/man". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 102s 102s man-db.service is a disabled or a static unit not running, not starting it. 102s Setting up perl (5.38.2-4) ... 102s Setting up gir1.2-girepository-2.0:armhf (1.80.1-3) ... 102s Setting up libdpkg-perl (1.22.6ubuntu10) ... 102s Setting up initramfs-tools-core (0.142ubuntu27) ... 102s Setting up fwupd (1.9.20-1) ... 103s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 103s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 103s fwupd.service is a disabled or a static unit not running, not starting it. 103s Setting up initramfs-tools (0.142ubuntu27) ... 103s update-initramfs: deferring update (trigger activated) 103s Setting up dpkg-dev (1.22.6ubuntu10) ... 103s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 103s Processing triggers for dbus (1.14.10-4ubuntu4) ... 103s Processing triggers for initramfs-tools (0.142ubuntu27) ... 104s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s The following packages will be REMOVED: 105s libatm1t64* 106s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 106s After this operation, 94.2 kB disk space will be freed. 106s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58348 files and directories currently installed.) 106s Removing libatm1t64:armhf (1:2.5.1-5.1build1) ... 106s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 108s autopkgtest [08:32:16]: rebooting testbed after setup commands that affected boot 149s autopkgtest [08:32:57]: testbed running kernel: Linux 5.15.0-107-generic #117-Ubuntu SMP Mon Apr 29 14:37:09 UTC 2024 177s autopkgtest [08:33:25]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-stars 188s Get:1 http://ftpmaster.internal/ubuntu oracular/universe r-cran-stars 0.6-4-1 (dsc) [2749 B] 188s Get:2 http://ftpmaster.internal/ubuntu oracular/universe r-cran-stars 0.6-4-1 (tar) [3714 kB] 188s Get:3 http://ftpmaster.internal/ubuntu oracular/universe r-cran-stars 0.6-4-1 (diff) [4316 B] 188s gpgv: Signature made Tue Oct 17 13:19:14 2023 UTC 188s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 188s gpgv: issuer "tille@debian.org" 188s gpgv: Can't check signature: No public key 188s dpkg-source: warning: cannot verify inline signature for ./r-cran-stars_0.6-4-1.dsc: no acceptable signature found 188s autopkgtest [08:33:36]: testing package r-cran-stars version 0.6-4-1 190s autopkgtest [08:33:38]: build not needed 194s autopkgtest [08:33:42]: test run-unit-test: preparing testbed 204s Reading package lists... 205s Building dependency tree... 205s Reading state information... 205s Starting pkgProblemResolver with broken count: 0 205s Starting 2 pkgProblemResolver with broken count: 0 205s Done 206s The following additional packages will be installed: 206s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 206s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax gdal-data 206s gdal-plugins javascript-common libaec0 libaom3 libarmadillo12 libarpack2t64 206s libblas3 libblosc1 libcairo2 libcfitsio10t64 libdatrie1 libde265-0 206s libdeflate0 libfontconfig1 libfreetype6 libfreexl1 libfyba0t64 libgdal34t64 206s libgeos-c1t64 libgeos3.12.1t64 libgeotiff5 libgfortran5 libgif7 libgomp1 206s libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 206s libhdf5-hl-100t64 libheif-plugin-aomdec libheif-plugin-libde265 libheif1 206s libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 206s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 206s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 206s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 206s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 206s libkmlbase1t64 libkmldom1t64 libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 206s libltdl7 liblua5.4-0 libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 206s libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 206s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpoppler134 206s libpq5 libproj25 libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 206s libspatialite8t64 libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 206s libtiff6 libtk8.6 libudunits2-0 libudunits2-data liburiparser1 libwebp7 206s libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 206s libxt6t64 littler mysql-common node-bootstrap-sass node-html5shiv 206s node-normalize.css pandoc pandoc-data proj-data r-base-core r-cran-abind 206s r-cran-areal r-cran-askpass r-cran-base64enc r-cran-bdsmatrix r-cran-brio 206s r-cran-bslib r-cran-cachem r-cran-cairo r-cran-callr r-cran-class 206s r-cran-classint r-cran-cli r-cran-clue r-cran-cluster r-cran-codetools 206s r-cran-collapse r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 206s r-cran-crayon r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir 206s r-cran-desc r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 206s r-cran-evaluate r-cran-exactextractr r-cran-fansi r-cran-farver 206s r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula r-cran-fs 206s r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 206s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 206s r-cran-gridextra r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools 206s r-cran-httpuv r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib 206s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later 206s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-listenv 206s r-cran-littler r-cran-lmtest r-cran-lwgeom r-cran-magrittr r-cran-mapdata 206s r-cran-maps r-cran-mass r-cran-matrix r-cran-maxlik r-cran-memoise 206s r-cran-mgcv r-cran-mime r-cran-misctools r-cran-munsell r-cran-ncdfgeom 206s r-cran-ncmeta r-cran-nlme r-cran-openssl r-cran-parallelly r-cran-pbapply 206s r-cran-pcict r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 206s r-cran-pkgload r-cran-plm r-cran-polyclip r-cran-praise r-cran-processx 206s r-cran-promises r-cran-proxy r-cran-ps r-cran-purrr r-cran-r6 206s r-cran-randomforest r-cran-rappdirs r-cran-raster r-cran-rbibutils 206s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rdpack 206s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rmarkdown r-cran-rnetcdf 206s r-cran-rpart r-cran-rprojroot r-cran-s2 r-cran-sandwich r-cran-sass 206s r-cran-scales r-cran-sf r-cran-sftime r-cran-shiny r-cran-sourcetools 206s r-cran-sp r-cran-spacetime r-cran-spatstat r-cran-spatstat.data 206s r-cran-spatstat.explore r-cran-spatstat.geom r-cran-spatstat.linnet 206s r-cran-spatstat.model r-cran-spatstat.random r-cran-spatstat.sparse 206s r-cran-spatstat.utils r-cran-stars r-cran-stringi r-cran-stringr 206s r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor r-cran-terra 206s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 206s r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs r-cran-viridis 206s r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk r-cran-xfun 206s r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common unzip 206s x11-common xdg-utils zip 206s Suggested packages: 206s apache2 | lighttpd | httpd geotiff-bin gdal-bin libgeotiff-epsg 206s libhdf4-alt-dev hdf4-tools libheif-plugin-x265 libheif-plugin-ffmpegdec 206s libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec 206s libheif-plugin-j2kenc libheif-plugin-rav1e libheif-plugin-svtenc 206s libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc 206s liblcms2-utils odbc-postgresql tdsodbc ogdi-bin proj-bin tcl8.6 tk8.6 nodejs 206s texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc 206s texlive-latex-extra context wkhtmltopdf librsvg2-bin groff ghc php python 206s ruby libjs-katex citation-style-language-styles elpa-ess r-doc-info 206s | r-doc-pdf r-mathlib r-base-html r-cran-png r-cran-lpsolve r-cran-quadprog 206s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg 206s r-cran-rstudioapi r-cran-rmysql r-cran-sessioninfo r-cran-reshape2 206s r-cran-magick r-cran-getopt r-cran-mapproj r-cran-tinytest r-cran-bit64 206s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-vdiffr 206s r-cran-roxygen2 r-cran-inline r-cran-hmisc r-cran-rvest r-cran-spelling 206s r-cran-bench r-cran-blob r-cran-here r-cran-hms 206s Recommended packages: 206s proj-bin libheif-plugin-aomenc node-jquery poppler-data r-recommended 206s r-base-dev r-doc-html r-cran-thematic r-cran-mockery r-cran-spelling 206s r-cran-spdata r-cran-tinytest r-cran-htmlwidgets r-cran-rstudioapi 206s r-cran-whoami r-cran-data.table r-cran-rcpparmadillo r-cran-xml2 r-cran-dt 206s r-cran-bench r-cran-decor r-cran-lobstr r-cran-progress r-cran-webutils 206s r-cran-gh r-cran-broom r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql 206s r-cran-rsqlite r-cran-foreign r-cran-ncdf4 r-cran-unitizer r-cran-rsvg 206s r-cran-rhpcblasctl r-cran-r.rsp r-cran-markdown r-cran-hexbin r-cran-hmisc 206s r-cran-mapproj r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg 206s r-cran-svglite r-cran-vdiffr r-cran-lintr r-cran-pander r-cran-fields 206s r-cran-testit r-cran-jpeg r-cran-png r-cran-readr r-cran-formatr 206s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 206s r-cran-webshot node-highlight.js r-cran-tidyverse r-cran-r.utils 206s r-cran-geosphere r-cran-runit r-cran-pkgdown r-cran-zip r-cran-sodium 206s r-cran-lubridate r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-remotes 206s r-cran-aer r-cran-car r-cran-spdep r-cran-statmod r-cran-urca 206s r-cran-bookdown r-cran-webfakes r-cran-cba r-cran-pingr r-cran-igraph 206s r-cran-gbrd r-cran-usethis r-cran-dygraphs r-cran-rsconnect r-cran-downlit 206s r-cran-bit64 r-cran-dichromat r-cran-hms r-cran-blob r-cran-nanoarrow 206s r-cran-googlevis r-cran-isocodes r-cran-sm r-cran-gsl r-cran-locfit 206s r-cran-spatial r-cran-nleqslv r-cran-glmnet r-cran-xml r-cran-formattable 206s r-cran-zeallot r-cran-renv r-cran-timeseries r-cran-timedate r-cran-tseries 206s r-cran-chron libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 206s x11-utils x11-xserver-utils 206s The following NEW packages will be installed: 206s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 206s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings 206s fonts-mathjax gdal-data gdal-plugins javascript-common libaec0 libaom3 206s libarmadillo12 libarpack2t64 libblas3 libblosc1 libcairo2 libcfitsio10t64 206s libdatrie1 libde265-0 libdeflate0 libfontconfig1 libfreetype6 libfreexl1 206s libfyba0t64 libgdal34t64 libgeos-c1t64 libgeos3.12.1t64 libgeotiff5 206s libgfortran5 libgif7 libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt 206s libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec 206s libheif-plugin-libde265 libheif1 libice6 libjbig0 libjpeg-turbo8 libjpeg8 206s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 206s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 206s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 206s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 206s libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64 206s libkmlengine1t64 liblapack3 liblcms2-2 liblerc4 libltdl7 liblua5.4-0 206s libminizip1t64 libmysqlclient21 libnetcdf19t64 libodbc2 libodbcinst2 206s libogdi4.1 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 206s libpaper-utils libpaper1 libpixman-1-0 libpoppler134 libpq5 libproj25 206s libqhull-r8.0 librttopo1 libsharpyuv0 libsm6 libsnappy1v5 libspatialite8t64 206s libsuperlu6 libsz2 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 206s libudunits2-0 libudunits2-data liburiparser1 libwebp7 libxcb-render0 206s libxcb-shm0 libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 littler 206s mysql-common node-bootstrap-sass node-html5shiv node-normalize.css pandoc 206s pandoc-data proj-data r-base-core r-cran-abind r-cran-areal r-cran-askpass 206s r-cran-base64enc r-cran-bdsmatrix r-cran-brio r-cran-bslib r-cran-cachem 206s r-cran-cairo r-cran-callr r-cran-class r-cran-classint r-cran-cli 206s r-cran-clue r-cran-cluster r-cran-codetools r-cran-collapse 206s r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 206s r-cran-cubelyr r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc 206s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate 206s r-cran-exactextractr r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fnn 206s r-cran-fontawesome r-cran-formula r-cran-fs r-cran-future 206s r-cran-future.apply r-cran-generics r-cran-ggforce r-cran-ggplot2 206s r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest r-cran-gridextra 206s r-cran-gstat r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv 206s r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib r-cran-jsonlite 206s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 206s r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lmtest 206s r-cran-lwgeom r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-mass 206s r-cran-matrix r-cran-maxlik r-cran-memoise r-cran-mgcv r-cran-mime 206s r-cran-misctools r-cran-munsell r-cran-ncdfgeom r-cran-ncmeta r-cran-nlme 206s r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict r-cran-pillar 206s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plm 206s r-cran-polyclip r-cran-praise r-cran-processx r-cran-promises r-cran-proxy 206s r-cran-ps r-cran-purrr r-cran-r6 r-cran-randomforest r-cran-rappdirs 206s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 206s r-cran-rcppeigen r-cran-rdpack r-cran-rematch2 r-cran-rex r-cran-rlang 206s r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot r-cran-s2 206s r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-sftime 206s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 206s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 206s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 206s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi 206s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 206s r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 206s r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs 206s r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk 206s r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo unixodbc-common 206s unzip x11-common xdg-utils zip 206s 0 upgraded, 288 newly installed, 0 to remove and 0 not upgraded. 206s Need to get 282 MB/282 MB of archives. 206s After this operation, 717 MB of additional disk space will be used. 206s Get:1 /tmp/autopkgtest.4JdhGU/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [944 B] 206s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libfreetype6 armhf 2.13.2+dfsg-1build3 [331 kB] 207s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 207s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 207s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] 207s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] 207s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf fontconfig armhf 2.15.0-1.1ubuntu2 [189 kB] 207s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 207s Get:9 http://ftpmaster.internal/ubuntu oracular/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 207s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 207s Get:11 http://ftpmaster.internal/ubuntu oracular/universe armhf gdal-data all 3.8.5+dfsg-1 [261 kB] 207s Get:12 http://ftpmaster.internal/ubuntu oracular/universe armhf gdal-plugins armhf 3.8.5+dfsg-1 [24.6 kB] 207s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf javascript-common all 11+nmu1 [5936 B] 207s Get:14 http://ftpmaster.internal/ubuntu oracular/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 207s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf libaom3 armhf 3.8.2-2build1 [1681 kB] 207s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 207s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran5 armhf 14.1.0-1ubuntu1 [311 kB] 207s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 207s Get:19 http://ftpmaster.internal/ubuntu oracular/universe armhf libarpack2t64 armhf 3.9.1-1.1build2 [88.4 kB] 207s Get:20 http://ftpmaster.internal/ubuntu oracular/universe armhf libsuperlu6 armhf 6.0.1+dfsg1-1build1 [155 kB] 207s Get:21 http://ftpmaster.internal/ubuntu oracular/universe armhf libarmadillo12 armhf 1:12.8.2+dfsg-1 [102 kB] 207s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf libsnappy1v5 armhf 1.2.1-1 [28.4 kB] 207s Get:23 http://ftpmaster.internal/ubuntu oracular/universe armhf libblosc1 armhf 1.21.5+ds-1build1 [23.7 kB] 207s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libpixman-1-0 armhf 0.42.2-1build1 [193 kB] 207s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 207s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 207s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 207s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf libcairo2 armhf 1.18.0-3build1 [482 kB] 207s Get:29 http://ftpmaster.internal/ubuntu oracular/universe armhf libcfitsio10t64 armhf 4.3.1-1.1build2 [504 kB] 207s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 207s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf libde265-0 armhf 1.0.15-1build3 [158 kB] 207s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf libdeflate0 armhf 1.20-1 [38.3 kB] 207s Get:33 http://ftpmaster.internal/ubuntu oracular/universe armhf libfyba0t64 armhf 4.1.1-11build1 [109 kB] 207s Get:34 http://ftpmaster.internal/ubuntu oracular/universe armhf libminizip1t64 armhf 1:1.3.dfsg-3.1ubuntu2 [19.9 kB] 207s Get:35 http://ftpmaster.internal/ubuntu oracular/universe armhf libfreexl1 armhf 2.0.0-1build2 [37.6 kB] 207s Get:36 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeos3.12.1t64 armhf 3.12.1-3build1 [867 kB] 207s Get:37 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeos-c1t64 armhf 3.12.1-3build1 [92.8 kB] 207s Get:38 http://ftpmaster.internal/ubuntu oracular/universe armhf proj-data all 9.4.0-1build2 [7885 kB] 208s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 208s Get:40 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] 208s Get:41 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 208s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB] 208s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB] 208s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB] 208s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu2 [178 kB] 208s Get:46 http://ftpmaster.internal/ubuntu oracular/universe armhf libproj25 armhf 9.4.0-1build2 [1281 kB] 208s Get:47 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeotiff5 armhf 1.7.1-5build1 [52.1 kB] 208s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf libgif7 armhf 5.2.2-1ubuntu1 [32.6 kB] 208s Get:49 http://ftpmaster.internal/ubuntu oracular/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 208s Get:50 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf4-0-alt armhf 4.3.0-1 [253 kB] 208s Get:51 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-103-1t64 armhf 1.10.10+repack-3.1ubuntu4 [1337 kB] 208s Get:52 http://ftpmaster.internal/ubuntu oracular/main armhf libheif-plugin-aomdec armhf 1.17.6-1ubuntu4 [9862 B] 208s Get:53 http://ftpmaster.internal/ubuntu oracular/main armhf libheif-plugin-libde265 armhf 1.17.6-1ubuntu4 [10.3 kB] 208s Get:54 http://ftpmaster.internal/ubuntu oracular/main armhf libheif1 armhf 1.17.6-1ubuntu4 [267 kB] 208s Get:55 http://ftpmaster.internal/ubuntu oracular/universe armhf liburiparser1 armhf 0.9.7+dfsg-2build1 [29.9 kB] 208s Get:56 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmlbase1t64 armhf 1.3.0-12build1 [45.0 kB] 208s Get:57 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmldom1t64 armhf 1.3.0-12build1 [145 kB] 208s Get:58 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmlengine1t64 armhf 1.3.0-12build1 [69.6 kB] 208s Get:59 http://ftpmaster.internal/ubuntu oracular/main armhf mysql-common all 5.8+1.1.0build1 [6746 B] 208s Get:60 http://ftpmaster.internal/ubuntu oracular/main armhf libmysqlclient21 armhf 8.0.37-1 [1265 kB] 208s Get:61 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-hl-100t64 armhf 1.10.10+repack-3.1ubuntu4 [54.8 kB] 208s Get:62 http://ftpmaster.internal/ubuntu oracular/universe armhf libnetcdf19t64 armhf 1:4.9.2-5ubuntu4 [422 kB] 208s Get:63 http://ftpmaster.internal/ubuntu oracular/main armhf libltdl7 armhf 2.4.7-7build1 [37.6 kB] 208s Get:64 http://ftpmaster.internal/ubuntu oracular/main armhf libodbc2 armhf 2.3.12-1build2 [144 kB] 208s Get:65 http://ftpmaster.internal/ubuntu oracular/main armhf unixodbc-common all 2.3.12-1build2 [8646 B] 208s Get:66 http://ftpmaster.internal/ubuntu oracular/main armhf libodbcinst2 armhf 2.3.12-1build2 [30.4 kB] 208s Get:67 http://ftpmaster.internal/ubuntu oracular/universe armhf libogdi4.1 armhf 4.1.1+ds-4 [185 kB] 208s Get:68 http://ftpmaster.internal/ubuntu oracular/main armhf libopenjp2-7 armhf 2.5.0-2build3 [160 kB] 208s Get:69 http://ftpmaster.internal/ubuntu oracular/main armhf liblcms2-2 armhf 2.14-2build1 [132 kB] 208s Get:70 http://ftpmaster.internal/ubuntu oracular/main armhf libpoppler134 armhf 24.02.0-1ubuntu9 [968 kB] 208s Get:71 http://ftpmaster.internal/ubuntu oracular/main armhf libpq5 armhf 16.2-1ubuntu4 [122 kB] 208s Get:72 http://ftpmaster.internal/ubuntu oracular/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 208s Get:73 http://ftpmaster.internal/ubuntu oracular/universe armhf librttopo1 armhf 1.1.0-3build2 [160 kB] 208s Get:74 http://ftpmaster.internal/ubuntu oracular/universe armhf libspatialite8t64 armhf 5.1.0-3build1 [2019 kB] 208s Get:75 http://ftpmaster.internal/ubuntu oracular/universe armhf libxerces-c3.2t64 armhf 3.2.4+debian-1.3 [817 kB] 208s Get:76 http://ftpmaster.internal/ubuntu oracular/universe armhf libgdal34t64 armhf 3.8.5+dfsg-1 [7869 kB] 208s Get:77 http://ftpmaster.internal/ubuntu oracular/main armhf libgomp1 armhf 14.1.0-1ubuntu1 [125 kB] 208s Get:78 http://ftpmaster.internal/ubuntu oracular/main armhf libgraphite2-3 armhf 1.3.14-2build1 [64.6 kB] 208s Get:79 http://ftpmaster.internal/ubuntu oracular/main armhf libharfbuzz0b armhf 8.3.0-2build2 [446 kB] 208s Get:80 http://ftpmaster.internal/ubuntu oracular/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 208s Get:81 http://ftpmaster.internal/ubuntu oracular/main armhf libice6 armhf 2:1.0.10-1build3 [35.4 kB] 208s Get:82 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 208s Get:83 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 208s Get:84 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 208s Get:85 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-d3 all 3.5.17-4 [132 kB] 208s Get:86 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] 209s Get:87 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 209s Get:88 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 209s Get:89 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 209s Get:90 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 209s Get:91 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 209s Get:92 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 209s Get:93 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 209s Get:94 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 209s Get:95 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 209s Get:96 http://ftpmaster.internal/ubuntu oracular/main armhf liblua5.4-0 armhf 5.4.6-3build2 [133 kB] 209s Get:97 http://ftpmaster.internal/ubuntu oracular/main armhf libthai-data all 0.1.29-2build1 [158 kB] 209s Get:98 http://ftpmaster.internal/ubuntu oracular/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 209s Get:99 http://ftpmaster.internal/ubuntu oracular/main armhf libpango-1.0-0 armhf 1.52.2+ds-1 [209 kB] 209s Get:100 http://ftpmaster.internal/ubuntu oracular/main armhf libpangoft2-1.0-0 armhf 1.52.2+ds-1 [36.4 kB] 209s Get:101 http://ftpmaster.internal/ubuntu oracular/main armhf libpangocairo-1.0-0 armhf 1.52.2+ds-1 [24.9 kB] 209s Get:102 http://ftpmaster.internal/ubuntu oracular/main armhf libpaper1 armhf 1.1.29build1 [12.6 kB] 209s Get:103 http://ftpmaster.internal/ubuntu oracular/main armhf libpaper-utils armhf 1.1.29build1 [8184 B] 209s Get:104 http://ftpmaster.internal/ubuntu oracular/main armhf libsm6 armhf 2:1.2.3-1build3 [14.1 kB] 209s Get:105 http://ftpmaster.internal/ubuntu oracular/main armhf libtcl8.6 armhf 8.6.14+dfsg-1build1 [903 kB] 209s Get:106 http://ftpmaster.internal/ubuntu oracular/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 209s Get:107 http://ftpmaster.internal/ubuntu oracular/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 209s Get:108 http://ftpmaster.internal/ubuntu oracular/main armhf libtk8.6 armhf 8.6.14-1build1 [681 kB] 209s Get:109 http://ftpmaster.internal/ubuntu oracular/universe armhf libudunits2-data all 2.2.28-7build1 [19.4 kB] 209s Get:110 http://ftpmaster.internal/ubuntu oracular/universe armhf libudunits2-0 armhf 2.2.28-7build1 [47.1 kB] 209s Get:111 http://ftpmaster.internal/ubuntu oracular/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 209s Get:112 http://ftpmaster.internal/ubuntu oracular/main armhf zip armhf 3.0-13build1 [163 kB] 209s Get:113 http://ftpmaster.internal/ubuntu oracular/main armhf unzip armhf 6.0-28ubuntu4 [163 kB] 209s Get:114 http://ftpmaster.internal/ubuntu oracular/main armhf xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 209s Get:115 http://ftpmaster.internal/ubuntu oracular/universe armhf r-base-core armhf 4.4.0-2 [28.1 MB] 210s Get:116 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-littler armhf 0.3.20-1 [82.6 kB] 210s Get:117 http://ftpmaster.internal/ubuntu oracular/universe armhf littler all 0.3.20-1 [2486 B] 210s Get:118 http://ftpmaster.internal/ubuntu oracular/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] 210s Get:119 http://ftpmaster.internal/ubuntu oracular/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 210s Get:120 http://ftpmaster.internal/ubuntu oracular/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] 210s Get:121 http://ftpmaster.internal/ubuntu oracular/universe armhf pandoc-data all 3.1.3-2build2 [78.3 kB] 210s Get:122 http://ftpmaster.internal/ubuntu oracular/universe armhf pandoc armhf 3.1.3+ds-3build1 [31.9 MB] 211s Get:123 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-abind all 1.4-5-2 [63.6 kB] 211s Get:124 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cli armhf 3.6.2-1 [1363 kB] 211s Get:125 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-generics all 0.1.3-1 [81.3 kB] 211s Get:126 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-glue armhf 1.7.0-1 [153 kB] 211s Get:127 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rlang armhf 1.1.3-1 [1658 kB] 211s Get:128 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 211s Get:129 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] 211s Get:130 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fansi armhf 1.0.5-1 [611 kB] 211s Get:131 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-utf8 armhf 1.2.4-1 [136 kB] 211s Get:132 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-vctrs armhf 0.6.5-1 [1310 kB] 211s Get:133 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 211s Get:134 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-r6 all 2.5.1-1 [99.0 kB] 211s Get:135 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 211s Get:136 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tibble armhf 3.2.1+dfsg-2 [415 kB] 211s Get:137 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-withr all 2.5.0-1 [225 kB] 211s Get:138 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tidyselect armhf 1.2.0+dfsg-1 [218 kB] 211s Get:139 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-dplyr armhf 1.1.4-1 [1510 kB] 211s Get:140 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-purrr armhf 1.0.2-1 [499 kB] 211s Get:141 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mass armhf 7.3-60.0.1-1 [1118 kB] 211s Get:142 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-class armhf 7.3-22-2build1 [87.0 kB] 211s Get:143 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-proxy armhf 0.4-27-1 [180 kB] 211s Get:144 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-e1071 armhf 1.7-14-1 [551 kB] 211s Get:145 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-kernsmooth armhf 2.23-24-1 [91.1 kB] 211s Get:146 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-classint armhf 0.4-10+dfsg-1 [105 kB] 211s Get:147 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-dbi all 1.2.2-1 [823 kB] 211s Get:148 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 211s Get:149 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcpp armhf 1.0.12-1 [1968 kB] 211s Get:150 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-wk armhf 0.9.1-1 [1781 kB] 211s Get:151 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-s2 armhf 1.1.6-1build2 [1895 kB] 211s Get:152 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-units armhf 0.8-5+dfsg-1 [270 kB] 211s Get:153 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sf armhf 1.0-16+dfsg-1 [3038 kB] 211s Get:154 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 211s Get:155 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sys armhf 3.4.2-1 [43.7 kB] 211s Get:156 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-askpass armhf 1.2.0-1 [24.3 kB] 211s Get:157 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] 211s Get:158 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-bdsmatrix armhf 1.3-7-1 [298 kB] 211s Get:159 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-brio armhf 1.1.5-1 [37.9 kB] 211s Get:160 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fastmap armhf 1.1.1-1 [68.1 kB] 211s Get:161 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cachem armhf 1.0.8-1 [72.0 kB] 211s Get:162 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-digest armhf 0.6.35-1 [202 kB] 212s Get:163 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-htmltools armhf 0.5.8.1-1 [372 kB] 212s Get:164 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 212s Get:165 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-jsonlite armhf 1.8.8+dfsg-1 [438 kB] 212s Get:166 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] 212s Get:167 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mime armhf 0.12-2 [35.5 kB] 212s Get:168 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fs armhf 1.6.3+dfsg-1build2 [226 kB] 212s Get:169 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] 212s Get:170 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sass armhf 0.4.9+dfsg-1 [926 kB] 212s Get:171 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 212s Get:172 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cairo armhf 1.6-2-1 [83.8 kB] 212s Get:173 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ps armhf 1.7.6-1 [310 kB] 212s Get:174 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-processx armhf 3.8.3-1 [334 kB] 212s Get:175 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-callr all 3.7.6-1 [458 kB] 212s Get:176 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cluster armhf 2.1.6-1build1 [548 kB] 212s Get:177 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-clue armhf 0.3-65-1 [957 kB] 212s Get:178 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-codetools all 0.2-20-1 [90.5 kB] 212s Get:179 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-collapse armhf 2.0.13-1 [3067 kB] 212s Get:180 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-colorspace armhf 2.1-0+dfsg-1 [1538 kB] 212s Get:181 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-commonmark armhf 1.9.1-1 [110 kB] 212s Get:182 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lazyeval armhf 0.2.2-1build1 [142 kB] 212s Get:183 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rex all 1.2.1-1 [129 kB] 212s Get:184 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-curl armhf 5.2.0+dfsg-1build2 [175 kB] 212s Get:185 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-openssl armhf 2.1.1+dfsg-2build2 [398 kB] 212s Get:186 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-httr all 1.4.7+dfsg-1 [459 kB] 212s Get:187 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-crayon all 1.5.2-1 [164 kB] 212s Get:188 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-yaml armhf 2.3.8-2 [100 kB] 212s Get:189 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-covr armhf 3.6.4+dfsg-1 [302 kB] 212s Get:190 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cpp11 all 0.4.7-1 [266 kB] 212s Get:191 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cubelyr all 1.0.2-1 [347 kB] 212s Get:192 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-deldir armhf 2.0-4-1build1 [268 kB] 212s Get:193 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-desc all 1.4.3-1 [359 kB] 212s Get:194 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-diffobj armhf 0.3.5-1 [1115 kB] 212s Get:195 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-evaluate all 0.23-1 [90.2 kB] 212s Get:196 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 212s Get:197 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sp armhf 1:2.1-2+dfsg-1 [1445 kB] 212s Get:198 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-terra armhf 1.7-65-1build2 [3556 kB] 213s Get:199 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-raster armhf 3.6-26-1 [3093 kB] 213s Get:200 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-exactextractr armhf 0.10.0-1build2 [589 kB] 213s Get:201 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-farver armhf 2.1.1-2 [1353 kB] 213s Get:202 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fnn armhf 1.1.4-1 [115 kB] 213s Get:203 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fontawesome all 0.5.2-1 [1300 kB] 213s Get:204 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-formula all 1.2-5-1 [158 kB] 213s Get:205 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-globals all 0.16.3-1 [120 kB] 213s Get:206 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 213s Get:207 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-parallelly armhf 1.37.1-1build1 [364 kB] 213s Get:208 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-future all 1.33.1+dfsg-1 [634 kB] 213s Get:209 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 213s Get:210 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 213s Get:211 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-isoband armhf 0.2.7-1 [1477 kB] 213s Get:212 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-nlme armhf 3.1.164-1build1 [2248 kB] 214s Get:213 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-matrix armhf 1.6-5-1 [3762 kB] 214s Get:214 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mgcv armhf 1.9-1-1 [3205 kB] 214s Get:215 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-labeling all 0.4.3-1 [62.1 kB] 214s Get:216 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-munsell all 0.5.0-2build1 [208 kB] 214s Get:217 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 214s Get:218 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] 214s Get:219 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-scales all 1.3.0-1 [603 kB] 214s Get:220 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 214s Get:221 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tweenr armhf 2.0.3-1 [403 kB] 214s Get:222 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-polyclip armhf 1.10-6-1 [107 kB] 214s Get:223 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-systemfonts armhf 1.0.5-1 [215 kB] 214s Get:224 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcppeigen armhf 0.3.4.0.0-1build1 [1402 kB] 214s Get:225 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ggforce armhf 0.4.2-1 [1767 kB] 214s Get:226 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stringi armhf 1.8.3-1 [859 kB] 214s Get:227 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stringr all 1.5.1-1 [290 kB] 214s Get:228 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ggthemes all 5.1.0-1 [434 kB] 214s Get:229 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-goftest armhf 1.2-3-1 [58.6 kB] 214s Get:230 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] 214s Get:231 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-zoo armhf 1.8-12-2 [984 kB] 214s Get:232 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sftime all 0.2-0-6 [168 kB] 214s Get:233 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xts armhf 0.13.2-1 [764 kB] 214s Get:234 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-intervals armhf 0.15.4-1 [754 kB] 214s Get:235 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spacetime all 1.3-1-1 [2804 kB] 214s Get:236 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stars all 0.6-4-1 [4030 kB] 214s Get:237 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-gstat armhf 2.1-1-2 [2331 kB] 215s Get:238 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xfun armhf 0.44+dfsg-1 [517 kB] 215s Get:239 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-highr all 0.10+dfsg-2 [38.5 kB] 215s Get:240 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-later armhf 1.3.2+dfsg-1 [118 kB] 215s Get:241 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-promises armhf 1.3.0+dfsg-1 [285 kB] 215s Get:242 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-httpuv armhf 1.6.15+dfsg-1 [480 kB] 215s Get:243 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 215s Get:244 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-knitr all 1.46+dfsg-1 [911 kB] 215s Get:245 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lmtest armhf 0.9.40-1 [396 kB] 215s Get:246 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lwgeom armhf 0.2-13-3build2 [365 kB] 215s Get:247 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-maps armhf 3.4.2-1 [2355 kB] 215s Get:248 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mapdata armhf 2.3.1-1 [23.5 MB] 215s Get:249 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-misctools all 0.6-28-1 [99.9 kB] 215s Get:250 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sandwich all 3.1-0-1 [1484 kB] 215s Get:251 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-maxlik all 1.5-2-1 [1550 kB] 215s Get:252 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rnetcdf armhf 2.9-1-1build2 [231 kB] 215s Get:253 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tidyr armhf 1.3.1-1 [1152 kB] 215s Get:254 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ncmeta all 0.3.6-1 [360 kB] 215s Get:255 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 216s Get:256 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pbapply all 1.7-2-1 [102 kB] 216s Get:257 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pcict armhf 0.5-4.4-1 [92.9 kB] 216s Get:258 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgbuild all 1.4.3-1 [209 kB] 216s Get:259 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rprojroot all 2.0.4-1 [124 kB] 216s Get:260 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgload all 1.3.4-1 [207 kB] 216s Get:261 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rbibutils armhf 2.2.16-1 [677 kB] 216s Get:262 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rdpack all 2.6-1 [742 kB] 216s Get:263 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-plm all 2.6-4-1 [2161 kB] 216s Get:264 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-praise all 1.0.0-4build1 [20.3 kB] 216s Get:265 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-randomforest armhf 4.7-1.1-1 [210 kB] 216s Get:266 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 216s Get:267 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tinytex all 0.49-1 [141 kB] 216s Get:268 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-modernizr all 3.13.0-0.1 [101 kB] 216s Get:269 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] 216s Get:270 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] 216s Get:271 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 216s Get:272 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 216s Get:273 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 216s Get:274 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-survival armhf 3.5-8-1 [6104 kB] 216s Get:275 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rpart armhf 4.1.23-1build1 [657 kB] 216s Get:276 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.utils armhf 3.0-4-1 [359 kB] 216s Get:277 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.data all 3.0-4-1 [4090 kB] 216s Get:278 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.geom armhf 3.2-9-1 [3924 kB] 216s Get:279 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.random armhf 3.2-3-1 [1152 kB] 216s Get:280 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tensor all 1.5-4 [15.7 kB] 216s Get:281 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.sparse armhf 3.0-3-1 [213 kB] 216s Get:282 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.explore armhf 3.2-5-1 [3267 kB] 216s Get:283 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.model armhf 3.2-11-1 [3385 kB] 216s Get:284 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.linnet armhf 3.1-5-1 [1465 kB] 216s Get:285 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat armhf 3.0-7-1 [3817 kB] 217s Get:286 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-waldo all 0.5.2-1build1 [120 kB] 217s Get:287 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-testthat armhf 3.2.1-1 [1666 kB] 217s Get:288 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-viridis all 0.6.5-1 [2770 kB] 217s Preconfiguring packages ... 218s Fetched 282 MB in 10s (27.1 MB/s) 218s Selecting previously unselected package libfreetype6:armhf. 218s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58342 files and directories currently installed.) 218s Preparing to unpack .../000-libfreetype6_2.13.2+dfsg-1build3_armhf.deb ... 218s Unpacking libfreetype6:armhf (2.13.2+dfsg-1build3) ... 218s Selecting previously unselected package fonts-dejavu-mono. 218s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 218s Unpacking fonts-dejavu-mono (2.37-8) ... 218s Selecting previously unselected package fonts-dejavu-core. 218s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 218s Unpacking fonts-dejavu-core (2.37-8) ... 218s Selecting previously unselected package fontconfig-config. 218s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_armhf.deb ... 218s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 218s Selecting previously unselected package libfontconfig1:armhf. 218s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_armhf.deb ... 218s Unpacking libfontconfig1:armhf (2.15.0-1.1ubuntu2) ... 218s Selecting previously unselected package fontconfig. 218s Preparing to unpack .../005-fontconfig_2.15.0-1.1ubuntu2_armhf.deb ... 218s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 218s Selecting previously unselected package fonts-font-awesome. 218s Preparing to unpack .../006-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 218s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 218s Selecting previously unselected package fonts-glyphicons-halflings. 218s Preparing to unpack .../007-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 218s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 218s Selecting previously unselected package fonts-mathjax. 218s Preparing to unpack .../008-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 218s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 218s Selecting previously unselected package gdal-data. 218s Preparing to unpack .../009-gdal-data_3.8.5+dfsg-1_all.deb ... 218s Unpacking gdal-data (3.8.5+dfsg-1) ... 218s Selecting previously unselected package gdal-plugins:armhf. 218s Preparing to unpack .../010-gdal-plugins_3.8.5+dfsg-1_armhf.deb ... 218s Unpacking gdal-plugins:armhf (3.8.5+dfsg-1) ... 218s Selecting previously unselected package javascript-common. 218s Preparing to unpack .../011-javascript-common_11+nmu1_all.deb ... 218s Unpacking javascript-common (11+nmu1) ... 219s Selecting previously unselected package libaec0:armhf. 219s Preparing to unpack .../012-libaec0_1.1.3-1_armhf.deb ... 219s Unpacking libaec0:armhf (1.1.3-1) ... 219s Selecting previously unselected package libaom3:armhf. 219s Preparing to unpack .../013-libaom3_3.8.2-2build1_armhf.deb ... 219s Unpacking libaom3:armhf (3.8.2-2build1) ... 219s Selecting previously unselected package libblas3:armhf. 219s Preparing to unpack .../014-libblas3_3.12.0-3build1_armhf.deb ... 219s Unpacking libblas3:armhf (3.12.0-3build1) ... 219s Selecting previously unselected package libgfortran5:armhf. 219s Preparing to unpack .../015-libgfortran5_14.1.0-1ubuntu1_armhf.deb ... 219s Unpacking libgfortran5:armhf (14.1.0-1ubuntu1) ... 219s Selecting previously unselected package liblapack3:armhf. 219s Preparing to unpack .../016-liblapack3_3.12.0-3build1_armhf.deb ... 219s Unpacking liblapack3:armhf (3.12.0-3build1) ... 219s Selecting previously unselected package libarpack2t64:armhf. 219s Preparing to unpack .../017-libarpack2t64_3.9.1-1.1build2_armhf.deb ... 219s Unpacking libarpack2t64:armhf (3.9.1-1.1build2) ... 219s Selecting previously unselected package libsuperlu6:armhf. 219s Preparing to unpack .../018-libsuperlu6_6.0.1+dfsg1-1build1_armhf.deb ... 219s Unpacking libsuperlu6:armhf (6.0.1+dfsg1-1build1) ... 219s Selecting previously unselected package libarmadillo12. 219s Preparing to unpack .../019-libarmadillo12_1%3a12.8.2+dfsg-1_armhf.deb ... 219s Unpacking libarmadillo12 (1:12.8.2+dfsg-1) ... 219s Selecting previously unselected package libsnappy1v5:armhf. 219s Preparing to unpack .../020-libsnappy1v5_1.2.1-1_armhf.deb ... 219s Unpacking libsnappy1v5:armhf (1.2.1-1) ... 219s Selecting previously unselected package libblosc1:armhf. 219s Preparing to unpack .../021-libblosc1_1.21.5+ds-1build1_armhf.deb ... 219s Unpacking libblosc1:armhf (1.21.5+ds-1build1) ... 219s Selecting previously unselected package libpixman-1-0:armhf. 219s Preparing to unpack .../022-libpixman-1-0_0.42.2-1build1_armhf.deb ... 219s Unpacking libpixman-1-0:armhf (0.42.2-1build1) ... 219s Selecting previously unselected package libxcb-render0:armhf. 219s Preparing to unpack .../023-libxcb-render0_1.17.0-2_armhf.deb ... 219s Unpacking libxcb-render0:armhf (1.17.0-2) ... 219s Selecting previously unselected package libxcb-shm0:armhf. 219s Preparing to unpack .../024-libxcb-shm0_1.17.0-2_armhf.deb ... 219s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 219s Selecting previously unselected package libxrender1:armhf. 219s Preparing to unpack .../025-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 219s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 219s Selecting previously unselected package libcairo2:armhf. 219s Preparing to unpack .../026-libcairo2_1.18.0-3build1_armhf.deb ... 219s Unpacking libcairo2:armhf (1.18.0-3build1) ... 219s Selecting previously unselected package libcfitsio10t64:armhf. 219s Preparing to unpack .../027-libcfitsio10t64_4.3.1-1.1build2_armhf.deb ... 219s Unpacking libcfitsio10t64:armhf (4.3.1-1.1build2) ... 219s Selecting previously unselected package libdatrie1:armhf. 219s Preparing to unpack .../028-libdatrie1_0.2.13-3build1_armhf.deb ... 219s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 219s Selecting previously unselected package libde265-0:armhf. 219s Preparing to unpack .../029-libde265-0_1.0.15-1build3_armhf.deb ... 219s Unpacking libde265-0:armhf (1.0.15-1build3) ... 219s Selecting previously unselected package libdeflate0:armhf. 219s Preparing to unpack .../030-libdeflate0_1.20-1_armhf.deb ... 219s Unpacking libdeflate0:armhf (1.20-1) ... 219s Selecting previously unselected package libfyba0t64:armhf. 219s Preparing to unpack .../031-libfyba0t64_4.1.1-11build1_armhf.deb ... 219s Unpacking libfyba0t64:armhf (4.1.1-11build1) ... 219s Selecting previously unselected package libminizip1t64:armhf. 219s Preparing to unpack .../032-libminizip1t64_1%3a1.3.dfsg-3.1ubuntu2_armhf.deb ... 219s Unpacking libminizip1t64:armhf (1:1.3.dfsg-3.1ubuntu2) ... 219s Selecting previously unselected package libfreexl1:armhf. 219s Preparing to unpack .../033-libfreexl1_2.0.0-1build2_armhf.deb ... 219s Unpacking libfreexl1:armhf (2.0.0-1build2) ... 219s Selecting previously unselected package libgeos3.12.1t64:armhf. 219s Preparing to unpack .../034-libgeos3.12.1t64_3.12.1-3build1_armhf.deb ... 219s Unpacking libgeos3.12.1t64:armhf (3.12.1-3build1) ... 219s Selecting previously unselected package libgeos-c1t64:armhf. 219s Preparing to unpack .../035-libgeos-c1t64_3.12.1-3build1_armhf.deb ... 219s Unpacking libgeos-c1t64:armhf (3.12.1-3build1) ... 219s Selecting previously unselected package proj-data. 219s Preparing to unpack .../036-proj-data_9.4.0-1build2_all.deb ... 219s Unpacking proj-data (9.4.0-1build2) ... 220s Selecting previously unselected package libjbig0:armhf. 220s Preparing to unpack .../037-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 220s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 220s Selecting previously unselected package libjpeg-turbo8:armhf. 220s Preparing to unpack .../038-libjpeg-turbo8_2.1.5-2ubuntu2_armhf.deb ... 220s Unpacking libjpeg-turbo8:armhf (2.1.5-2ubuntu2) ... 220s Selecting previously unselected package libjpeg8:armhf. 220s Preparing to unpack .../039-libjpeg8_8c-2ubuntu11_armhf.deb ... 220s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 220s Selecting previously unselected package liblerc4:armhf. 220s Preparing to unpack .../040-liblerc4_4.0.0+ds-4ubuntu2_armhf.deb ... 220s Unpacking liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 220s Selecting previously unselected package libsharpyuv0:armhf. 220s Preparing to unpack .../041-libsharpyuv0_1.4.0-0.1_armhf.deb ... 220s Unpacking libsharpyuv0:armhf (1.4.0-0.1) ... 220s Selecting previously unselected package libwebp7:armhf. 220s Preparing to unpack .../042-libwebp7_1.4.0-0.1_armhf.deb ... 220s Unpacking libwebp7:armhf (1.4.0-0.1) ... 220s Selecting previously unselected package libtiff6:armhf. 220s Preparing to unpack .../043-libtiff6_4.5.1+git230720-4ubuntu2_armhf.deb ... 220s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu2) ... 220s Selecting previously unselected package libproj25:armhf. 220s Preparing to unpack .../044-libproj25_9.4.0-1build2_armhf.deb ... 220s Unpacking libproj25:armhf (9.4.0-1build2) ... 220s Selecting previously unselected package libgeotiff5:armhf. 220s Preparing to unpack .../045-libgeotiff5_1.7.1-5build1_armhf.deb ... 220s Unpacking libgeotiff5:armhf (1.7.1-5build1) ... 220s Selecting previously unselected package libgif7:armhf. 220s Preparing to unpack .../046-libgif7_5.2.2-1ubuntu1_armhf.deb ... 220s Unpacking libgif7:armhf (5.2.2-1ubuntu1) ... 220s Selecting previously unselected package libsz2:armhf. 220s Preparing to unpack .../047-libsz2_1.1.3-1_armhf.deb ... 220s Unpacking libsz2:armhf (1.1.3-1) ... 220s Selecting previously unselected package libhdf4-0-alt:armhf. 220s Preparing to unpack .../048-libhdf4-0-alt_4.3.0-1_armhf.deb ... 220s Unpacking libhdf4-0-alt:armhf (4.3.0-1) ... 220s Selecting previously unselected package libhdf5-103-1t64:armhf. 220s Preparing to unpack .../049-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 220s Unpacking libhdf5-103-1t64:armhf (1.10.10+repack-3.1ubuntu4) ... 220s Selecting previously unselected package libheif-plugin-aomdec:armhf. 220s Preparing to unpack .../050-libheif-plugin-aomdec_1.17.6-1ubuntu4_armhf.deb ... 220s Unpacking libheif-plugin-aomdec:armhf (1.17.6-1ubuntu4) ... 220s Selecting previously unselected package libheif-plugin-libde265:armhf. 220s Preparing to unpack .../051-libheif-plugin-libde265_1.17.6-1ubuntu4_armhf.deb ... 220s Unpacking libheif-plugin-libde265:armhf (1.17.6-1ubuntu4) ... 220s Selecting previously unselected package libheif1:armhf. 220s Preparing to unpack .../052-libheif1_1.17.6-1ubuntu4_armhf.deb ... 220s Unpacking libheif1:armhf (1.17.6-1ubuntu4) ... 220s Selecting previously unselected package liburiparser1:armhf. 220s Preparing to unpack .../053-liburiparser1_0.9.7+dfsg-2build1_armhf.deb ... 220s Unpacking liburiparser1:armhf (0.9.7+dfsg-2build1) ... 220s Selecting previously unselected package libkmlbase1t64:armhf. 220s Preparing to unpack .../054-libkmlbase1t64_1.3.0-12build1_armhf.deb ... 220s Unpacking libkmlbase1t64:armhf (1.3.0-12build1) ... 220s Selecting previously unselected package libkmldom1t64:armhf. 220s Preparing to unpack .../055-libkmldom1t64_1.3.0-12build1_armhf.deb ... 220s Unpacking libkmldom1t64:armhf (1.3.0-12build1) ... 220s Selecting previously unselected package libkmlengine1t64:armhf. 220s Preparing to unpack .../056-libkmlengine1t64_1.3.0-12build1_armhf.deb ... 220s Unpacking libkmlengine1t64:armhf (1.3.0-12build1) ... 220s Selecting previously unselected package mysql-common. 220s Preparing to unpack .../057-mysql-common_5.8+1.1.0build1_all.deb ... 220s Unpacking mysql-common (5.8+1.1.0build1) ... 220s Selecting previously unselected package libmysqlclient21:armhf. 220s Preparing to unpack .../058-libmysqlclient21_8.0.37-1_armhf.deb ... 220s Unpacking libmysqlclient21:armhf (8.0.37-1) ... 220s Selecting previously unselected package libhdf5-hl-100t64:armhf. 220s Preparing to unpack .../059-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 220s Unpacking libhdf5-hl-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... 220s Selecting previously unselected package libnetcdf19t64:armhf. 220s Preparing to unpack .../060-libnetcdf19t64_1%3a4.9.2-5ubuntu4_armhf.deb ... 220s Unpacking libnetcdf19t64:armhf (1:4.9.2-5ubuntu4) ... 220s Selecting previously unselected package libltdl7:armhf. 220s Preparing to unpack .../061-libltdl7_2.4.7-7build1_armhf.deb ... 220s Unpacking libltdl7:armhf (2.4.7-7build1) ... 220s Selecting previously unselected package libodbc2:armhf. 220s Preparing to unpack .../062-libodbc2_2.3.12-1build2_armhf.deb ... 220s Unpacking libodbc2:armhf (2.3.12-1build2) ... 220s Selecting previously unselected package unixodbc-common. 221s Preparing to unpack .../063-unixodbc-common_2.3.12-1build2_all.deb ... 221s Unpacking unixodbc-common (2.3.12-1build2) ... 221s Selecting previously unselected package libodbcinst2:armhf. 221s Preparing to unpack .../064-libodbcinst2_2.3.12-1build2_armhf.deb ... 221s Unpacking libodbcinst2:armhf (2.3.12-1build2) ... 221s Selecting previously unselected package libogdi4.1:armhf. 221s Preparing to unpack .../065-libogdi4.1_4.1.1+ds-4_armhf.deb ... 221s Unpacking libogdi4.1:armhf (4.1.1+ds-4) ... 221s Selecting previously unselected package libopenjp2-7:armhf. 221s Preparing to unpack .../066-libopenjp2-7_2.5.0-2build3_armhf.deb ... 221s Unpacking libopenjp2-7:armhf (2.5.0-2build3) ... 221s Selecting previously unselected package liblcms2-2:armhf. 221s Preparing to unpack .../067-liblcms2-2_2.14-2build1_armhf.deb ... 221s Unpacking liblcms2-2:armhf (2.14-2build1) ... 221s Selecting previously unselected package libpoppler134:armhf. 221s Preparing to unpack .../068-libpoppler134_24.02.0-1ubuntu9_armhf.deb ... 221s Unpacking libpoppler134:armhf (24.02.0-1ubuntu9) ... 221s Selecting previously unselected package libpq5:armhf. 221s Preparing to unpack .../069-libpq5_16.2-1ubuntu4_armhf.deb ... 221s Unpacking libpq5:armhf (16.2-1ubuntu4) ... 221s Selecting previously unselected package libqhull-r8.0:armhf. 221s Preparing to unpack .../070-libqhull-r8.0_2020.2-6build1_armhf.deb ... 221s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 221s Selecting previously unselected package librttopo1:armhf. 221s Preparing to unpack .../071-librttopo1_1.1.0-3build2_armhf.deb ... 221s Unpacking librttopo1:armhf (1.1.0-3build2) ... 221s Selecting previously unselected package libspatialite8t64:armhf. 221s Preparing to unpack .../072-libspatialite8t64_5.1.0-3build1_armhf.deb ... 221s Unpacking libspatialite8t64:armhf (5.1.0-3build1) ... 221s Selecting previously unselected package libxerces-c3.2t64:armhf. 221s Preparing to unpack .../073-libxerces-c3.2t64_3.2.4+debian-1.3_armhf.deb ... 221s Unpacking libxerces-c3.2t64:armhf (3.2.4+debian-1.3) ... 221s Selecting previously unselected package libgdal34t64:armhf. 221s Preparing to unpack .../074-libgdal34t64_3.8.5+dfsg-1_armhf.deb ... 221s Unpacking libgdal34t64:armhf (3.8.5+dfsg-1) ... 221s Selecting previously unselected package libgomp1:armhf. 221s Preparing to unpack .../075-libgomp1_14.1.0-1ubuntu1_armhf.deb ... 221s Unpacking libgomp1:armhf (14.1.0-1ubuntu1) ... 221s Selecting previously unselected package libgraphite2-3:armhf. 221s Preparing to unpack .../076-libgraphite2-3_1.3.14-2build1_armhf.deb ... 221s Unpacking libgraphite2-3:armhf (1.3.14-2build1) ... 221s Selecting previously unselected package libharfbuzz0b:armhf. 221s Preparing to unpack .../077-libharfbuzz0b_8.3.0-2build2_armhf.deb ... 221s Unpacking libharfbuzz0b:armhf (8.3.0-2build2) ... 221s Selecting previously unselected package x11-common. 221s Preparing to unpack .../078-x11-common_1%3a7.7+23ubuntu3_all.deb ... 221s Unpacking x11-common (1:7.7+23ubuntu3) ... 221s Selecting previously unselected package libice6:armhf. 221s Preparing to unpack .../079-libice6_2%3a1.0.10-1build3_armhf.deb ... 221s Unpacking libice6:armhf (2:1.0.10-1build3) ... 221s Selecting previously unselected package libjs-bootstrap. 221s Preparing to unpack .../080-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 221s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 221s Selecting previously unselected package libjs-popper.js. 221s Preparing to unpack .../081-libjs-popper.js_1.16.1+ds-6_all.deb ... 221s Unpacking libjs-popper.js (1.16.1+ds-6) ... 221s Selecting previously unselected package libjs-bootstrap4. 221s Preparing to unpack .../082-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 221s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 221s Selecting previously unselected package libjs-d3. 221s Preparing to unpack .../083-libjs-d3_3.5.17-4_all.deb ... 221s Unpacking libjs-d3 (3.5.17-4) ... 221s Selecting previously unselected package libjs-es5-shim. 221s Preparing to unpack .../084-libjs-es5-shim_4.6.7-2_all.deb ... 221s Unpacking libjs-es5-shim (4.6.7-2) ... 222s Selecting previously unselected package libjs-highlight.js. 222s Preparing to unpack .../085-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 222s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 222s Selecting previously unselected package libjs-jquery. 222s Preparing to unpack .../086-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 222s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 222s Selecting previously unselected package libjs-jquery-datatables. 222s Preparing to unpack .../087-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 222s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 222s Selecting previously unselected package libjs-sifter.js. 222s Preparing to unpack .../088-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 222s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 222s Selecting previously unselected package libjs-microplugin.js. 222s Preparing to unpack .../089-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 222s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 222s Selecting previously unselected package libjs-jquery-selectize.js. 222s Preparing to unpack .../090-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 222s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 222s Selecting previously unselected package libjs-jquery-ui. 222s Preparing to unpack .../091-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 222s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 222s Selecting previously unselected package libjs-json. 222s Preparing to unpack .../092-libjs-json_0~20221030+~1.0.8-1_all.deb ... 222s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 222s Selecting previously unselected package libjs-prettify. 222s Preparing to unpack .../093-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 222s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 222s Selecting previously unselected package liblua5.4-0:armhf. 222s Preparing to unpack .../094-liblua5.4-0_5.4.6-3build2_armhf.deb ... 222s Unpacking liblua5.4-0:armhf (5.4.6-3build2) ... 222s Selecting previously unselected package libthai-data. 222s Preparing to unpack .../095-libthai-data_0.1.29-2build1_all.deb ... 222s Unpacking libthai-data (0.1.29-2build1) ... 222s Selecting previously unselected package libthai0:armhf. 222s Preparing to unpack .../096-libthai0_0.1.29-2build1_armhf.deb ... 222s Unpacking libthai0:armhf (0.1.29-2build1) ... 222s Selecting previously unselected package libpango-1.0-0:armhf. 222s Preparing to unpack .../097-libpango-1.0-0_1.52.2+ds-1_armhf.deb ... 222s Unpacking libpango-1.0-0:armhf (1.52.2+ds-1) ... 222s Selecting previously unselected package libpangoft2-1.0-0:armhf. 222s Preparing to unpack .../098-libpangoft2-1.0-0_1.52.2+ds-1_armhf.deb ... 222s Unpacking libpangoft2-1.0-0:armhf (1.52.2+ds-1) ... 222s Selecting previously unselected package libpangocairo-1.0-0:armhf. 222s Preparing to unpack .../099-libpangocairo-1.0-0_1.52.2+ds-1_armhf.deb ... 222s Unpacking libpangocairo-1.0-0:armhf (1.52.2+ds-1) ... 222s Selecting previously unselected package libpaper1:armhf. 222s Preparing to unpack .../100-libpaper1_1.1.29build1_armhf.deb ... 222s Unpacking libpaper1:armhf (1.1.29build1) ... 222s Selecting previously unselected package libpaper-utils. 222s Preparing to unpack .../101-libpaper-utils_1.1.29build1_armhf.deb ... 222s Unpacking libpaper-utils (1.1.29build1) ... 222s Selecting previously unselected package libsm6:armhf. 222s Preparing to unpack .../102-libsm6_2%3a1.2.3-1build3_armhf.deb ... 222s Unpacking libsm6:armhf (2:1.2.3-1build3) ... 222s Selecting previously unselected package libtcl8.6:armhf. 222s Preparing to unpack .../103-libtcl8.6_8.6.14+dfsg-1build1_armhf.deb ... 222s Unpacking libtcl8.6:armhf (8.6.14+dfsg-1build1) ... 222s Selecting previously unselected package libxft2:armhf. 222s Preparing to unpack .../104-libxft2_2.3.6-1build1_armhf.deb ... 222s Unpacking libxft2:armhf (2.3.6-1build1) ... 222s Selecting previously unselected package libxss1:armhf. 222s Preparing to unpack .../105-libxss1_1%3a1.2.3-1build3_armhf.deb ... 222s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 222s Selecting previously unselected package libtk8.6:armhf. 222s Preparing to unpack .../106-libtk8.6_8.6.14-1build1_armhf.deb ... 222s Unpacking libtk8.6:armhf (8.6.14-1build1) ... 222s Selecting previously unselected package libudunits2-data. 222s Preparing to unpack .../107-libudunits2-data_2.2.28-7build1_all.deb ... 222s Unpacking libudunits2-data (2.2.28-7build1) ... 222s Selecting previously unselected package libudunits2-0. 222s Preparing to unpack .../108-libudunits2-0_2.2.28-7build1_armhf.deb ... 222s Unpacking libudunits2-0 (2.2.28-7build1) ... 222s Selecting previously unselected package libxt6t64:armhf. 222s Preparing to unpack .../109-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 222s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 222s Selecting previously unselected package zip. 222s Preparing to unpack .../110-zip_3.0-13build1_armhf.deb ... 222s Unpacking zip (3.0-13build1) ... 222s Selecting previously unselected package unzip. 222s Preparing to unpack .../111-unzip_6.0-28ubuntu4_armhf.deb ... 222s Unpacking unzip (6.0-28ubuntu4) ... 222s Selecting previously unselected package xdg-utils. 222s Preparing to unpack .../112-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 222s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 223s Selecting previously unselected package r-base-core. 223s Preparing to unpack .../113-r-base-core_4.4.0-2_armhf.deb ... 223s Unpacking r-base-core (4.4.0-2) ... 223s Selecting previously unselected package r-cran-littler. 223s Preparing to unpack .../114-r-cran-littler_0.3.20-1_armhf.deb ... 223s Unpacking r-cran-littler (0.3.20-1) ... 223s Selecting previously unselected package littler. 223s Preparing to unpack .../115-littler_0.3.20-1_all.deb ... 223s Unpacking littler (0.3.20-1) ... 223s Selecting previously unselected package node-bootstrap-sass. 223s Preparing to unpack .../116-node-bootstrap-sass_3.4.3-2_all.deb ... 223s Unpacking node-bootstrap-sass (3.4.3-2) ... 223s Selecting previously unselected package node-html5shiv. 223s Preparing to unpack .../117-node-html5shiv_3.7.3+dfsg-5_all.deb ... 223s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 223s Selecting previously unselected package node-normalize.css. 223s Preparing to unpack .../118-node-normalize.css_8.0.1-5_all.deb ... 223s Unpacking node-normalize.css (8.0.1-5) ... 223s Selecting previously unselected package pandoc-data. 223s Preparing to unpack .../119-pandoc-data_3.1.3-2build2_all.deb ... 223s Unpacking pandoc-data (3.1.3-2build2) ... 223s Selecting previously unselected package pandoc. 223s Preparing to unpack .../120-pandoc_3.1.3+ds-3build1_armhf.deb ... 223s Unpacking pandoc (3.1.3+ds-3build1) ... 224s Selecting previously unselected package r-cran-abind. 224s Preparing to unpack .../121-r-cran-abind_1.4-5-2_all.deb ... 224s Unpacking r-cran-abind (1.4-5-2) ... 224s Selecting previously unselected package r-cran-cli. 224s Preparing to unpack .../122-r-cran-cli_3.6.2-1_armhf.deb ... 224s Unpacking r-cran-cli (3.6.2-1) ... 224s Selecting previously unselected package r-cran-generics. 224s Preparing to unpack .../123-r-cran-generics_0.1.3-1_all.deb ... 224s Unpacking r-cran-generics (0.1.3-1) ... 224s Selecting previously unselected package r-cran-glue. 224s Preparing to unpack .../124-r-cran-glue_1.7.0-1_armhf.deb ... 224s Unpacking r-cran-glue (1.7.0-1) ... 224s Selecting previously unselected package r-cran-rlang. 224s Preparing to unpack .../125-r-cran-rlang_1.1.3-1_armhf.deb ... 224s Unpacking r-cran-rlang (1.1.3-1) ... 225s Selecting previously unselected package r-cran-lifecycle. 225s Preparing to unpack .../126-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 225s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 225s Selecting previously unselected package r-cran-magrittr. 225s Preparing to unpack .../127-r-cran-magrittr_2.0.3-1_armhf.deb ... 225s Unpacking r-cran-magrittr (2.0.3-1) ... 225s Selecting previously unselected package r-cran-fansi. 225s Preparing to unpack .../128-r-cran-fansi_1.0.5-1_armhf.deb ... 225s Unpacking r-cran-fansi (1.0.5-1) ... 225s Selecting previously unselected package r-cran-utf8. 225s Preparing to unpack .../129-r-cran-utf8_1.2.4-1_armhf.deb ... 225s Unpacking r-cran-utf8 (1.2.4-1) ... 225s Selecting previously unselected package r-cran-vctrs. 225s Preparing to unpack .../130-r-cran-vctrs_0.6.5-1_armhf.deb ... 225s Unpacking r-cran-vctrs (0.6.5-1) ... 225s Selecting previously unselected package r-cran-pillar. 225s Preparing to unpack .../131-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 225s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 225s Selecting previously unselected package r-cran-r6. 225s Preparing to unpack .../132-r-cran-r6_2.5.1-1_all.deb ... 225s Unpacking r-cran-r6 (2.5.1-1) ... 225s Selecting previously unselected package r-cran-pkgconfig. 225s Preparing to unpack .../133-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 225s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 225s Selecting previously unselected package r-cran-tibble. 225s Preparing to unpack .../134-r-cran-tibble_3.2.1+dfsg-2_armhf.deb ... 225s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 225s Selecting previously unselected package r-cran-withr. 225s Preparing to unpack .../135-r-cran-withr_2.5.0-1_all.deb ... 225s Unpacking r-cran-withr (2.5.0-1) ... 225s Selecting previously unselected package r-cran-tidyselect. 225s Preparing to unpack .../136-r-cran-tidyselect_1.2.0+dfsg-1_armhf.deb ... 225s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 225s Selecting previously unselected package r-cran-dplyr. 225s Preparing to unpack .../137-r-cran-dplyr_1.1.4-1_armhf.deb ... 225s Unpacking r-cran-dplyr (1.1.4-1) ... 225s Selecting previously unselected package r-cran-purrr. 225s Preparing to unpack .../138-r-cran-purrr_1.0.2-1_armhf.deb ... 225s Unpacking r-cran-purrr (1.0.2-1) ... 225s Selecting previously unselected package r-cran-mass. 225s Preparing to unpack .../139-r-cran-mass_7.3-60.0.1-1_armhf.deb ... 225s Unpacking r-cran-mass (7.3-60.0.1-1) ... 225s Selecting previously unselected package r-cran-class. 225s Preparing to unpack .../140-r-cran-class_7.3-22-2build1_armhf.deb ... 225s Unpacking r-cran-class (7.3-22-2build1) ... 225s Selecting previously unselected package r-cran-proxy. 225s Preparing to unpack .../141-r-cran-proxy_0.4-27-1_armhf.deb ... 225s Unpacking r-cran-proxy (0.4-27-1) ... 225s Selecting previously unselected package r-cran-e1071. 225s Preparing to unpack .../142-r-cran-e1071_1.7-14-1_armhf.deb ... 225s Unpacking r-cran-e1071 (1.7-14-1) ... 225s Selecting previously unselected package r-cran-kernsmooth. 225s Preparing to unpack .../143-r-cran-kernsmooth_2.23-24-1_armhf.deb ... 225s Unpacking r-cran-kernsmooth (2.23-24-1) ... 225s Selecting previously unselected package r-cran-classint. 225s Preparing to unpack .../144-r-cran-classint_0.4-10+dfsg-1_armhf.deb ... 225s Unpacking r-cran-classint (0.4-10+dfsg-1) ... 225s Selecting previously unselected package r-cran-dbi. 225s Preparing to unpack .../145-r-cran-dbi_1.2.2-1_all.deb ... 225s Unpacking r-cran-dbi (1.2.2-1) ... 225s Selecting previously unselected package r-cran-pkgkitten. 225s Preparing to unpack .../146-r-cran-pkgkitten_0.2.3-1_all.deb ... 225s Unpacking r-cran-pkgkitten (0.2.3-1) ... 225s Selecting previously unselected package r-cran-rcpp. 226s Preparing to unpack .../147-r-cran-rcpp_1.0.12-1_armhf.deb ... 226s Unpacking r-cran-rcpp (1.0.12-1) ... 226s Selecting previously unselected package r-cran-wk. 226s Preparing to unpack .../148-r-cran-wk_0.9.1-1_armhf.deb ... 226s Unpacking r-cran-wk (0.9.1-1) ... 226s Selecting previously unselected package r-cran-s2. 226s Preparing to unpack .../149-r-cran-s2_1.1.6-1build2_armhf.deb ... 226s Unpacking r-cran-s2 (1.1.6-1build2) ... 226s Selecting previously unselected package r-cran-units. 226s Preparing to unpack .../150-r-cran-units_0.8-5+dfsg-1_armhf.deb ... 226s Unpacking r-cran-units (0.8-5+dfsg-1) ... 226s Selecting previously unselected package r-cran-sf. 226s Preparing to unpack .../151-r-cran-sf_1.0-16+dfsg-1_armhf.deb ... 226s Unpacking r-cran-sf (1.0-16+dfsg-1) ... 226s Selecting previously unselected package r-cran-areal. 226s Preparing to unpack .../152-r-cran-areal_0.1.8+dfsg-2_all.deb ... 226s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 226s Selecting previously unselected package r-cran-sys. 226s Preparing to unpack .../153-r-cran-sys_3.4.2-1_armhf.deb ... 226s Unpacking r-cran-sys (3.4.2-1) ... 226s Selecting previously unselected package r-cran-askpass. 226s Preparing to unpack .../154-r-cran-askpass_1.2.0-1_armhf.deb ... 226s Unpacking r-cran-askpass (1.2.0-1) ... 226s Selecting previously unselected package r-cran-base64enc. 226s Preparing to unpack .../155-r-cran-base64enc_0.1-3-3_armhf.deb ... 226s Unpacking r-cran-base64enc (0.1-3-3) ... 226s Selecting previously unselected package r-cran-bdsmatrix. 226s Preparing to unpack .../156-r-cran-bdsmatrix_1.3-7-1_armhf.deb ... 226s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 226s Selecting previously unselected package r-cran-brio. 226s Preparing to unpack .../157-r-cran-brio_1.1.5-1_armhf.deb ... 226s Unpacking r-cran-brio (1.1.5-1) ... 226s Selecting previously unselected package r-cran-fastmap. 226s Preparing to unpack .../158-r-cran-fastmap_1.1.1-1_armhf.deb ... 226s Unpacking r-cran-fastmap (1.1.1-1) ... 226s Selecting previously unselected package r-cran-cachem. 226s Preparing to unpack .../159-r-cran-cachem_1.0.8-1_armhf.deb ... 226s Unpacking r-cran-cachem (1.0.8-1) ... 226s Selecting previously unselected package r-cran-digest. 226s Preparing to unpack .../160-r-cran-digest_0.6.35-1_armhf.deb ... 226s Unpacking r-cran-digest (0.6.35-1) ... 226s Selecting previously unselected package r-cran-htmltools. 226s Preparing to unpack .../161-r-cran-htmltools_0.5.8.1-1_armhf.deb ... 226s Unpacking r-cran-htmltools (0.5.8.1-1) ... 226s Selecting previously unselected package r-cran-jquerylib. 226s Preparing to unpack .../162-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 226s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 226s Selecting previously unselected package r-cran-jsonlite. 226s Preparing to unpack .../163-r-cran-jsonlite_1.8.8+dfsg-1_armhf.deb ... 226s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 226s Selecting previously unselected package r-cran-memoise. 226s Preparing to unpack .../164-r-cran-memoise_2.0.1-1_all.deb ... 226s Unpacking r-cran-memoise (2.0.1-1) ... 227s Selecting previously unselected package r-cran-mime. 227s Preparing to unpack .../165-r-cran-mime_0.12-2_armhf.deb ... 227s Unpacking r-cran-mime (0.12-2) ... 227s Selecting previously unselected package r-cran-fs. 227s Preparing to unpack .../166-r-cran-fs_1.6.3+dfsg-1build2_armhf.deb ... 227s Unpacking r-cran-fs (1.6.3+dfsg-1build2) ... 227s Selecting previously unselected package r-cran-rappdirs. 227s Preparing to unpack .../167-r-cran-rappdirs_0.3.3-1_armhf.deb ... 227s Unpacking r-cran-rappdirs (0.3.3-1) ... 227s Selecting previously unselected package r-cran-sass. 227s Preparing to unpack .../168-r-cran-sass_0.4.9+dfsg-1_armhf.deb ... 227s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 227s Selecting previously unselected package r-cran-bslib. 227s Preparing to unpack .../169-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 227s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 227s Selecting previously unselected package r-cran-cairo. 227s Preparing to unpack .../170-r-cran-cairo_1.6-2-1_armhf.deb ... 227s Unpacking r-cran-cairo (1.6-2-1) ... 227s Selecting previously unselected package r-cran-ps. 227s Preparing to unpack .../171-r-cran-ps_1.7.6-1_armhf.deb ... 227s Unpacking r-cran-ps (1.7.6-1) ... 227s Selecting previously unselected package r-cran-processx. 227s Preparing to unpack .../172-r-cran-processx_3.8.3-1_armhf.deb ... 227s Unpacking r-cran-processx (3.8.3-1) ... 227s Selecting previously unselected package r-cran-callr. 227s Preparing to unpack .../173-r-cran-callr_3.7.6-1_all.deb ... 227s Unpacking r-cran-callr (3.7.6-1) ... 227s Selecting previously unselected package r-cran-cluster. 227s Preparing to unpack .../174-r-cran-cluster_2.1.6-1build1_armhf.deb ... 227s Unpacking r-cran-cluster (2.1.6-1build1) ... 227s Selecting previously unselected package r-cran-clue. 227s Preparing to unpack .../175-r-cran-clue_0.3-65-1_armhf.deb ... 227s Unpacking r-cran-clue (0.3-65-1) ... 227s Selecting previously unselected package r-cran-codetools. 227s Preparing to unpack .../176-r-cran-codetools_0.2-20-1_all.deb ... 227s Unpacking r-cran-codetools (0.2-20-1) ... 227s Selecting previously unselected package r-cran-collapse. 227s Preparing to unpack .../177-r-cran-collapse_2.0.13-1_armhf.deb ... 227s Unpacking r-cran-collapse (2.0.13-1) ... 227s Selecting previously unselected package r-cran-colorspace. 227s Preparing to unpack .../178-r-cran-colorspace_2.1-0+dfsg-1_armhf.deb ... 227s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 227s Selecting previously unselected package r-cran-commonmark. 227s Preparing to unpack .../179-r-cran-commonmark_1.9.1-1_armhf.deb ... 227s Unpacking r-cran-commonmark (1.9.1-1) ... 227s Selecting previously unselected package r-cran-lazyeval. 227s Preparing to unpack .../180-r-cran-lazyeval_0.2.2-1build1_armhf.deb ... 227s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 227s Selecting previously unselected package r-cran-rex. 227s Preparing to unpack .../181-r-cran-rex_1.2.1-1_all.deb ... 227s Unpacking r-cran-rex (1.2.1-1) ... 227s Selecting previously unselected package r-cran-curl. 227s Preparing to unpack .../182-r-cran-curl_5.2.0+dfsg-1build2_armhf.deb ... 227s Unpacking r-cran-curl (5.2.0+dfsg-1build2) ... 227s Selecting previously unselected package r-cran-openssl. 227s Preparing to unpack .../183-r-cran-openssl_2.1.1+dfsg-2build2_armhf.deb ... 227s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ... 227s Selecting previously unselected package r-cran-httr. 227s Preparing to unpack .../184-r-cran-httr_1.4.7+dfsg-1_all.deb ... 227s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 227s Selecting previously unselected package r-cran-crayon. 227s Preparing to unpack .../185-r-cran-crayon_1.5.2-1_all.deb ... 227s Unpacking r-cran-crayon (1.5.2-1) ... 227s Selecting previously unselected package r-cran-yaml. 228s Preparing to unpack .../186-r-cran-yaml_2.3.8-2_armhf.deb ... 228s Unpacking r-cran-yaml (2.3.8-2) ... 228s Selecting previously unselected package r-cran-covr. 228s Preparing to unpack .../187-r-cran-covr_3.6.4+dfsg-1_armhf.deb ... 228s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 228s Selecting previously unselected package r-cran-cpp11. 228s Preparing to unpack .../188-r-cran-cpp11_0.4.7-1_all.deb ... 228s Unpacking r-cran-cpp11 (0.4.7-1) ... 228s Selecting previously unselected package r-cran-cubelyr. 228s Preparing to unpack .../189-r-cran-cubelyr_1.0.2-1_all.deb ... 228s Unpacking r-cran-cubelyr (1.0.2-1) ... 228s Selecting previously unselected package r-cran-deldir. 228s Preparing to unpack .../190-r-cran-deldir_2.0-4-1build1_armhf.deb ... 228s Unpacking r-cran-deldir (2.0-4-1build1) ... 228s Selecting previously unselected package r-cran-desc. 228s Preparing to unpack .../191-r-cran-desc_1.4.3-1_all.deb ... 228s Unpacking r-cran-desc (1.4.3-1) ... 228s Selecting previously unselected package r-cran-diffobj. 228s Preparing to unpack .../192-r-cran-diffobj_0.3.5-1_armhf.deb ... 228s Unpacking r-cran-diffobj (0.3.5-1) ... 228s Selecting previously unselected package r-cran-evaluate. 228s Preparing to unpack .../193-r-cran-evaluate_0.23-1_all.deb ... 228s Unpacking r-cran-evaluate (0.23-1) ... 228s Selecting previously unselected package r-cran-lattice. 228s Preparing to unpack .../194-r-cran-lattice_0.22-6-1_armhf.deb ... 228s Unpacking r-cran-lattice (0.22-6-1) ... 228s Selecting previously unselected package r-cran-sp. 228s Preparing to unpack .../195-r-cran-sp_1%3a2.1-2+dfsg-1_armhf.deb ... 228s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 228s Selecting previously unselected package r-cran-terra. 228s Preparing to unpack .../196-r-cran-terra_1.7-65-1build2_armhf.deb ... 228s Unpacking r-cran-terra (1.7-65-1build2) ... 228s Selecting previously unselected package r-cran-raster. 228s Preparing to unpack .../197-r-cran-raster_3.6-26-1_armhf.deb ... 228s Unpacking r-cran-raster (3.6-26-1) ... 228s Selecting previously unselected package r-cran-exactextractr. 228s Preparing to unpack .../198-r-cran-exactextractr_0.10.0-1build2_armhf.deb ... 228s Unpacking r-cran-exactextractr (0.10.0-1build2) ... 228s Selecting previously unselected package r-cran-farver. 228s Preparing to unpack .../199-r-cran-farver_2.1.1-2_armhf.deb ... 228s Unpacking r-cran-farver (2.1.1-2) ... 228s Selecting previously unselected package r-cran-fnn. 228s Preparing to unpack .../200-r-cran-fnn_1.1.4-1_armhf.deb ... 228s Unpacking r-cran-fnn (1.1.4-1) ... 228s Selecting previously unselected package r-cran-fontawesome. 228s Preparing to unpack .../201-r-cran-fontawesome_0.5.2-1_all.deb ... 228s Unpacking r-cran-fontawesome (0.5.2-1) ... 228s Selecting previously unselected package r-cran-formula. 228s Preparing to unpack .../202-r-cran-formula_1.2-5-1_all.deb ... 228s Unpacking r-cran-formula (1.2-5-1) ... 228s Selecting previously unselected package r-cran-globals. 228s Preparing to unpack .../203-r-cran-globals_0.16.3-1_all.deb ... 228s Unpacking r-cran-globals (0.16.3-1) ... 228s Selecting previously unselected package r-cran-listenv. 228s Preparing to unpack .../204-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 228s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 228s Selecting previously unselected package r-cran-parallelly. 228s Preparing to unpack .../205-r-cran-parallelly_1.37.1-1build1_armhf.deb ... 228s Unpacking r-cran-parallelly (1.37.1-1build1) ... 228s Selecting previously unselected package r-cran-future. 228s Preparing to unpack .../206-r-cran-future_1.33.1+dfsg-1_all.deb ... 228s Unpacking r-cran-future (1.33.1+dfsg-1) ... 229s Selecting previously unselected package r-cran-future.apply. 229s Preparing to unpack .../207-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 229s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 229s Selecting previously unselected package r-cran-gtable. 229s Preparing to unpack .../208-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 229s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 229s Selecting previously unselected package r-cran-isoband. 229s Preparing to unpack .../209-r-cran-isoband_0.2.7-1_armhf.deb ... 229s Unpacking r-cran-isoband (0.2.7-1) ... 229s Selecting previously unselected package r-cran-nlme. 229s Preparing to unpack .../210-r-cran-nlme_3.1.164-1build1_armhf.deb ... 229s Unpacking r-cran-nlme (3.1.164-1build1) ... 229s Selecting previously unselected package r-cran-matrix. 229s Preparing to unpack .../211-r-cran-matrix_1.6-5-1_armhf.deb ... 229s Unpacking r-cran-matrix (1.6-5-1) ... 229s Selecting previously unselected package r-cran-mgcv. 229s Preparing to unpack .../212-r-cran-mgcv_1.9-1-1_armhf.deb ... 229s Unpacking r-cran-mgcv (1.9-1-1) ... 229s Selecting previously unselected package r-cran-labeling. 229s Preparing to unpack .../213-r-cran-labeling_0.4.3-1_all.deb ... 229s Unpacking r-cran-labeling (0.4.3-1) ... 229s Selecting previously unselected package r-cran-munsell. 229s Preparing to unpack .../214-r-cran-munsell_0.5.0-2build1_all.deb ... 229s Unpacking r-cran-munsell (0.5.0-2build1) ... 229s Selecting previously unselected package r-cran-rcolorbrewer. 229s Preparing to unpack .../215-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 229s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 229s Selecting previously unselected package r-cran-viridislite. 229s Preparing to unpack .../216-r-cran-viridislite_0.4.2-2_all.deb ... 229s Unpacking r-cran-viridislite (0.4.2-2) ... 229s Selecting previously unselected package r-cran-scales. 229s Preparing to unpack .../217-r-cran-scales_1.3.0-1_all.deb ... 229s Unpacking r-cran-scales (1.3.0-1) ... 229s Selecting previously unselected package r-cran-ggplot2. 229s Preparing to unpack .../218-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 229s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 229s Selecting previously unselected package r-cran-tweenr. 229s Preparing to unpack .../219-r-cran-tweenr_2.0.3-1_armhf.deb ... 229s Unpacking r-cran-tweenr (2.0.3-1) ... 229s Selecting previously unselected package r-cran-polyclip. 229s Preparing to unpack .../220-r-cran-polyclip_1.10-6-1_armhf.deb ... 229s Unpacking r-cran-polyclip (1.10-6-1) ... 229s Selecting previously unselected package r-cran-systemfonts. 229s Preparing to unpack .../221-r-cran-systemfonts_1.0.5-1_armhf.deb ... 229s Unpacking r-cran-systemfonts (1.0.5-1) ... 229s Selecting previously unselected package r-cran-rcppeigen. 229s Preparing to unpack .../222-r-cran-rcppeigen_0.3.4.0.0-1build1_armhf.deb ... 229s Unpacking r-cran-rcppeigen (0.3.4.0.0-1build1) ... 229s Selecting previously unselected package r-cran-ggforce. 229s Preparing to unpack .../223-r-cran-ggforce_0.4.2-1_armhf.deb ... 229s Unpacking r-cran-ggforce (0.4.2-1) ... 230s Selecting previously unselected package r-cran-stringi. 230s Preparing to unpack .../224-r-cran-stringi_1.8.3-1_armhf.deb ... 230s Unpacking r-cran-stringi (1.8.3-1) ... 230s Selecting previously unselected package r-cran-stringr. 230s Preparing to unpack .../225-r-cran-stringr_1.5.1-1_all.deb ... 230s Unpacking r-cran-stringr (1.5.1-1) ... 230s Selecting previously unselected package r-cran-ggthemes. 230s Preparing to unpack .../226-r-cran-ggthemes_5.1.0-1_all.deb ... 230s Unpacking r-cran-ggthemes (5.1.0-1) ... 230s Selecting previously unselected package r-cran-goftest. 230s Preparing to unpack .../227-r-cran-goftest_1.2-3-1_armhf.deb ... 230s Unpacking r-cran-goftest (1.2-3-1) ... 230s Selecting previously unselected package r-cran-gridextra. 230s Preparing to unpack .../228-r-cran-gridextra_2.3-3build1_all.deb ... 230s Unpacking r-cran-gridextra (2.3-3build1) ... 230s Selecting previously unselected package r-cran-zoo. 230s Preparing to unpack .../229-r-cran-zoo_1.8-12-2_armhf.deb ... 230s Unpacking r-cran-zoo (1.8-12-2) ... 230s Selecting previously unselected package r-cran-sftime. 230s Preparing to unpack .../230-r-cran-sftime_0.2-0-6_all.deb ... 230s Unpacking r-cran-sftime (0.2-0-6) ... 230s Selecting previously unselected package r-cran-xts. 230s Preparing to unpack .../231-r-cran-xts_0.13.2-1_armhf.deb ... 230s Unpacking r-cran-xts (0.13.2-1) ... 230s Selecting previously unselected package r-cran-intervals. 230s Preparing to unpack .../232-r-cran-intervals_0.15.4-1_armhf.deb ... 230s Unpacking r-cran-intervals (0.15.4-1) ... 230s Selecting previously unselected package r-cran-spacetime. 230s Preparing to unpack .../233-r-cran-spacetime_1.3-1-1_all.deb ... 230s Unpacking r-cran-spacetime (1.3-1-1) ... 230s Selecting previously unselected package r-cran-stars. 230s Preparing to unpack .../234-r-cran-stars_0.6-4-1_all.deb ... 230s Unpacking r-cran-stars (0.6-4-1) ... 230s Selecting previously unselected package r-cran-gstat. 230s Preparing to unpack .../235-r-cran-gstat_2.1-1-2_armhf.deb ... 230s Unpacking r-cran-gstat (2.1-1-2) ... 230s Selecting previously unselected package r-cran-xfun. 230s Preparing to unpack .../236-r-cran-xfun_0.44+dfsg-1_armhf.deb ... 230s Unpacking r-cran-xfun (0.44+dfsg-1) ... 230s Selecting previously unselected package r-cran-highr. 230s Preparing to unpack .../237-r-cran-highr_0.10+dfsg-2_all.deb ... 230s Unpacking r-cran-highr (0.10+dfsg-2) ... 230s Selecting previously unselected package r-cran-later. 230s Preparing to unpack .../238-r-cran-later_1.3.2+dfsg-1_armhf.deb ... 230s Unpacking r-cran-later (1.3.2+dfsg-1) ... 230s Selecting previously unselected package r-cran-promises. 230s Preparing to unpack .../239-r-cran-promises_1.3.0+dfsg-1_armhf.deb ... 230s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 230s Selecting previously unselected package r-cran-httpuv. 230s Preparing to unpack .../240-r-cran-httpuv_1.6.15+dfsg-1_armhf.deb ... 230s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 230s Selecting previously unselected package libjs-mathjax. 230s Preparing to unpack .../241-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 230s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 231s Selecting previously unselected package r-cran-knitr. 231s Preparing to unpack .../242-r-cran-knitr_1.46+dfsg-1_all.deb ... 231s Unpacking r-cran-knitr (1.46+dfsg-1) ... 231s Selecting previously unselected package r-cran-lmtest. 231s Preparing to unpack .../243-r-cran-lmtest_0.9.40-1_armhf.deb ... 231s Unpacking r-cran-lmtest (0.9.40-1) ... 231s Selecting previously unselected package r-cran-lwgeom. 231s Preparing to unpack .../244-r-cran-lwgeom_0.2-13-3build2_armhf.deb ... 231s Unpacking r-cran-lwgeom (0.2-13-3build2) ... 231s Selecting previously unselected package r-cran-maps. 232s Preparing to unpack .../245-r-cran-maps_3.4.2-1_armhf.deb ... 232s Unpacking r-cran-maps (3.4.2-1) ... 232s Selecting previously unselected package r-cran-mapdata. 232s Preparing to unpack .../246-r-cran-mapdata_2.3.1-1_armhf.deb ... 232s Unpacking r-cran-mapdata (2.3.1-1) ... 232s Selecting previously unselected package r-cran-misctools. 232s Preparing to unpack .../247-r-cran-misctools_0.6-28-1_all.deb ... 232s Unpacking r-cran-misctools (0.6-28-1) ... 232s Selecting previously unselected package r-cran-sandwich. 232s Preparing to unpack .../248-r-cran-sandwich_3.1-0-1_all.deb ... 232s Unpacking r-cran-sandwich (3.1-0-1) ... 232s Selecting previously unselected package r-cran-maxlik. 232s Preparing to unpack .../249-r-cran-maxlik_1.5-2-1_all.deb ... 232s Unpacking r-cran-maxlik (1.5-2-1) ... 232s Selecting previously unselected package r-cran-rnetcdf. 232s Preparing to unpack .../250-r-cran-rnetcdf_2.9-1-1build2_armhf.deb ... 232s Unpacking r-cran-rnetcdf (2.9-1-1build2) ... 232s Selecting previously unselected package r-cran-tidyr. 232s Preparing to unpack .../251-r-cran-tidyr_1.3.1-1_armhf.deb ... 232s Unpacking r-cran-tidyr (1.3.1-1) ... 232s Selecting previously unselected package r-cran-ncmeta. 232s Preparing to unpack .../252-r-cran-ncmeta_0.3.6-1_all.deb ... 232s Unpacking r-cran-ncmeta (0.3.6-1) ... 232s Selecting previously unselected package r-cran-ncdfgeom. 232s Preparing to unpack .../253-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 232s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 233s Selecting previously unselected package r-cran-pbapply. 233s Preparing to unpack .../254-r-cran-pbapply_1.7-2-1_all.deb ... 233s Unpacking r-cran-pbapply (1.7-2-1) ... 233s Selecting previously unselected package r-cran-pcict. 233s Preparing to unpack .../255-r-cran-pcict_0.5-4.4-1_armhf.deb ... 233s Unpacking r-cran-pcict (0.5-4.4-1) ... 233s Selecting previously unselected package r-cran-pkgbuild. 233s Preparing to unpack .../256-r-cran-pkgbuild_1.4.3-1_all.deb ... 233s Unpacking r-cran-pkgbuild (1.4.3-1) ... 233s Selecting previously unselected package r-cran-rprojroot. 233s Preparing to unpack .../257-r-cran-rprojroot_2.0.4-1_all.deb ... 233s Unpacking r-cran-rprojroot (2.0.4-1) ... 233s Selecting previously unselected package r-cran-pkgload. 233s Preparing to unpack .../258-r-cran-pkgload_1.3.4-1_all.deb ... 233s Unpacking r-cran-pkgload (1.3.4-1) ... 233s Selecting previously unselected package r-cran-rbibutils. 233s Preparing to unpack .../259-r-cran-rbibutils_2.2.16-1_armhf.deb ... 233s Unpacking r-cran-rbibutils (2.2.16-1) ... 233s Selecting previously unselected package r-cran-rdpack. 233s Preparing to unpack .../260-r-cran-rdpack_2.6-1_all.deb ... 233s Unpacking r-cran-rdpack (2.6-1) ... 233s Selecting previously unselected package r-cran-plm. 233s Preparing to unpack .../261-r-cran-plm_2.6-4-1_all.deb ... 233s Unpacking r-cran-plm (2.6-4-1) ... 233s Selecting previously unselected package r-cran-praise. 233s Preparing to unpack .../262-r-cran-praise_1.0.0-4build1_all.deb ... 233s Unpacking r-cran-praise (1.0.0-4build1) ... 233s Selecting previously unselected package r-cran-randomforest. 233s Preparing to unpack .../263-r-cran-randomforest_4.7-1.1-1_armhf.deb ... 233s Unpacking r-cran-randomforest (4.7-1.1-1) ... 233s Selecting previously unselected package r-cran-rematch2. 233s Preparing to unpack .../264-r-cran-rematch2_2.1.2-2build1_all.deb ... 233s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 233s Selecting previously unselected package r-cran-tinytex. 233s Preparing to unpack .../265-r-cran-tinytex_0.49-1_all.deb ... 233s Unpacking r-cran-tinytex (0.49-1) ... 233s Selecting previously unselected package libjs-modernizr. 233s Preparing to unpack .../266-libjs-modernizr_3.13.0-0.1_all.deb ... 233s Unpacking libjs-modernizr (3.13.0-0.1) ... 233s Selecting previously unselected package r-cran-xtable. 233s Preparing to unpack .../267-r-cran-xtable_1%3a1.8-4-2_all.deb ... 233s Unpacking r-cran-xtable (1:1.8-4-2) ... 233s Selecting previously unselected package r-cran-sourcetools. 233s Preparing to unpack .../268-r-cran-sourcetools_0.1.7-1-1_armhf.deb ... 233s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 233s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 233s Preparing to unpack .../269-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 233s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 233s Selecting previously unselected package r-cran-shiny. 233s Preparing to unpack .../270-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 233s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 233s Selecting previously unselected package r-cran-rmarkdown. 233s Preparing to unpack .../271-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 233s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 234s Selecting previously unselected package r-cran-survival. 234s Preparing to unpack .../272-r-cran-survival_3.5-8-1_armhf.deb ... 234s Unpacking r-cran-survival (3.5-8-1) ... 234s Selecting previously unselected package r-cran-rpart. 234s Preparing to unpack .../273-r-cran-rpart_4.1.23-1build1_armhf.deb ... 234s Unpacking r-cran-rpart (4.1.23-1build1) ... 234s Selecting previously unselected package r-cran-spatstat.utils. 234s Preparing to unpack .../274-r-cran-spatstat.utils_3.0-4-1_armhf.deb ... 234s Unpacking r-cran-spatstat.utils (3.0-4-1) ... 234s Selecting previously unselected package r-cran-spatstat.data. 234s Preparing to unpack .../275-r-cran-spatstat.data_3.0-4-1_all.deb ... 234s Unpacking r-cran-spatstat.data (3.0-4-1) ... 234s Selecting previously unselected package r-cran-spatstat.geom. 234s Preparing to unpack .../276-r-cran-spatstat.geom_3.2-9-1_armhf.deb ... 234s Unpacking r-cran-spatstat.geom (3.2-9-1) ... 234s Selecting previously unselected package r-cran-spatstat.random. 234s Preparing to unpack .../277-r-cran-spatstat.random_3.2-3-1_armhf.deb ... 234s Unpacking r-cran-spatstat.random (3.2-3-1) ... 234s Selecting previously unselected package r-cran-tensor. 234s Preparing to unpack .../278-r-cran-tensor_1.5-4_all.deb ... 234s Unpacking r-cran-tensor (1.5-4) ... 234s Selecting previously unselected package r-cran-spatstat.sparse. 234s Preparing to unpack .../279-r-cran-spatstat.sparse_3.0-3-1_armhf.deb ... 234s Unpacking r-cran-spatstat.sparse (3.0-3-1) ... 234s Selecting previously unselected package r-cran-spatstat.explore. 234s Preparing to unpack .../280-r-cran-spatstat.explore_3.2-5-1_armhf.deb ... 234s Unpacking r-cran-spatstat.explore (3.2-5-1) ... 234s Selecting previously unselected package r-cran-spatstat.model. 234s Preparing to unpack .../281-r-cran-spatstat.model_3.2-11-1_armhf.deb ... 234s Unpacking r-cran-spatstat.model (3.2-11-1) ... 234s Selecting previously unselected package r-cran-spatstat.linnet. 234s Preparing to unpack .../282-r-cran-spatstat.linnet_3.1-5-1_armhf.deb ... 234s Unpacking r-cran-spatstat.linnet (3.1-5-1) ... 234s Selecting previously unselected package r-cran-spatstat. 234s Preparing to unpack .../283-r-cran-spatstat_3.0-7-1_armhf.deb ... 234s Unpacking r-cran-spatstat (3.0-7-1) ... 234s Selecting previously unselected package r-cran-waldo. 234s 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(1.0.2-1) ... 238s Setting up r-cran-pkgload (1.3.4-1) ... 238s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 238s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 238s Setting up r-cran-rematch2 (2.1.2-2build1) ... 238s Setting up r-cran-rpart (4.1.23-1build1) ... 238s Setting up r-cran-spatstat.random (3.2-3-1) ... 238s Setting up r-cran-plm (2.6-4-1) ... 238s Setting up r-cran-viridis (0.6.5-1) ... 238s Setting up r-cran-classint (0.4-10+dfsg-1) ... 238s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 238s Setting up r-cran-spatstat.explore (3.2-5-1) ... 238s Setting up r-cran-ggthemes (5.1.0-1) ... 238s Setting up r-cran-waldo (0.5.2-1build1) ... 238s Setting up r-cran-tidyr (1.3.1-1) ... 238s Setting up r-cran-ggforce (0.4.2-1) ... 238s Setting up r-cran-spatstat.model (3.2-11-1) ... 238s Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... 238s Setting up r-cran-testthat (3.2.1-1) ... 238s Setting up r-cran-ncmeta (0.3.6-1) ... 238s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 238s Setting up r-cran-spatstat.linnet (3.1-5-1) ... 238s Setting up r-cran-spatstat (3.0-7-1) ... 238s Setting up libheif-plugin-aomdec:armhf (1.17.6-1ubuntu4) ... 238s Setting up libheif-plugin-libde265:armhf (1.17.6-1ubuntu4) ... 238s Setting up libheif1:armhf (1.17.6-1ubuntu4) ... 238s Setting up libgdal34t64:armhf (3.8.5+dfsg-1) ... 238s Setting up r-cran-terra (1.7-65-1build2) ... 238s Setting up r-cran-sf (1.0-16+dfsg-1) ... 238s Setting up r-cran-stars (0.6-4-1) ... 238s Setting up r-cran-sftime (0.2-0-6) ... 238s Setting up r-cran-areal (0.1.8+dfsg-2) ... 238s Setting up r-cran-gstat (2.1-1-2) ... 238s Setting up r-cran-raster (3.6-26-1) ... 238s Setting up r-cran-lwgeom (0.2-13-3build2) ... 238s Setting up r-cran-exactextractr (0.10.0-1build2) ... 238s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 238s Setting up autopkgtest-satdep (0) ... 238s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 238s Processing triggers for man-db (2.12.1-1) ... 241s Processing triggers for install-info (7.1-3build2) ... 290s (Reading database ... 82905 files and directories currently installed.) 290s Removing autopkgtest-satdep (0) ... 297s autopkgtest [08:35:25]: test run-unit-test: [----------------------- 299s BEGIN TEST aggregate.R 299s 299s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 299s Copyright (C) 2024 The R Foundation for Statistical Computing 299s Platform: arm-unknown-linux-gnueabihf (32-bit) 299s 299s R is free software and comes with ABSOLUTELY NO WARRANTY. 299s You are welcome to redistribute it under certain conditions. 299s Type 'license()' or 'licence()' for distribution details. 299s 299s R is a collaborative project with many contributors. 299s Type 'contributors()' for more information and 299s 'citation()' on how to cite R or R packages in publications. 299s 299s Type 'demo()' for some demos, 'help()' for on-line help, or 299s 'help.start()' for an HTML browser interface to help. 299s Type 'q()' to quit R. 299s 299s > library(stars) 299s Loading required package: abind 299s Loading required package: sf 300s Linking to GEOS 3.12.1, GDAL 3.8.5, PROJ 9.4.0; sf_use_s2() is TRUE 300s > 300s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 300s + data(air) # this loads several datasets in .GlobalEnv 300s + dim(air) 300s + d = st_dimensions(station = st_set_crs(st_as_sfc(stations), 4326), time = dates) 300s + 300s + blocks = st_make_grid(st_as_sfc("POLYGON ((5.871619 47.26986, 15.03811 47.26986, 15.03811 55.05653, 5.871619 55.05653, 5.871619 47.26986))", crs = 4326), 300s + n = c(3,3)) 300s + 300s + print(aq <- st_as_stars(list(PM10 = air), dimensions = d)) 300s + print(a <- aggregate(aq, blocks, mean, na.rm = TRUE)) 300s + } 300s stars object with 2 dimensions and 1 attribute 300s attribute(s): 300s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 300s PM10 0 9.921 14.792 17.69728 21.992 274.333 157659 300s dimension(s): 300s from to offset delta refsys point 300s station 1 70 NA NA WGS 84 TRUE 300s time 1 4383 1998-01-01 1 days Date FALSE 300s values 300s station POINT (9.585911 53.67057),...,POINT (9.446661 49.24068) 300s time NULL 301s stars object with 2 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 301s PM10 1 11 15.57425 18.1715 22.17197 183.271 8429 301s dimension(s): 301s from to offset delta refsys point 301s geometry 1 9 NA NA WGS 84 FALSE 301s time 1 4383 1998-01-01 1 days Date FALSE 301s values 301s geometry POLYGON ((5.871619 47.269...,...,POLYGON ((11.98261 52.460... 301s time NULL 301s > 301s > # adapted from ?read_stars: 301s > m = array(1:720, dim = c(x = 10, y = 12, t = 6)) # named dim 301s > st = st_as_stars(m) 301s > attr(st, "dimensions")$y$delta = -1 301s > attr(st, "dimensions")$y$offset = 12 301s > tm = as.Date("2019-02-19") + 1:6 301s > st = st_set_crs(st_set_dimensions(st, 3, values = tm), 4326) 301s > 301s > tmp = tempfile(fileext = ".tif") 301s > write_stars(st, tmp) 301s > 301s > (red <- setNames(read_stars(tmp, RasterIO = list(nXOff = 1, nYOff = 1, nXsize = 10, nYSize = 12, 301s + nBufXSize = 2, nBufYSize = 2)), "foo")) 301s stars object with 3 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s foo 33 199.25 365.5 365.5 531.75 698 301s dimension(s): 301s from to offset delta refsys point x/y 301s x 1 2 0 5 WGS 84 FALSE [x] 301s y 1 2 12 -6 WGS 84 FALSE [y] 301s band 1 6 NA NA NA NA 301s > 301s > sfc = st_set_crs(st_as_sfc(red, as_points = FALSE), st_crs(st)) 301s > (a = aggregate(st, st_sf(a = 1, geom = sfc), mean)) 301s stars object with 2 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s A1 28 194.25 360.5 360.5 526.75 693 301s dimension(s): 301s from to offset delta refsys point 301s geom 1 4 NA NA WGS 84 FALSE 301s t 1 6 2019-02-20 1 days Date FALSE 301s values 301s geom POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 301s t NULL 301s > (a = aggregate(st, sfc, mean)) 301s stars object with 2 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s A1 28 194.25 360.5 360.5 526.75 693 301s dimension(s): 301s from to offset delta refsys point 301s geometry 1 4 NA NA WGS 84 FALSE 301s t 1 6 2019-02-20 1 days Date FALSE 301s values 301s geometry POLYGON ((0 12, 5 12, 5 6...,...,POLYGON ((5 6, 10 6, 10 0... 301s t NULL 301s > 301s > tm0 = as.Date("2019-02-19") + -1:8 301s > (a = aggregate(st, tm0, mean, na.rm = TRUE)) 301s stars object with 3 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 301s A1 1 180.75 360.5 360.5 540.25 720 480 301s dimension(s): 301s from to offset delta refsys point x/y 301s time 1 10 2019-02-18 1 days Date NA 301s x 1 10 0 1 WGS 84 FALSE [x] 301s y 1 12 12 -1 WGS 84 FALSE [y] 301s > (a = aggregate(st, "days", mean, na.rm = TRUE)) 301s stars object with 3 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s A1 1 180.75 360.5 360.5 540.25 720 301s dimension(s): 301s from to offset delta refsys point x/y 301s time 1 6 2019-02-20 1 days Date NA 301s x 1 10 0 1 WGS 84 FALSE [x] 301s y 1 12 12 -1 WGS 84 FALSE [y] 301s > yd = function(x) as.POSIXlt(x)$yday 301s > (a = aggregate(st, yd, mean, na.rm = TRUE)) 301s stars object with 3 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s A1 1 180.75 360.5 360.5 540.25 720 301s dimension(s): 301s from to offset delta refsys point values x/y 301s geometry 1 6 NA NA NA NA 50,...,55 301s x 1 10 0 1 WGS 84 FALSE NULL [x] 301s y 1 12 12 -1 WGS 84 FALSE NULL [y] 301s > 301s > # with "by" geometry not overlapping x 301s > pt = st_point(c(-10,-10)) 301s > (sfc = c(sfc, st_sfc(pt, crs = st_crs(sfc)))) 301s Geometry set for 5 features 301s Geometry type: GEOMETRY 301s Dimension: XY 301s Bounding box: xmin: -10 ymin: -10 xmax: 10 ymax: 12 301s Geodetic CRS: WGS 84 301s POLYGON ((0 12, 5 12, 5 6, 0 6, 0 12)) 301s POLYGON ((5 12, 10 12, 10 6, 5 6, 5 12)) 301s POLYGON ((0 6, 5 6, 5 0, 0 0, 0 6)) 301s POLYGON ((5 6, 10 6, 10 0, 5 0, 5 6)) 301s POINT (-10 -10) 301s > (a = aggregate(st, sfc, mean)) 301s stars object with 2 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 301s A1 28 194.25 360.5 360.5 526.75 693 6 301s dimension(s): 301s from to offset delta refsys point 301s geometry 1 5 NA NA WGS 84 FALSE 301s t 1 6 2019-02-20 1 days Date FALSE 301s values 301s geometry POLYGON ((0 12, 5 12, 5 6...,...,POINT (-10 -10) 301s t NULL 301s > (a = aggregate(st, st, mean)) 301s stars object with 2 dimensions and 1 attribute 301s attribute(s): 301s Min. 1st Qu. Median Mean 3rd Qu. Max. 301s A1 1 180.75 360.5 360.5 540.25 720 301s dimension(s): 301s from to offset delta refsys point 301s geometry 1 120 NA NA WGS 84 FALSE 301s t 1 6 2019-02-20 1 days Date FALSE 301s values 301s geometry POLYGON ((0 12, 1 12, 1 1...,...,POLYGON ((9 1, 10 1, 10 0... 301s t NULL 301s > 301s BEGIN TEST align.R 301s 301s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 301s Copyright (C) 2024 The R Foundation for Statistical Computing 301s Platform: arm-unknown-linux-gnueabihf (32-bit) 301s 301s R is free software and comes with ABSOLUTELY NO WARRANTY. 301s You are welcome to redistribute it under certain conditions. 301s Type 'license()' or 'licence()' for distribution details. 301s 301s R is a collaborative project with many contributors. 301s Type 'contributors()' for more information and 301s 'citation()' on how to cite R or R packages in publications. 301s 301s Type 'demo()' for some demos, 'help()' for on-line help, or 301s 'help.start()' for an HTML browser interface to help. 301s Type 'q()' to quit R. 301s 301s > suppressPackageStartupMessages(library(stars)) 302s > set.seed(1331) 302s > st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1) 302s Geometry set for 1 feature 302s Geometry type: POINT 302s Dimension: XY 302s Bounding box: xmin: 291430.8 ymin: 9111430 xmax: 291430.8 ymax: 9111430 302s POINT (291430.8 9111430) 302s Projected CRS: SIRGAS 2000 / UTM zone 25S 302s > b = st_buffer(st_sample(st_as_sfc(st_bbox(L7_ETMs)), 1), 335) 302s > bba = stars:::st_align(st_bbox(b), st_dimensions(L7_ETMs)) 302s > 302s > plot(L7_ETMs[,,,1], extent = st_buffer(b, 20), reset = FALSE, key.pos = NULL) 302s > plot(b, add = TRUE, col = NA, border = 'red') 302s > plot(st_as_sfc(st_bbox(b)), col = NA, border = 'red', add = TRUE) 302s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 302s > st_bbox(b) 302s xmin ymin xmax ymax 302s 297116.8 9119404.1 297786.8 9120074.1 302s > bba 302s xmin ymin xmax ymax 302s 297098.3 9119392.8 297810.8 9120076.8 302s > 302s > plot(L7_ETMs[,,,1], reset = FALSE, key.pos = NULL) 302s > plot(b, col = 'red', add = TRUE) 302s > plot(st_as_sfc(bba), col = NA, border = 'blue', add = TRUE) 302s > 302s > b0 = st_buffer(b, -100) 302s > L7 = st_as_stars(L7_ETMs)[b0][,,,1] |> st_normalize() 302s > bbb = stars:::st_align(st_bbox(b), st_dimensions(L7)) 302s > plot(L7, extent = st_buffer(b, 120), reset = FALSE, key.pos = NULL) 303s > plot(st_as_sfc(st_bbox(L7)), col = NA, border = 'black', add = TRUE) 303s > plot(st_as_sfc(bbb), col = NA, border = 'blue', add = TRUE) 303s > plot(b, col = NA, border = 'red', add = TRUE) 303s > 303s > all.equal(bbb, bba) 303s [1] TRUE 303s > 303s BEGIN TEST area.R 303s 303s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 303s Copyright (C) 2024 The R Foundation for Statistical Computing 303s Platform: arm-unknown-linux-gnueabihf (32-bit) 303s 303s R is free software and comes with ABSOLUTELY NO WARRANTY. 303s You are welcome to redistribute it under certain conditions. 303s Type 'license()' or 'licence()' for distribution details. 303s 303s R is a collaborative project with many contributors. 303s Type 'contributors()' for more information and 303s 'citation()' on how to cite R or R packages in publications. 303s 303s Type 'demo()' for some demos, 'help()' for on-line help, or 303s 'help.start()' for an HTML browser interface to help. 303s Type 'q()' to quit R. 303s 303s > suppressPackageStartupMessages(library(stars)) 303s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 303s > x = read_stars(tif) 303s > (a = st_area(x[,1:5,1:5])) 303s stars object with 2 dimensions and 1 attribute 303s attribute(s): 303s Min. 1st Qu. Median Mean 3rd Qu. Max. 303s area [m^2] 812.25 812.25 812.25 812.25 812.25 812.25 303s dimension(s): 303s from to offset delta refsys point x/y 303s x 1 5 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 303s y 1 5 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 303s > 303s > m = matrix(1:20, nrow = 5, ncol = 4) 303s > x = c(0, 0.5, 1, 2, 4, 5) # 6 numbers: boundaries! 303s > y = c(0.3, 0.5, 1, 2, 2.2) # 5 numbers: boundaries! 303s > (r = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 303s stars object with 2 dimensions and 1 attribute 303s attribute(s): 303s Min. 1st Qu. Median Mean 3rd Qu. Max. 303s m 1 5.75 10.5 10.5 15.25 20 303s dimension(s): 303s from to point values x/y 303s x 1 5 FALSE [0,0.5),...,[4,5) [x] 303s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 303s > # image(r, axes = TRUE, col = grey((1:20)/20)) 303s > (a = st_area(r)) 303s Missing coordinate reference system: assuming Cartesian coordinates 303s stars object with 2 dimensions and 1 attribute 303s attribute(s): 303s Min. 1st Qu. Median Mean 3rd Qu. Max. 303s area 0.1 0.2 0.325 0.475 0.5 2 303s dimension(s): 303s from to point values x/y 303s x 1 5 FALSE [0,0.5),...,[4,5) [x] 303s y 1 4 FALSE [0.3,0.5),...,[2,2.2) [y] 303s > #plot(a, axes = TRUE) 303s > 303s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 303s > if (s5p != "") { 303s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 303s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 303s + if (inherits(nit.c[[1]], "units")) 303s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 303s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 303s + st_crs(nit.c) = 4326 303s + print((a <- st_area(nit.c[,1:5,1:5]))) 303s + # plot(a, axes = TRUE, border = NA) 303s + } 303s > 303s BEGIN TEST crop.R 304s 304s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 304s Copyright (C) 2024 The R Foundation for Statistical Computing 304s Platform: arm-unknown-linux-gnueabihf (32-bit) 304s 304s R is free software and comes with ABSOLUTELY NO WARRANTY. 304s You are welcome to redistribute it under certain conditions. 304s Type 'license()' or 'licence()' for distribution details. 304s 304s R is a collaborative project with many contributors. 304s Type 'contributors()' for more information and 304s 'citation()' on how to cite R or R packages in publications. 304s 304s Type 'demo()' for some demos, 'help()' for on-line help, or 304s 'help.start()' for an HTML browser interface to help. 304s Type 'q()' to quit R. 304s 304s > suppressPackageStartupMessages(library(stars)) 304s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 304s > x = read_stars(tif) 304s > xy = structure(list(x = c(293253.999046018, 296400.196497684), y = c(9113801.64775462, 304s + 9111328.49619133)), .Names = c("x", "y")) 304s > pts = st_as_sf(data.frame(do.call(cbind, xy)), coords = c("x", "y"), crs = st_crs(x)) 304s > image(x, axes = TRUE) 304s > plot(st_as_sfc(st_bbox(pts)), col = NA, add = TRUE) 304s > 304s > bb = st_bbox(pts) 304s > (xx = x[bb]) 304s stars object with 3 dimensions and 1 attribute 304s attribute(s): 304s Min. 1st Qu. Median Mean 3rd Qu. Max. 304s L7_ETMs.tif 3 56 73 70.87303 89 255 304s dimension(s): 304s from to offset delta refsys point x/y 304s x 158 268 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 304s y 245 331 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 304s band 1 6 NA NA NA NA 304s > image(xx) 305s > plot(st_as_sfc(bb), add = TRUE, col = NA) 305s > st_contains(st_as_sfc(st_bbox(xx)), st_as_sfc(st_bbox(pts))) 305s Sparse geometry binary predicate list of length 1, where the predicate 305s was `contains' 305s 1: 1 305s > 305s > image(x) 305s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 305s > buf = st_buffer(st_sfc(pt, crs = st_crs(x)), 1500) 305s > plot(buf, add = TRUE) 305s > 305s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 305s + crs = st_crs(x)) 305s > image(x[buf]) 305s > plot(buf, add = TRUE, col = NA) 305s > image(x[buf,crop=FALSE]) 305s > plot(buf, add = TRUE, col = NA) 305s > 305s > plot(x, rgb = 1:3) 306s > 306s > # #638: 306s > l = st_as_stars(L7_ETMs) 306s > st_bbox(l) |> st_as_sfc() -> bb 306s > (bb + 1e6) |> st_set_crs(st_crs(l)) -> b 306s > st_crop(l, b) 306s stars object with 3 dimensions and 1 attribute 306s attribute(s): 306s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 306s L7_ETMs NA NA NA NaN NA NA 737088 306s dimension(s): 306s from to offset delta refsys point x/y 306s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 306s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 306s band 1 6 NA NA NA NA 306s > st_intersects(b, st_as_sfc(st_bbox(l))) |> as.matrix() 306s Warning message: 306s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 306s [,1] 306s [1,] FALSE 306s > (bb - 1e6) |> st_set_crs(st_crs(l)) -> b 306s > st_crop(l, b) 307s stars object with 3 dimensions and 1 attribute 307s attribute(s): 307s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 307s L7_ETMs NA NA NA NaN NA NA 737088 307s dimension(s): 307s Warning message: 307s In st_crop.stars(l, b) : st_crop: bounding boxes of x and y do not overlap 307s from to offset delta refsys point x/y 307s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 307s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 307s band 1 6 NA NA NA NA 307s > 307s BEGIN TEST curvilinear.R 307s 307s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 307s Copyright (C) 2024 The R Foundation for Statistical Computing 307s Platform: arm-unknown-linux-gnueabihf (32-bit) 307s 307s R is free software and comes with ABSOLUTELY NO WARRANTY. 307s You are welcome to redistribute it under certain conditions. 307s Type 'license()' or 'licence()' for distribution details. 307s 307s R is a collaborative project with many contributors. 307s Type 'contributors()' for more information and 307s 'citation()' on how to cite R or R packages in publications. 307s 307s Type 'demo()' for some demos, 'help()' for on-line help, or 307s 'help.start()' for an HTML browser interface to help. 307s Type 'q()' to quit R. 307s 307s > suppressPackageStartupMessages(library(stars)) 308s > 308s > s5p = system.file("sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", package = "starsdata") 308s > if (s5p != "") { 308s + 308s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 308s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 308s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 308s + lat = read_stars(lat_ds) 308s + lon = read_stars(lon_ds) 308s + nit = read_stars(nit_ds) 308s + nit[[1]][nit[[1]] > 9e+36] = NA 308s + 308s + ll = setNames(c(lon, lat), c("x", "y")) 308s + nit.c0 = st_as_stars(nit, curvilinear = ll) 308s + 308s + # more direct method: 308s + nit.c = read_stars(s5p, sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 308s + curvilinear = c("//PRODUCT/longitude", "//PRODUCT/latitude"), driver = NULL) 308s + if (inherits(nit.c[[1]], "units")) 308s + nit.c[[1]] = units::drop_units(nit.c[[1]]) 308s + nit.c[[1]][nit.c[[1]] > 9e+36] = NA 308s + all.equal(nit.c0, nit.c) 308s + st_crs(nit.c) = 4326 308s + print(nit.c) 308s + 308s + if (FALSE && capabilities()["png"]) { 308s + png("nit1.png", 800, 800) 308s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 308s + maps::map('world', add = TRUE, col = 'red') 308s + dev.off() 308s + 308s + png("nit2.png", 800, 800) 308s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 308s + maps::map('world', add = TRUE, col = 'red') 308s + dev.off() 308s + 308s + nit.c = stars:::st_downsample(nit.c, 8) 308s + print(nit.c) 308s + 308s + png("nit3.png", 800, 800) 308s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = TRUE, pch = 16) 308s + maps::map('world', add = TRUE, col = 'red') 308s + dev.off() 308s + 308s + png("nit4.png", 800, 800) 308s + plot(nit.c, breaks = "equal", reset = FALSE, axes = TRUE, as_points = FALSE, border = NA) 308s + maps::map('world', add = TRUE, col = 'red') 308s + dev.off() 308s + } 308s + 308s + } 308s > 308s BEGIN TEST datasets.R 308s 308s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 308s Copyright (C) 2024 The R Foundation for Statistical Computing 308s Platform: arm-unknown-linux-gnueabihf (32-bit) 308s 308s R is free software and comes with ABSOLUTELY NO WARRANTY. 308s You are welcome to redistribute it under certain conditions. 308s Type 'license()' or 'licence()' for distribution details. 308s 308s R is a collaborative project with many contributors. 308s Type 'contributors()' for more information and 308s 'citation()' on how to cite R or R packages in publications. 308s 308s Type 'demo()' for some demos, 'help()' for on-line help, or 308s 'help.start()' for an HTML browser interface to help. 308s Type 'q()' to quit R. 308s 308s > suppressPackageStartupMessages(library(stars)) 309s > bcsd_obs 309s stars_proxy object with 2 attributes in 2 file(s): 309s $foo 309s [1] "[...]/bcsd_obs_1999.nc:pr" 309s 309s $bar 309s [1] "[...]/bcsd_obs_1999.nc:tas" 309s 309s dimension(s): 309s from to offset delta refsys values x/y 309s x 1 81 -85 0.125 NA NULL [x] 309s y 1 33 37.12 -0.125 NA NULL [y] 309s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 309s > L7_ETMs 309s stars_proxy object with 1 attribute in 1 file(s): 309s $L7_ETMs 309s [1] "[...]/L7_ETMs.tif" 309s 309s dimension(s): 309s from to offset delta refsys point x/y 309s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 309s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 309s band 1 6 NA NA NA NA 309s > if (require(starsdata, quietly = TRUE)) { 309s + print(stars_sentinel2) 309s + } 309s > 309s BEGIN TEST dimensions.R 309s 309s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 309s Copyright (C) 2024 The R Foundation for Statistical Computing 309s Platform: arm-unknown-linux-gnueabihf (32-bit) 309s 309s R is free software and comes with ABSOLUTELY NO WARRANTY. 309s You are welcome to redistribute it under certain conditions. 309s Type 'license()' or 'licence()' for distribution details. 309s 309s R is a collaborative project with many contributors. 309s Type 'contributors()' for more information and 309s 'citation()' on how to cite R or R packages in publications. 309s 309s Type 'demo()' for some demos, 'help()' for on-line help, or 309s 'help.start()' for an HTML browser interface to help. 309s Type 'q()' to quit R. 309s 309s > # https://github.com/r-spatial/stars/issues/295 309s > suppressPackageStartupMessages(library(stars)) 310s > raw <- read_stars(system.file("nc/bcsd_obs_1999.nc", package = "stars")) 310s pr, tas, 310s > foo <- function(x, idx) stats::lowess(idx, x)$y 310s > 310s > timeline <- st_get_dimension_values(raw, "time") 310s > smooth = st_apply(raw, 310s + MARGIN = c("x", "y"), 310s + FUN = foo, 310s + idx = st_get_dimension_values(raw, "time") 310s + ) 310s > 310s > st_set_dimensions(smooth, 310s + which = "foo", 310s + values = st_get_dimension_values(raw, "time"), 310s + names = "time" 310s + ) 310s stars object with 3 dimensions and 2 attributes 310s attribute(s): 310s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 310s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 310s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 310s dimension(s): 310s from to offset delta refsys values x/y 310s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 310s x 1 81 -85 0.125 NA NULL [x] 310s y 1 33 37.12 -0.125 NA NULL [y] 310s > 310s > raw %>% 310s + st_apply(MARGIN = c("x", "y"), FUN = foo, idx = timeline) %>% 310s + st_set_dimensions("foo", st_dimensions(raw)["time"]) 310s stars object with 3 dimensions and 2 attributes 310s attribute(s): 310s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 310s pr 16.133519 70.371665 84.55774 87.72969 101.94830 278.6427 7116 310s tas -2.354958 9.632157 15.32671 14.61650 19.99331 24.7976 7116 310s dimension(s): 310s from to offset delta refsys values x/y 310s time 1 12 NA NA POSIXct 1999-01-31,...,1999-12-31 310s x 1 81 -85 0.125 NA NULL [x] 310s y 1 33 37.12 -0.125 NA NULL [y] 310s > 310s BEGIN TEST downsample.R 311s 311s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 311s Copyright (C) 2024 The R Foundation for Statistical Computing 311s Platform: arm-unknown-linux-gnueabihf (32-bit) 311s 311s R is free software and comes with ABSOLUTELY NO WARRANTY. 311s You are welcome to redistribute it under certain conditions. 311s Type 'license()' or 'licence()' for distribution details. 311s 311s R is a collaborative project with many contributors. 311s Type 'contributors()' for more information and 311s 'citation()' on how to cite R or R packages in publications. 311s 311s Type 'demo()' for some demos, 'help()' for on-line help, or 311s 'help.start()' for an HTML browser interface to help. 311s Type 'q()' to quit R. 311s 311s > library(stars) 311s Loading required package: abind 311s Loading required package: sf 311s Linking to GEOS 3.12.1, GDAL 3.8.5, PROJ 9.4.0; sf_use_s2() is TRUE 311s > m = matrix(1:121, 11, 11) 311s > m 311s [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] 311s [1,] 1 12 23 34 45 56 67 78 89 100 111 311s [2,] 2 13 24 35 46 57 68 79 90 101 112 311s [3,] 3 14 25 36 47 58 69 80 91 102 113 311s [4,] 4 15 26 37 48 59 70 81 92 103 114 311s [5,] 5 16 27 38 49 60 71 82 93 104 115 311s [6,] 6 17 28 39 50 61 72 83 94 105 116 311s [7,] 7 18 29 40 51 62 73 84 95 106 117 311s [8,] 8 19 30 41 52 63 74 85 96 107 118 311s [9,] 9 20 31 42 53 64 75 86 97 108 119 311s [10,] 10 21 32 43 54 65 76 87 98 109 120 311s [11,] 11 22 33 44 55 66 77 88 99 110 121 311s > s = st_as_stars(m) 311s > st_downsample(s, 1) 311s stars object with 2 dimensions and 1 attribute 311s attribute(s): 311s Min. 1st Qu. Median Mean 3rd Qu. Max. 311s A1 1 28.5 61 61 93.5 121 311s dimension(s): 311s from to offset delta point x/y 311s X1 1 6 0 2 FALSE [x] 311s X2 1 6 0 2 FALSE [y] 311s > st_downsample(s, 1)[[1]] 311s [,1] [,2] [,3] [,4] [,5] [,6] 311s [1,] 1 23 45 67 89 111 311s [2,] 3 25 47 69 91 113 311s [3,] 5 27 49 71 93 115 311s [4,] 7 29 51 73 95 117 311s [5,] 9 31 53 75 97 119 311s [6,] 11 33 55 77 99 121 311s > st_downsample(s, 1, offset = 1) 311s stars object with 2 dimensions and 1 attribute 311s attribute(s): 311s Min. 1st Qu. Median Mean 3rd Qu. Max. 311s A1 13 37 61 61 85 109 311s dimension(s): 311s from to offset delta point x/y 311s X1 1 5 1 2 FALSE [x] 311s X2 1 5 1 2 FALSE [y] 311s > st_downsample(s, 1, offset = 1)[[1]] 311s [,1] [,2] [,3] [,4] [,5] 311s [1,] 13 35 57 79 101 311s [2,] 15 37 59 81 103 311s [3,] 17 39 61 83 105 311s [4,] 19 41 63 85 107 311s [5,] 21 43 65 87 109 311s > st_downsample(s, 1, FUN = mean) 311s stars object with 2 dimensions and 1 attribute 311s attribute(s): 311s Min. 1st Qu. Median Mean 3rd Qu. Max. 311s A1 7 31 55 55 79 103 311s dimension(s): 311s from to offset delta point x/y 311s X1 1 5 0 2 FALSE [x] 311s X2 1 5 0 2 FALSE [y] 311s > st_downsample(s, 1, FUN = mean)[[1]] 311s [,1] [,2] [,3] [,4] [,5] 311s [1,] 7 29 51 73 95 311s [2,] 9 31 53 75 97 311s [3,] 11 33 55 77 99 311s [4,] 13 35 57 79 101 311s [5,] 15 37 59 81 103 311s > st_downsample(s, 1, offset = 1, FUN = mean) 311s stars object with 2 dimensions and 1 attribute 311s attribute(s): 311s Min. 1st Qu. Median Mean 3rd Qu. Max. 311s A1 19 43 67 67 91 115 311s dimension(s): 311s from to offset delta point x/y 311s X1 1 5 1 2 FALSE [x] 311s X2 1 5 1 2 FALSE [y] 311s > st_downsample(s, 1, offset = c(0,1), FUN = mean)[[1]] 311s [,1] [,2] [,3] [,4] [,5] 311s [1,] 18 40 62 84 106 311s [2,] 20 42 64 86 108 311s [3,] 22 44 66 88 110 311s [4,] 24 46 68 90 112 311s [5,] 26 48 70 92 114 311s > st_downsample(s, 1, offset = c(0,1)) 311s stars object with 2 dimensions and 1 attribute 311s attribute(s): 311s Min. 1st Qu. Median Mean 3rd Qu. Max. 311s A1 12 36.5 61 61 85.5 110 311s dimension(s): 311s from to offset delta point x/y 311s X1 1 6 0 2 FALSE [x] 311s X2 1 5 1 2 FALSE [y] 311s > st_downsample(s, 1, offset = c(0,1))[[1]] 311s [,1] [,2] [,3] [,4] [,5] 311s [1,] 12 34 56 78 100 311s [2,] 14 36 58 80 102 311s [3,] 16 38 60 82 104 311s [4,] 18 40 62 84 106 311s [5,] 20 42 64 86 108 311s [6,] 22 44 66 88 110 311s > 311s BEGIN TEST ee.R 311s 311s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 311s Copyright (C) 2024 The R Foundation for Statistical Computing 311s Platform: arm-unknown-linux-gnueabihf (32-bit) 311s 311s R is free software and comes with ABSOLUTELY NO WARRANTY. 311s You are welcome to redistribute it under certain conditions. 311s Type 'license()' or 'licence()' for distribution details. 311s 311s R is a collaborative project with many contributors. 311s Type 'contributors()' for more information and 311s 'citation()' on how to cite R or R packages in publications. 311s 311s Type 'demo()' for some demos, 'help()' for on-line help, or 311s 'help.start()' for an HTML browser interface to help. 311s Type 'q()' to quit R. 311s 311s > # show that extract with exact=TRUE equals st_interpolate_aw(), only much faster 311s > options(digits=15) 311s > suppressPackageStartupMessages(library(stars)) 312s > L = st_as_stars(L7_ETMs)[,,,1] 312s > set.seed(123432) 312s > st_bbox(L) |> 312s + st_as_sfc() |> 312s + st_centroid() |> 312s + st_buffer(50) |> 312s + st_sample(10) |> 312s + st_combine() |> 312s + st_convex_hull() -> ch 312s > if (interactive()) { 312s + plot(L, reset = FALSE) 312s + plot(ch, add = TRUE, border = 'red', col = NA) 312s + } 312s > if (FALSE) { 312s + e = st_extract(L, ch)[[1]] 312s + a = aggregate(L, ch, mean)[[1]] 312s + identical(e, a) # same code path 312s + ee = aggregate(L, ch, mean, exact = TRUE)[[1]] 312s + all.equal(e, ee) 312s + aw = suppressWarnings(st_interpolate_aw(L, ch, extensive = FALSE)$V1) 312s + all.equal(as.vector(ee), aw) 312s + ee0 = st_extract(L, ch, exact = TRUE)[[1]] 312s + all.equal(ee0, ee) # ?? 312s + } 312s > 312s BEGIN TEST extract.R 312s 312s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 312s Copyright (C) 2024 The R Foundation for Statistical Computing 312s Platform: arm-unknown-linux-gnueabihf (32-bit) 312s 312s R is free software and comes with ABSOLUTELY NO WARRANTY. 312s You are welcome to redistribute it under certain conditions. 312s Type 'license()' or 'licence()' for distribution details. 312s 312s R is a collaborative project with many contributors. 312s Type 'contributors()' for more information and 312s 'citation()' on how to cite R or R packages in publications. 312s 312s Type 'demo()' for some demos, 'help()' for on-line help, or 312s 'help.start()' for an HTML browser interface to help. 312s Type 'q()' to quit R. 312s 312s > # Create 'stars' object 312s > set.seed(1331) 312s > suppressPackageStartupMessages(library(stars)) 313s > volcano = rbind(volcano, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA) # add NA rows 313s > d = st_dimensions(x = 1:ncol(volcano), y = 1:nrow(volcano)) 313s > (r = st_as_stars(t(volcano))) 313s stars object with 2 dimensions and 1 attribute 313s attribute(s): 313s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 313s A1 94 108 124 130.1879 150 195 732 313s dimension(s): 313s from to offset delta point x/y 313s X1 1 61 0 1 FALSE [x] 313s X2 1 99 0 1 FALSE [y] 313s > r = st_set_dimensions(r, 1, offset = 0, delta = 1) 313s > r = st_set_dimensions(r, 2, offset = nrow(volcano), delta = -1) 313s > 313s > # Create points 313s > pnt = st_sample(st_as_sfc(st_bbox(r)), 100) 313s > pnt = st_as_sf(pnt) 313s > 313s > # Extract - 'st_join' 313s > x = st_join(pnt, st_as_sf(r)) 313s > 313s > # Extract - 'st_extract' 313s > y = st_extract(r, pnt) 313s > 313s > # check there are NA's: 313s > any(is.na(x)) 313s [1] TRUE 313s > # Compare 313s > all.equal(x$A1, y[[1]]) 313s [1] TRUE 313s > 313s > ################################################ 313s > if (FALSE) { 313s + 313s + ## tic: segfaults 313s + # check equal results with stars_proxy: 313s + #x = st_extract(stars:::st_as_stars_proxy(r), pnt) 313s + #all.equal(x$A1, y[[1]]) 313s + #all.equal(x, y) 313s + 313s + r = c(r, 2*r, 10*r) 313s + x = st_join(pnt, st_as_sf(r)) 313s + y = st_as_sf(st_extract(r, pnt)) 313s + all.equal(x, y) 313s + 313s + ## tic: segfaults 313s + #x = st_extract(stars:::st_as_stars_proxy(merge(r)), pnt) 313s + #all.equal(st_as_sf(x), y) 313s + 313s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 313s + xp = read_stars(tif, proxy = TRUE) 313s + xm = read_stars(tif, proxy = FALSE) 313s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 313s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 313s + em = st_extract(xm, pts) 313s + if (utils::packageVersion("sf") >= "0.9-7") { 313s + ep = st_extract(xp, pts) 313s + print(all.equal(ep, em, check.attributes = TRUE)) 313s + } 313s + 313s + # two-attribute objects: 313s + library(stars) 313s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 313s + xp = read_stars(c(tif, tif), proxy = TRUE) 313s + xm = read_stars(c(tif, tif), proxy = FALSE) 313s + pts = st_sample(st_as_sfc(st_bbox(xp)), 10) 313s + pts = c(pts, st_as_sfc("POINT(0 0)"), pts) 313s + em = st_extract(xm, pts) 313s + if (utils::packageVersion("sf") >= "0.9-7") { 313s + ep = st_extract(xp, pts) 313s + print(all.equal(ep, em, check.attributes = TRUE)) 313s + } 313s + 313s + # single-attribute, single raster objects: 313s + tif1 = paste0(tempfile(), ".tif") 313s + write_stars(xm[1,,,1], "x.tif") 313s + xp = read_stars("x.tif", proxy = TRUE) 313s + xm = read_stars("x.tif", proxy = FALSE) 313s + em = st_extract(xm, pts) 313s + if (utils::packageVersion("sf") >= "0.9-7") { 313s + ep = st_extract(xp, pts) 313s + print(all.equal(ep, em, check.attributes = TRUE)) 313s + } 313s + 313s + # multiple-file attributes: 313s + x = c( 313s + "avhrr-only-v2.19810901.nc", 313s + "avhrr-only-v2.19810902.nc", 313s + "avhrr-only-v2.19810903.nc", 313s + "avhrr-only-v2.19810904.nc", 313s + "avhrr-only-v2.19810905.nc", 313s + "avhrr-only-v2.19810906.nc", 313s + "avhrr-only-v2.19810907.nc", 313s + "avhrr-only-v2.19810908.nc", 313s + "avhrr-only-v2.19810909.nc" 313s + ) 313s + file_list = system.file(paste0("netcdf/", x), package = "starsdata") 313s + if (!identical(file_list, "")) { 313s + y = read_stars(file_list, quiet = TRUE) 313s + print(y) 313s + st_crs(y) = "OGC:CRS84" 313s + pts = st_sample(st_as_sfc(st_bbox(y)), 10) 313s + em = st_extract(y, pts) 313s + 313s + (y = read_stars(file_list, quiet = TRUE, proxy = TRUE)) 313s + print(y) 313s + st_crs(y) = "OGC:CRS84" 313s + if (utils::packageVersion("sf") >= "0.9-7") { 313s + ep = st_extract(y, pts) 313s + print(all.equal(em, ep)) 313s + } 313s + } 313s + 313s + # nearest & bilinear comparison: 313s + if (utils::packageVersion("sf") >= "0.9-7") { 313s + set.seed(12331) 313s + s = st_as_stars(matrix(rnorm(16), 4)) 313s + pts = st_sample(st_as_sfc(st_bbox(s)), 10000, type = "regular") 313s + s1 = st_extract(s, pts, bilinear = FALSE) 313s + s2 = st_extract(s, pts, bilinear = TRUE) 313s + s1$s2 = s2[[1]] 313s + names(s1)[c(1,3)] = c("nearest", "bilinear") 313s + print(s1[sample(10000, 5),]) 313s + } 313s + } 313s > 313s BEGIN TEST gridtypes.R 313s 313s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 313s Copyright (C) 2024 The R Foundation for Statistical Computing 313s Platform: arm-unknown-linux-gnueabihf (32-bit) 313s 313s R is free software and comes with ABSOLUTELY NO WARRANTY. 313s You are welcome to redistribute it under certain conditions. 313s Type 'license()' or 'licence()' for distribution details. 313s 313s R is a collaborative project with many contributors. 313s Type 'contributors()' for more information and 313s 'citation()' on how to cite R or R packages in publications. 313s 313s Type 'demo()' for some demos, 'help()' for on-line help, or 313s 'help.start()' for an HTML browser interface to help. 313s Type 'q()' to quit R. 313s 313s > suppressPackageStartupMessages(library(stars)) 314s > 314s > # regular, but not spatial: 314s > d = st_dimensions(a = 1:3, b = 1:3, band = c("foo", "bar")) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values 314s a 1 3 1 1 FALSE NULL 314s b 1 3 1 1 FALSE NULL 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s a b band X 314s 1 1 1 foo 1 314s 2 2 1 foo 2 314s 3 3 1 foo 3 314s 4 1 2 foo 4 314s > try(x <- st_bbox(st)) # error 314s Error in st_bbox.dimensions(st_dimensions(obj), ...) : 314s dimensions table does not have x & y, nor an sfc dimension 314s > 314s > # regular, geotransform: 314s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 1 1 FALSE NULL [x] 314s y 1 3 1 1 FALSE NULL [y] 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 1.5 1.5 foo 1 314s 2 2.5 1.5 foo 2 314s 3 3.5 1.5 foo 3 314s 4 1.5 2.5 foo 4 314s > as.data.frame(st, add_max=TRUE)[1:4,] 314s x y band x_max y_max X 314s 1 1 1 foo 2 2 1 314s 2 2 1 foo 3 2 2 314s 3 3 1 foo 4 2 3 314s 4 1 2 foo 2 3 4 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 1 1 4 4 314s > 314s > # rectilinear with offset given: 314s > xd = c(1, 2, 4) 314s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 NA NA FALSE [1,2), [2,4), [4,6) [x] 314s y 1 3 1 1 FALSE NULL [y] 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 1.5 1.5 foo 1 314s 2 3.0 1.5 foo 2 314s 3 5.0 1.5 foo 3 314s 4 1.5 2.5 foo 4 314s > as.data.frame(st, add_max=TRUE)[1:4,] 314s x y band x_max y_max X 314s 1 1 1 foo 2 2 1 314s 2 2 1 foo 4 2 2 314s 3 4 1 foo 6 2 3 314s 4 1 2 foo 2 3 4 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 1 1 6 4 314s > 314s > # rectilinear with midpoints given: 314s > xd = c(1, 2, 4) 314s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 NA NA FALSE [0.5,1.5), [1.5,3.0), [3.0,5.0) [x] 314s y 1 3 0.5 1 FALSE NULL [y] 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 1.00 1 foo 1 314s 2 2.25 1 foo 2 314s 3 4.00 1 foo 3 314s 4 1.00 2 foo 4 314s > as.data.frame(st, add_max=TRUE)[1:4,] 314s x y band x_max y_max X 314s 1 0.5 0.5 foo 1.5 1.5 1 314s 2 1.5 0.5 foo 3.0 1.5 2 314s 3 3.0 0.5 foo 5.0 1.5 3 314s 4 0.5 1.5 foo 1.5 2.5 4 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 0.5 0.5 5.0 3.5 314s > 314s > # rectilinear with midpoints given, point support 314s > xd = c(1, 2, 4) 314s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), cell_midpoints = TRUE, point = TRUE) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 NA NA TRUE 1, 2, 4 [x] 314s y 1 3 0.5 1 TRUE NULL [y] 314s band 1 2 NA NA TRUE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 1 1 foo 1 314s 2 2 1 foo 2 314s 3 4 1 foo 3 314s 4 1 2 foo 4 314s > as.data.frame(st, add_max=TRUE)[1:4,] 314s x y band x_max y_max X 314s 1 1 0.5 foo 1 1.5 1 314s 2 2 0.5 foo 2 1.5 2 314s 3 4 0.5 foo 4 1.5 3 314s 4 1 1.5 foo 1 2.5 4 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 1.0 0.5 4.0 3.5 314s > 314s > # rectilinear with start/end given: 314s > #xd = stars:::make_intervals(start = c(1,2,4), end = c(2, 4, 8)) 314s > xd = c(1, 2, 4, 8) # one more than dim of the data array 314s > d = st_dimensions(x = xd, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y")) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 NA NA FALSE [1,2), [2,4), [4,8) [x] 314s y 1 3 1 1 FALSE NULL [y] 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 1.5 1.5 foo 1 314s 2 3.0 1.5 foo 2 314s 3 6.0 1.5 foo 3 314s 4 1.5 2.5 foo 4 314s > as.data.frame(st, add_max=TRUE)[1:4,] 314s x y band x_max y_max X 314s 1 1 1 foo 2 2 1 314s 2 2 1 foo 4 2 2 314s 3 4 1 foo 8 2 3 314s 4 1 2 foo 2 3 4 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 1 1 8 4 314s > 314s > # with sfc: 314s > sfc = st_sfc(st_point(0:1), st_point(2:1), st_point(4:3)) 314s > d = st_dimensions(x = sfc, y = 1:3, band = c("foo", "bar")) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values 314s x 1 3 NA NA TRUE POINT (0 1),...,POINT (4 3) 314s y 1 3 1 1 FALSE NULL 314s band 1 2 NA NA FALSE foo, bar 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y band X 314s 1 POINT (0 1) 1 foo 1 314s 2 POINT (2 1) 1 foo 2 314s 3 POINT (4 3) 1 foo 3 314s 4 POINT (0 1) 2 foo 4 314s > st_as_sf(st, long = TRUE)[1:4,] 314s Simple feature collection with 4 features and 3 fields 314s Geometry type: POINT 314s Dimension: XY 314s Bounding box: xmin: 0 ymin: 1 xmax: 4 ymax: 3 314s Error in st_coordinates.stars(x, add_max = add_max, center = center, ...) : 314s add_max will not work for rotated/shared rasters 314s CRS: NA 314s y band X x 314s 1 1 foo 1 POINT (0 1) 314s 2 1 foo 2 POINT (2 1) 314s 3 1 foo 3 POINT (4 3) 314s 4 2 foo 4 POINT (0 1) 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 0 1 4 3 314s > 314s > # rotated/sheared: 314s > d = st_dimensions(x = 1:3, y = 1:3, band = c("foo", "bar"), .raster = c("x", "y"), affine = c(0.2, -0.2)) 314s > (st = st_as_stars(array(1:18, c(3,3,2)), dimension = d)) 314s stars object with 3 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 5.25 9.5 9.5 13.75 18 314s dimension(s): 314s from to offset delta point values x/y 314s x 1 3 1 1 FALSE NULL [x] 314s y 1 3 1 1 FALSE NULL [y] 314s band 1 2 NA NA FALSE foo, bar 314s sheared raster with parameters: 0.2 -0.2 314s > as.data.frame(st, add_max=FALSE)[1:4,] 314s x y X 314s 1 1.6 1.4 1 314s 2 2.6 1.2 2 314s 3 3.6 1.0 3 314s 4 1.8 2.4 4 314s > try(as.data.frame(st, add_max=TRUE)[1:4,]) # errors 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 1.0 0.4 4.6 4.0 314s > 314s > # curvilinear: 314s > set.seed(13531) 314s > lon = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 314s > lat = st_as_stars(matrix(signif(runif(9), 2), 3, 3)) 314s > ll = setNames(c(lon, lat), c("lon", "lat")) 314s > d = st_dimensions(lon = 1:3, lat = 1:3) 314s > a = st_as_stars(list(X = array(1:9, c(3,3))), dimensions = d) 314s > (st = st_as_stars(a, curvilinear = ll)) 314s stars object with 2 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s X 1 3 5 5 7 9 314s dimension(s): 314s from to refsys point values x/y 314s lon 1 3 WGS 84 (CRS84) FALSE [3x3] 0.03,...,0.89 [x] 314s lat 1 3 WGS 84 (CRS84) FALSE [3x3] 0.021,...,0.89 [y] 314s curvilinear grid 314s > as.data.frame(st) 314s lon lat X 314s 1 0.89 0.250 1 314s 2 0.64 0.510 2 314s 3 0.30 0.670 3 314s 4 0.69 0.890 4 314s 5 0.47 0.890 5 314s 6 0.26 0.190 6 314s 7 0.57 0.021 7 314s 8 0.27 0.220 8 314s 9 0.03 0.340 9 314s > st_bbox(st) 314s xmin ymin xmax ymax 314s 0.030 0.021 0.890 0.890 314s > 314s > # time regular: 314s > t = as.Date("2019-01-20") + 0:3 314s > d = st_dimensions(t, sfc) 314s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 314s stars object with 2 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s a 1 3.75 6.5 6.5 9.25 12 314s dimension(s): 314s from to offset delta refsys point values 314s X1 1 4 2019-01-20 1 days Date FALSE NULL 314s X2 1 3 NA NA NA TRUE POINT (0 1),...,POINT (4 3) 314s > as.data.frame(st) 314s X1 X2 a 314s 1 2019-01-20 POINT (0 1) 1 314s 2 2019-01-21 POINT (0 1) 2 314s 3 2019-01-22 POINT (0 1) 3 314s 4 2019-01-23 POINT (0 1) 4 314s 5 2019-01-20 POINT (2 1) 5 314s 6 2019-01-21 POINT (2 1) 6 314s 7 2019-01-22 POINT (2 1) 7 314s 8 2019-01-23 POINT (2 1) 8 314s 9 2019-01-20 POINT (4 3) 9 314s 10 2019-01-21 POINT (4 3) 10 314s 11 2019-01-22 POINT (4 3) 11 314s 12 2019-01-23 POINT (4 3) 12 314s > 314s > # time, rectilinear 314s > t = as.Date("2019-01-20") + c(0, 2, 3, 10) 314s > d = st_dimensions(t, sfc) 314s > (st = st_as_stars(list(a = matrix(1:12, 4, 3)), dimensions = d)) 314s stars object with 2 dimensions and 1 attribute 314s attribute(s): 314s Min. 1st Qu. Median Mean 3rd Qu. Max. 314s a 1 3.75 6.5 6.5 9.25 12 314s dimension(s): 314s from to refsys point values 314s X1 1 4 Date FALSE 2019-01-20,...,2019-01-30 314s X2 1 3 NA TRUE POINT (0 1),...,POINT (4 3) 314s > as.data.frame(st) 314s X1 X2 a 314s 1 2019-01-20 POINT (0 1) 1 314s 2 2019-01-22 POINT (0 1) 2 314s 3 2019-01-23 POINT (0 1) 3 314s 4 2019-01-30 POINT (0 1) 4 314s 5 2019-01-20 POINT (2 1) 5 314s 6 2019-01-22 POINT (2 1) 6 314s 7 2019-01-23 POINT (2 1) 7 314s 8 2019-01-30 POINT (2 1) 8 314s 9 2019-01-20 POINT (4 3) 9 314s 10 2019-01-22 POINT (4 3) 10 314s 11 2019-01-23 POINT (4 3) 11 314s 12 2019-01-30 POINT (4 3) 12 314s > 314s BEGIN TEST mdim.R 314s 314s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 314s Copyright (C) 2024 The R Foundation for Statistical Computing 314s Platform: arm-unknown-linux-gnueabihf (32-bit) 314s 314s R is free software and comes with ABSOLUTELY NO WARRANTY. 314s You are welcome to redistribute it under certain conditions. 314s Type 'license()' or 'licence()' for distribution details. 314s 314s R is a collaborative project with many contributors. 314s Type 'contributors()' for more information and 314s 'citation()' on how to cite R or R packages in publications. 314s 314s Type 'demo()' for some demos, 'help()' for on-line help, or 314s 'help.start()' for an HTML browser interface to help. 314s Type 'q()' to quit R. 314s 314s > Sys.setenv(TZ="") 314s > suppressPackageStartupMessages(library(stars)) 315s > matrix(1:4,2) 315s [,1] [,2] 315s [1,] 1 3 315s [2,] 2 4 315s > m = matrix(1:4,2) 315s > s = st_as_stars(m) 315s > 315s > s = st_set_dimensions(s, st_dimensions(s), xy = NULL) 315s > sfc = st_sfc(st_point(0:1), st_point(3:2)) 315s > s = st_set_dimensions(s, 1, sfc) |> st_set_crs(4326) 315s > tm = as.POSIXct("2023-03-04 12:35") + c(0, 3600) 315s > (s = st_set_dimensions(s, 2, tm)) 315s stars object with 2 dimensions and 1 attribute 315s attribute(s): 315s Min. 1st Qu. Median Mean 3rd Qu. Max. 315s A1 1 1.75 2.5 2.5 3.25 4 315s dimension(s): 315s from to offset delta refsys point 315s X1 1 2 NA NA WGS 84 TRUE 315s X2 1 2 2023-03-04 12:35:00 Universal 1 hours POSIXct FALSE 315s values 315s X1 POINT (0 1), POINT (3 2) 315s X2 NULL 315s > f = tempfile(fileext = ".nc") 315s > if (compareVersion(sf_extSoftVersion()["GDAL"], "3.4.0") > -1) { 315s + write_mdim(s, f, as_float = FALSE) 315s + s2 = read_mdim(f) 315s + print(s2) 315s + print(all.equal(s, s2, check.attributes = FALSE)) 315s + print(all.equal(s, s2)) 315s + 315s + st_crs(sfc) = st_crs(s2) 315s + st_crs(s) = st_crs(s2) 315s + tm = as.Date("2023-02-25") + 0:1 315s + sd = st_set_dimensions(s, 2, tm) 315s + print(sd) 315s + sd = st_set_dimensions(sd, 1, sfc) 315s + print(sd) 315s + f = tempfile(fileext = ".nc") 315s + write_mdim(sd, f) 315s + sd2 = read_mdim(f) 315s + print(sd2) 315s + print(all.equal(sd, sd2, check.attributes = FALSE)) 315s + print(all.equal(sd, sd2)) 315s + } 315s stars object with 2 dimensions and 1 attribute 315s attribute(s): 315s Min. 1st Qu. Median Mean 3rd Qu. Max. 315s A1 1 1.75 2.5 2.5 3.25 4 315s dimension(s): 315s from to offset delta refsys point 315s X1 1 2 NA NA WGS 84 TRUE 315s X2 1 2 2023-03-04 12:35:00 UTC 1 hours POSIXct NA 315s values 315s X1 POINT (0 1), POINT (3 2) 315s X2 NULL 315s [1] TRUE 315s [1] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"input\": 1 string mismatch >" 315s [2] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"refsys\": Component \"wkt\": 1 string mismatch >" 315s [3] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"input\": 1 string mismatch > >" 315s [4] "Attributes: < Component \"dimensions\": Component \"X1\": Component \"values\": Attributes: < Component \"crs\": Component \"wkt\": 1 string mismatch > >" 315s [5] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"offset\": 'tzone' attributes are inconsistent ('' and 'UTC') >" 315s [6] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 315s stars object with 2 dimensions and 1 attribute 315s attribute(s): 315s Min. 1st Qu. Median Mean 3rd Qu. Max. 315s A1 1 1.75 2.5 2.5 3.25 4 315s dimension(s): 315s from to offset delta refsys point values 315s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 315s X2 1 2 2023-02-25 1 days Date FALSE NULL 315s stars object with 2 dimensions and 1 attribute 315s attribute(s): 315s Min. 1st Qu. Median Mean 3rd Qu. Max. 315s A1 1 1.75 2.5 2.5 3.25 4 315s dimension(s): 315s from to offset delta refsys point values 315s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 315s X2 1 2 2023-02-25 1 days Date FALSE NULL 315s stars object with 2 dimensions and 1 attribute 315s attribute(s): 315s Min. 1st Qu. Median Mean 3rd Qu. Max. 315s A1 1 1.75 2.5 2.5 3.25 4 315s dimension(s): 315s from to offset delta refsys point values 315s X1 1 2 NA NA WGS 84 TRUE POINT (0 1), POINT (3 2) 315s X2 1 2 2023-02-25 1 days Date NA NULL 315s [1] TRUE 315s [1] "Attributes: < Component \"dimensions\": Component \"X2\": Component \"point\": 'is.NA' value mismatch: 1 in current 0 in target >" 315s > 315s Warning messages: 315s 1: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 315s GDAL Error 6: SetIndexingVariable() not implemented 315s 2: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 315s GDAL Error 6: SetIndexingVariable() not implemented 315s 3: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 315s GDAL Error 6: SetIndexingVariable() not implemented 315s 4: In CPL_write_mdim(file, driver, dimx, cdl, wkt, xy, root_group_options, : 315s GDAL Error 6: SetIndexingVariable() not implemented 315s BEGIN TEST nc.R 315s 315s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 315s Copyright (C) 2024 The R Foundation for Statistical Computing 315s Platform: arm-unknown-linux-gnueabihf (32-bit) 315s 315s R is free software and comes with ABSOLUTELY NO WARRANTY. 315s You are welcome to redistribute it under certain conditions. 315s Type 'license()' or 'licence()' for distribution details. 315s 315s R is a collaborative project with many contributors. 315s Type 'contributors()' for more information and 315s 'citation()' on how to cite R or R packages in publications. 315s 315s Type 'demo()' for some demos, 'help()' for on-line help, or 315s 'help.start()' for an HTML browser interface to help. 315s Type 'q()' to quit R. 315s 315s > # examples with the sf::nc polygon dataset NOT ABOUT NETCDF's, see e.g. stars.R netcdf.R 315s > suppressPackageStartupMessages(library(sf)) 316s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 316s > m = st_set_geometry(nc, NULL) 316s > n = as.matrix(m[c("BIR74", "SID74", "NWBIR74", "BIR79", "SID79", "NWBIR79")]) 316s > dim(n) = c(county = 100, var = 3, year = 2) 316s > dimnames(n) = list(county = nc$NAME, var = c("BIR", "SID", "NWBIR"), year = c(1974, 1979)) 316s > suppressPackageStartupMessages(library(stars)) 316s > (st = st_as_stars(pop = n)) 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 8 538 1657.032 1784 30757 316s dimension(s): 316s from to values 316s county 1 100 Ashe,...,Brunswick 316s var 1 3 BIR , SID , NWBIR 316s year 1 2 1974, 1979 316s > foo <- st %>% st_set_dimensions(1, st_geometry(nc)) # %>% st_set_dimensions(3, c(1974, 1979)) 316s > st %>% st_set_dimensions(1, st_geometry(nc)) %>% st_set_dimensions(names = c("geometries", "var", "year")) 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 8 538 1657.032 1784 30757 316s dimension(s): 316s from to refsys point 316s geometries 1 100 NAD27 FALSE 316s var 1 3 NA NA 316s year 1 2 NA NA 316s values 316s geometries MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s var BIR , SID , NWBIR 316s year 1974, 1979 316s > foo 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 8 538 1657.032 1784 30757 316s dimension(s): 316s from to refsys point 316s county 1 100 NAD27 FALSE 316s var 1 3 NA NA 316s year 1 2 NA NA 316s values 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s var BIR , SID , NWBIR 316s year 1974, 1979 316s > st_bbox(foo) 316s xmin ymin xmax ymax 316s -84.32385 33.88199 -75.45698 36.58965 316s > (x = st_as_sf(foo)) 316s Simple feature collection with 100 features and 6 fields 316s Geometry type: MULTIPOLYGON 316s Dimension: XY 316s Bounding box: xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965 316s Geodetic CRS: NAD27 316s First 10 features: 316s BIR.1974 SID.1974 NWBIR.1974 BIR.1979 SID.1979 NWBIR.1979 316s 1 1091 1 10 1364 0 19 316s 2 487 0 10 542 3 12 316s 3 3188 5 208 3616 6 260 316s 4 508 1 123 830 2 145 316s 5 1421 9 1066 1606 3 1197 316s 6 1452 7 954 1838 5 1237 316s 7 286 0 115 350 2 139 316s 8 420 0 254 594 2 371 316s 9 968 4 748 1190 2 844 316s 10 1612 1 160 2038 5 176 316s county 316s 1 MULTIPOLYGON (((-81.47276 3... 316s 2 MULTIPOLYGON (((-81.23989 3... 316s 3 MULTIPOLYGON (((-80.45634 3... 316s 4 MULTIPOLYGON (((-76.00897 3... 316s 5 MULTIPOLYGON (((-77.21767 3... 316s 6 MULTIPOLYGON (((-76.74506 3... 316s 7 MULTIPOLYGON (((-76.00897 3... 316s 8 MULTIPOLYGON (((-76.56251 3... 316s 9 MULTIPOLYGON (((-78.30876 3... 316s 10 MULTIPOLYGON (((-80.02567 3... 316s > frac = function(x) x[2] / x[1] 316s > frac2 = function(x) c(sidsr = x[2] / x[1], nwbr = x[3] / x[1]) 316s > frac2an = function(x) c(x[2] / x[1], x[3] / x[1]) 316s > st_apply(foo, c(1,3), frac) 316s stars object with 2 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s frac 0 0.001197874 0.001930504 0.002042241 0.002599348 0.00955414 316s dimension(s): 316s from to refsys point 316s county 1 100 NAD27 FALSE 316s year 1 2 NA NA 316s values 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s year 1974, 1979 316s > st_apply(foo, c(1,3), frac2) 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 316s dimension(s): 316s from to refsys point 316s frac2 1 2 NA NA 316s county 1 100 NAD27 FALSE 316s year 1 2 NA NA 316s values 316s frac2 sidsr, nwbr 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s year 1974, 1979 316s > st_apply(foo, c(1,3), frac2an) 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 316s dimension(s): 316s from to refsys point 316s frac2an 1 2 NA NA 316s county 1 100 NAD27 FALSE 316s year 1 2 NA NA 316s values 316s frac2an NULL 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s year 1974, 1979 316s > library(abind) 316s > (x = aperm(st_apply(foo, c(1,3), frac2), c(2,3,1))) 316s stars object with 3 dimensions and 1 attribute 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s pop 0 0.001923331 0.005119673 0.1567576 0.3065298 0.7727273 316s dimension(s): 316s from to refsys point 316s county 1 100 NAD27 FALSE 316s year 1 2 NA NA 316s frac2 1 2 NA NA 316s values 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s year 1974, 1979 316s frac2 sidsr, nwbr 316s > y = aperm(st_apply(foo, c(1,3), frac2), c("county","year","frac2")) 316s > all.equal(st_dimensions(x), st_dimensions(y)) 316s [1] TRUE 316s > 316s > split(foo, 2) 316s stars object with 2 dimensions and 3 attributes 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s BIR 248 1176.75 2265 3761.770 4450.75 30757 316s SID 0 2.00 5 7.515 9.00 57 316s NWBIR 1 206.00 742 1201.810 1315.75 11631 316s dimension(s): 316s from to refsys point 316s county 1 100 NAD27 FALSE 316s year 1 2 NA NA 316s values 316s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 316s year 1974, 1979 316s > split(foo, 3) 316s stars object with 2 dimensions and 2 attributes 316s attribute(s): 316s Min. 1st Qu. Median Mean 3rd Qu. Max. 316s 1974 0 8 501.5 1452.367 1580.50 21588 316s 1979 0 9 614.0 1861.697 2040.25 30757 316s dimension(s): 317s from to refsys point 317s county 1 100 NAD27 FALSE 317s var 1 3 NA NA 317s values 317s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 317s var BIR , SID , NWBIR 317s > 317s > st_crs(foo) 317s Coordinate Reference System: 317s User input: NAD27 317s wkt: 317s GEOGCRS["NAD27", 317s DATUM["North American Datum 1927", 317s ELLIPSOID["Clarke 1866",6378206.4,294.978698213898, 317s LENGTHUNIT["metre",1]]], 317s PRIMEM["Greenwich",0, 317s ANGLEUNIT["degree",0.0174532925199433]], 317s CS[ellipsoidal,2], 317s AXIS["geodetic latitude (Lat)",north, 317s ORDER[1], 317s ANGLEUNIT["degree",0.0174532925199433]], 317s AXIS["geodetic longitude (Lon)",east, 317s ORDER[2], 317s ANGLEUNIT["degree",0.0174532925199433]], 317s USAGE[ 317s SCOPE["Geodesy."], 317s AREA["North and central America: Antigua and Barbuda - onshore. Bahamas - onshore plus offshore over internal continental shelf only. Belize - onshore. British Virgin Islands - onshore. Canada onshore - Alberta, British Columbia, Manitoba, New Brunswick, Newfoundland and Labrador, Northwest Territories, Nova Scotia, Nunavut, Ontario, Prince Edward Island, Quebec, Saskatchewan and Yukon - plus offshore east coast. Cuba - onshore and offshore. El Salvador - onshore. Guatemala - onshore. Honduras - onshore. Panama - onshore. Puerto Rico - onshore. Mexico - onshore plus offshore east coast. Nicaragua - onshore. United States (USA) onshore and offshore - Alabama, Alaska, Arizona, Arkansas, California, Colorado, Connecticut, Delaware, Florida, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Louisiana, Maine, Maryland, Massachusetts, Michigan, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Hampshire, New Jersey, New Mexico, New York, North Carolina, North Dakota, Ohio, Oklahoma, Oregon, Pennsylvania, Rhode Island, South Carolina, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin and Wyoming - plus offshore . US Virgin Islands - onshore."], 317s BBOX[7.15,167.65,83.17,-47.74]], 317s ID["EPSG",4267]] 317s > plot(foo) 317s > 317s > # subset vector cube: 317s > foo[nc[1]] 317s stars object with 3 dimensions and 1 attribute 317s attribute(s): 317s Min. 1st Qu. Median Mean 3rd Qu. Max. 317s pop 0 8 538 1657.032 1784 30757 317s dimension(s): 317s from to refsys point 317s county 1 100 NAD27 FALSE 317s var 1 3 NA NA 317s year 1 2 NA NA 317s values 317s county MULTIPOLYGON (((-81.47276...,...,MULTIPOLYGON (((-78.65572... 317s var BIR , SID , NWBIR 317s year 1974, 1979 317s > 317s BEGIN TEST plot.R 317s 317s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 317s Copyright (C) 2024 The R Foundation for Statistical Computing 317s Platform: arm-unknown-linux-gnueabihf (32-bit) 317s 317s R is free software and comes with ABSOLUTELY NO WARRANTY. 317s You are welcome to redistribute it under certain conditions. 317s Type 'license()' or 'licence()' for distribution details. 317s 317s R is a collaborative project with many contributors. 317s Type 'contributors()' for more information and 317s 'citation()' on how to cite R or R packages in publications. 317s 317s Type 'demo()' for some demos, 'help()' for on-line help, or 317s 'help.start()' for an HTML browser interface to help. 317s Type 'q()' to quit R. 317s 317s > suppressPackageStartupMessages(library(stars)) 318s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 318s + data(air) # this loads several datasets in .GlobalEnv 318s + dim(air) 318s + d = st_dimensions(station = st_as_sfc(stations), time = dates) 318s + aq = st_as_stars(list(PM10 = air), dimensions = d) 318s + image(aperm(log(aq), 2:1), main = "NA pattern (white) in PM10 station time series") 318s + st_geometry(aq) 318s + } 319s Geometry set for 70 features 319s Geometry type: POINT 319s Dimension: XY 319s Bounding box: xmin: 6.28107 ymin: 47.80847 xmax: 14.78617 ymax: 54.92497 319s Geodetic CRS: +proj=longlat +datum=WGS84 +no_defs 319s First 5 geometries: 319s > 319s > csv = system.file("tif/ESACCI-LC-Legend.csv", package = "starsdata") 319s > if (csv != "") { 319s + rgb = read.csv(csv, header = TRUE, sep = ";") 319s + luc = read_stars(system.file("tif/LUC3.tif", package = "starsdata")) 319s POINT (9.585911 53.67057) 319s POINT (9.68503 53.52418) 319s POINT (9.791584 54.07312) 319s POINT (13.64701 52.44775) 319s POINT (13.29635 52.65315) 319s + plot(luc, rgb = rgb, axes = TRUE, key.pos = NULL) 319s + } 319s > 319s > # https://github.com/r-spatial/stars/issues/233 : 319s > nc = read_sf(system.file("shape/nc.shp", package = "sf")) 319s > output = st_as_stars(st_bbox(nc), nx = 1, ny = 1, values = 1) 319s > plot(output) 319s > 319s Warning message: 319s In plot.stars(output) : 319s breaks="quantile" leads to a single class; maybe try breaks="equal" instead? 319s BEGIN TEST predict.R 319s 319s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 319s Copyright (C) 2024 The R Foundation for Statistical Computing 319s Platform: arm-unknown-linux-gnueabihf (32-bit) 319s 319s R is free software and comes with ABSOLUTELY NO WARRANTY. 319s You are welcome to redistribute it under certain conditions. 319s Type 'license()' or 'licence()' for distribution details. 319s 319s R is a collaborative project with many contributors. 319s Type 'contributors()' for more information and 319s 'citation()' on how to cite R or R packages in publications. 319s 319s Type 'demo()' for some demos, 'help()' for on-line help, or 319s 'help.start()' for an HTML browser interface to help. 319s Type 'q()' to quit R. 319s 319s > suppressPackageStartupMessages(library(stars)) 320s > # predict: 320s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 320s > (x = read_stars(tif)) 320s stars object with 3 dimensions and 1 attribute 320s attribute(s): 320s Min. 1st Qu. Median Mean 3rd Qu. Max. 320s L7_ETMs.tif 1 54 69 68.91242 86 255 320s dimension(s): 320s from to offset delta refsys point x/y 320s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 320s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 320s band 1 6 NA NA NA NA 320s > st_crs(x) = st_crs(x) # cleans trailing space 320s > model = lm(x~L7_ETMs.tif, head(as.data.frame(x), 50)) 320s > x = predict(x, model) 322s > 322s > (y = read_stars(tif, proxy = TRUE)) 322s stars_proxy object with 1 attribute in 1 file(s): 322s $L7_ETMs.tif 322s [1] "[...]/L7_ETMs.tif" 322s 322s dimension(s): 322s from to offset delta refsys point x/y 322s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 322s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 322s band 1 6 NA NA NA NA 322s > (yp = predict(y, model)) 322s stars_proxy object with 1 attribute in 1 file(s): 322s $L7_ETMs.tif 322s [1] "[...]/L7_ETMs.tif" 322s 322s dimension(s): 322s from to offset delta refsys point x/y 322s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 322s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 322s band 1 6 NA NA NA NA 322s call_list: 322s [[1]] 322s predict(object = object, model = model) 322s attr(,".Environment") 322s 322s 322s This object has pending lazy operations: dimensions as printed may not reflect this. 322s > all.equal(x, st_as_stars(yp)) 323s [1] TRUE 323s > 323s > yy = st_set_dimensions(y, 3, values = paste0("band", 1:6)) 323s > (y_spl = split(yy, 3)) 323s stars_proxy object with 1 attribute in 1 file(s): 323s $L7_ETMs.tif 323s [1] "[...]/L7_ETMs.tif" 323s 323s dimension(s): 323s from to offset delta refsys point values 323s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 323s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 323s band 1 6 NA NA NA NA band1,...,band6 323s x/y 323s x [x] 323s y [y] 323s band 323s call_list: 323s [[1]] 323s split(x = x, 3) 323s attr(,".Environment") 323s 323s 323s This object has pending lazy operations: dimensions as printed may not reflect this. 323s > as.data.frame(st_as_stars(split(yy, 3)))[1:3,] 323s x y band1 band2 band3 band4 band5 band6 323s 1 288790.5 9120747 69 56 46 79 86 46 323s 2 288819.0 9120747 69 57 49 75 88 49 323s 3 288847.5 9120747 63 52 45 66 75 41 323s > 323s BEGIN TEST proxy.R 323s 323s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 323s Copyright (C) 2024 The R Foundation for Statistical Computing 323s Platform: arm-unknown-linux-gnueabihf (32-bit) 323s 323s R is free software and comes with ABSOLUTELY NO WARRANTY. 323s You are welcome to redistribute it under certain conditions. 323s Type 'license()' or 'licence()' for distribution details. 323s 323s R is a collaborative project with many contributors. 323s Type 'contributors()' for more information and 323s 'citation()' on how to cite R or R packages in publications. 323s 323s Type 'demo()' for some demos, 'help()' for on-line help, or 323s 'help.start()' for an HTML browser interface to help. 323s Type 'q()' to quit R. 323s 324s > Sys.setenv(TZ="UTC") 324s > suppressPackageStartupMessages(library(sf)) 324s > suppressPackageStartupMessages(library(stars)) 324s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 324s > (r = read_stars(tif, proxy = TRUE)) 324s stars_proxy object with 1 attribute in 1 file(s): 324s $L7_ETMs.tif 324s [1] "[...]/L7_ETMs.tif" 324s 324s dimension(s): 324s from to offset delta refsys point x/y 324s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 324s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 324s band 1 6 NA NA NA NA 324s > if (interactive()) { 324s + plot(r) 324s + } 324s > dim(r) 324s x y band 324s 349 352 6 324s > r[,,,2:3] 324s stars_proxy object with 1 attribute in 1 file(s): 324s $L7_ETMs.tif 324s [1] "[...]/L7_ETMs.tif" 324s 324s dimension(s): 324s from to offset delta refsys point x/y 324s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 324s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 324s band 2 3 NA NA NA NA 324s > r+r 324s stars_proxy object with 1 attribute in 1 file(s): 324s $L7_ETMs.tif 324s [1] "[...]/L7_ETMs.tif" 324s 324s dimension(s): 324s from to offset delta refsys point x/y 324s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 324s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 324s band 1 6 NA NA NA NA 324s call_list: 324s [[1]] 324s e1 + e2 324s attr(,".Environment") 324s 324s 324s This object has pending lazy operations: dimensions as printed may not reflect this. 324s > st_as_stars(sin(r), downsample = 2) 324s stars object with 3 dimensions and 1 attribute 324s attribute(s): 324s Min. 1st Qu. Median Mean 3rd Qu. Max. 324s L7_ETMs.tif -0.9999902 -0.676772 0.0353983 0.01655317 0.7210377 0.9999119 324s dimension(s): 324s from to offset delta refsys point x/y 324s x 1 117 288776 85.01 SIRGAS 2000 / UTM zone 25S FALSE [x] 324s y 1 118 9120761 -85.02 SIRGAS 2000 / UTM zone 25S FALSE [y] 324s band 1 6 NA NA NA NA 324s > aperm(r, c(3,2,1)) 324s stars_proxy object with 1 attribute in 1 file(s): 324s $L7_ETMs.tif 324s [1] "[...]/L7_ETMs.tif" 324s 324s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s call_list: 325s [[1]] 325s aperm(a = a, perm = perm) 325s attr(,".Environment") 325s 325s 325s This object has pending lazy operations: dimensions as printed may not reflect this. 325s > if (interactive()) { 325s + plot(r) 325s + } 325s > (xx = c(r,r)) 325s stars_proxy object with 2 attributes in 2 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s > st_redimension(xx) 325s stars_proxy object with 1 attribute in 2 file(s): 325s $L7_ETMs.tif.L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 325s band 1 6 NA NA NA NA 325s new_dim 1 2 NA NA NA NA 325s values x/y 325s x NULL [x] 325s y NULL [y] 325s band NULL 325s new_dim L7_ETMs.tif, L7_ETMs.tif 325s > st_as_stars(r) 325s stars object with 3 dimensions and 1 attribute 325s attribute(s): 325s Min. 1st Qu. Median Mean 3rd Qu. Max. 325s L7_ETMs.tif 1 54 69 68.91242 86 255 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s > (y = st_apply(r, 1:2, max)) 325s stars_proxy object with 1 attribute in 1 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s call_list: 325s [[1]] 325s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 325s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 325s attr(,".Environment") 325s 325s 325s This object has pending lazy operations: dimensions as printed may not reflect this. 325s > (yy = st_as_stars(y, downsample = 1)) 325s stars object with 2 dimensions and 1 attribute 325s attribute(s): 325s Min. 1st Qu. Median Mean 3rd Qu. Max. 325s max 55 85 96 99.38568 113 255 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s > (y = adrop(st_apply(r, c("x", "y"), max))) 325s stars_proxy object with 1 attribute in 1 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s call_list: 325s [[1]] 325s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 325s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 325s attr(,".Environment") 325s 325s 325s [[2]] 325s adrop(x = x, drop = drop) 325s attr(,".Environment") 325s 325s 325s This object has pending lazy operations: dimensions as printed may not reflect this. 325s > (yy = st_as_stars(y, downsample = 1)) 325s stars object with 2 dimensions and 1 attribute 325s attribute(s): 325s Min. 1st Qu. Median Mean 3rd Qu. Max. 325s max 55 85 96 99.38568 113 255 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 176 9120761 -57 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s > plot(yy) 325s > (y = adrop(st_apply(r, c("x", "band"), max))) 325s stars_proxy object with 1 attribute in 1 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s call_list: 325s [[1]] 325s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 325s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 325s attr(,".Environment") 325s 325s 325s [[2]] 325s adrop(x = x, drop = drop) 325s attr(,".Environment") 325s 325s 325s This object has pending lazy operations: dimensions as printed may not reflect this. 325s > (yy = st_as_stars(y, downsample = 1)) 325s stars object with 2 dimensions and 1 attribute 325s attribute(s): 325s Min. 1st Qu. Median Mean 3rd Qu. Max. 325s max 77 111 133 137.8505 157 255 325s dimension(s): 325s Warning message: 325s In FUN(X[[i]], ...) : 325s st_apply on x/y dimensions applied to downsampled image(s) 325s from to offset delta refsys point 325s x 1 175 288776 56.84 SIRGAS 2000 / UTM zone 25S FALSE 325s band 1 6 NA NA NA NA 325s > rm(yy) 325s > 325s > (xx = c(r,r)) 325s stars_proxy object with 2 attributes in 2 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s > names(xx) = c("a", "b") 325s > xx["a"] 325s stars_proxy object with 1 attribute in 1 file(s): 325s $a 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 325s from to offset delta refsys point x/y 325s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 325s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 325s band 1 6 NA NA NA NA 325s > pt = st_point(c(x = 290462.103109179, y = 9114202.32594085)) 325s > buf = st_buffer(st_sfc(pt, crs = st_crs(r)), 1500) 325s > buf = st_sfc(st_polygon(list(st_buffer(pt, 1500)[[1]], st_buffer(pt, 1000)[[1]])), 325s + crs = st_crs(r)) 325s > r = r[buf] # crops 325s > r = r[buf, epsilon = 1e-5] # crops with shrinked bounding box 325s > 325s > # c: 325s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 325s > if (FALSE && f != "") { 325s + files = c("avhrr-only-v2.19810901.nc", 325s + "avhrr-only-v2.19810902.nc", 325s + "avhrr-only-v2.19810903.nc", 325s + "avhrr-only-v2.19810904.nc", 325s + "avhrr-only-v2.19810905.nc", 325s + "avhrr-only-v2.19810906.nc", 325s + "avhrr-only-v2.19810907.nc", 325s + "avhrr-only-v2.19810908.nc", 325s + "avhrr-only-v2.19810909.nc") 325s + l = list() 325s + for (f in files) { 325s + from = system.file(paste0("netcdf/", f), package = "starsdata") 325s + l[[f]] = read_stars(from, sub = c("sst", "anom"), proxy = TRUE) 325s + } 325s + ret = do.call(c, l) 325s + print(ret) 325s + all = system.file(paste0("netcdf/", files), package = "starsdata") 325s + ret = read_stars(all, sub = c("sst", "anom")) 325s + print(ret) 325s + print(st_redimension(ret)) # collapse the two attributes into new dimension 325s + 325s + try(ret <- c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 325s + #print(ret) 325s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 325s + #print(ret) 325s + ret <- st_redimension(l[[1]], along = list(times = as.Date("1981-09-01") + 0:1)) 325s + print(ret) 325s + } 325s > 325s > # demonstrate that environments work: 325s > x = read_stars(tif, proxy = TRUE) 325s > f = function(x) { 325s + g = function(xx) { 325s + ndvi = function(z1, z2, z3, z4, z5, z6) (z2-z1)/(z2+z1) 325s + st_apply(xx, 1:2, ndvi) 325s + } 325s + g(x) 325s + } 325s > (x = f(x)) 325s stars_proxy object with 1 attribute in 1 file(s): 325s $L7_ETMs.tif 325s [1] "[...]/L7_ETMs.tif" 325s 325s dimension(s): 326s from to offset delta refsys point x/y 326s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 326s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 326s band 1 6 NA NA NA NA 326s call_list: 326s [[1]] 326s st_apply(X = X, MARGIN = MARGIN, FUN = FUN, CLUSTER = CLUSTER, 326s PROGRESS = PROGRESS, FUTURE = FUTURE, rename = rename, .fname = .fname) 326s attr(,".Environment") 326s 326s 326s This object has pending lazy operations: dimensions as printed may not reflect this. 326s > st_as_stars(x) 326s stars object with 2 dimensions and 1 attribute 326s attribute(s): 326s Min. 1st Qu. Median Mean 3rd Qu. Max. 326s ndvi -0.2828283 -0.1081081 -0.08287293 -0.08464615 -0.05882353 0.09259259 326s dimension(s): 326s from to offset delta refsys point x/y 326s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 326s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 326s > 326s BEGIN TEST raster.R 326s 326s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 326s Copyright (C) 2024 The R Foundation for Statistical Computing 326s Platform: arm-unknown-linux-gnueabihf (32-bit) 326s 326s R is free software and comes with ABSOLUTELY NO WARRANTY. 326s You are welcome to redistribute it under certain conditions. 326s Type 'license()' or 'licence()' for distribution details. 326s 326s R is a collaborative project with many contributors. 326s Type 'contributors()' for more information and 326s 'citation()' on how to cite R or R packages in publications. 326s 326s Type 'demo()' for some demos, 'help()' for on-line help, or 326s 'help.start()' for an HTML browser interface to help. 326s Type 'q()' to quit R. 326s 326s > options(rgdal_show_exportToProj4_warnings = "none") 326s > suppressPackageStartupMessages(library(stars)) 326s > 326s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require("raster", quietly = TRUE) && 326s + suppressPackageStartupMessages(require("terra", quietly = TRUE))) { 326s + 326s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 326s + (x = read_stars(tif)) 326s + (r = as(x, "Raster")) 326s + (y = st_as_stars(r)) 326s + 326s + # single band: 326s + x = adrop(x[,,,1]) 326s + r = as(x, "Raster") 326s + (y = st_as_stars(r)) 326s + 326s + # proxy: 326s + (x = read_stars(tif, proxy = TRUE)) 326s + (r = as(x, "Raster")) 326s + (y = st_as_stars(r)) 326s + (y2 = st_as_stars(r, proxy = TRUE)) 326s + } 332s stars_proxy object with 1 attribute in 1 file(s): 332s $L7_ETMs.tif 332s [1] "[...]/L7_ETMs.tif" 332s 332s dimension(s): 333s from to offset delta refsys point x/y 333s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 333s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 333s band 1 6 NA NA NA NA 333s > 333s > if (require(terra, quietly = TRUE)) { 333s + ## terra ------------- 333s + stopifnot(require(terra)) 333s + (x = read_stars(tif)) 333s + (r = as(x, "SpatRaster")) 333s + (y = st_as_stars(r)) 333s + 333s + # single band: 333s + x = adrop(x[,,,1]) 333s + r = as(x, "SpatRaster") 333s + (y = st_as_stars(r)) 333s + 333s + # proxy: 333s + (x = read_stars(tif, proxy = TRUE)) 333s + (r = as(x, "SpatRaster")) 333s + (y = st_as_stars(r)) 333s + (y2 = st_as_stars(r, proxy = TRUE)) 333s + 333s + f = system.file("tif/lc.tif", package = "stars") 333s + lc = read_stars(system.file("tif/lc.tif", package = "stars")) 333s + levels(lc[[1]]) 333s + r = rast(lc) 333s + e = attr(lc[[1]], "exclude") 333s + 333s + if (packageVersion("terra") >= "1.5.48") { 333s + 333s + print(all.equal(terra::levels(r)[[1]][,2], terra::levels(rast(f))[[1]][!e,2])) 333s + print(all.equal(terra::coltab(r)[[1]][!e,], terra::coltab(rast(f))[[1]][!e,], check.attributes = FALSE)) 333s + 333s + r<- rast(nrow=10, ncol=10) 333s + set.seed(5) 333s + values(r)<- sample(1:3, size = ncell(r), replace = TRUE) 333s + levels(r) <- data.frame(ID=1:3, category = c("c1", "c2", "c3")) 333s + 333s + r2<- rast(nrow=10, ncol=10) 333s + set.seed(6) 333s + values(r2)<- sample(c(0,2,3), size = ncell(r2), replace = TRUE) 333s + levels(r2) <- data.frame(ID=c(0,2,3), category = c("x1", "x2", "x3")) 333s + 333s + r3<- c(r,r2) 333s + names(r3)<- c("lyr.1", "lyr.2") 333s + 333s + r3_stars<- st_as_stars(r3) 333s + 333s + st_redimension(r3_stars) |> print() 333s + rast(r3_stars) |> levels() |> print() 333s + 333s + m = matrix(1:121, 11, 11) 333s + bb = st_bbox(c(xmin=0, xmax=11, ymin=0, ymax=11)) 333s + s = st_as_stars(bb, values = m) 333s + r = rast(s) 333s + aggregate(r, 2) |> st_as_stars() -> r.s 333s + stopifnot(isTRUE(all.equal(r.s[,1:5,1:5], st_downsample(s, 1, FUN = mean)))) 333s + } 333s + } 333s [1] TRUE 333s [1] TRUE 333s stars object with 3 dimensions and 1 attribute 333s attribute(s): 333s lyr.1.lyr.2 333s c1:34 333s c2:32 333s c3:34 333s x1:28 333s x2:37 333s x3:35 333s dimension(s): 333s from to offset delta refsys values x/y 333s x 1 10 -180 36 WGS 84 (CRS84) NULL [x] 333s y 1 10 90 -18 WGS 84 (CRS84) NULL [y] 333s new_dim 1 2 NA NA NA lyr.1, lyr.2 333s [[1]] 333s IDs categories 333s 1 1 c1 333s 2 2 c2 333s 3 3 c3 333s 333s [[2]] 333s IDs categories 333s 1 0 x1 333s 2 2 x2 333s 3 3 x3 333s 333s > 333s > 333s BEGIN TEST rasterize.R 333s 333s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 333s Copyright (C) 2024 The R Foundation for Statistical Computing 333s Platform: arm-unknown-linux-gnueabihf (32-bit) 333s 333s R is free software and comes with ABSOLUTELY NO WARRANTY. 333s You are welcome to redistribute it under certain conditions. 333s Type 'license()' or 'licence()' for distribution details. 333s 333s R is a collaborative project with many contributors. 333s Type 'contributors()' for more information and 333s 'citation()' on how to cite R or R packages in publications. 333s 333s Type 'demo()' for some demos, 'help()' for on-line help, or 333s 'help.start()' for an HTML browser interface to help. 333s Type 'q()' to quit R. 333s 334s > suppressPackageStartupMessages(library(stars)) 334s > nc = read_sf(system.file("gpkg/nc.gpkg", package="sf")) 334s > (x = st_rasterize(nc)) # default grid: 335s stars object with 2 dimensions and 12 attributes 335s attribute(s): 335s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 335s AREA 0.042 0.108 0.142 1.451932e-01 0.181 0.241 30904 335s PERIMETER 0.999 1.461 1.716 1.786110e+00 2.004 3.640 30904 335s CNTY_ 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 335s CNTY_ID 1825.000 1907.000 1989.000 1.998403e+03 2085.000 2241.000 30904 335s FIPSNO 37001.000 37049.000 37101.000 3.710042e+04 37153.000 37199.000 30904 335s CRESS_ID 1.000 25.000 51.000 5.071206e+01 77.000 100.000 30904 335s BIR74 248.000 1323.000 2648.000 3.791637e+03 4139.000 21588.000 30904 335s SID74 0.000 3.000 5.000 7.891985e+00 10.000 44.000 30904 335s NWBIR74 1.000 297.000 844.000 1.246210e+03 1396.000 8027.000 30904 335s BIR79 319.000 1606.000 3108.000 4.852046e+03 5400.000 30757.000 30904 335s SID79 0.000 3.000 6.000 9.584098e+00 13.000 57.000 30904 335s NWBIR79 3.000 360.000 1058.000 1.604642e+03 1524.000 11631.000 30904 335s dimension(s): 335s from to offset delta refsys point x/y 335s x 1 461 -84.32 0.01925 NAD27 FALSE [x] 335s y 1 141 36.59 -0.01925 NAD27 FALSE [y] 335s > plot(x, axes = TRUE) 335s > # a bit more customized grid: 335s > (x = st_rasterize(nc, st_as_stars(st_bbox(nc), nx = 100, ny = 50, values = NA_real_))) 335s stars object with 2 dimensions and 12 attributes 335s attribute(s): 335s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 335s AREA 0.042 0.108 0.142 0.145536 0.181 0.241 2373 335s PERIMETER 0.999 1.470 1.716 1.789032 2.004 3.640 2373 335s CNTY_ 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 335s CNTY_ID 1825.000 1908.000 1989.000 1999.761325 2088.000 2241.000 2373 335s FIPSNO 37001.000 37049.000 37101.000 37100.327750 37151.000 37199.000 2373 335s CRESS_ID 1.000 25.000 51.000 50.663875 76.000 100.000 2373 335s BIR74 248.000 1323.500 2648.000 3790.530263 4139.000 21588.000 2373 335s SID74 0.000 3.000 5.000 7.905976 10.000 44.000 2373 335s NWBIR74 1.000 289.000 844.000 1246.116483 1396.000 8027.000 2373 335s BIR79 319.000 1606.000 3108.000 4848.231062 5386.000 30757.000 2373 335s SID79 0.000 3.000 6.000 9.574419 13.000 57.000 2373 335s NWBIR79 3.000 360.000 1058.000 1602.740769 1524.000 11631.000 2373 335s dimension(s): 335s from to offset delta refsys point x/y 335s x 1 100 -84.32 0.08867 NAD27 FALSE [x] 335s y 1 50 36.59 -0.05415 NAD27 FALSE [y] 335s > plot(x, axes = TRUE) 335s > (ls = st_sf(a = 1:2, st_sfc(st_linestring(rbind(c(0.1, 0), c(1.1, 1))), st_linestring(rbind(c(0, 0.05), c(1, 0.05)))))) 335s Simple feature collection with 2 features and 1 field 335s Geometry type: LINESTRING 335s Dimension: XY 335s Bounding box: xmin: 0 ymin: 0 xmax: 1.1 ymax: 1 335s CRS: NA 335s a 335s 1 1 335s 2 2 335s c..st_sfc.st_linestring.rbind.c.0.1..0...c.1.1..1.....st_linestring.rbind.c.0..........0.05...c.1..0.05...... 335s 1 LINESTRING (0.1 0, 1.1 1) 335s 2 LINESTRING (0 0.05, 1 0.05) 335s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = NA_real_)) 335s stars object with 2 dimensions and 1 attribute 335s attribute(s): 335s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 335s values NA NA NA NaN NA NA 100 335s dimension(s): 335s from to offset delta x/y 335s x 1 10 0 0.1 [x] 335s y 1 10 1 -0.1 [y] 335s > # the following two plots confirm that (only) the 335s > # upper-left corner is part of the grid cell (when dy is negative), leading 335s > # to a seemingly half-gridcell-shift problem: 335s > ## sf_extSoftVersion()["GDAL"] 335s > plot(st_rasterize(ls, grd), axes = TRUE, reset = FALSE) # ALL_TOUCHED=FALSE; 335s > plot(ls, add = TRUE, col = "red") 335s > plot(st_rasterize(ls, grd, options = "ALL_TOUCHED=TRUE"), axes = TRUE, reset = FALSE) 335s > plot(ls, add = TRUE, col = "red") 335s > # add lines to existing 0 values, summing values in case of multiple lines: 335s > (grd = st_as_stars(st_bbox(ls), nx = 10, ny = 10, xlim = c(0, 1.0), ylim = c(0, 1), values = 0)) 335s stars object with 2 dimensions and 1 attribute 335s attribute(s): 335s Min. 1st Qu. Median Mean 3rd Qu. Max. 335s values 0 0 0 0 0 0 335s dimension(s): 335s from to offset delta x/y 335s x 1 10 0 0.1 [x] 335s y 1 10 1 -0.1 [y] 335s > r = st_rasterize(ls, grd, options = c("MERGE_ALG=ADD", "ALL_TOUCHED=TRUE")) 335s > plot(r, axes = TRUE, reset = FALSE) 335s > plot(ls, add = TRUE, col = "red") 335s > 335s BEGIN TEST rectilinear.R 336s 336s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 336s Copyright (C) 2024 The R Foundation for Statistical Computing 336s Platform: arm-unknown-linux-gnueabihf (32-bit) 336s 336s R is free software and comes with ABSOLUTELY NO WARRANTY. 336s You are welcome to redistribute it under certain conditions. 336s Type 'license()' or 'licence()' for distribution details. 336s 336s R is a collaborative project with many contributors. 336s Type 'contributors()' for more information and 336s 'citation()' on how to cite R or R packages in publications. 336s 336s Type 'demo()' for some demos, 'help()' for on-line help, or 336s 'help.start()' for an HTML browser interface to help. 336s Type 'q()' to quit R. 336s 336s > suppressPackageStartupMessages(library(stars)) 336s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 336s > x = read_stars(tif) 336s > (xx = x[,c(1:347,349),c(1:350,352),]) # rectilinear: one-but-last row & col missing 336s stars object with 3 dimensions and 1 attribute 336s attribute(s): 336s Min. 1st Qu. Median Mean 3rd Qu. Max. 336s L7_ETMs.tif 1 54 69 68.9915 86 255 336s dimension(s): 336s from to refsys point 336s x 1 348 SIRGAS 2000 / UTM zone 25S FALSE 336s y 1 351 SIRGAS 2000 / UTM zone 25S FALSE 336s band 1 6 NA NA 336s values x/y 336s x [288790.5,288819),...,[298708.5,298737) [x] 336s y [9120747,9120718),...,[9110743,9110715) [y] 336s band NULL 336s > image(xx) # chooses useRaster itself 337s > # see also tidy.R for a ggplot example, leaving out the row. 337s > 337s > m = matrix(1:16, 4, 4) 337s > x = 1:4 337s > y = 2:5 337s > (st = st_as_stars(list(m = m), dimensions = st_dimensions(x = x, y = y))) 337s stars object with 2 dimensions and 1 attribute 337s attribute(s): 337s Min. 1st Qu. Median Mean 3rd Qu. Max. 337s m 1 4.75 8.5 8.5 12.25 16 337s dimension(s): 337s from to offset delta point x/y 337s x 1 4 1 1 FALSE [x] 337s y 1 4 2 1 FALSE [y] 337s > st = st_set_dimensions(st, 1, values = c(1,2,3,4,6)) 337s > st = st_set_dimensions(st, 2, values = c(2,3,4,5,8)) 337s > try(st_set_dimensions(st, 2, values = c(2,3,4,5,8,20))) # one too many 337s Error in st_set_dimensions(st, 2, values = c(2, 3, 4, 5, 8, 20)) : 337s length of values ( 6 ) does not match length of dimension 2 ( 4 ) 337s > 337s > # $<-.stars: 337s > st$foo = st$m * 2 337s > st 337s stars object with 2 dimensions and 2 attributes 337s attribute(s): 337s Min. 1st Qu. Median Mean 3rd Qu. Max. 337s m 1 4.75 8.5 8.5 12.25 16 337s foo 2 9.50 17.0 17.0 24.50 32 337s dimension(s): 337s from to point values x/y 337s x 1 4 FALSE [1,2),...,[4,6) [x] 337s y 1 4 FALSE [2,3),...,[5,8) [y] 337s > 337s > # st_as_sf: 337s > 337s > if (utils::packageVersion("sf") > "0.7.2") { 337s + plot(st_as_sf(st, as_points = FALSE), axes = TRUE) 337s + } 337s > 337s > image(st, text_values = TRUE, axes = TRUE) 337s > 337s BEGIN TEST redimension.R 337s 337s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 337s Copyright (C) 2024 The R Foundation for Statistical Computing 337s Platform: arm-unknown-linux-gnueabihf (32-bit) 337s 337s R is free software and comes with ABSOLUTELY NO WARRANTY. 337s You are welcome to redistribute it under certain conditions. 337s Type 'license()' or 'licence()' for distribution details. 337s 337s R is a collaborative project with many contributors. 337s Type 'contributors()' for more information and 337s 'citation()' on how to cite R or R packages in publications. 337s 337s Type 'demo()' for some demos, 'help()' for on-line help, or 337s 'help.start()' for an HTML browser interface to help. 337s Type 'q()' to quit R. 337s 337s > suppressPackageStartupMessages(library(stars)) 338s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 338s > r = read_stars(list(a = c(tif,tif), b = c(tif, tif)), proxy = TRUE) 338s > (xx = st_redimension(r, along = list(foo = 1:4))) 338s stars_proxy object with 1 attribute in 4 file(s): 338s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" 338s 338s dimension(s): 338s from to offset delta refsys point x/y 338s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 338s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 338s band 1 6 NA NA NA NA 338s foo 1 4 1 1 NA NA 338s > (rr = c(xx, xx)) 338s stars_proxy object with 2 attributes in 8 file(s): 338s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" 338s 338s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" 338s 338s dimension(s): 338s from to offset delta refsys point x/y 338s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 338s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 338s band 1 6 NA NA NA NA 338s foo 1 4 1 1 NA NA 338s > # st_as_stars(rr) 338s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 338s stars_proxy object with 1 attribute in 8 file(s): 338s $a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif.a.L7_ETMs.tif.a.L7_ETMs.tif.b.L7_ETMs.tif.b.L7_ETMs.tif 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s 338s dimension(s): 338s from to offset delta refsys point x/y 338s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 338s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 338s band 1 6 NA NA NA NA 338s foo 1 4 1 1 NA NA 338s bar 1 2 2001-01-01 365 days Date NA 338s > (rr = c(a = xx, b = xx)) 338s stars_proxy object with 2 attributes in 8 file(s): 338s $a 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" 338s 338s $b 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" 338s 338s dimension(s): 338s from to offset delta refsys point x/y 338s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 338s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 338s band 1 6 NA NA NA NA 338s foo 1 4 1 1 NA NA 338s > # st_as_stars(rr) 338s > (rrr = st_redimension(rr, along = list(bar = as.Date(c("2001-01-01", "2002-01-01"))))) 338s stars_proxy object with 1 attribute in 8 file(s): 338s $a.b 338s [1] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [4] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s [7] "[...]/L7_ETMs.tif" "[...]/L7_ETMs.tif" 338s 338s dimension(s): 338s from to offset delta refsys point x/y 338s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 338s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 338s band 1 6 NA NA NA NA 338s foo 1 4 1 1 NA NA 338s bar 1 2 2001-01-01 365 days Date NA 338s > 338s BEGIN TEST sf.R 338s 338s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 338s Copyright (C) 2024 The R Foundation for Statistical Computing 338s Platform: arm-unknown-linux-gnueabihf (32-bit) 338s 338s R is free software and comes with ABSOLUTELY NO WARRANTY. 338s You are welcome to redistribute it under certain conditions. 338s Type 'license()' or 'licence()' for distribution details. 338s 338s R is a collaborative project with many contributors. 338s Type 'contributors()' for more information and 338s 'citation()' on how to cite R or R packages in publications. 338s 338s Type 'demo()' for some demos, 'help()' for on-line help, or 338s 'help.start()' for an HTML browser interface to help. 338s Type 'q()' to quit R. 338s 338s > suppressPackageStartupMessages(library(stars)) 339s > library(sf) 339s > #jp2 = system.file("jp2/B01.jp2", package = "stars") 339s > #(x = read_stars(jp2, options = c("OVERVIEW_LEVEL=3"))) 339s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 339s > #(x = read_stars(tif, options = c("OVERVIEW_LEVEL=3"))) # FIXME: breaks on windows 339s > (x = read_stars(tif)[,1:20,1:20]) 339s stars object with 3 dimensions and 1 attribute 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s L7_ETMs.tif 17 44 58 58.19667 70 130 339s dimension(s): 339s from to offset delta refsys point x/y 339s x 1 20 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 339s y 1 20 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 339s band 1 6 NA NA NA NA 339s > # names(x) = "L7_ETM" 339s > 339s > # library(abind) 339s > # x = adrop(x) 339s > image(x) 339s > (sfc = st_as_sfc(x, as_points = FALSE)) 339s Geometry set for 400 features 339s Geometry type: POLYGON 339s Dimension: XY 339s Bounding box: xmin: 288776.3 ymin: 9120191 xmax: 289346.3 ymax: 9120761 339s Projected CRS: SIRGAS 2000 / UTM zone 25S 339s First 5 geometries: 339s POLYGON ((288776.3 9120761, 288804.8 9120761, 2... 339s POLYGON ((288804.8 9120761, 288833.3 9120761, 2... 339s POLYGON ((288833.3 9120761, 288861.8 9120761, 2... 339s POLYGON ((288861.8 9120761, 288890.3 9120761, 2... 339s POLYGON ((288890.3 9120761, 288918.8 9120761, 2... 339s > plot(sfc, add =TRUE) 339s > (sfc = st_as_sfc(x, as_points = TRUE)) 339s Geometry set for 400 features 339s Geometry type: POINT 339s Dimension: XY 339s Bounding box: xmin: 288790.5 ymin: 9120205 xmax: 289332 ymax: 9120747 339s POINT (288790.5 9120747) 339s POINT (288819 9120747) 339s POINT (288847.5 9120747) 339s POINT (288876 9120747) 339s POINT (288904.5 9120747) 339s Projected CRS: SIRGAS 2000 / UTM zone 25S 339s First 5 geometries: 339s > plot(sfc, add = TRUE) 339s > 339s > sf = st_as_sf(x, as_points = FALSE) 339s > plot(sf, border = NA) 339s > sf = st_as_sf(x[,,,1], as_points = FALSE, merge = TRUE) 339s > plot(sf, border = NA) 339s > 339s > sfc1 <- st_as_sfc(x, as_points = TRUE, use_cpp = TRUE, na.rm = FALSE) 339s > sfc2 <- st_as_sfc(x, as_points = TRUE, use_cpp = FALSE) 339s > identical(sfc1, sfc2) 339s [1] TRUE 339s > 339s > sfc1 <- st_as_sfc(x, as_points = FALSE, use_cpp = TRUE, na.rm = FALSE) 339s > sfc2 <- st_as_sfc(x, as_points = FALSE, use_cpp = FALSE) 339s > identical(sfc1, sfc2) 339s [1] TRUE 339s > 339s > # sf -> stars -> sf 339s > x = st_sfc(st_point(0:1), st_point(1:2), st_point(2:3)) 339s > m = matrix(1:9,3) 339s > colnames(m) = c("a", "b", "c") 339s > foo = st_sf(m, geom = x) 339s > x = st_as_stars(foo) 339s > c(x) 339s stars object with 1 dimensions and 3 attributes 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s a 1 1.5 2 2 2.5 3 339s b 4 4.5 5 5 5.5 6 339s c 7 7.5 8 8 8.5 9 339s dimension(s): 339s from to point values 339s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 339s > st_redimension(x) 339s stars object with 2 dimensions and 1 attribute 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s a.b.c 1 3 5 5 7 9 339s dimension(s): 339s from to point values 339s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 339s new_dim 1 3 NA a, b, c 339s > c(x, x) 339s stars object with 1 dimensions and 6 attributes 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s a 1 1.5 2 2 2.5 3 339s b 4 4.5 5 5 5.5 6 339s c 7 7.5 8 8 8.5 9 339s a.1 1 1.5 2 2 2.5 3 339s b.1 4 4.5 5 5 5.5 6 339s c.1 7 7.5 8 8 8.5 9 339s dimension(s): 339s from to point values 339s geom 1 3 TRUE POINT (0 1),...,POINT (2 3) 339s > (y = st_redimension(x, along = list(time = as.Date("2017-11-27") + 0:2))) 339s stars object with 2 dimensions and 1 attribute 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s a.b.c 1 3 5 5 7 9 339s dimension(s): 339s from to offset delta refsys point values 339s geom 1 3 NA NA NA TRUE POINT (0 1),...,POINT (2 3) 339s time 1 3 2017-11-27 1 days Date NA NULL 339s > st_as_sf(y) 339s Simple feature collection with 3 features and 3 fields 339s Geometry type: POINT 339s Dimension: XY 339s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 339s CRS: NA 339s 2017-11-27 2017-11-28 2017-11-29 geom 339s 1 1 4 7 POINT (0 1) 339s 2 2 5 8 POINT (1 2) 339s 3 3 6 9 POINT (2 3) 339s > st_as_sf(st_as_stars(foo)) 339s Simple feature collection with 3 features and 3 fields 339s Geometry type: POINT 339s Dimension: XY 339s Bounding box: xmin: 0 ymin: 1 xmax: 2 ymax: 3 339s CRS: NA 339s a b c geom 339s 1 1 4 7 POINT (0 1) 339s 2 2 5 8 POINT (1 2) 339s 3 3 6 9 POINT (2 3) 339s > 339s > c(x,x,along=1) # NEEDS FIXING! 339s stars object with 1 dimensions and 3 attributes 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s a 1 1.25 2 2 2.75 3 339s b 4 4.25 5 5 5.75 6 339s c 7 7.25 8 8 8.75 9 339s dimension(s): 339s from to point values 339s geom 1 6 TRUE POINT (0 1),...,POINT (2 3) 339s > # st_as_stars.sfc 339s > st_as_stars(st_geometry(st_as_sf(y)), nx = 10, ny = 10, as_points = FALSE) 339s stars object with 2 dimensions and 1 attribute 339s attribute(s): 339s Min. 1st Qu. Median Mean 3rd Qu. Max. 339s values 0 0 0 0.06 0 1 339s dimension(s): 339s from to offset delta x/y 339s x 1 10 0 0.2 [x] 339s y 1 10 3 -0.2 [y] 339s > 339s BEGIN TEST sp.R 339s 339s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 339s Copyright (C) 2024 The R Foundation for Statistical Computing 339s Platform: arm-unknown-linux-gnueabihf (32-bit) 339s 339s R is free software and comes with ABSOLUTELY NO WARRANTY. 339s You are welcome to redistribute it under certain conditions. 339s Type 'license()' or 'licence()' for distribution details. 339s 339s R is a collaborative project with many contributors. 339s Type 'contributors()' for more information and 339s 'citation()' on how to cite R or R packages in publications. 339s 339s Type 'demo()' for some demos, 'help()' for on-line help, or 339s 'help.start()' for an HTML browser interface to help. 339s Type 'q()' to quit R. 339s 340s > options(rgdal_show_exportToProj4_warnings = "none") 340s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE))) { 340s + demo(meuse) 340s + # remove +init=xxx 340s + meuse@proj4string = CRS( 340s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 340s + ) 340s + meuse.grid@proj4string = CRS( 340s + "+proj=sterea +lat_0=52.1561605555556 +lon_0=5.38763888888889 +k=0.9999079 +x_0=155000 +y_0=463000 +ellps=bessel +units=m +no_defs" 340s + ) 340s + 340s + suppressPackageStartupMessages(library(stars)) 340s + (m = st_as_stars(meuse)) 340s + (gr = st_as_stars(meuse.grid)) 340s + 340s + m2 = as(m, "Spatial") 340s + summary(m2) 340s + gr2 = as(gr, "Spatial") 340s + summary(gr2) 340s + 340s + all.equal(meuse, m2, check.attributes = FALSE) 340s + fullgrid(meuse.grid) = TRUE 340s + all.equal(meuse.grid, gr2, check.attributes = FALSE) 340s + 340s + #all.equal(meuse, m2) 340s + #all.equal(meuse.grid, gr2) 340s + } 340s 340s 340s demo(meuse) 340s ---- ~~~~~ 340s 340s > require(sp) 340s 340s > crs = CRS("EPSG:28992") 340s 340s > data("meuse") 340s 340s > coordinates(meuse) <- ~x+y 340s 340s > proj4string(meuse) <- crs 340s 340s > data("meuse.grid") 340s 340s > coordinates(meuse.grid) <- ~x+y 340s 340s > gridded(meuse.grid) <- TRUE 340s 340s > proj4string(meuse.grid) <- crs 340s 340s > data("meuse.riv") 340s 340s > meuse.riv <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)),"meuse.riv"))) 340s 340s > proj4string(meuse.riv) <- crs 340s 340s > data("meuse.area") 340s 340s > meuse.area = SpatialPolygons(list(Polygons(list(Polygon(meuse.area)), "area"))) 340s 340s > proj4string(meuse.area) <- crs 341s [1] TRUE 341s > 341s BEGIN TEST spacetime.R 341s 341s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 341s Copyright (C) 2024 The R Foundation for Statistical Computing 341s Platform: arm-unknown-linux-gnueabihf (32-bit) 341s 341s R is free software and comes with ABSOLUTELY NO WARRANTY. 341s You are welcome to redistribute it under certain conditions. 341s Type 'license()' or 'licence()' for distribution details. 341s 341s R is a collaborative project with many contributors. 341s Type 'contributors()' for more information and 341s 'citation()' on how to cite R or R packages in publications. 341s 341s Type 'demo()' for some demos, 'help()' for on-line help, or 341s 'help.start()' for an HTML browser interface to help. 341s Type 'q()' to quit R. 341s 341s > suppressPackageStartupMessages(library(stars)) 341s > if (suppressPackageStartupMessages(require(sp, quietly = TRUE)) && require(spacetime, quietly = TRUE)) { 341s + set.seed(1331) 341s + Sys.setenv(TZ="UTC") 341s + example(STFDF) 341s + 341s + x = st_as_stars(stfdf) 341s + xx = as(x, "STFDF") 341s + 341s + # as.xts.stars: 341s + library(xts) 341s + xts = as.xts(x) 341s + st_as_stars(xts) 341s + st_as_stars(xts, dimensions = st_dimensions(x)) 341s + 341s + library(sp) 341s + pts = SpatialPoints(rbind(c(0,0), c(0,1), c(1,0), c(1,1))) 341s + gridded(pts) = TRUE 341s + 341s + tm = xts(1:10, as.Date("2010-01-01")+0:9) 341s + stfdf = STFDF(pts, tm, data.frame(foo = seq_len(length(pts) * length(tm)))) 341s + x = st_as_stars(stfdf) 341s + xx = as(x, "STFDF") 341s + 341s + x = st_as_stars(as(stfdf, "STSDF")) 341s + } 342s 342s STFDF> sp = cbind(x = c(0,0,1), y = c(0,1,1)) 342s 342s STFDF> row.names(sp) = paste("point", 1:nrow(sp), sep="") 342s 342s STFDF> library(sp) 342s 342s STFDF> sp = SpatialPoints(sp) 342s 342s STFDF> time = as.POSIXct("2010-08-05")+3600*(10:13) 342s 342s STFDF> m = c(10,20,30) # means for each of the 3 point locations 342s 342s STFDF> mydata = rnorm(length(sp)*length(time),mean=rep(m, 4)) 342s 342s STFDF> IDs = paste("ID",1:length(mydata)) 342s 342s STFDF> mydata = data.frame(values = signif(mydata,3), ID=IDs) 342s 342s STFDF> stfdf = STFDF(sp, time, mydata) 342s 342s STFDF> stfdf 342s An object of class "STFDF" 342s Slot "data": 342s values ID 342s 1 9.38 ID 1 342s 2 21.10 ID 2 342s 3 29.80 ID 3 342s 4 11.50 ID 4 342s 5 19.80 ID 5 342s 6 31.20 ID 6 342s 7 10.40 ID 7 342s 8 20.50 ID 8 342s 9 29.80 ID 9 342s 10 10.30 ID 10 342s 11 21.40 ID 11 342s 12 29.40 ID 12 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s point3 1 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 2010-08-05 12:00:00 3 342s 2010-08-05 13:00:00 4 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 342s 342s 342s STFDF> stfdf[1:2,] 342s An object of class "STFDF" 342s Slot "data": 342s values ID 342s 1 9.38 ID 1 342s 2 21.10 ID 2 342s 3 11.50 ID 4 342s 4 19.80 ID 5 342s 5 10.40 ID 7 342s 6 20.50 ID 8 342s 7 10.30 ID 10 342s 8 21.40 ID 11 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 2010-08-05 12:00:00 3 342s 2010-08-05 13:00:00 4 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 342s 342s 342s STFDF> stfdf[,1:2] 342s An object of class "STFDF" 342s Slot "data": 342s values ID 342s 1 9.38 ID 1 342s 2 21.10 ID 2 342s 3 29.80 ID 3 342s 4 11.50 ID 4 342s 5 19.80 ID 5 342s 6 31.20 ID 6 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s point3 1 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s 342s 342s STFDF> stfdf[,,2] 342s An object of class "STFDF" 342s Slot "data": 342s ID 342s 1 ID 1 342s 2 ID 2 342s 3 ID 3 342s 4 ID 4 342s 5 ID 5 342s 6 ID 6 342s 7 ID 7 342s 8 ID 8 342s 9 ID 9 342s 10 ID 10 342s 11 ID 11 342s 12 ID 12 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s point3 1 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 2010-08-05 12:00:00 3 342s 2010-08-05 13:00:00 4 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 342s 342s 342s STFDF> stfdf[,,"values"] 342s An object of class "STFDF" 342s Slot "data": 342s values 342s 1 9.38 342s 2 21.10 342s 3 29.80 342s 4 11.50 342s 5 19.80 342s 6 31.20 342s 7 10.40 342s 8 20.50 342s 9 29.80 342s 10 10.30 342s 11 21.40 342s 12 29.40 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s point3 1 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 2010-08-05 12:00:00 3 342s 2010-08-05 13:00:00 4 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 342s 342s 342s STFDF> stfdf[1,] 342s values ID timeIndex 342s 2010-08-05 10:00:00 9.38 ID 1 1 342s 2010-08-05 11:00:00 11.50 ID 4 2 342s 2010-08-05 12:00:00 10.40 ID 7 3 342s 2010-08-05 13:00:00 10.30 ID 10 4 342s 342s STFDF> stfdf[,2] 342s coordinates values ID 342s 1 (0, 0) 11.5 ID 4 342s 2 (0, 1) 19.8 ID 5 342s 3 (1, 1) 31.2 ID 6 342s 342s STFDF> as(stfdf[,,1], "xts") 342s point1 point2 point3 342s 2010-08-05 10:00:00 9.38 21.1 29.8 342s 2010-08-05 11:00:00 11.50 19.8 31.2 342s 2010-08-05 12:00:00 10.40 20.5 29.8 342s 2010-08-05 13:00:00 10.30 21.4 29.4 342s 342s STFDF> as(stfdf[,,2], "xts") 342s point1 point2 point3 342s 2010-08-05 10:00:00 ID 1 ID 2 ID 3 342s 2010-08-05 11:00:00 ID 4 ID 5 ID 6 342s 2010-08-05 12:00:00 ID 7 ID 8 ID 9 342s 2010-08-05 13:00:00 ID 10 ID 11 ID 12 342s 342s STFDF> # examples for [[, [[<-, $ and $<- 342s STFDF> stfdf[[1]] 342s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 342s 342s STFDF> stfdf[["values"]] 342s [1] 9.38 21.10 29.80 11.50 19.80 31.20 10.40 20.50 29.80 10.30 21.40 29.40 342s 342s STFDF> stfdf[["newVal"]] <- rnorm(12) 342s 342s STFDF> stfdf$ID 342s [1] "ID 1" "ID 2" "ID 3" "ID 4" "ID 5" "ID 6" "ID 7" "ID 8" "ID 9" 342s [10] "ID 10" "ID 11" "ID 12" 342s 342s STFDF> stfdf$ID = paste("OldIDs", 1:12, sep="") 342s 342s STFDF> stfdf$NewID = paste("NewIDs", 12:1, sep="") 342s 342s STFDF> stfdf 342s An object of class "STFDF" 342s Slot "data": 342s values ID newVal NewID 342s 1 9.38 OldIDs1 -0.3125824 NewIDs12 342s 2 21.10 OldIDs2 -1.0536246 NewIDs11 342s 3 29.80 OldIDs3 -0.7188880 NewIDs10 342s 4 11.50 OldIDs4 -1.0525404 NewIDs9 342s 5 19.80 OldIDs5 -0.8441413 NewIDs8 342s 6 31.20 OldIDs6 1.1420848 NewIDs7 342s 7 10.40 OldIDs7 1.9479070 NewIDs6 342s 8 20.50 OldIDs8 -0.4512836 NewIDs5 342s 9 29.80 OldIDs9 0.6695716 NewIDs4 342s 10 10.30 OldIDs10 0.1269003 NewIDs3 342s 11 21.40 OldIDs11 -0.7273297 NewIDs2 342s 12 29.40 OldIDs12 -0.8151803 NewIDs1 342s 342s Slot "sp": 342s SpatialPoints: 342s x y 342s point1 0 0 342s point2 0 1 342s point3 1 1 342s Coordinate Reference System (CRS) arguments: NA 342s 342s Slot "time": 342s timeIndex 342s 2010-08-05 10:00:00 1 342s 2010-08-05 11:00:00 2 342s 2010-08-05 12:00:00 3 342s 2010-08-05 13:00:00 4 342s 342s Slot "endTime": 342s [1] "2010-08-05 11:00:00 UTC" "2010-08-05 12:00:00 UTC" 342s [3] "2010-08-05 13:00:00 UTC" "2010-08-05 14:00:00 UTC" 342s 342s 342s STFDF> x = stfdf[stfdf[1:2,],] 342s 342s STFDF> all.equal(x, stfdf[1:2,]) 342s [1] TRUE 342s 342s STFDF> all.equal(stfdf, stfdf[stfdf,]) # converts character to factor... 342s [1] TRUE 342s Loading required package: zoo 342s 342s Attaching package: 'zoo' 342s 342s The following objects are masked from 'package:base': 342s 342s as.Date, as.Date.numeric 342s 342s only the first attribute will used; maybe use merge() first? 343s > 343s BEGIN TEST spatstat.R 343s 343s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 343s Copyright (C) 2024 The R Foundation for Statistical Computing 343s Platform: arm-unknown-linux-gnueabihf (32-bit) 343s 343s R is free software and comes with ABSOLUTELY NO WARRANTY. 343s You are welcome to redistribute it under certain conditions. 343s Type 'license()' or 'licence()' for distribution details. 343s 343s R is a collaborative project with many contributors. 343s Type 'contributors()' for more information and 343s 'citation()' on how to cite R or R packages in publications. 343s 343s Type 'demo()' for some demos, 'help()' for on-line help, or 343s 'help.start()' for an HTML browser interface to help. 343s Type 'q()' to quit R. 343s 343s > suppressPackageStartupMessages(library(sf)) 343s > 343s > library(stars) 343s Loading required package: abind 343s > if (suppressPackageStartupMessages(require(spatstat.geom, quietly = TRUE))) { 343s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 343s + s = adrop(read_stars(tif)[,,,1]) > 70 343s + plot(s) 343s + m = as.owin(s) 343s + plot(m) 343s + print(table(m$m)) 343s + } 345s 345s FALSE TRUE 345s 39494 83354 345s > 345s BEGIN TEST stars.R 345s 345s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 345s Copyright (C) 2024 The R Foundation for Statistical Computing 345s Platform: arm-unknown-linux-gnueabihf (32-bit) 345s 345s R is free software and comes with ABSOLUTELY NO WARRANTY. 345s You are welcome to redistribute it under certain conditions. 345s Type 'license()' or 'licence()' for distribution details. 345s 345s R is a collaborative project with many contributors. 345s Type 'contributors()' for more information and 345s 'citation()' on how to cite R or R packages in publications. 345s 345s Type 'demo()' for some demos, 'help()' for on-line help, or 345s 'help.start()' for an HTML browser interface to help. 345s Type 'q()' to quit R. 345s 345s > Sys.setenv(TZ="UTC") 345s > suppressPackageStartupMessages(library(stars)) 346s > set.seed(13521) # runif 346s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 346s > (x_ = read_stars(c(tif,tif))) # FIXME: not what you'd expect 346s stars object with 3 dimensions and 2 attributes 346s attribute(s): 346s Min. 1st Qu. Median Mean 3rd Qu. Max. 346s L7_ETMs.tif 1 54 69 68.91242 86 255 346s L7_ETMs.tif.1 1 54 69 68.91242 86 255 346s dimension(s): 346s from to offset delta refsys point x/y 346s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 346s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 346s band 1 6 NA NA NA NA 346s > (x = read_stars(tif)) 346s stars object with 3 dimensions and 1 attribute 346s attribute(s): 346s Min. 1st Qu. Median Mean 3rd Qu. Max. 346s L7_ETMs.tif 1 54 69 68.91242 86 255 346s dimension(s): 346s from to offset delta refsys point x/y 346s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 346s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 346s band 1 6 NA NA NA NA 346s > # image(x) 346s > gdal_crs(tif) 346s Coordinate Reference System: 346s User input: PROJCS["SIRGAS 2000 / UTM zone 25S",GEOGCS["SIRGAS 2000",DATUM["Sistema_de_Referencia_Geocentrico_para_las_AmericaS_2000",SPHEROID["GRS 1980",6378137,298.257222101,AUTHORITY["EPSG","7019"]],AUTHORITY["EPSG","6674"]],PRIMEM["Greenwich",0,AUTHORITY["EPSG","8901"]],UNIT["degree",0.0174532925199433,AUTHORITY["EPSG","9122"]],AUTHORITY["EPSG","4674"]],PROJECTION["Transverse_Mercator"],PARAMETER["latitude_of_origin",0],PARAMETER["central_meridian",-33],PARAMETER["scale_factor",0.9996],PARAMETER["false_easting",500000],PARAMETER["false_northing",10000000],UNIT["metre",1,AUTHORITY["EPSG","9001"]],AXIS["Easting",EAST],AXIS["Northing",NORTH],AUTHORITY["EPSG","31985"]] 346s wkt: 346s PROJCRS["SIRGAS 2000 / UTM zone 25S", 346s BASEGEOGCRS["SIRGAS 2000", 346s DATUM["Sistema de Referencia Geocentrico para las AmericaS 2000", 346s ELLIPSOID["GRS 1980",6378137,298.257222101, 346s LENGTHUNIT["metre",1]]], 346s PRIMEM["Greenwich",0, 346s ANGLEUNIT["degree",0.0174532925199433]], 346s ID["EPSG",4674]], 346s CONVERSION["UTM zone 25S", 346s METHOD["Transverse Mercator", 346s ID["EPSG",9807]], 346s PARAMETER["Latitude of natural origin",0, 346s ANGLEUNIT["degree",0.0174532925199433], 346s ID["EPSG",8801]], 346s PARAMETER["Longitude of natural origin",-33, 346s ANGLEUNIT["degree",0.0174532925199433], 346s ID["EPSG",8802]], 346s PARAMETER["Scale factor at natural origin",0.9996, 346s SCALEUNIT["unity",1], 346s ID["EPSG",8805]], 346s PARAMETER["False easting",500000, 346s LENGTHUNIT["metre",1], 346s ID["EPSG",8806]], 346s PARAMETER["False northing",10000000, 346s LENGTHUNIT["metre",1], 346s ID["EPSG",8807]]], 346s CS[Cartesian,2], 346s AXIS["easting",east, 346s ORDER[1], 346s LENGTHUNIT["metre",1]], 346s AXIS["northing",north, 346s ORDER[2], 346s LENGTHUNIT["metre",1]], 346s ID["EPSG",31985]] 346s > plot(x) 347s > plot(x, join_zlim = FALSE) 347s > x %>% st_set_dimensions(names = c('a', 'b', 'c')) 347s stars object with 3 dimensions and 1 attribute 347s attribute(s): 347s Min. 1st Qu. Median Mean 3rd Qu. Max. 347s L7_ETMs.tif 1 54 69 68.91242 86 255 347s dimension(s): 347s from to offset delta refsys point x/y 347s a 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 347s b 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 347s c 1 6 NA NA NA NA 347s > st_get_dimension_values(x, 3) 347s [1] 1 2 3 4 5 6 347s > 347s > (x1 = st_set_dimensions(x, "band", values = c(1,2,3,4,5,7), names = "band_number", point = TRUE)) 347s stars object with 3 dimensions and 1 attribute 347s attribute(s): 347s Min. 1st Qu. Median Mean 3rd Qu. Max. 347s L7_ETMs.tif 1 54 69 68.91242 86 255 347s dimension(s): 347s from to offset delta refsys point values x/y 347s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 347s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 347s band_number 1 6 NA NA NA TRUE 1,...,7 347s > rbind(c(0.45,0.515), c(0.525,0.605), c(0.63,0.69), c(0.775,0.90), c(1.55,1.75), c(2.08,2.35)) %>% 347s + units::set_units(um) -> bw # units::set_units(µm) -> bw 347s > # set bandwidth midpoint: 347s > (x2 = st_set_dimensions(x, "band", values = 0.5 * (bw[,1]+bw[,2]), 347s + names = "bandwidth_midpoint", point = TRUE)) 347s stars object with 3 dimensions and 1 attribute 347s attribute(s): 347s Min. 1st Qu. Median Mean 3rd Qu. Max. 347s L7_ETMs.tif 1 54 69 68.91242 86 255 347s dimension(s): 348s from to offset delta refsys point 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 348s bandwidth_midpoint 1 6 NA NA udunits TRUE 348s values x/y 348s x NULL [x] 348s y NULL [y] 348s bandwidth_midpoint 0.4825 [um],...,2.215 [um] 348s > # set bandwidth intervals: 348s > (x3 = st_set_dimensions(x, "band", values = make_intervals(bw), names = "bandwidth")) 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 1 54 69 68.91242 86 255 348s dimension(s): 348s from to offset delta refsys point 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE 348s bandwidth 1 6 NA NA udunits NA 348s values x/y 348s x NULL [x] 348s y NULL [y] 348s bandwidth [0.45,0.515) [um],...,[2.08,2.35) [um] 348s > 348s > x + x 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 2 108 138 137.8248 172 510 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s band 1 6 NA NA NA NA 348s > x * x 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 1 2916 4761 5512.41 7396 65025 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s band 1 6 NA NA NA NA 348s > x[,,,1:3] 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 21 58 70 70.36041 83 255 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s band 1 3 NA NA NA NA 348s > x[,1:100,100:200,] 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 13 54 65 67.21531 77 252 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 100 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 100 200 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s band 1 6 NA NA NA NA 348s > sqrt(x) 348s stars object with 3 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s L7_ETMs.tif 1 7.348469 8.306624 8.094006 9.273618 15.96872 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s band 1 6 NA NA NA NA 348s > st_apply(x, 3, min) 348s stars object with 1 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s min 1 3 15 18.5 29.25 47 348s dimension(s): 348s from to 348s band 1 6 348s > st_apply(x, 1:2, max) 348s stars object with 2 dimensions and 1 attribute 348s attribute(s): 348s Min. 1st Qu. Median Mean 3rd Qu. Max. 348s max 55 85 96 99.36018 113 255 348s dimension(s): 348s from to offset delta refsys point x/y 348s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 348s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 348s > st_apply(x, 1:2, range) 349s stars object with 3 dimensions and 1 attribute 349s attribute(s): 349s Min. 1st Qu. Median Mean 3rd Qu. Max. 349s L7_ETMs.tif 1 50 71 72.43565 96 255 349s dimension(s): 349s from to offset delta refsys point x/y 349s range 1 2 NA NA NA NA 349s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 349s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 349s > 349s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 349s > x = read_stars(geomatrix) 349s > y = st_transform(x, st_crs(4326)) 349s > st_coordinates(x)[1:10,] 349s x y 349s 1 1841000 1144000 349s 2 1841002 1143995 349s 3 1841003 1143990 349s 4 1841004 1143985 349s 5 1841006 1143980 349s 6 1841008 1143975 349s 7 1841009 1143970 349s 8 1841010 1143965 349s 9 1841012 1143960 349s 10 1841014 1143955 349s > 349s > nc = system.file("nc/tos_O1_2001-2002.nc", package = "stars") 349s > if (nc != "" && require(PCICt, quietly = TRUE)) { 349s + print(x <- read_stars(nc)) 349s + print(st_bbox(x)) 349s + s = st_as_stars(st_bbox(x)) # inside = NA 349s + print(st_bbox(s)) 349s + s = st_as_stars(st_bbox(x), inside = TRUE) 349s + print(st_bbox(s)) 349s + s = st_as_stars(st_bbox(x), inside = FALSE) 349s + print(st_bbox(s)) 349s + (s = st_as_stars(st_bbox(x), dy = 1)) 349s + print(st_bbox(s)) 349s + print(identical(st_as_stars(st_bbox(x), dx = 1), st_as_stars(st_bbox(x), dy = 1))) 349s + s = st_as_stars(st_bbox(x), dx = 10) 349s + print(st_bbox(s)) 349s + s = st_as_stars(st_bbox(x), dx = 20) 349s + print(st_bbox(s)) 349s + x1 = x 349s + st_crs(x1) = "OGC:CRS84" 349s + print(identical(st_as_stars(st_bbox(x1), dx = 1), st_as_stars(st_bbox(x1), dx = units::set_units(1, degree)))) 349s + 349s + df = as.data.frame(x) 349s + if (require(units, quietly = TRUE)) 349s + print(units::drop_units(x)) 349s + 349s + print(dimnames(x)) 349s + dimnames(x) <- letters[1:3] 349s + print(dimnames(x)) 349s + } # PCICt 349s > 349s > st_as_stars() 349s stars object with 2 dimensions and 1 attribute 349s attribute(s): 349s Min. 1st Qu. Median Mean 3rd Qu. Max. 349s values 0 0 0 0 0 0 349s dimension(s): 349s from to offset delta refsys x/y 349s x 1 360 -180 1 WGS 84 (CRS84) [x] 349s y 1 180 90 -1 WGS 84 (CRS84) [y] 349s > 349s > # multiple sub-datasets: 349s > nc_red = system.file("nc/reduced.nc", package = "stars") 349s > red = read_stars(nc_red) 349s sst, anom, err, ice, 349s > red 349s stars object with 4 dimensions and 4 attributes 349s attribute(s): 349s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 349s sst [degree_Celsius] -1.80 -0.03 13.655 12.9940841 24.8125 32.97 4448 349s anom [degree_Celsius] -10.16 -0.58 -0.080 -0.1855812 0.2100 2.99 4448 349s err [degree_Celsius] 0.11 0.16 0.270 0.2626872 0.3200 0.84 4448 349s ice [percent] 0.01 0.47 0.920 0.7178118 0.9600 1.00 13266 349s dimension(s): 349s from to offset delta refsys x/y 349s x 1 180 -1 2 NA [x] 349s y 1 90 90 -2 NA [y] 349s zlev 1 1 0 [m] NA NA 349s time 1 1 1981-12-31 UTC NA POSIXct 349s > plot(red) 350s > 350s > x = st_xy2sfc(read_stars(tif)[,1:10,1:10,], as_points = FALSE) 350s > st_bbox(x) 350s xmin ymin xmax ymax 350s 288776.3 9120475.8 289061.3 9120760.8 350s > x = read_stars(tif) 350s > merge(split(x, "band")) 350s stars object with 3 dimensions and 1 attribute 350s attribute(s): 350s Min. 1st Qu. Median Mean 3rd Qu. Max. 350s X1.X2.X3.X4.X5.X6 1 54 69 68.91242 86 255 350s dimension(s): 351s from to offset delta refsys point values 351s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 351s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL 351s attributes 1 6 NA NA NA NA X1,...,X6 351s x/y 351s x [x] 351s y [y] 351s attributes 351s > 351s > read_stars(c(tif,tif)) # merges as attributes 351s stars object with 3 dimensions and 2 attributes 351s attribute(s): 351s Min. 1st Qu. Median Mean 3rd Qu. Max. 351s L7_ETMs.tif 1 54 69 68.91242 86 255 351s L7_ETMs.tif.1 1 54 69 68.91242 86 255 351s dimension(s): 351s from to offset delta refsys point x/y 351s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 351s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 351s band 1 6 NA NA NA NA 351s > read_stars(c(tif,tif), along = "sensor") 351s stars object with 4 dimensions and 1 attribute 351s attribute(s), summary of first 1e+05 cells: 351s Min. 1st Qu. Median Mean 3rd Qu. Max. 351s L7_ETMs.tif 47 65 76 77.3419 87 255 351s dimension(s): 351s from to offset delta refsys point x/y 351s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 351s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 351s band 1 6 NA NA NA NA 351s sensor 1 2 NA NA NA NA 351s > read_stars(c(tif,tif), along = 4) 351s stars object with 4 dimensions and 1 attribute 351s attribute(s), summary of first 1e+05 cells: 351s Min. 1st Qu. Median Mean 3rd Qu. Max. 351s L7_ETMs.tif 47 65 76 77.3419 87 255 351s dimension(s): 351s from to offset delta refsys point x/y 351s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 351s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 351s band 1 6 NA NA NA NA 351s new_dim 1 2 NA NA NA NA 351s > read_stars(c(tif,tif), along = "band") 351s stars object with 3 dimensions and 1 attribute 351s attribute(s), summary of first 1e+05 cells: 351s Min. 1st Qu. Median Mean 3rd Qu. Max. 351s L7_ETMs.tif 47 65 76 77.3419 87 255 351s dimension(s): 351s from to offset delta refsys point x/y 351s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 351s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 351s band 1 12 NA NA NA NA 351s > read_stars(c(tif,tif), along = 3) 352s stars object with 3 dimensions and 1 attribute 352s attribute(s), summary of first 1e+05 cells: 352s Min. 1st Qu. Median Mean 3rd Qu. Max. 352s L7_ETMs.tif 47 65 76 77.3419 87 255 352s dimension(s): 352s from to offset delta refsys point x/y 352s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 352s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 352s band 1 12 NA NA NA NA 352s > 352s > # cut: 352s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 352s > x = read_stars(tif) 352s > cut(x, c(0, 50, 100, 255)) 352s stars object with 3 dimensions and 1 attribute 352s attribute(s): 352s L7_ETMs.tif 352s (0,50] :156060 352s (50,100] :503764 352s (100,255]: 77264 352s dimension(s): 352s from to offset delta refsys point x/y 352s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 352s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 352s band 1 6 NA NA NA NA 352s > cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255)) 352s stars object with 2 dimensions and 1 attribute 352s attribute(s): 352s L7_ETMs.tif 352s (0,50] : 1 352s (50,100] :117134 352s (100,255]: 5713 352s dimension(s): 352s from to offset delta refsys point x/y 352s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 352s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 352s > plot(cut(x[,,,1,drop=TRUE], c(0, 50, 100, 255))) 352s > 352s > st_bbox(st_dimensions(x)) 352s xmin ymin xmax ymax 352s 288776.3 9110728.8 298722.8 9120760.8 352s > x[x < 0] = NA 352s > x[is.na(x)] = 0 352s > 352s > # c: 352s > f = system.file("netcdf/avhrr-only-v2.19810902.nc", package = "starsdata") 352s > if (FALSE && f != "") { 352s + files = c("avhrr-only-v2.19810901.nc", 352s + "avhrr-only-v2.19810902.nc", 352s + "avhrr-only-v2.19810903.nc", 352s + "avhrr-only-v2.19810904.nc", 352s + "avhrr-only-v2.19810905.nc", 352s + "avhrr-only-v2.19810906.nc", 352s + "avhrr-only-v2.19810907.nc", 352s + "avhrr-only-v2.19810908.nc", 352s + "avhrr-only-v2.19810909.nc") 352s + l = list() 352s + for (f in files) { 352s + from = system.file(paste0("netcdf/", f), package = "starsdata") 352s + l[[f]] = read_stars(from, sub = c("sst", "anom")) 352s + } 352s + ret = do.call(c, l) 352s + print(ret) 352s + ret = adrop(c(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + 0:2))) 352s + print(ret) 352s + #ret = adrop(adrop(c(l[[1]], l[[2]], l[[3]], along = "times"))) 352s + #print(ret) 352s + } 352s > 352s > st_dimensions(list(matrix(1, 4, 4))) # st_dimensions.default 352s from to point values 352s X1 1 1 FALSE 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1 352s > 352s > if (FALSE && require("starsdata", quietly = TRUE)) { 352s + # curvilinear: 352s + s5p = system.file( 352s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 352s + package = "starsdata") 352s + print(s5p) 352s + lat_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/latitude") 352s + lon_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/longitude") 352s + nit_ds = paste0("HDF5:\"", s5p, "\"://PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column") 352s + lat = read_stars(lat_ds) 352s + lon = read_stars(lon_ds) 352s + nit = read_stars(nit_ds) 352s + nit[[1]][nit[[1]] > 9e+36] = NA 352s + 352s + ll = setNames(c(lon, lat), c("x", "y")) 352s + nit.c = st_as_stars(nit, curvilinear = ll) 352s + print(nit.c) 352s + 352s + s5p = system.file( 352s + "sentinel5p/S5P_NRTI_L2__NO2____20180717T120113_20180717T120613_03932_01_010002_20180717T125231.nc", 352s + package = "starsdata") 352s + nit.c2 = read_stars(s5p, 352s + sub = "//PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column", 352s + curvilinear = c("//PRODUCT/latitude", "//PRODUCT/longitude")) 352s + print(all.equal(nit.c, nit.c2)) 352s + } 352s > 352s BEGIN TEST subset.R 352s 352s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 352s Copyright (C) 2024 The R Foundation for Statistical Computing 352s Platform: arm-unknown-linux-gnueabihf (32-bit) 352s 352s R is free software and comes with ABSOLUTELY NO WARRANTY. 352s You are welcome to redistribute it under certain conditions. 352s Type 'license()' or 'licence()' for distribution details. 352s 352s R is a collaborative project with many contributors. 352s Type 'contributors()' for more information and 352s 'citation()' on how to cite R or R packages in publications. 352s 352s Type 'demo()' for some demos, 'help()' for on-line help, or 352s 'help.start()' for an HTML browser interface to help. 352s Type 'q()' to quit R. 352s 352s > suppressPackageStartupMessages(library(stars)) 353s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 353s > x = read_stars(tif) 353s > y = st_set_dimensions(x, "band", point = TRUE) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA TRUE 1,...,2 353s > y = st_set_dimensions(x, "band", point = NA) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA NA [1,2),...,[2,3) 353s > y = st_set_dimensions(x, "band", point = FALSE) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA FALSE [1,2),...,[2,3) 353s > y = st_set_dimensions(x, "band", values = letters[1:6]) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA NA a,...,b 353s > y = st_set_dimensions(x, "band", values = letters[1:6], point = NA) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA NA a,...,b 353s > y = st_set_dimensions(x, "band", values = letters[1:6], point = TRUE) 353s > y[,1:10, 1:10, c(1,4,3,2)] 353s stars object with 3 dimensions and 1 attribute 353s attribute(s): 353s Min. 1st Qu. Median Mean 3rd Qu. Max. 353s L7_ETMs.tif 25 45 57 56.535 64 97 353s dimension(s): 353s from to offset delta refsys point values x/y 353s x 1 10 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [x] 353s y 1 10 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE NULL [y] 353s band 1 4 NA NA NA TRUE a,...,b 353s > 353s BEGIN TEST testthat.R 353s 353s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 353s Copyright (C) 2024 The R Foundation for Statistical Computing 353s Platform: arm-unknown-linux-gnueabihf (32-bit) 353s 353s R is free software and comes with ABSOLUTELY NO WARRANTY. 353s You are welcome to redistribute it under certain conditions. 353s Type 'license()' or 'licence()' for distribution details. 353s 353s R is a collaborative project with many contributors. 353s Type 'contributors()' for more information and 353s 'citation()' on how to cite R or R packages in publications. 353s 353s Type 'demo()' for some demos, 'help()' for on-line help, or 353s 'help.start()' for an HTML browser interface to help. 353s Type 'q()' to quit R. 353s 353s > ## load dependencies 353s > library(testthat) 353s > suppressPackageStartupMessages(library(stars)) 354s > 354s > ## test package 354s > test_check("stars") 361s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 361s 361s == Skipped tests (5) =========================================================== 361s * On CRAN (4): 'test_ncdf.R:1:1', 'test_ncproxy.R:1:1', 'test_osm.R:4:3', 361s 'test_rectilinear.R:89:3' 361s * cubble cannot be loaded (1): 'test_cubble.R:2:3' 361s 361s [ FAIL 0 | WARN 0 | SKIP 5 | PASS 69 ] 361s > 361s BEGIN TEST tidy.R 361s 361s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 361s Copyright (C) 2024 The R Foundation for Statistical Computing 361s Platform: arm-unknown-linux-gnueabihf (32-bit) 361s 361s R is free software and comes with ABSOLUTELY NO WARRANTY. 361s You are welcome to redistribute it under certain conditions. 361s Type 'license()' or 'licence()' for distribution details. 361s 361s R is a collaborative project with many contributors. 361s Type 'contributors()' for more information and 361s 'citation()' on how to cite R or R packages in publications. 361s 361s Type 'demo()' for some demos, 'help()' for on-line help, or 361s 'help.start()' for an HTML browser interface to help. 361s Type 'q()' to quit R. 361s 361s > suppressPackageStartupMessages(library(stars)) 362s > 362s > if (require(dplyr, quietly = TRUE)) { 362s + tif = system.file("tif/L7_ETMs.tif", package = "stars") 362s + x <- read_stars(tif) 362s + (y <- x %>% select(L7_ETMs.tif)) 362s + (y <- x %>% filter(band > 2)) 362s + (z <- x %>% mutate(foo = 2* L7_ETMs.tif)) 362s + x %>% pull(L7_ETMs.tif) %>% class() 362s + x %>% filter(x > 289900) 362s + x %>% slice("x", 50:100) 362s + 362s + suppressPackageStartupMessages(library(ggplot2)) 362s + ggplot() + geom_stars(data = x) + coord_equal() + facet_wrap(~band) 362s + ggplot() + geom_stars(data = x[,c(1:50,52:100),c(1:45, 50:60)]) + 362s + coord_equal() 362s + ggplot() + geom_stars(data = x[,1:10,1:10,1:2], sf = TRUE) + facet_wrap(~band) 362s + 362s + 362s + # see https://github.com/r-spatial/stars/issues/539 : 362s + x <- read_stars(system.file("tif/L7_ETMs.tif", package = "stars")) 362s + y <- transmute(x, L7_ETMs.tif = units::set_units(L7_ETMs.tif, degree_C)) # same as x but with units 362s + 362s + x - slice(x, 'band', 1) # runs as expected, recycling the second object 362s + try(y - slice(x, 'band', 1)) # fails as expected because x is unitless 362s + try(x - slice(y, 'band', 1)) # fails as expected 362s + y - slice(y, 'band', 1) # runs as expected 362s + } 362s 362s Attaching package: 'dplyr' 362s 362s The following objects are masked from 'package:stats': 362s 362s filter, lag 362s 362s The following objects are masked from 'package:base': 362s 362s intersect, setdiff, setequal, union 362s 363s Error in Ops.units(X[[i]], ...) : 363s both operands of the expression should be "units" objects 363s Error in Ops.units(X[[i]], ...) : 363s both operands of the expression should be "units" objects 363s stars object with 3 dimensions and 1 attribute 363s attribute(s): 363s Min. 1st Qu. Median Mean 3rd Qu. Max. 363s L7_ETMs.tif [degree_Celsius] -184 -19 -8 -10.2353 0 131 363s dimension(s): 363s from to offset delta refsys point x/y 363s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 363s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 363s band 1 6 NA NA NA NA 363s > 363s BEGIN TEST transform.R 363s 363s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 363s Copyright (C) 2024 The R Foundation for Statistical Computing 363s Platform: arm-unknown-linux-gnueabihf (32-bit) 363s 363s R is free software and comes with ABSOLUTELY NO WARRANTY. 363s You are welcome to redistribute it under certain conditions. 363s Type 'license()' or 'licence()' for distribution details. 363s 363s R is a collaborative project with many contributors. 363s Type 'contributors()' for more information and 363s 'citation()' on how to cite R or R packages in publications. 363s 363s Type 'demo()' for some demos, 'help()' for on-line help, or 363s 'help.start()' for an HTML browser interface to help. 363s Type 'q()' to quit R. 363s 363s > suppressPackageStartupMessages(library(stars)) 364s > suppressPackageStartupMessages(library(lwgeom)) 364s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 364s > (x = read_stars(geomatrix)) 364s stars object with 2 dimensions and 1 attribute 364s attribute(s): 364s Min. 1st Qu. Median Mean 3rd Qu. Max. 364s geomatrix.tif 74 107 123 126.765 132 255 364s dimension(s): 364s from to offset delta refsys point x/y 364s x 1 20 1841002 1.5 WGS 84 / UTM zone 11N TRUE [x] 364s y 1 20 1144003 -1.5 WGS 84 / UTM zone 11N TRUE [y] 364s sheared raster with parameters: -5 -5 364s > new = st_crs(4326) 364s > y = st_transform(x, new) 364s > plot(st_transform(st_as_sfc(st_bbox(x)), new), col = NA, border = 'red') 364s > plot(st_as_sfc(y, as_points=FALSE), col = NA, border = 'green', axes = TRUE, add = TRUE) 364s > image(y, add = TRUE) 364s > plot(st_as_sfc(y, as_points=TRUE), pch=3, cex=.5, col = 'blue', add = TRUE) 364s > plot(st_transform(st_as_sfc(x, as_points=FALSE), new), add = TRUE) 364s > 364s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 364s > x = read_stars(tif)[,1:10,1:10,1:3] 364s > x_ = st_transform(x, st_crs(4326)) 364s > x__ = st_transform_proj(x, st_crs(4326)$proj4string) 364s > st_crs(x_) = st_crs(x__) 364s > all.equal(x_,x__) 364s [1] TRUE 364s > 364s > # x__ = st_transform(x, x_) #now in st_warp 364s > # all.equal(x_, x__) 364s > 364s > x = st_xy2sfc(x, as_points = FALSE) 364s > (x_ = st_transform(x, st_crs(4326))) 364s stars object with 2 dimensions and 1 attribute 364s attribute(s): 364s Min. 1st Qu. Median Mean 3rd Qu. Max. 364s L7_ETMs.tif 25 43 51 50.72 60 74 364s dimension(s): 364s from to refsys point 364s geometry 1 100 WGS 84 FALSE 364s band 1 3 NA NA 364s values 364s geometry POLYGON ((-34.91617 -7.94...,...,POLYGON ((-34.91385 -7.95... 364s band NULL 364s > (x__ = st_transform_proj(x, st_crs(4326))) 364s stars object with 2 dimensions and 1 attribute 364s attribute(s): 364s Min. 1st Qu. Median Mean 3rd Qu. Max. 364s L7_ETMs.tif 25 43 51 50.72 60 74 364s dimension(s): 364s from to refsys point 364s geometry 1 100 WGS 84 FALSE 364s band 1 3 NA NA 364s values 364s geometry POLYGON ((-34.91617 -7.94...,...,POLYGON ((-34.91385 -7.95... 364s band NULL 364s > all.equal(x_,x__,check.attributes = FALSE) 364s [1] TRUE 364s > 364s > # nothing to transform: now errs: 364s > try(st_transform(st_as_stars(list(matrix(1,10,10))), st_crs(4326))) 364s Error in st_transform.stars(st_as_stars(list(matrix(1, 10, 10))), st_crs(4326)) : 364s !is.na(st_crs(x)) is not TRUE 364s > try(st_transform_proj(st_as_stars(list(matrix(1,10,10))), st_crs(4326))) 364s > 364s Error in st_transform_proj.stars(st_as_stars(list(matrix(1, 10, 10))), : 364s !is.na(st_crs(x)) is not TRUE 364s BEGIN TEST warp.R 364s 364s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 364s Copyright (C) 2024 The R Foundation for Statistical Computing 364s Platform: arm-unknown-linux-gnueabihf (32-bit) 364s 364s R is free software and comes with ABSOLUTELY NO WARRANTY. 364s You are welcome to redistribute it under certain conditions. 364s Type 'license()' or 'licence()' for distribution details. 364s 364s R is a collaborative project with many contributors. 364s Type 'contributors()' for more information and 364s 'citation()' on how to cite R or R packages in publications. 364s 364s Type 'demo()' for some demos, 'help()' for on-line help, or 364s 'help.start()' for an HTML browser interface to help. 364s Type 'q()' to quit R. 364s 364s > suppressPackageStartupMessages(library(stars)) 365s > geomatrix = system.file("tif/geomatrix.tif", package = "stars") 365s > x = read_stars(geomatrix) 365s > # can stars reproduce what gdal does, by default? 365s > x2 = st_warp(x, use_gdal = TRUE, no_data_value = -9999) 365s > y = st_warp(x, x2) 365s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE) } 365s > if (interactive()) { plot(y, breaks = "equal", axes=TRUE) } 365s > names(x2) = names(y) 365s > all.equal(x2, y) # yes? 365s [1] TRUE 365s > 365s > # does gdal reproduce with stars template object? 365s > (x2 = setNames(st_warp(x, y, use_gdal = TRUE, no_data_value=-1), "file.tif")) 365s stars object with 2 dimensions and 1 attribute 365s attribute(s): 365s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 365s file.tif 74 115 123 126.4289 132 255 224 365s dimension(s): 365s from to offset delta refsys point x/y 365s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 365s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 365s > 365s > # does gdal reproduce what stars does, default cell size? 365s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE)) 365s stars object with 2 dimensions and 1 attribute 365s attribute(s): 365s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 365s geomatrix.tif 74 115 123 126.4289 132 255 224 365s dimension(s): 365s from to offset delta refsys x/y 365s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N [x] 365s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N [y] 365s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 365s stars object with 2 dimensions and 1 attribute 365s attribute(s): 365s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 365s file.tif 74 115 123 126.4289 132 255 224 365s dimension(s): 365s from to offset delta refsys point x/y 365s x 1 25 1840902 5.22 WGS 84 / UTM zone 11N FALSE [x] 365s y 1 25 1144003 -5.22 WGS 84 / UTM zone 11N FALSE [y] 365s > 365s > # try with multiple bands: 365s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 365s > (x1 = read_stars(tif)) 365s stars object with 3 dimensions and 1 attribute 365s attribute(s): 365s Min. 1st Qu. Median Mean 3rd Qu. Max. 365s L7_ETMs.tif 1 54 69 68.91242 86 255 365s dimension(s): 365s from to offset delta refsys point x/y 365s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 365s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 365s band 1 6 NA NA NA NA 365s > tifcp = tempfile(fileext = ".tif") 365s > file.copy(tif, tifcp) 365s [1] TRUE 365s > x1p = read_stars(tifcp, proxy = TRUE) 365s > st_dimensions(x1p) 365s from to offset delta refsys point x/y 365s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 365s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 365s band 1 6 NA NA NA NA 365s > (x1a = st_warp(x1, crs = st_crs(4326))) 366s stars object with 3 dimensions and 1 attribute 366s attribute(s): 366s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 366s L7_ETMs.tif 1 54 69 68.93072 86 255 8778 366s dimension(s): 366s from to offset delta refsys x/y 366s x 1 350 -34.92 0.0002592 WGS 84 [x] 366s y 1 352 -7.95 -0.0002592 WGS 84 [y] 366s band 1 6 NA NA NA 366s > (x1b = setNames(st_warp(x1, x1p, use_gdal = TRUE, no_data_value=-1), "file.tif")) 366s stars object with 3 dimensions and 1 attribute 366s attribute(s): 366s Min. 1st Qu. Median Mean 3rd Qu. Max. 366s file.tif 1 54 69 68.91242 86 255 366s dimension(s): 366s from to offset delta refsys point x/y 366s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 366s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 366s band 1 6 NA NA NA NA 366s > 366s > # does gdal reproduce what stars does? Smaller grid: 366s > (x2 = st_warp(x, crs = st_crs(x), use_gdal = FALSE, cellsize = 3)) 366s stars object with 2 dimensions and 1 attribute 366s attribute(s): 366s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 366s geomatrix.tif 74 107 123 126.6857 132 255 727 366s dimension(s): 366s from to offset delta refsys x/y 366s x 1 44 1840902 3 WGS 84 / UTM zone 11N [x] 366s y 1 44 1144003 -3 WGS 84 / UTM zone 11N [y] 366s > # x2 = x2[,2:43,2:43] 366s > if (interactive()) { plot(x2, breaks = "equal", axes=TRUE, reset = FALSE) } 366s > if (interactive()) { plot(st_as_sfc(st_bbox(x2)), add = TRUE, col = NA, border = 'red') } 366s > ### doesn't work: FIXME: check with more recent GDAL: 366s > (y = setNames(st_warp(x, x2, use_gdal = TRUE, debug = FALSE, no_data_value=-1), "file.tif")) 366s stars object with 2 dimensions and 1 attribute 366s attribute(s): 366s Min. 1st Qu. Median Mean 3rd Qu. Max. NA's 366s file.tif 74 107 123 126.6584 132 255 727 366s dimension(s): 366s from to offset delta refsys point x/y 366s x 1 44 1840902 3 WGS 84 / UTM zone 11N FALSE [x] 366s y 1 44 1144003 -3 WGS 84 / UTM zone 11N FALSE [y] 366s > if (interactive()) { plot(y, breaks = "equal") } 366s > names(x2) = names(y) 366s > # isTRUE(all.equal(x2, y, check.attributes=FALSE)) 366s > mean(as.vector(x2[[1]]==y[[1]]), na.rm = TRUE) 366s [1] 0.9958644 366s > unique(as.vector(x2[[1]]-y[[1]])) 366s [1] NA 0 -33 -25 25 49 17 366s > 366s > g = st_as_stars() 366s > attr(g, "dimensions")$x$offset = 0 366s > g$values = as.vector(t(matrix(seq_len(prod(dim(g))), 180, 360))) 366s > if (interactive()) { plot(g, axes=TRUE) } 366s > a = st_warp(g, st_as_stars(), use_gdal=FALSE) 366s > b = st_warp(g, st_as_stars(), use_gdal=TRUE, no_data_value = -1) 366s > all.equal(a, b, check.attributes = FALSE) 366s [1] TRUE 366s > 366s BEGIN TEST write.R 366s 366s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 366s Copyright (C) 2024 The R Foundation for Statistical Computing 366s Platform: arm-unknown-linux-gnueabihf (32-bit) 366s 366s R is free software and comes with ABSOLUTELY NO WARRANTY. 366s You are welcome to redistribute it under certain conditions. 366s Type 'license()' or 'licence()' for distribution details. 366s 366s R is a collaborative project with many contributors. 366s Type 'contributors()' for more information and 366s 'citation()' on how to cite R or R packages in publications. 366s 366s Type 'demo()' for some demos, 'help()' for on-line help, or 366s 'help.start()' for an HTML browser interface to help. 366s Type 'q()' to quit R. 366s 366s > suppressPackageStartupMessages(library(stars)) 367s > 367s > tif = system.file("tif/L7_ETMs.tif", package = "stars") 367s > (x = read_stars(tif)) 367s stars object with 3 dimensions and 1 attribute 367s attribute(s): 367s Min. 1st Qu. Median Mean 3rd Qu. Max. 367s L7_ETMs.tif 1 54 69 68.91242 86 255 367s dimension(s): 367s from to offset delta refsys point x/y 367s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 367s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 367s band 1 6 NA NA NA NA 367s > 367s > # write stars object: 367s > write_stars(x, tempfile(), driver = "GTiff") 367s > 367s > # write stars_proxy object: 367s > (x = read_stars(tif, proxy = TRUE)) 367s stars_proxy object with 1 attribute in 1 file(s): 367s $L7_ETMs.tif 367s [1] "[...]/L7_ETMs.tif" 367s 367s dimension(s): 367s from to offset delta refsys point x/y 367s x 1 349 288776 28.5 SIRGAS 2000 / UTM zone 25S FALSE [x] 367s y 1 352 9120761 -28.5 SIRGAS 2000 / UTM zone 25S FALSE [y] 367s band 1 6 NA NA NA NA 367s > write_stars(x, tempfile(), driver = "GTiff") 367s 367s > 367s autopkgtest [08:36:35]: test run-unit-test: -----------------------] 372s autopkgtest [08:36:40]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 372s run-unit-test PASS 376s autopkgtest [08:36:44]: test pkg-r-autopkgtest: preparing testbed 403s autopkgtest [08:37:11]: testbed dpkg architecture: armhf 405s autopkgtest [08:37:13]: testbed apt version: 2.7.14build2 405s autopkgtest [08:37:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 413s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [73.9 kB] 413s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [3388 B] 413s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [1964 B] 413s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [497 kB] 413s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [53.5 kB] 413s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [112 kB] 413s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [432 kB] 413s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1968 B] 414s Fetched 1176 kB in 1s (1372 kB/s) 414s Reading package lists... 430s tee: /proc/self/fd/2: Permission denied 451s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 451s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 451s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 451s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 452s Reading package lists... 452s Reading package lists... 453s Building dependency tree... 453s Reading state information... 453s Calculating upgrade... 454s The following package was automatically installed and is no longer required: 454s libatm1t64 454s Use 'apt autoremove' to remove it. 454s The following packages will be upgraded: 454s apt apt-utils bash-completion curl dhcpcd-base dpkg dpkg-dev dracut-install 454s fwupd gcc-14-base gir1.2-girepository-2.0 gir1.2-glib-2.0 groff-base 454s initramfs-tools initramfs-tools-bin initramfs-tools-core iproute2 454s klibc-utils libapt-pkg6.0t64 libbsd0 libc-bin libc6 libcurl3t64-gnutls 454s libcurl4t64 libdpkg-perl libevent-core-2.1-7t64 libfwupd2 libgcc-s1 454s libgcrypt20 libgirepository-1.0-1 libglib2.0-0t64 libglib2.0-data libklibc 454s liblocale-gettext-perl liblz4-1 libperl5.38t64 libsqlite3-0 libstdc++6 454s libuv1t64 libxcb1 locales man-db perl perl-base perl-modules-5.38 454s python-apt-common python3-apt python3-jinja2 python3-pyparsing python3-six 454s python3-typing-extensions rsync tzdata vim-common vim-tiny xxd 454s 56 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 454s Need to get 37.3 MB of archives. 454s After this operation, 545 kB of additional disk space will be used. 454s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-14-base armhf 14.1.0-1ubuntu1 [48.4 kB] 454s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-s1 armhf 14.1.0-1ubuntu1 [41.5 kB] 454s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++6 armhf 14.1.0-1ubuntu1 [714 kB] 455s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf libc6 armhf 2.39-0ubuntu8.1 [2828 kB] 455s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf libgcrypt20 armhf 1.10.3-3 [454 kB] 455s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf liblz4-1 armhf 1.9.4-2 [58.0 kB] 455s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf libapt-pkg6.0t64 armhf 2.9.3 [1013 kB] 455s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf dpkg armhf 1.22.6ubuntu10 [1230 kB] 455s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf libperl5.38t64 armhf 5.38.2-4 [4102 kB] 455s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf perl armhf 5.38.2-4 [231 kB] 455s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf perl-base armhf 5.38.2-4 [1671 kB] 455s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf perl-modules-5.38 all 5.38.2-4 [3110 kB] 455s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf libc-bin armhf 2.39-0ubuntu8.1 [530 kB] 455s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf apt armhf 2.9.3 [1397 kB] 455s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf apt-utils armhf 2.9.3 [217 kB] 455s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf liblocale-gettext-perl armhf 1.07-7 [14.8 kB] 455s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf rsync armhf 3.3.0-1 [414 kB] 455s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf dhcpcd-base armhf 1:10.0.6-5 [186 kB] 455s Get:19 http://ftpmaster.internal/ubuntu oracular/main armhf gir1.2-girepository-2.0 armhf 1.80.1-3 [24.7 kB] 455s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf gir1.2-glib-2.0 armhf 2.80.2-1ubuntu1 [182 kB] 455s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf libglib2.0-0t64 armhf 2.80.2-1ubuntu1 [1421 kB] 455s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf libgirepository-1.0-1 armhf 1.80.1-3 [107 kB] 455s Get:23 http://ftpmaster.internal/ubuntu oracular/main armhf iproute2 armhf 6.9.0-1 [1083 kB] 455s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libbsd0 armhf 0.12.2-1 [36.5 kB] 455s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf libglib2.0-data all 2.80.2-1ubuntu1 [49.3 kB] 455s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf libsqlite3-0 armhf 3.45.3-1 [601 kB] 455s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf locales all 2.39-0ubuntu8.1 [4234 kB] 455s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf python-apt-common all 2.9.0 [20.1 kB] 455s Get:29 http://ftpmaster.internal/ubuntu oracular/main armhf python3-apt armhf 2.9.0 [162 kB] 455s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf tzdata all 2024a-4ubuntu1 [274 kB] 455s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf vim-tiny armhf 2:9.1.0377-1ubuntu1 [670 kB] 455s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf vim-common all 2:9.1.0377-1ubuntu1 [385 kB] 455s Get:33 http://ftpmaster.internal/ubuntu oracular/main armhf xxd armhf 2:9.1.0377-1ubuntu1 [63.0 kB] 455s Get:34 http://ftpmaster.internal/ubuntu oracular/main armhf bash-completion all 1:2.14.0-1 [206 kB] 455s Get:35 http://ftpmaster.internal/ubuntu oracular/main armhf groff-base armhf 1.23.0-4 [946 kB] 455s Get:36 http://ftpmaster.internal/ubuntu oracular/main armhf libuv1t64 armhf 1.48.0-4 [83.2 kB] 455s Get:37 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb1 armhf 1.17.0-2 [46.3 kB] 455s Get:38 http://ftpmaster.internal/ubuntu oracular/main armhf man-db armhf 2.12.1-1 [1201 kB] 455s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf curl armhf 8.5.0-2ubuntu10.1 [219 kB] 455s Get:40 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl4t64 armhf 8.5.0-2ubuntu10.1 [296 kB] 455s Get:41 http://ftpmaster.internal/ubuntu oracular/main armhf dpkg-dev all 1.22.6ubuntu10 [1074 kB] 455s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf libdpkg-perl all 1.22.6ubuntu10 [269 kB] 455s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf dracut-install armhf 060+5-8ubuntu1 [34.3 kB] 455s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl3t64-gnutls armhf 8.5.0-2ubuntu10.1 [290 kB] 455s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf libfwupd2 armhf 1.9.20-1 [126 kB] 455s Get:46 http://ftpmaster.internal/ubuntu oracular/main armhf fwupd armhf 1.9.20-1 [4368 kB] 456s Get:47 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools all 0.142ubuntu27 [7898 B] 456s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools-core all 0.142ubuntu27 [49.5 kB] 456s Get:49 http://ftpmaster.internal/ubuntu oracular/main armhf initramfs-tools-bin armhf 0.142ubuntu27 [20.9 kB] 456s Get:50 http://ftpmaster.internal/ubuntu oracular/main armhf klibc-utils armhf 2.0.13-4ubuntu1 [93.8 kB] 456s Get:51 http://ftpmaster.internal/ubuntu oracular/main armhf libklibc armhf 2.0.13-4ubuntu1 [45.0 kB] 456s Get:52 http://ftpmaster.internal/ubuntu oracular/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-10 [82.5 kB] 456s Get:53 http://ftpmaster.internal/ubuntu oracular/main armhf python3-jinja2 all 3.1.3-1 [107 kB] 456s Get:54 http://ftpmaster.internal/ubuntu oracular/main armhf python3-pyparsing all 3.1.2-1 [86.4 kB] 456s Get:55 http://ftpmaster.internal/ubuntu oracular/main armhf python3-six all 1.16.0-6 [13.0 kB] 456s Get:56 http://ftpmaster.internal/ubuntu oracular/main armhf python3-typing-extensions all 4.11.0-1 [61.5 kB] 456s Preconfiguring packages ... 456s Fetched 37.3 MB in 2s (20.6 MB/s) 457s (Reading database ... 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Unable to replace "/usr/bin/man". apparmor_parser: Access denied. You need policy admin privileges to manage profiles. 473s 474s man-db.service is a disabled or a static unit not running, not starting it. 474s Setting up perl (5.38.2-4) ... 474s Setting up gir1.2-girepository-2.0:armhf (1.80.1-3) ... 474s Setting up libdpkg-perl (1.22.6ubuntu10) ... 474s Setting up initramfs-tools-core (0.142ubuntu27) ... 474s Setting up fwupd (1.9.20-1) ... 474s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 474s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 474s fwupd.service is a disabled or a static unit not running, not starting it. 474s Setting up initramfs-tools (0.142ubuntu27) ... 474s update-initramfs: deferring update (trigger activated) 474s Setting up dpkg-dev (1.22.6ubuntu10) ... 474s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 474s Processing triggers for dbus (1.14.10-4ubuntu4) ... 474s Processing triggers for initramfs-tools (0.142ubuntu27) ... 476s Reading package lists... 476s Building dependency tree... 476s Reading state information... 477s The following packages will be REMOVED: 477s libatm1t64* 477s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 477s After this operation, 94.2 kB disk space will be freed. 477s (Reading database ... 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559s Done 560s The following additional packages will be installed: 560s build-essential cpp cpp-13 cpp-13-arm-linux-gnueabihf 560s cpp-arm-linux-gnueabihf dctrl-tools fontconfig fontconfig-config 560s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 560s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 560s g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-13 560s gcc-13-arm-linux-gnueabihf gcc-13-base gcc-arm-linux-gnueabihf gdal-data 560s gdal-plugins gfortran gfortran-13 gfortran-13-arm-linux-gnueabihf 560s gfortran-arm-linux-gnueabihf icu-devtools javascript-common libaec0 libaom3 560s libarmadillo12 libarpack2t64 libasan8 libatomic1 libblas-dev libblas3 560s libblosc1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 560s libcfitsio10t64 libcrypt-dev libdatrie1 libde265-0 libdeflate-dev 560s libdeflate0 libfontconfig1 libfreetype6 libfreexl1 libfyba0t64 libgcc-13-dev 560s libgdal34t64 libgeos-c1t64 libgeos3.12.1t64 libgeotiff5 libgfortran-13-dev 560s libgfortran5 libgif7 libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt 560s libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec 560s libheif-plugin-libde265 libheif1 libice6 libicu-dev libisl23 libjbig0 560s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 560s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 560s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 560s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 560s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 560s libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64 560s libkmlengine1t64 liblapack-dev liblapack3 liblcms2-2 liblerc4 libltdl7 560s liblua5.4-0 liblzma-dev libminizip1t64 libmpc3 libmysqlclient21 560s libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 560s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 560s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 560s libpixman-1-0 libpkgconf3 libpng-dev libpoppler134 libpq5 libproj25 560s libqhull-r8.0 libreadline-dev librttopo1 libsharpyuv0 libsm6 libsnappy1v5 560s libspatialite8t64 libstdc++-13-dev libsuperlu6 libsz2 libtcl8.6 libthai-data 560s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libudunits2-0 560s libudunits2-data liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 560s libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 linux-libc-dev 560s littler mysql-common node-bootstrap-sass node-html5shiv node-normalize.css 560s pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data 560s r-base-core r-base-dev r-cran-abind r-cran-areal r-cran-askpass 560s r-cran-base64enc r-cran-bdsmatrix r-cran-brio r-cran-bslib r-cran-cachem 560s r-cran-cairo r-cran-callr r-cran-class r-cran-classint r-cran-cli 560s r-cran-clue r-cran-cluster r-cran-codetools r-cran-collapse 560s r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 560s r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc r-cran-diffobj 560s r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate r-cran-fansi 560s r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula 560s r-cran-fs r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 560s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 560s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv 560s r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib r-cran-jsonlite 560s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 560s r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lmtest 560s r-cran-lwgeom r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-mass 560s r-cran-matrix r-cran-maxlik r-cran-memoise r-cran-mgcv r-cran-mime 560s r-cran-misctools r-cran-munsell r-cran-ncdfgeom r-cran-ncmeta r-cran-nlme 560s r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict r-cran-pillar 560s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plm 560s r-cran-polyclip r-cran-praise r-cran-processx r-cran-promises r-cran-proxy 560s r-cran-ps r-cran-purrr r-cran-r6 r-cran-randomforest r-cran-rappdirs 560s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 560s r-cran-rcppeigen r-cran-rdpack r-cran-rematch2 r-cran-rex r-cran-rlang 560s r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot r-cran-s2 560s r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-shiny 560s r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 560s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 560s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 560s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi 560s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 560s r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 560s r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs 560s r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk 560s r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo rpcsvc-proto 560s unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 560s Suggested packages: 560s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 560s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 560s gdb-arm-linux-gnueabihf gfortran-doc gfortran-13-doc libcoarrays-dev apache2 560s | lighttpd | httpd liblapack-doc glibc-doc geotiff-bin gdal-bin 560s libgeotiff-epsg libhdf4-alt-dev hdf4-tools libheif-plugin-x265 560s libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc 560s libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-rav1e 560s libheif-plugin-svtenc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras 560s fonts-stix libjs-mathjax-doc liblcms2-utils liblzma-doc ncurses-doc 560s odbc-postgresql tdsodbc ogdi-bin proj-bin readline-doc libstdc++-13-doc 560s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 560s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 560s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 560s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 560s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 560s texlive-extra-utils texinfo r-cran-png r-cran-lpsolve r-cran-quadprog 560s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg 560s r-cran-rstudioapi r-cran-rmysql r-cran-sessioninfo r-cran-reshape2 560s r-cran-magick r-cran-getopt r-cran-mapproj r-cran-tinytest r-cran-bit64 560s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-vdiffr 560s r-cran-roxygen2 r-cran-inline r-cran-hmisc r-cran-rvest r-cran-spelling 560s r-cran-bench r-cran-blob r-cran-here r-cran-hms 560s Recommended packages: 560s bzip2-doc manpages manpages-dev libc-devtools proj-bin libheif-plugin-aomenc 560s node-jquery libpng-tools poppler-data r-recommended r-doc-html 560s r-cran-thematic r-cran-mockery r-cran-spelling r-cran-spdata r-cran-tinytest 560s r-cran-htmlwidgets r-cran-rstudioapi r-cran-whoami r-cran-data.table 560s r-cran-rcpparmadillo r-cran-xml2 r-cran-dt r-cran-bench r-cran-decor 560s r-cran-lobstr r-cran-progress r-cran-webutils r-cran-gh r-cran-broom 560s r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite 560s r-cran-unitizer r-cran-rsvg r-cran-rhpcblasctl r-cran-r.rsp r-cran-markdown 560s r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-multcomp r-cran-profvis 560s r-cran-quantreg r-cran-ragg r-cran-svglite r-cran-vdiffr r-cran-lintr 560s r-cran-pander r-cran-testit r-cran-jpeg r-cran-png r-cran-readr 560s r-cran-formatr r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 560s r-cran-tikzdevice r-cran-webshot node-highlight.js r-cran-tidyverse 560s r-cran-r.utils r-cran-geosphere r-cran-runit r-cran-pkgdown r-cran-zip 560s r-cran-ncdf4 r-cran-sodium r-cran-lubridate r-cran-bitops r-cran-mathjaxr 560s r-cran-mockr r-cran-remotes r-cran-aer r-cran-car r-cran-spdep 560s r-cran-statmod r-cran-urca r-cran-foreign r-cran-bookdown r-cran-webfakes 560s r-cran-cba r-cran-pingr r-cran-igraph r-cran-gstat r-cran-fields 560s r-cran-exactextractr r-cran-gbrd r-cran-usethis r-cran-dygraphs 560s r-cran-rsconnect r-cran-downlit r-cran-bit64 r-cran-dichromat r-cran-hms 560s r-cran-blob r-cran-nanoarrow r-cran-googlevis r-cran-isocodes r-cran-sftime 560s r-cran-sm r-cran-gsl r-cran-locfit r-cran-spatial r-cran-nleqslv 560s r-cran-glmnet r-cran-cubelyr r-cran-xml r-cran-formattable r-cran-zeallot 560s r-cran-renv r-cran-timeseries r-cran-timedate r-cran-tseries r-cran-chron 560s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 560s x11-xserver-utils 560s The following NEW packages will be installed: 560s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-arm-linux-gnueabihf 560s cpp-arm-linux-gnueabihf dctrl-tools fontconfig fontconfig-config 560s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 560s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 560s g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc gcc-13 560s gcc-13-arm-linux-gnueabihf gcc-13-base gcc-arm-linux-gnueabihf gdal-data 560s gdal-plugins gfortran gfortran-13 gfortran-13-arm-linux-gnueabihf 560s gfortran-arm-linux-gnueabihf icu-devtools javascript-common libaec0 libaom3 560s libarmadillo12 libarpack2t64 libasan8 libatomic1 libblas-dev libblas3 560s libblosc1 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 560s libcfitsio10t64 libcrypt-dev libdatrie1 libde265-0 libdeflate-dev 560s libdeflate0 libfontconfig1 libfreetype6 libfreexl1 libfyba0t64 libgcc-13-dev 560s libgdal34t64 libgeos-c1t64 libgeos3.12.1t64 libgeotiff5 libgfortran-13-dev 560s libgfortran5 libgif7 libgomp1 libgraphite2-3 libharfbuzz0b libhdf4-0-alt 560s libhdf5-103-1t64 libhdf5-hl-100t64 libheif-plugin-aomdec 560s libheif-plugin-libde265 libheif1 libice6 libicu-dev libisl23 libjbig0 560s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 560s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 560s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 560s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 560s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 560s libjs-twitter-bootstrap-datepicker libkmlbase1t64 libkmldom1t64 560s libkmlengine1t64 liblapack-dev liblapack3 liblcms2-2 liblerc4 libltdl7 560s liblua5.4-0 liblzma-dev libminizip1t64 libmpc3 libmysqlclient21 560s libncurses-dev libnetcdf19t64 libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 560s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 560s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 560s libpixman-1-0 libpkgconf3 libpng-dev libpoppler134 libpq5 libproj25 560s libqhull-r8.0 libreadline-dev librttopo1 libsharpyuv0 libsm6 libsnappy1v5 560s libspatialite8t64 libstdc++-13-dev libsuperlu6 libsz2 libtcl8.6 libthai-data 560s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libudunits2-0 560s libudunits2-data liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 560s libxerces-c3.2t64 libxft2 libxrender1 libxss1 libxt6t64 linux-libc-dev 560s littler mysql-common node-bootstrap-sass node-html5shiv node-normalize.css 560s pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin proj-data 560s r-base-core r-base-dev r-cran-abind r-cran-areal r-cran-askpass 560s r-cran-base64enc r-cran-bdsmatrix r-cran-brio r-cran-bslib r-cran-cachem 560s r-cran-cairo r-cran-callr r-cran-class r-cran-classint r-cran-cli 560s r-cran-clue r-cran-cluster r-cran-codetools r-cran-collapse 560s r-cran-colorspace r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 560s r-cran-curl r-cran-dbi r-cran-deldir r-cran-desc r-cran-diffobj 560s r-cran-digest r-cran-dplyr r-cran-e1071 r-cran-evaluate r-cran-fansi 560s r-cran-farver r-cran-fastmap r-cran-fnn r-cran-fontawesome r-cran-formula 560s r-cran-fs r-cran-future r-cran-future.apply r-cran-generics r-cran-ggforce 560s r-cran-ggplot2 r-cran-ggthemes r-cran-globals r-cran-glue r-cran-goftest 560s r-cran-gridextra r-cran-gtable r-cran-highr r-cran-htmltools r-cran-httpuv 561s r-cran-httr r-cran-intervals r-cran-isoband r-cran-jquerylib r-cran-jsonlite 561s r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later r-cran-lattice 561s r-cran-lazyeval r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lmtest 561s r-cran-lwgeom r-cran-magrittr r-cran-mapdata r-cran-maps r-cran-mass 561s r-cran-matrix r-cran-maxlik r-cran-memoise r-cran-mgcv r-cran-mime 561s r-cran-misctools r-cran-munsell r-cran-ncdfgeom r-cran-ncmeta r-cran-nlme 561s r-cran-openssl r-cran-parallelly r-cran-pbapply r-cran-pcict r-cran-pillar 561s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plm 561s r-cran-polyclip r-cran-praise r-cran-processx r-cran-promises r-cran-proxy 561s r-cran-ps r-cran-purrr r-cran-r6 r-cran-randomforest r-cran-rappdirs 561s r-cran-raster r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp 561s r-cran-rcppeigen r-cran-rdpack r-cran-rematch2 r-cran-rex r-cran-rlang 561s r-cran-rmarkdown r-cran-rnetcdf r-cran-rpart r-cran-rprojroot r-cran-s2 561s r-cran-sandwich r-cran-sass r-cran-scales r-cran-sf r-cran-shiny 561s r-cran-sourcetools r-cran-sp r-cran-spacetime r-cran-spatstat 561s r-cran-spatstat.data r-cran-spatstat.explore r-cran-spatstat.geom 561s r-cran-spatstat.linnet r-cran-spatstat.model r-cran-spatstat.random 561s r-cran-spatstat.sparse r-cran-spatstat.utils r-cran-stars r-cran-stringi 561s r-cran-stringr r-cran-survival r-cran-sys r-cran-systemfonts r-cran-tensor 561s r-cran-terra r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 561s r-cran-tinytex r-cran-tweenr r-cran-units r-cran-utf8 r-cran-vctrs 561s r-cran-viridis r-cran-viridislite r-cran-waldo r-cran-withr r-cran-wk 561s r-cran-xfun r-cran-xtable r-cran-xts r-cran-yaml r-cran-zoo rpcsvc-proto 561s unixodbc-common unzip x11-common xdg-utils zip zlib1g-dev 561s 0 upgraded, 341 newly installed, 0 to remove and 0 not upgraded. 561s Need to get 353 MB/353 MB of archives. 561s After this operation, 946 MB of additional disk space will be used. 561s Get:1 /tmp/autopkgtest.4JdhGU/2-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [904 B] 561s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libc-dev-bin armhf 2.39-0ubuntu8.1 [19.1 kB] 561s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf linux-libc-dev armhf 6.8.0-31.31 [1557 kB] 562s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] 562s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 562s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf libc6-dev armhf 2.39-0ubuntu8.1 [1351 kB] 562s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13-base armhf 13.2.0-23ubuntu4 [48.9 kB] 562s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf libisl23 armhf 0.26-3build1 [544 kB] 562s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf libmpc3 armhf 1.3.1-1build1 [46.7 kB] 562s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [8759 kB] 564s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-13 armhf 13.2.0-23ubuntu4 [1034 B] 564s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [5320 B] 564s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf cpp armhf 4:13.2.0-7ubuntu1 [22.4 kB] 564s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf libcc1-0 armhf 14.1.0-1ubuntu1 [43.3 kB] 564s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf libgomp1 armhf 14.1.0-1ubuntu1 [125 kB] 564s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf libatomic1 armhf 14.1.0-1ubuntu1 [7816 B] 564s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf libasan8 armhf 14.1.0-1ubuntu1 [2913 kB] 564s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf libubsan1 armhf 14.1.0-1ubuntu1 [1154 kB] 564s Get:19 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-13-dev armhf 13.2.0-23ubuntu4 [899 kB] 564s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [16.9 MB] 565s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13 armhf 13.2.0-23ubuntu4 [453 kB] 565s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [1220 B] 565s Get:23 http://ftpmaster.internal/ubuntu oracular/main armhf gcc armhf 4:13.2.0-7ubuntu1 [5022 B] 565s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++-13-dev armhf 13.2.0-23ubuntu4 [2456 kB] 565s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf g++-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [9941 kB] 565s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf g++-13 armhf 13.2.0-23ubuntu4 [14.5 kB] 565s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf g++-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [966 B] 565s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf g++ armhf 4:13.2.0-7ubuntu1 [1090 B] 565s Get:29 http://ftpmaster.internal/ubuntu oracular/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 565s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf dctrl-tools armhf 2.24-3build3 [94.7 kB] 565s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf libfreetype6 armhf 2.13.2+dfsg-1build3 [331 kB] 565s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 565s Get:33 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 565s Get:34 http://ftpmaster.internal/ubuntu oracular/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] 565s Get:35 http://ftpmaster.internal/ubuntu oracular/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] 565s Get:36 http://ftpmaster.internal/ubuntu oracular/main armhf fontconfig armhf 2.15.0-1.1ubuntu2 [189 kB] 565s Get:37 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 565s Get:38 http://ftpmaster.internal/ubuntu oracular/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 565s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 565s Get:40 http://ftpmaster.internal/ubuntu oracular/universe armhf gdal-data all 3.8.5+dfsg-1 [261 kB] 565s Get:41 http://ftpmaster.internal/ubuntu oracular/universe armhf gdal-plugins armhf 3.8.5+dfsg-1 [24.6 kB] 565s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran5 armhf 14.1.0-1ubuntu1 [311 kB] 565s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran-13-dev armhf 13.2.0-23ubuntu4 [359 kB] 565s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu4 [9182 kB] 566s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf gfortran-13 armhf 13.2.0-23ubuntu4 [11.7 kB] 566s Get:46 http://ftpmaster.internal/ubuntu oracular/main armhf gfortran-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu1 [1024 B] 566s Get:47 http://ftpmaster.internal/ubuntu oracular/main armhf gfortran armhf 4:13.2.0-7ubuntu1 [1166 B] 566s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf icu-devtools armhf 74.2-1ubuntu3 [201 kB] 566s Get:49 http://ftpmaster.internal/ubuntu oracular/main armhf javascript-common all 11+nmu1 [5936 B] 566s Get:50 http://ftpmaster.internal/ubuntu oracular/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 566s Get:51 http://ftpmaster.internal/ubuntu oracular/main armhf libaom3 armhf 3.8.2-2build1 [1681 kB] 566s Get:52 http://ftpmaster.internal/ubuntu oracular/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 566s Get:53 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 566s Get:54 http://ftpmaster.internal/ubuntu oracular/universe armhf libarpack2t64 armhf 3.9.1-1.1build2 [88.4 kB] 566s Get:55 http://ftpmaster.internal/ubuntu oracular/universe armhf libsuperlu6 armhf 6.0.1+dfsg1-1build1 [155 kB] 566s Get:56 http://ftpmaster.internal/ubuntu oracular/universe armhf libarmadillo12 armhf 1:12.8.2+dfsg-1 [102 kB] 566s Get:57 http://ftpmaster.internal/ubuntu oracular/main armhf libblas-dev armhf 3.12.0-3build1 [132 kB] 566s Get:58 http://ftpmaster.internal/ubuntu oracular/main armhf libsnappy1v5 armhf 1.2.1-1 [28.4 kB] 566s Get:59 http://ftpmaster.internal/ubuntu oracular/universe armhf libblosc1 armhf 1.21.5+ds-1build1 [23.7 kB] 566s Get:60 http://ftpmaster.internal/ubuntu oracular/main armhf libbz2-dev armhf 1.0.8-5.1 [30.5 kB] 566s Get:61 http://ftpmaster.internal/ubuntu oracular/main armhf libpixman-1-0 armhf 0.42.2-1build1 [193 kB] 566s Get:62 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb-render0 armhf 1.17.0-2 [15.3 kB] 566s Get:63 http://ftpmaster.internal/ubuntu oracular/main armhf libxcb-shm0 armhf 1.17.0-2 [5774 B] 566s Get:64 http://ftpmaster.internal/ubuntu oracular/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 566s Get:65 http://ftpmaster.internal/ubuntu oracular/main armhf libcairo2 armhf 1.18.0-3build1 [482 kB] 566s Get:66 http://ftpmaster.internal/ubuntu oracular/universe armhf libcfitsio10t64 armhf 4.3.1-1.1build2 [504 kB] 566s Get:67 http://ftpmaster.internal/ubuntu oracular/main armhf libdatrie1 armhf 0.2.13-3build1 [15.7 kB] 566s Get:68 http://ftpmaster.internal/ubuntu oracular/main armhf libde265-0 armhf 1.0.15-1build3 [158 kB] 566s Get:69 http://ftpmaster.internal/ubuntu oracular/main armhf libdeflate0 armhf 1.20-1 [38.3 kB] 566s Get:70 http://ftpmaster.internal/ubuntu oracular/main armhf libdeflate-dev armhf 1.20-1 [44.6 kB] 566s Get:71 http://ftpmaster.internal/ubuntu oracular/universe armhf libfyba0t64 armhf 4.1.1-11build1 [109 kB] 566s Get:72 http://ftpmaster.internal/ubuntu oracular/universe armhf libminizip1t64 armhf 1:1.3.dfsg-3.1ubuntu2 [19.9 kB] 566s Get:73 http://ftpmaster.internal/ubuntu oracular/universe armhf libfreexl1 armhf 2.0.0-1build2 [37.6 kB] 566s Get:74 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeos3.12.1t64 armhf 3.12.1-3build1 [867 kB] 566s Get:75 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeos-c1t64 armhf 3.12.1-3build1 [92.8 kB] 566s Get:76 http://ftpmaster.internal/ubuntu oracular/universe armhf proj-data all 9.4.0-1build2 [7885 kB] 566s Get:77 http://ftpmaster.internal/ubuntu oracular/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 566s Get:78 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] 566s Get:79 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 566s Get:80 http://ftpmaster.internal/ubuntu oracular/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB] 566s Get:81 http://ftpmaster.internal/ubuntu oracular/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB] 566s Get:82 http://ftpmaster.internal/ubuntu oracular/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB] 566s Get:83 http://ftpmaster.internal/ubuntu oracular/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu2 [178 kB] 566s Get:84 http://ftpmaster.internal/ubuntu oracular/universe armhf libproj25 armhf 9.4.0-1build2 [1281 kB] 566s Get:85 http://ftpmaster.internal/ubuntu oracular/universe armhf libgeotiff5 armhf 1.7.1-5build1 [52.1 kB] 566s Get:86 http://ftpmaster.internal/ubuntu oracular/main armhf libgif7 armhf 5.2.2-1ubuntu1 [32.6 kB] 566s Get:87 http://ftpmaster.internal/ubuntu oracular/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 566s Get:88 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf4-0-alt armhf 4.3.0-1 [253 kB] 566s Get:89 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-103-1t64 armhf 1.10.10+repack-3.1ubuntu4 [1337 kB] 566s Get:90 http://ftpmaster.internal/ubuntu oracular/main armhf libheif-plugin-aomdec armhf 1.17.6-1ubuntu4 [9862 B] 566s Get:91 http://ftpmaster.internal/ubuntu oracular/main armhf libheif-plugin-libde265 armhf 1.17.6-1ubuntu4 [10.3 kB] 566s Get:92 http://ftpmaster.internal/ubuntu oracular/main armhf libheif1 armhf 1.17.6-1ubuntu4 [267 kB] 566s Get:93 http://ftpmaster.internal/ubuntu oracular/universe armhf liburiparser1 armhf 0.9.7+dfsg-2build1 [29.9 kB] 566s Get:94 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmlbase1t64 armhf 1.3.0-12build1 [45.0 kB] 566s Get:95 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmldom1t64 armhf 1.3.0-12build1 [145 kB] 566s Get:96 http://ftpmaster.internal/ubuntu oracular/universe armhf libkmlengine1t64 armhf 1.3.0-12build1 [69.6 kB] 566s Get:97 http://ftpmaster.internal/ubuntu oracular/main armhf mysql-common all 5.8+1.1.0build1 [6746 B] 566s Get:98 http://ftpmaster.internal/ubuntu oracular/main armhf libmysqlclient21 armhf 8.0.37-1 [1265 kB] 567s Get:99 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-hl-100t64 armhf 1.10.10+repack-3.1ubuntu4 [54.8 kB] 567s Get:100 http://ftpmaster.internal/ubuntu oracular/universe armhf libnetcdf19t64 armhf 1:4.9.2-5ubuntu4 [422 kB] 567s Get:101 http://ftpmaster.internal/ubuntu oracular/main armhf libltdl7 armhf 2.4.7-7build1 [37.6 kB] 567s Get:102 http://ftpmaster.internal/ubuntu oracular/main armhf libodbc2 armhf 2.3.12-1build2 [144 kB] 567s Get:103 http://ftpmaster.internal/ubuntu oracular/main armhf unixodbc-common all 2.3.12-1build2 [8646 B] 567s Get:104 http://ftpmaster.internal/ubuntu oracular/main armhf libodbcinst2 armhf 2.3.12-1build2 [30.4 kB] 567s Get:105 http://ftpmaster.internal/ubuntu oracular/universe armhf libogdi4.1 armhf 4.1.1+ds-4 [185 kB] 567s Get:106 http://ftpmaster.internal/ubuntu oracular/main armhf libopenjp2-7 armhf 2.5.0-2build3 [160 kB] 567s Get:107 http://ftpmaster.internal/ubuntu oracular/main armhf liblcms2-2 armhf 2.14-2build1 [132 kB] 567s Get:108 http://ftpmaster.internal/ubuntu oracular/main armhf libpoppler134 armhf 24.02.0-1ubuntu9 [968 kB] 567s Get:109 http://ftpmaster.internal/ubuntu oracular/main armhf libpq5 armhf 16.2-1ubuntu4 [122 kB] 567s Get:110 http://ftpmaster.internal/ubuntu oracular/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 567s Get:111 http://ftpmaster.internal/ubuntu oracular/universe armhf librttopo1 armhf 1.1.0-3build2 [160 kB] 567s Get:112 http://ftpmaster.internal/ubuntu oracular/universe armhf libspatialite8t64 armhf 5.1.0-3build1 [2019 kB] 567s Get:113 http://ftpmaster.internal/ubuntu oracular/universe armhf libxerces-c3.2t64 armhf 3.2.4+debian-1.3 [817 kB] 567s Get:114 http://ftpmaster.internal/ubuntu oracular/universe armhf libgdal34t64 armhf 3.8.5+dfsg-1 [7869 kB] 568s Get:115 http://ftpmaster.internal/ubuntu oracular/main armhf libgraphite2-3 armhf 1.3.14-2build1 [64.6 kB] 568s Get:116 http://ftpmaster.internal/ubuntu oracular/main armhf libharfbuzz0b armhf 8.3.0-2build2 [446 kB] 568s Get:117 http://ftpmaster.internal/ubuntu oracular/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 568s Get:118 http://ftpmaster.internal/ubuntu oracular/main armhf libice6 armhf 2:1.0.10-1build3 [35.4 kB] 568s Get:119 http://ftpmaster.internal/ubuntu oracular/main armhf libicu-dev armhf 74.2-1ubuntu3 [11.6 MB] 568s Get:120 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg-turbo8-dev armhf 2.1.5-2ubuntu2 [262 kB] 568s Get:121 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg8-dev armhf 8c-2ubuntu11 [1484 B] 568s Get:122 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg-dev armhf 8c-2ubuntu11 [1482 B] 568s Get:123 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 568s Get:124 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 568s Get:125 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 568s Get:126 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-d3 all 3.5.17-4 [132 kB] 568s Get:127 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-es5-shim all 4.6.7-2 [39.8 kB] 568s Get:128 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 568s Get:129 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 568s Get:130 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 568s Get:131 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 568s Get:132 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 568s Get:133 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 568s Get:134 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 568s Get:135 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 568s Get:136 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 568s Get:137 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack-dev armhf 3.12.0-3build1 [2177 kB] 568s Get:138 http://ftpmaster.internal/ubuntu oracular/main armhf liblua5.4-0 armhf 5.4.6-3build2 [133 kB] 568s Get:139 http://ftpmaster.internal/ubuntu oracular/main armhf libncurses-dev armhf 6.4+20240113-1ubuntu2 [501 kB] 568s Get:140 http://ftpmaster.internal/ubuntu oracular/main armhf libthai-data all 0.1.29-2build1 [158 kB] 568s Get:141 http://ftpmaster.internal/ubuntu oracular/main armhf libthai0 armhf 0.1.29-2build1 [15.2 kB] 568s Get:142 http://ftpmaster.internal/ubuntu oracular/main armhf libpango-1.0-0 armhf 1.52.2+ds-1 [209 kB] 568s Get:143 http://ftpmaster.internal/ubuntu oracular/main armhf libpangoft2-1.0-0 armhf 1.52.2+ds-1 [36.4 kB] 568s Get:144 http://ftpmaster.internal/ubuntu oracular/main armhf libpangocairo-1.0-0 armhf 1.52.2+ds-1 [24.9 kB] 568s Get:145 http://ftpmaster.internal/ubuntu oracular/main armhf libpaper1 armhf 1.1.29build1 [12.6 kB] 568s Get:146 http://ftpmaster.internal/ubuntu oracular/main armhf libpaper-utils armhf 1.1.29build1 [8184 B] 568s Get:147 http://ftpmaster.internal/ubuntu oracular/main armhf libpcre2-16-0 armhf 10.42-4ubuntu2 [180 kB] 568s Get:148 http://ftpmaster.internal/ubuntu oracular/main armhf libpcre2-32-0 armhf 10.42-4ubuntu2 [171 kB] 568s Get:149 http://ftpmaster.internal/ubuntu oracular/main armhf libpcre2-posix3 armhf 10.42-4ubuntu2 [6088 B] 568s Get:150 http://ftpmaster.internal/ubuntu oracular/main armhf libpcre2-dev armhf 10.42-4ubuntu2 [664 kB] 568s Get:151 http://ftpmaster.internal/ubuntu oracular/main armhf libpkgconf3 armhf 1.8.1-2build1 [26.3 kB] 568s Get:152 http://ftpmaster.internal/ubuntu oracular/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1ubuntu2 [880 kB] 568s Get:153 http://ftpmaster.internal/ubuntu oracular/main armhf libpng-dev armhf 1.6.43-5build1 [248 kB] 568s Get:154 http://ftpmaster.internal/ubuntu oracular/main armhf libreadline-dev armhf 8.2-4build1 [153 kB] 568s Get:155 http://ftpmaster.internal/ubuntu oracular/main armhf libsm6 armhf 2:1.2.3-1build3 [14.1 kB] 568s Get:156 http://ftpmaster.internal/ubuntu oracular/main armhf libtcl8.6 armhf 8.6.14+dfsg-1build1 [903 kB] 568s Get:157 http://ftpmaster.internal/ubuntu oracular/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 568s Get:158 http://ftpmaster.internal/ubuntu oracular/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 568s Get:159 http://ftpmaster.internal/ubuntu oracular/main armhf libtk8.6 armhf 8.6.14-1build1 [681 kB] 568s Get:160 http://ftpmaster.internal/ubuntu oracular/universe armhf libudunits2-data all 2.2.28-7build1 [19.4 kB] 568s Get:161 http://ftpmaster.internal/ubuntu oracular/universe armhf libudunits2-0 armhf 2.2.28-7build1 [47.1 kB] 568s Get:162 http://ftpmaster.internal/ubuntu oracular/main armhf libxt6t64 armhf 1:1.2.1-1.2build1 [145 kB] 568s Get:163 http://ftpmaster.internal/ubuntu oracular/main armhf zip armhf 3.0-13build1 [163 kB] 568s Get:164 http://ftpmaster.internal/ubuntu oracular/main armhf unzip armhf 6.0-28ubuntu4 [163 kB] 568s Get:165 http://ftpmaster.internal/ubuntu oracular/main armhf xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 568s Get:166 http://ftpmaster.internal/ubuntu oracular/universe armhf r-base-core armhf 4.4.0-2 [28.1 MB] 569s Get:167 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-littler armhf 0.3.20-1 [82.6 kB] 569s Get:168 http://ftpmaster.internal/ubuntu oracular/universe armhf littler all 0.3.20-1 [2486 B] 569s Get:169 http://ftpmaster.internal/ubuntu oracular/universe armhf node-bootstrap-sass all 3.4.3-2 [187 kB] 569s Get:170 http://ftpmaster.internal/ubuntu oracular/universe armhf node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 569s Get:171 http://ftpmaster.internal/ubuntu oracular/universe armhf node-normalize.css all 8.0.1-5 [10.8 kB] 569s Get:172 http://ftpmaster.internal/ubuntu oracular/universe armhf pandoc-data all 3.1.3-2build2 [78.3 kB] 569s Get:173 http://ftpmaster.internal/ubuntu oracular/universe armhf pandoc armhf 3.1.3+ds-3build1 [31.9 MB] 570s Get:174 http://ftpmaster.internal/ubuntu oracular/main armhf liblzma-dev armhf 5.6.1+really5.4.5-1 [165 kB] 570s Get:175 http://ftpmaster.internal/ubuntu oracular/main armhf pkgconf-bin armhf 1.8.1-2build1 [20.7 kB] 570s Get:176 http://ftpmaster.internal/ubuntu oracular/main armhf pkgconf armhf 1.8.1-2build1 [16.8 kB] 570s Get:177 http://ftpmaster.internal/ubuntu oracular/main armhf libtirpc-dev armhf 1.3.4+ds-1.3 [184 kB] 570s Get:178 http://ftpmaster.internal/ubuntu oracular/universe armhf r-base-dev all 4.4.0-2 [4340 B] 570s Get:179 http://ftpmaster.internal/ubuntu oracular/universe armhf pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 570s Get:180 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-abind all 1.4-5-2 [63.6 kB] 570s Get:181 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cli armhf 3.6.2-1 [1363 kB] 570s Get:182 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-generics all 0.1.3-1 [81.3 kB] 570s Get:183 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-glue armhf 1.7.0-1 [153 kB] 570s Get:184 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rlang armhf 1.1.3-1 [1658 kB] 570s Get:185 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 570s Get:186 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-magrittr armhf 2.0.3-1 [154 kB] 570s Get:187 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fansi armhf 1.0.5-1 [611 kB] 570s Get:188 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-utf8 armhf 1.2.4-1 [136 kB] 570s Get:189 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-vctrs armhf 0.6.5-1 [1310 kB] 570s Get:190 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 570s Get:191 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-r6 all 2.5.1-1 [99.0 kB] 570s Get:192 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 570s Get:193 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tibble armhf 3.2.1+dfsg-2 [415 kB] 570s Get:194 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-withr all 2.5.0-1 [225 kB] 570s Get:195 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tidyselect armhf 1.2.0+dfsg-1 [218 kB] 570s Get:196 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-dplyr armhf 1.1.4-1 [1510 kB] 570s Get:197 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-purrr armhf 1.0.2-1 [499 kB] 570s Get:198 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mass armhf 7.3-60.0.1-1 [1118 kB] 570s Get:199 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-class armhf 7.3-22-2build1 [87.0 kB] 570s Get:200 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-proxy armhf 0.4-27-1 [180 kB] 570s Get:201 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-e1071 armhf 1.7-14-1 [551 kB] 570s Get:202 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-kernsmooth armhf 2.23-24-1 [91.1 kB] 570s Get:203 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-classint armhf 0.4-10+dfsg-1 [105 kB] 570s Get:204 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-dbi all 1.2.2-1 [823 kB] 571s Get:205 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 571s Get:206 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcpp armhf 1.0.12-1 [1968 kB] 571s Get:207 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-wk armhf 0.9.1-1 [1781 kB] 571s Get:208 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-s2 armhf 1.1.6-1build2 [1895 kB] 571s Get:209 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-units armhf 0.8-5+dfsg-1 [270 kB] 571s Get:210 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sf armhf 1.0-16+dfsg-1 [3038 kB] 571s Get:211 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-areal all 0.1.8+dfsg-2 [1004 kB] 571s Get:212 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sys armhf 3.4.2-1 [43.7 kB] 571s Get:213 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-askpass armhf 1.2.0-1 [24.3 kB] 571s Get:214 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-base64enc armhf 0.1-3-3 [27.3 kB] 571s Get:215 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-bdsmatrix armhf 1.3-7-1 [298 kB] 571s Get:216 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-brio armhf 1.1.5-1 [37.9 kB] 571s Get:217 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fastmap armhf 1.1.1-1 [68.1 kB] 571s Get:218 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cachem armhf 1.0.8-1 [72.0 kB] 571s Get:219 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-digest armhf 0.6.35-1 [202 kB] 571s Get:220 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-htmltools armhf 0.5.8.1-1 [372 kB] 571s Get:221 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 571s Get:222 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-jsonlite armhf 1.8.8+dfsg-1 [438 kB] 571s Get:223 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-memoise all 2.0.1-1 [53.9 kB] 571s Get:224 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mime armhf 0.12-2 [35.5 kB] 571s Get:225 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fs armhf 1.6.3+dfsg-1build2 [226 kB] 571s Get:226 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rappdirs armhf 0.3.3-1 [47.4 kB] 571s Get:227 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sass armhf 0.4.9+dfsg-1 [926 kB] 571s Get:228 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 571s Get:229 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cairo armhf 1.6-2-1 [83.8 kB] 571s Get:230 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ps armhf 1.7.6-1 [310 kB] 571s Get:231 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-processx armhf 3.8.3-1 [334 kB] 571s Get:232 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-callr all 3.7.6-1 [458 kB] 571s Get:233 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cluster armhf 2.1.6-1build1 [548 kB] 571s Get:234 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-clue armhf 0.3-65-1 [957 kB] 571s Get:235 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-codetools all 0.2-20-1 [90.5 kB] 571s Get:236 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-collapse armhf 2.0.13-1 [3067 kB] 572s Get:237 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-colorspace armhf 2.1-0+dfsg-1 [1538 kB] 572s Get:238 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-commonmark armhf 1.9.1-1 [110 kB] 572s Get:239 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lazyeval armhf 0.2.2-1build1 [142 kB] 572s Get:240 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rex all 1.2.1-1 [129 kB] 572s Get:241 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-curl armhf 5.2.0+dfsg-1build2 [175 kB] 572s Get:242 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-openssl armhf 2.1.1+dfsg-2build2 [398 kB] 572s Get:243 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-httr all 1.4.7+dfsg-1 [459 kB] 572s Get:244 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-crayon all 1.5.2-1 [164 kB] 572s Get:245 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-yaml armhf 2.3.8-2 [100 kB] 572s Get:246 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-covr armhf 3.6.4+dfsg-1 [302 kB] 572s Get:247 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-cpp11 all 0.4.7-1 [266 kB] 572s Get:248 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-deldir armhf 2.0-4-1build1 [268 kB] 572s Get:249 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-desc all 1.4.3-1 [359 kB] 572s Get:250 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-diffobj armhf 0.3.5-1 [1115 kB] 572s Get:251 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-evaluate all 0.23-1 [90.2 kB] 572s Get:252 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-farver armhf 2.1.1-2 [1353 kB] 572s Get:253 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fnn armhf 1.1.4-1 [115 kB] 572s Get:254 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-fontawesome all 0.5.2-1 [1300 kB] 572s Get:255 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-formula all 1.2-5-1 [158 kB] 572s Get:256 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-globals all 0.16.3-1 [120 kB] 572s Get:257 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 572s Get:258 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-parallelly armhf 1.37.1-1build1 [364 kB] 572s Get:259 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-future all 1.33.1+dfsg-1 [634 kB] 572s Get:260 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] 572s Get:261 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 572s Get:262 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-isoband armhf 0.2.7-1 [1477 kB] 572s Get:263 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lattice armhf 0.22-6-1 [1363 kB] 572s Get:264 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-nlme armhf 3.1.164-1build1 [2248 kB] 572s Get:265 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-matrix armhf 1.6-5-1 [3762 kB] 572s Get:266 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mgcv armhf 1.9-1-1 [3205 kB] 572s Get:267 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-labeling all 0.4.3-1 [62.1 kB] 572s Get:268 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-munsell all 0.5.0-2build1 [208 kB] 572s Get:269 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 572s Get:270 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-viridislite all 0.4.2-2 [1088 kB] 572s Get:271 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-scales all 1.3.0-1 [603 kB] 572s Get:272 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 572s Get:273 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tweenr armhf 2.0.3-1 [403 kB] 572s Get:274 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-polyclip armhf 1.10-6-1 [107 kB] 572s Get:275 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-systemfonts armhf 1.0.5-1 [215 kB] 572s Get:276 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rcppeigen armhf 0.3.4.0.0-1build1 [1402 kB] 572s Get:277 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ggforce armhf 0.4.2-1 [1767 kB] 572s Get:278 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stringi armhf 1.8.3-1 [859 kB] 572s Get:279 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stringr all 1.5.1-1 [290 kB] 572s Get:280 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ggthemes all 5.1.0-1 [434 kB] 573s Get:281 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-goftest armhf 1.2-3-1 [58.6 kB] 573s Get:282 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-gridextra all 2.3-3build1 [1024 kB] 573s Get:283 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xfun armhf 0.44+dfsg-1 [517 kB] 573s Get:284 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-highr all 0.10+dfsg-2 [38.5 kB] 573s Get:285 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-later armhf 1.3.2+dfsg-1 [118 kB] 573s Get:286 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-promises armhf 1.3.0+dfsg-1 [285 kB] 573s Get:287 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-httpuv armhf 1.6.15+dfsg-1 [480 kB] 573s Get:288 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-intervals armhf 0.15.4-1 [754 kB] 573s Get:289 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 573s Get:290 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-knitr all 1.46+dfsg-1 [911 kB] 573s Get:291 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-zoo armhf 1.8-12-2 [984 kB] 573s Get:292 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lmtest armhf 0.9.40-1 [396 kB] 573s Get:293 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-lwgeom armhf 0.2-13-3build2 [365 kB] 573s Get:294 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-maps armhf 3.4.2-1 [2355 kB] 573s Get:295 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-mapdata armhf 2.3.1-1 [23.5 MB] 574s Get:296 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-misctools all 0.6-28-1 [99.9 kB] 574s Get:297 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sandwich all 3.1-0-1 [1484 kB] 574s Get:298 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-maxlik all 1.5-2-1 [1550 kB] 574s Get:299 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rnetcdf armhf 2.9-1-1build2 [231 kB] 574s Get:300 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tidyr armhf 1.3.1-1 [1152 kB] 574s Get:301 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ncmeta all 0.3.6-1 [360 kB] 574s Get:302 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-stars all 0.6-4-1 [4030 kB] 574s Get:303 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-ncdfgeom all 1.1.6+dfsg-1 [4124 kB] 574s Get:304 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pbapply all 1.7-2-1 [102 kB] 574s Get:305 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pcict armhf 0.5-4.4-1 [92.9 kB] 575s Get:306 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgbuild all 1.4.3-1 [209 kB] 575s Get:307 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rprojroot all 2.0.4-1 [124 kB] 575s Get:308 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-pkgload all 1.3.4-1 [207 kB] 575s Get:309 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rbibutils armhf 2.2.16-1 [677 kB] 575s Get:310 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rdpack all 2.6-1 [742 kB] 575s Get:311 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-plm all 2.6-4-1 [2161 kB] 575s Get:312 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-praise all 1.0.0-4build1 [20.3 kB] 575s Get:313 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-randomforest armhf 4.7-1.1-1 [210 kB] 575s Get:314 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sp armhf 1:2.1-2+dfsg-1 [1445 kB] 575s Get:315 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-terra armhf 1.7-65-1build2 [3556 kB] 575s Get:316 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-raster armhf 3.6-26-1 [3093 kB] 575s Get:317 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 575s Get:318 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tinytex all 0.49-1 [141 kB] 575s Get:319 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-modernizr all 3.13.0-0.1 [101 kB] 575s Get:320 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xtable all 1:1.8-4-2 [689 kB] 575s Get:321 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-sourcetools armhf 0.1.7-1-1 [45.7 kB] 575s Get:322 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 575s Get:323 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 575s Get:324 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 576s Get:325 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-survival armhf 3.5-8-1 [6104 kB] 576s Get:326 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-rpart armhf 4.1.23-1build1 [657 kB] 576s Get:327 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-xts armhf 0.13.2-1 [764 kB] 576s Get:328 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spacetime all 1.3-1-1 [2804 kB] 576s Get:329 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.utils armhf 3.0-4-1 [359 kB] 576s Get:330 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.data all 3.0-4-1 [4090 kB] 576s Get:331 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.geom armhf 3.2-9-1 [3924 kB] 576s Get:332 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.random armhf 3.2-3-1 [1152 kB] 576s Get:333 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-tensor all 1.5-4 [15.7 kB] 576s Get:334 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.sparse armhf 3.0-3-1 [213 kB] 576s Get:335 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.explore armhf 3.2-5-1 [3267 kB] 576s Get:336 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.model armhf 3.2-11-1 [3385 kB] 576s Get:337 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat.linnet armhf 3.1-5-1 [1465 kB] 576s Get:338 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-spatstat armhf 3.0-7-1 [3817 kB] 576s Get:339 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-waldo all 0.5.2-1build1 [120 kB] 576s Get:340 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-testthat armhf 3.2.1-1 [1666 kB] 576s Get:341 http://ftpmaster.internal/ubuntu oracular/universe armhf r-cran-viridis all 0.6.5-1 [2770 kB] 577s Preconfiguring packages ... 577s Fetched 353 MB in 16s (22.2 MB/s) 577s Selecting previously unselected package libc-dev-bin. 577s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58342 files and directories currently installed.) 577s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu8.1_armhf.deb ... 577s Unpacking libc-dev-bin (2.39-0ubuntu8.1) ... 577s Selecting previously unselected package linux-libc-dev:armhf. 577s Preparing to unpack .../001-linux-libc-dev_6.8.0-31.31_armhf.deb ... 577s Unpacking linux-libc-dev:armhf (6.8.0-31.31) ... 578s Selecting previously unselected package libcrypt-dev:armhf. 578s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4build1_armhf.deb ... 578s Unpacking libcrypt-dev:armhf (1:4.4.36-4build1) ... 578s Selecting previously unselected package rpcsvc-proto. 578s Preparing to unpack .../003-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 578s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 578s Selecting previously unselected package libc6-dev:armhf. 578s Preparing to unpack .../004-libc6-dev_2.39-0ubuntu8.1_armhf.deb ... 578s Unpacking libc6-dev:armhf (2.39-0ubuntu8.1) ... 578s Selecting previously unselected package gcc-13-base:armhf. 578s Preparing to unpack .../005-gcc-13-base_13.2.0-23ubuntu4_armhf.deb ... 578s Unpacking gcc-13-base:armhf (13.2.0-23ubuntu4) ... 578s Selecting previously unselected package libisl23:armhf. 578s Preparing to unpack .../006-libisl23_0.26-3build1_armhf.deb ... 578s Unpacking libisl23:armhf (0.26-3build1) ... 578s Selecting previously unselected package libmpc3:armhf. 578s Preparing to unpack .../007-libmpc3_1.3.1-1build1_armhf.deb ... 578s Unpacking libmpc3:armhf (1.3.1-1build1) ... 578s Selecting previously unselected package cpp-13-arm-linux-gnueabihf. 578s Preparing to unpack .../008-cpp-13-arm-linux-gnueabihf_13.2.0-23ubuntu4_armhf.deb ... 578s Unpacking cpp-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... 578s Selecting previously unselected package cpp-13. 578s Preparing to unpack .../009-cpp-13_13.2.0-23ubuntu4_armhf.deb ... 578s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 578s Selecting previously unselected package cpp-arm-linux-gnueabihf. 578s Preparing to unpack .../010-cpp-arm-linux-gnueabihf_4%3a13.2.0-7ubuntu1_armhf.deb ... 578s Unpacking cpp-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... 578s Selecting previously unselected package cpp. 578s Preparing to unpack .../011-cpp_4%3a13.2.0-7ubuntu1_armhf.deb ... 578s Unpacking cpp (4:13.2.0-7ubuntu1) ... 578s Selecting previously unselected package libcc1-0:armhf. 578s Preparing to unpack .../012-libcc1-0_14.1.0-1ubuntu1_armhf.deb ... 578s Unpacking libcc1-0:armhf (14.1.0-1ubuntu1) ... 578s Selecting previously unselected package libgomp1:armhf. 578s Preparing to unpack .../013-libgomp1_14.1.0-1ubuntu1_armhf.deb ... 578s Unpacking libgomp1:armhf (14.1.0-1ubuntu1) ... 578s Selecting previously unselected package libatomic1:armhf. 578s Preparing to unpack .../014-libatomic1_14.1.0-1ubuntu1_armhf.deb ... 578s Unpacking libatomic1:armhf (14.1.0-1ubuntu1) ... 578s Selecting previously unselected package libasan8:armhf. 578s Preparing to unpack .../015-libasan8_14.1.0-1ubuntu1_armhf.deb ... 578s Unpacking libasan8:armhf (14.1.0-1ubuntu1) ... 578s Selecting previously unselected package libubsan1:armhf. 578s Preparing to unpack .../016-libubsan1_14.1.0-1ubuntu1_armhf.deb ... 578s Unpacking libubsan1:armhf (14.1.0-1ubuntu1) ... 578s Selecting previously unselected package libgcc-13-dev:armhf. 578s Preparing to unpack .../017-libgcc-13-dev_13.2.0-23ubuntu4_armhf.deb ... 578s Unpacking libgcc-13-dev:armhf (13.2.0-23ubuntu4) ... 578s Selecting previously unselected package gcc-13-arm-linux-gnueabihf. 578s Preparing to unpack .../018-gcc-13-arm-linux-gnueabihf_13.2.0-23ubuntu4_armhf.deb ... 578s Unpacking gcc-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... 579s Selecting previously unselected package gcc-13. 579s Preparing to unpack .../019-gcc-13_13.2.0-23ubuntu4_armhf.deb ... 579s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 579s Selecting previously unselected package gcc-arm-linux-gnueabihf. 579s Preparing to unpack .../020-gcc-arm-linux-gnueabihf_4%3a13.2.0-7ubuntu1_armhf.deb ... 579s Unpacking gcc-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... 579s Selecting previously unselected package gcc. 579s Preparing to unpack .../021-gcc_4%3a13.2.0-7ubuntu1_armhf.deb ... 579s Unpacking gcc (4:13.2.0-7ubuntu1) ... 579s Selecting previously unselected package libstdc++-13-dev:armhf. 579s Preparing to unpack .../022-libstdc++-13-dev_13.2.0-23ubuntu4_armhf.deb ... 579s Unpacking libstdc++-13-dev:armhf (13.2.0-23ubuntu4) ... 579s Selecting previously unselected package g++-13-arm-linux-gnueabihf. 579s Preparing to unpack .../023-g++-13-arm-linux-gnueabihf_13.2.0-23ubuntu4_armhf.deb ... 579s Unpacking g++-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... 579s Selecting previously unselected package g++-13. 579s Preparing to unpack .../024-g++-13_13.2.0-23ubuntu4_armhf.deb ... 579s Unpacking g++-13 (13.2.0-23ubuntu4) ... 579s Selecting previously unselected package g++-arm-linux-gnueabihf. 579s Preparing to unpack .../025-g++-arm-linux-gnueabihf_4%3a13.2.0-7ubuntu1_armhf.deb ... 579s Unpacking g++-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... 579s Selecting previously unselected package g++. 579s Preparing to unpack .../026-g++_4%3a13.2.0-7ubuntu1_armhf.deb ... 579s Unpacking g++ (4:13.2.0-7ubuntu1) ... 579s Selecting previously unselected package build-essential. 579s Preparing to unpack .../027-build-essential_12.10ubuntu1_armhf.deb ... 579s Unpacking build-essential (12.10ubuntu1) ... 580s Selecting previously unselected package dctrl-tools. 580s Preparing to unpack .../028-dctrl-tools_2.24-3build3_armhf.deb ... 580s Unpacking dctrl-tools (2.24-3build3) ... 580s Selecting previously unselected package libfreetype6:armhf. 580s Preparing to unpack .../029-libfreetype6_2.13.2+dfsg-1build3_armhf.deb ... 580s Unpacking libfreetype6:armhf (2.13.2+dfsg-1build3) ... 580s Selecting previously unselected package fonts-dejavu-mono. 580s Preparing to unpack .../030-fonts-dejavu-mono_2.37-8_all.deb ... 580s Unpacking fonts-dejavu-mono (2.37-8) ... 580s Selecting previously unselected package fonts-dejavu-core. 580s Preparing to unpack .../031-fonts-dejavu-core_2.37-8_all.deb ... 580s Unpacking fonts-dejavu-core (2.37-8) ... 580s Selecting previously unselected package fontconfig-config. 580s Preparing to unpack .../032-fontconfig-config_2.15.0-1.1ubuntu2_armhf.deb ... 580s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 580s Selecting previously unselected package libfontconfig1:armhf. 580s Preparing to unpack .../033-libfontconfig1_2.15.0-1.1ubuntu2_armhf.deb ... 580s Unpacking libfontconfig1:armhf (2.15.0-1.1ubuntu2) ... 580s Selecting previously unselected package fontconfig. 580s Preparing to unpack .../034-fontconfig_2.15.0-1.1ubuntu2_armhf.deb ... 580s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 580s Selecting previously unselected package fonts-font-awesome. 580s Preparing to unpack .../035-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 580s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 580s Selecting previously unselected package fonts-glyphicons-halflings. 580s Preparing to unpack .../036-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 580s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 580s Selecting previously unselected package fonts-mathjax. 580s Preparing to unpack .../037-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 580s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 580s Selecting previously unselected package gdal-data. 580s Preparing to unpack .../038-gdal-data_3.8.5+dfsg-1_all.deb ... 580s Unpacking gdal-data (3.8.5+dfsg-1) ... 580s Selecting previously unselected package gdal-plugins:armhf. 580s Preparing to unpack .../039-gdal-plugins_3.8.5+dfsg-1_armhf.deb ... 580s Unpacking gdal-plugins:armhf (3.8.5+dfsg-1) ... 580s Selecting previously unselected package libgfortran5:armhf. 580s Preparing to unpack .../040-libgfortran5_14.1.0-1ubuntu1_armhf.deb ... 580s Unpacking libgfortran5:armhf (14.1.0-1ubuntu1) ... 580s Selecting previously unselected package libgfortran-13-dev:armhf. 580s Preparing to unpack .../041-libgfortran-13-dev_13.2.0-23ubuntu4_armhf.deb ... 580s Unpacking libgfortran-13-dev:armhf (13.2.0-23ubuntu4) ... 580s Selecting previously unselected package gfortran-13-arm-linux-gnueabihf. 580s Preparing to unpack .../042-gfortran-13-arm-linux-gnueabihf_13.2.0-23ubuntu4_armhf.deb ... 580s Unpacking gfortran-13-arm-linux-gnueabihf (13.2.0-23ubuntu4) ... 581s Selecting previously unselected package gfortran-13. 581s Preparing to unpack .../043-gfortran-13_13.2.0-23ubuntu4_armhf.deb ... 581s Unpacking gfortran-13 (13.2.0-23ubuntu4) ... 581s Selecting previously unselected package gfortran-arm-linux-gnueabihf. 581s Preparing to unpack .../044-gfortran-arm-linux-gnueabihf_4%3a13.2.0-7ubuntu1_armhf.deb ... 581s Unpacking gfortran-arm-linux-gnueabihf (4:13.2.0-7ubuntu1) ... 581s Selecting previously unselected package gfortran. 581s Preparing to unpack .../045-gfortran_4%3a13.2.0-7ubuntu1_armhf.deb ... 581s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 581s Selecting previously unselected package icu-devtools. 581s Preparing to unpack .../046-icu-devtools_74.2-1ubuntu3_armhf.deb ... 581s Unpacking icu-devtools (74.2-1ubuntu3) ... 581s Selecting previously unselected package javascript-common. 581s Preparing to unpack .../047-javascript-common_11+nmu1_all.deb ... 581s Unpacking javascript-common (11+nmu1) ... 581s Selecting previously unselected package libaec0:armhf. 581s Preparing to unpack .../048-libaec0_1.1.3-1_armhf.deb ... 581s Unpacking libaec0:armhf (1.1.3-1) ... 581s Selecting previously unselected package libaom3:armhf. 581s Preparing to unpack .../049-libaom3_3.8.2-2build1_armhf.deb ... 581s Unpacking libaom3:armhf (3.8.2-2build1) ... 581s Selecting previously unselected package libblas3:armhf. 581s Preparing to unpack .../050-libblas3_3.12.0-3build1_armhf.deb ... 581s Unpacking libblas3:armhf (3.12.0-3build1) ... 581s Selecting previously unselected package liblapack3:armhf. 581s Preparing to unpack .../051-liblapack3_3.12.0-3build1_armhf.deb ... 581s Unpacking liblapack3:armhf (3.12.0-3build1) ... 581s Selecting previously unselected package libarpack2t64:armhf. 581s Preparing to unpack .../052-libarpack2t64_3.9.1-1.1build2_armhf.deb ... 581s Unpacking libarpack2t64:armhf (3.9.1-1.1build2) ... 581s Selecting previously unselected package libsuperlu6:armhf. 581s Preparing to unpack .../053-libsuperlu6_6.0.1+dfsg1-1build1_armhf.deb ... 581s Unpacking libsuperlu6:armhf (6.0.1+dfsg1-1build1) ... 581s Selecting previously unselected package libarmadillo12. 581s Preparing to unpack .../054-libarmadillo12_1%3a12.8.2+dfsg-1_armhf.deb ... 581s Unpacking libarmadillo12 (1:12.8.2+dfsg-1) ... 581s Selecting previously unselected package libblas-dev:armhf. 581s Preparing to unpack .../055-libblas-dev_3.12.0-3build1_armhf.deb ... 581s Unpacking libblas-dev:armhf (3.12.0-3build1) ... 581s Selecting previously unselected package libsnappy1v5:armhf. 581s Preparing to unpack .../056-libsnappy1v5_1.2.1-1_armhf.deb ... 581s Unpacking libsnappy1v5:armhf (1.2.1-1) ... 581s Selecting previously unselected package libblosc1:armhf. 581s Preparing to unpack .../057-libblosc1_1.21.5+ds-1build1_armhf.deb ... 581s Unpacking libblosc1:armhf (1.21.5+ds-1build1) ... 581s Selecting previously unselected package libbz2-dev:armhf. 581s Preparing to unpack .../058-libbz2-dev_1.0.8-5.1_armhf.deb ... 581s Unpacking libbz2-dev:armhf (1.0.8-5.1) ... 581s Selecting previously unselected package libpixman-1-0:armhf. 581s Preparing to unpack .../059-libpixman-1-0_0.42.2-1build1_armhf.deb ... 581s Unpacking libpixman-1-0:armhf (0.42.2-1build1) ... 581s Selecting previously unselected package libxcb-render0:armhf. 581s Preparing to unpack .../060-libxcb-render0_1.17.0-2_armhf.deb ... 581s Unpacking libxcb-render0:armhf (1.17.0-2) ... 581s Selecting previously unselected package libxcb-shm0:armhf. 581s Preparing to unpack .../061-libxcb-shm0_1.17.0-2_armhf.deb ... 581s Unpacking libxcb-shm0:armhf (1.17.0-2) ... 581s Selecting previously unselected package libxrender1:armhf. 581s Preparing to unpack .../062-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 581s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 581s Selecting previously unselected package libcairo2:armhf. 581s Preparing to unpack .../063-libcairo2_1.18.0-3build1_armhf.deb ... 581s Unpacking libcairo2:armhf (1.18.0-3build1) ... 581s Selecting previously unselected package libcfitsio10t64:armhf. 581s Preparing to unpack .../064-libcfitsio10t64_4.3.1-1.1build2_armhf.deb ... 581s Unpacking libcfitsio10t64:armhf (4.3.1-1.1build2) ... 581s Selecting previously unselected package libdatrie1:armhf. 581s Preparing to unpack .../065-libdatrie1_0.2.13-3build1_armhf.deb ... 581s Unpacking libdatrie1:armhf (0.2.13-3build1) ... 581s Selecting previously unselected package libde265-0:armhf. 581s Preparing to unpack .../066-libde265-0_1.0.15-1build3_armhf.deb ... 581s Unpacking libde265-0:armhf (1.0.15-1build3) ... 581s Selecting previously unselected package libdeflate0:armhf. 581s Preparing to unpack .../067-libdeflate0_1.20-1_armhf.deb ... 581s Unpacking libdeflate0:armhf (1.20-1) ... 581s Selecting previously unselected package libdeflate-dev:armhf. 581s Preparing to unpack .../068-libdeflate-dev_1.20-1_armhf.deb ... 581s Unpacking libdeflate-dev:armhf (1.20-1) ... 581s Selecting previously unselected package libfyba0t64:armhf. 581s Preparing to unpack .../069-libfyba0t64_4.1.1-11build1_armhf.deb ... 581s Unpacking libfyba0t64:armhf (4.1.1-11build1) ... 581s Selecting previously unselected package libminizip1t64:armhf. 582s Preparing to unpack .../070-libminizip1t64_1%3a1.3.dfsg-3.1ubuntu2_armhf.deb ... 582s Unpacking libminizip1t64:armhf (1:1.3.dfsg-3.1ubuntu2) ... 582s Selecting previously unselected package libfreexl1:armhf. 582s Preparing to unpack .../071-libfreexl1_2.0.0-1build2_armhf.deb ... 582s Unpacking libfreexl1:armhf (2.0.0-1build2) ... 582s Selecting previously unselected package libgeos3.12.1t64:armhf. 582s Preparing to unpack .../072-libgeos3.12.1t64_3.12.1-3build1_armhf.deb ... 582s Unpacking libgeos3.12.1t64:armhf (3.12.1-3build1) ... 582s Selecting previously unselected package libgeos-c1t64:armhf. 582s Preparing to unpack .../073-libgeos-c1t64_3.12.1-3build1_armhf.deb ... 582s Unpacking libgeos-c1t64:armhf (3.12.1-3build1) ... 582s Selecting previously unselected package proj-data. 582s Preparing to unpack .../074-proj-data_9.4.0-1build2_all.deb ... 582s Unpacking proj-data (9.4.0-1build2) ... 582s Selecting previously unselected package libjbig0:armhf. 582s Preparing to unpack .../075-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 582s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 582s Selecting previously unselected package libjpeg-turbo8:armhf. 582s Preparing to unpack .../076-libjpeg-turbo8_2.1.5-2ubuntu2_armhf.deb ... 582s Unpacking libjpeg-turbo8:armhf (2.1.5-2ubuntu2) ... 582s Selecting previously unselected package libjpeg8:armhf. 582s Preparing to unpack .../077-libjpeg8_8c-2ubuntu11_armhf.deb ... 582s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 582s Selecting previously unselected package liblerc4:armhf. 582s Preparing to unpack .../078-liblerc4_4.0.0+ds-4ubuntu2_armhf.deb ... 582s Unpacking liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 582s Selecting previously unselected package libsharpyuv0:armhf. 582s Preparing to unpack .../079-libsharpyuv0_1.4.0-0.1_armhf.deb ... 582s Unpacking libsharpyuv0:armhf (1.4.0-0.1) ... 582s Selecting previously unselected package libwebp7:armhf. 582s Preparing to unpack .../080-libwebp7_1.4.0-0.1_armhf.deb ... 582s Unpacking libwebp7:armhf (1.4.0-0.1) ... 582s Selecting previously unselected package libtiff6:armhf. 582s Preparing to unpack .../081-libtiff6_4.5.1+git230720-4ubuntu2_armhf.deb ... 582s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu2) ... 582s Selecting previously unselected package libproj25:armhf. 582s Preparing to unpack .../082-libproj25_9.4.0-1build2_armhf.deb ... 582s Unpacking libproj25:armhf (9.4.0-1build2) ... 582s Selecting previously unselected package libgeotiff5:armhf. 582s Preparing to unpack .../083-libgeotiff5_1.7.1-5build1_armhf.deb ... 582s Unpacking libgeotiff5:armhf (1.7.1-5build1) ... 582s Selecting previously unselected package libgif7:armhf. 582s Preparing to unpack .../084-libgif7_5.2.2-1ubuntu1_armhf.deb ... 582s Unpacking libgif7:armhf (5.2.2-1ubuntu1) ... 582s Selecting previously unselected package libsz2:armhf. 582s Preparing to unpack .../085-libsz2_1.1.3-1_armhf.deb ... 582s Unpacking libsz2:armhf (1.1.3-1) ... 582s Selecting previously unselected package libhdf4-0-alt:armhf. 582s Preparing to unpack .../086-libhdf4-0-alt_4.3.0-1_armhf.deb ... 582s Unpacking libhdf4-0-alt:armhf (4.3.0-1) ... 582s Selecting previously unselected package libhdf5-103-1t64:armhf. 582s Preparing to unpack .../087-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 582s Unpacking libhdf5-103-1t64:armhf (1.10.10+repack-3.1ubuntu4) ... 582s Selecting previously unselected package libheif-plugin-aomdec:armhf. 582s Preparing to unpack .../088-libheif-plugin-aomdec_1.17.6-1ubuntu4_armhf.deb ... 582s Unpacking libheif-plugin-aomdec:armhf (1.17.6-1ubuntu4) ... 582s Selecting previously unselected package libheif-plugin-libde265:armhf. 582s Preparing to unpack .../089-libheif-plugin-libde265_1.17.6-1ubuntu4_armhf.deb ... 582s Unpacking libheif-plugin-libde265:armhf (1.17.6-1ubuntu4) ... 582s Selecting previously unselected package libheif1:armhf. 582s Preparing to unpack .../090-libheif1_1.17.6-1ubuntu4_armhf.deb ... 582s Unpacking libheif1:armhf (1.17.6-1ubuntu4) ... 582s Selecting previously unselected package liburiparser1:armhf. 582s Preparing to unpack .../091-liburiparser1_0.9.7+dfsg-2build1_armhf.deb ... 582s Unpacking liburiparser1:armhf (0.9.7+dfsg-2build1) ... 582s Selecting previously unselected package libkmlbase1t64:armhf. 582s Preparing to unpack .../092-libkmlbase1t64_1.3.0-12build1_armhf.deb ... 582s Unpacking libkmlbase1t64:armhf (1.3.0-12build1) ... 582s Selecting previously unselected package libkmldom1t64:armhf. 582s Preparing to unpack .../093-libkmldom1t64_1.3.0-12build1_armhf.deb ... 582s Unpacking libkmldom1t64:armhf (1.3.0-12build1) ... 582s Selecting previously unselected package libkmlengine1t64:armhf. 582s Preparing to unpack .../094-libkmlengine1t64_1.3.0-12build1_armhf.deb ... 582s Unpacking libkmlengine1t64:armhf (1.3.0-12build1) ... 582s Selecting previously unselected package mysql-common. 582s Preparing to unpack .../095-mysql-common_5.8+1.1.0build1_all.deb ... 582s Unpacking mysql-common (5.8+1.1.0build1) ... 582s Selecting previously unselected package libmysqlclient21:armhf. 582s Preparing to unpack .../096-libmysqlclient21_8.0.37-1_armhf.deb ... 582s Unpacking libmysqlclient21:armhf (8.0.37-1) ... 583s Selecting previously unselected package libhdf5-hl-100t64:armhf. 583s Preparing to unpack .../097-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 583s Unpacking libhdf5-hl-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... 583s Selecting previously unselected package libnetcdf19t64:armhf. 583s Preparing to unpack .../098-libnetcdf19t64_1%3a4.9.2-5ubuntu4_armhf.deb ... 583s Unpacking libnetcdf19t64:armhf (1:4.9.2-5ubuntu4) ... 583s Selecting previously unselected package libltdl7:armhf. 583s Preparing to unpack .../099-libltdl7_2.4.7-7build1_armhf.deb ... 583s Unpacking libltdl7:armhf (2.4.7-7build1) ... 583s Selecting previously unselected package libodbc2:armhf. 583s Preparing to unpack .../100-libodbc2_2.3.12-1build2_armhf.deb ... 583s Unpacking libodbc2:armhf (2.3.12-1build2) ... 583s Selecting previously unselected package unixodbc-common. 583s Preparing to unpack .../101-unixodbc-common_2.3.12-1build2_all.deb ... 583s Unpacking unixodbc-common (2.3.12-1build2) ... 583s Selecting previously unselected package libodbcinst2:armhf. 583s Preparing to unpack .../102-libodbcinst2_2.3.12-1build2_armhf.deb ... 583s Unpacking libodbcinst2:armhf (2.3.12-1build2) ... 583s Selecting previously unselected package libogdi4.1:armhf. 583s Preparing to unpack .../103-libogdi4.1_4.1.1+ds-4_armhf.deb ... 583s Unpacking libogdi4.1:armhf (4.1.1+ds-4) ... 583s Selecting previously unselected package libopenjp2-7:armhf. 583s Preparing to unpack .../104-libopenjp2-7_2.5.0-2build3_armhf.deb ... 583s Unpacking libopenjp2-7:armhf (2.5.0-2build3) ... 583s Selecting previously unselected package liblcms2-2:armhf. 583s Preparing to unpack .../105-liblcms2-2_2.14-2build1_armhf.deb ... 583s Unpacking liblcms2-2:armhf (2.14-2build1) ... 583s Selecting previously unselected package libpoppler134:armhf. 583s Preparing to unpack .../106-libpoppler134_24.02.0-1ubuntu9_armhf.deb ... 583s Unpacking libpoppler134:armhf (24.02.0-1ubuntu9) ... 583s Selecting previously unselected package libpq5:armhf. 583s Preparing to unpack .../107-libpq5_16.2-1ubuntu4_armhf.deb ... 583s Unpacking libpq5:armhf (16.2-1ubuntu4) ... 583s Selecting previously unselected package libqhull-r8.0:armhf. 583s Preparing to unpack .../108-libqhull-r8.0_2020.2-6build1_armhf.deb ... 583s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 583s Selecting previously unselected package librttopo1:armhf. 583s Preparing to unpack .../109-librttopo1_1.1.0-3build2_armhf.deb ... 583s Unpacking librttopo1:armhf (1.1.0-3build2) ... 583s Selecting previously unselected package libspatialite8t64:armhf. 583s Preparing to unpack .../110-libspatialite8t64_5.1.0-3build1_armhf.deb ... 583s Unpacking libspatialite8t64:armhf (5.1.0-3build1) ... 583s Selecting previously unselected package libxerces-c3.2t64:armhf. 583s Preparing to unpack .../111-libxerces-c3.2t64_3.2.4+debian-1.3_armhf.deb ... 583s Unpacking libxerces-c3.2t64:armhf (3.2.4+debian-1.3) ... 583s Selecting previously unselected package libgdal34t64:armhf. 583s Preparing to unpack .../112-libgdal34t64_3.8.5+dfsg-1_armhf.deb ... 583s Unpacking libgdal34t64:armhf (3.8.5+dfsg-1) ... 583s Selecting previously unselected package libgraphite2-3:armhf. 583s Preparing to unpack .../113-libgraphite2-3_1.3.14-2build1_armhf.deb ... 583s Unpacking libgraphite2-3:armhf (1.3.14-2build1) ... 583s Selecting previously unselected package libharfbuzz0b:armhf. 583s Preparing to unpack .../114-libharfbuzz0b_8.3.0-2build2_armhf.deb ... 583s Unpacking libharfbuzz0b:armhf (8.3.0-2build2) ... 583s Selecting previously unselected package x11-common. 583s Preparing to unpack .../115-x11-common_1%3a7.7+23ubuntu3_all.deb ... 583s Unpacking x11-common (1:7.7+23ubuntu3) ... 583s Selecting previously unselected package libice6:armhf. 583s Preparing to unpack .../116-libice6_2%3a1.0.10-1build3_armhf.deb ... 583s Unpacking libice6:armhf (2:1.0.10-1build3) ... 583s Selecting previously unselected package libicu-dev:armhf. 583s Preparing to unpack .../117-libicu-dev_74.2-1ubuntu3_armhf.deb ... 583s Unpacking libicu-dev:armhf (74.2-1ubuntu3) ... 584s Selecting previously unselected package libjpeg-turbo8-dev:armhf. 584s Preparing to unpack .../118-libjpeg-turbo8-dev_2.1.5-2ubuntu2_armhf.deb ... 584s Unpacking libjpeg-turbo8-dev:armhf (2.1.5-2ubuntu2) ... 584s Selecting previously unselected package libjpeg8-dev:armhf. 584s Preparing to unpack .../119-libjpeg8-dev_8c-2ubuntu11_armhf.deb ... 584s Unpacking libjpeg8-dev:armhf (8c-2ubuntu11) ... 584s Selecting previously unselected package libjpeg-dev:armhf. 584s Preparing to unpack .../120-libjpeg-dev_8c-2ubuntu11_armhf.deb ... 584s Unpacking libjpeg-dev:armhf (8c-2ubuntu11) ... 584s Selecting previously unselected package libjs-bootstrap. 584s Preparing to unpack .../121-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 584s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 584s Selecting previously unselected package libjs-popper.js. 584s Preparing to unpack .../122-libjs-popper.js_1.16.1+ds-6_all.deb ... 584s Unpacking libjs-popper.js (1.16.1+ds-6) ... 584s Selecting previously unselected package libjs-bootstrap4. 584s Preparing to unpack .../123-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 584s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 584s Selecting previously unselected package libjs-d3. 584s Preparing to unpack .../124-libjs-d3_3.5.17-4_all.deb ... 584s Unpacking libjs-d3 (3.5.17-4) ... 584s Selecting previously unselected package libjs-es5-shim. 584s Preparing to unpack .../125-libjs-es5-shim_4.6.7-2_all.deb ... 584s Unpacking libjs-es5-shim (4.6.7-2) ... 584s Selecting previously unselected package libjs-highlight.js. 584s Preparing to unpack .../126-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 584s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 584s Selecting previously unselected package libjs-jquery. 584s Preparing to unpack .../127-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 584s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 584s Selecting previously unselected package libjs-jquery-datatables. 584s Preparing to unpack .../128-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 584s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 584s Selecting previously unselected package libjs-sifter.js. 584s Preparing to unpack .../129-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 584s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 584s Selecting previously unselected package libjs-microplugin.js. 584s Preparing to unpack .../130-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 584s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 584s Selecting previously unselected package libjs-jquery-selectize.js. 584s Preparing to unpack .../131-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 584s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 584s Selecting previously unselected package libjs-jquery-ui. 584s Preparing to unpack .../132-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 584s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 584s Selecting previously unselected package libjs-json. 584s Preparing to unpack .../133-libjs-json_0~20221030+~1.0.8-1_all.deb ... 584s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 584s Selecting previously unselected package libjs-prettify. 584s Preparing to unpack .../134-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 584s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 584s Selecting previously unselected package liblapack-dev:armhf. 584s Preparing to unpack .../135-liblapack-dev_3.12.0-3build1_armhf.deb ... 584s Unpacking liblapack-dev:armhf (3.12.0-3build1) ... 585s Selecting previously unselected package liblua5.4-0:armhf. 585s Preparing to unpack .../136-liblua5.4-0_5.4.6-3build2_armhf.deb ... 585s Unpacking liblua5.4-0:armhf (5.4.6-3build2) ... 585s Selecting previously unselected package libncurses-dev:armhf. 585s Preparing to unpack .../137-libncurses-dev_6.4+20240113-1ubuntu2_armhf.deb ... 585s Unpacking libncurses-dev:armhf (6.4+20240113-1ubuntu2) ... 585s Selecting previously unselected package libthai-data. 585s Preparing to unpack .../138-libthai-data_0.1.29-2build1_all.deb ... 585s Unpacking libthai-data (0.1.29-2build1) ... 585s Selecting previously unselected package libthai0:armhf. 585s Preparing to unpack .../139-libthai0_0.1.29-2build1_armhf.deb ... 585s Unpacking libthai0:armhf (0.1.29-2build1) ... 585s Selecting previously unselected package libpango-1.0-0:armhf. 585s Preparing to unpack .../140-libpango-1.0-0_1.52.2+ds-1_armhf.deb ... 585s Unpacking libpango-1.0-0:armhf (1.52.2+ds-1) ... 585s Selecting previously unselected package libpangoft2-1.0-0:armhf. 585s Preparing to unpack .../141-libpangoft2-1.0-0_1.52.2+ds-1_armhf.deb ... 585s Unpacking libpangoft2-1.0-0:armhf (1.52.2+ds-1) ... 585s Selecting previously unselected package libpangocairo-1.0-0:armhf. 585s Preparing to unpack .../142-libpangocairo-1.0-0_1.52.2+ds-1_armhf.deb ... 585s Unpacking libpangocairo-1.0-0:armhf (1.52.2+ds-1) ... 585s Selecting previously unselected package libpaper1:armhf. 585s Preparing to unpack .../143-libpaper1_1.1.29build1_armhf.deb ... 585s Unpacking libpaper1:armhf (1.1.29build1) ... 585s Selecting previously unselected package libpaper-utils. 585s Preparing to unpack .../144-libpaper-utils_1.1.29build1_armhf.deb ... 585s Unpacking libpaper-utils (1.1.29build1) ... 585s Selecting previously unselected package libpcre2-16-0:armhf. 585s Preparing to unpack .../145-libpcre2-16-0_10.42-4ubuntu2_armhf.deb ... 585s Unpacking libpcre2-16-0:armhf (10.42-4ubuntu2) ... 585s Selecting previously unselected package libpcre2-32-0:armhf. 585s Preparing to unpack .../146-libpcre2-32-0_10.42-4ubuntu2_armhf.deb ... 585s Unpacking libpcre2-32-0:armhf (10.42-4ubuntu2) ... 585s Selecting previously unselected package libpcre2-posix3:armhf. 585s Preparing to unpack .../147-libpcre2-posix3_10.42-4ubuntu2_armhf.deb ... 585s Unpacking libpcre2-posix3:armhf (10.42-4ubuntu2) ... 585s Selecting previously unselected package libpcre2-dev:armhf. 585s Preparing to unpack .../148-libpcre2-dev_10.42-4ubuntu2_armhf.deb ... 585s Unpacking libpcre2-dev:armhf (10.42-4ubuntu2) ... 585s Selecting previously unselected package libpkgconf3:armhf. 585s Preparing to unpack .../149-libpkgconf3_1.8.1-2build1_armhf.deb ... 585s Unpacking libpkgconf3:armhf (1.8.1-2build1) ... 585s Selecting previously unselected package zlib1g-dev:armhf. 585s Preparing to unpack .../150-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_armhf.deb ... 585s Unpacking zlib1g-dev:armhf (1:1.3.dfsg-3.1ubuntu2) ... 585s Selecting previously unselected package libpng-dev:armhf. 585s Preparing to unpack .../151-libpng-dev_1.6.43-5build1_armhf.deb ... 585s Unpacking libpng-dev:armhf (1.6.43-5build1) ... 585s Selecting previously unselected package libreadline-dev:armhf. 585s Preparing to unpack .../152-libreadline-dev_8.2-4build1_armhf.deb ... 585s Unpacking libreadline-dev:armhf (8.2-4build1) ... 585s Selecting previously unselected package libsm6:armhf. 585s Preparing to unpack .../153-libsm6_2%3a1.2.3-1build3_armhf.deb ... 585s Unpacking libsm6:armhf (2:1.2.3-1build3) ... 585s Selecting previously unselected package libtcl8.6:armhf. 585s Preparing to unpack .../154-libtcl8.6_8.6.14+dfsg-1build1_armhf.deb ... 585s Unpacking libtcl8.6:armhf (8.6.14+dfsg-1build1) ... 585s Selecting previously unselected package libxft2:armhf. 585s Preparing to unpack .../155-libxft2_2.3.6-1build1_armhf.deb ... 585s Unpacking libxft2:armhf (2.3.6-1build1) ... 585s Selecting previously unselected package libxss1:armhf. 585s Preparing to unpack .../156-libxss1_1%3a1.2.3-1build3_armhf.deb ... 585s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 585s Selecting previously unselected package libtk8.6:armhf. 585s Preparing to unpack .../157-libtk8.6_8.6.14-1build1_armhf.deb ... 585s Unpacking libtk8.6:armhf (8.6.14-1build1) ... 585s Selecting previously unselected package libudunits2-data. 585s Preparing to unpack .../158-libudunits2-data_2.2.28-7build1_all.deb ... 585s Unpacking libudunits2-data (2.2.28-7build1) ... 586s Selecting previously unselected package libudunits2-0. 586s Preparing to unpack .../159-libudunits2-0_2.2.28-7build1_armhf.deb ... 586s Unpacking libudunits2-0 (2.2.28-7build1) ... 586s Selecting previously unselected package libxt6t64:armhf. 586s Preparing to unpack .../160-libxt6t64_1%3a1.2.1-1.2build1_armhf.deb ... 586s Unpacking libxt6t64:armhf (1:1.2.1-1.2build1) ... 586s Selecting previously unselected package zip. 586s Preparing to unpack .../161-zip_3.0-13build1_armhf.deb ... 586s Unpacking zip (3.0-13build1) ... 586s Selecting previously unselected package unzip. 586s Preparing to unpack .../162-unzip_6.0-28ubuntu4_armhf.deb ... 586s Unpacking unzip (6.0-28ubuntu4) ... 586s Selecting previously unselected package xdg-utils. 586s Preparing to unpack .../163-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 586s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 586s Selecting previously unselected package r-base-core. 586s Preparing to unpack .../164-r-base-core_4.4.0-2_armhf.deb ... 586s Unpacking r-base-core (4.4.0-2) ... 586s Selecting previously unselected package r-cran-littler. 586s Preparing to unpack .../165-r-cran-littler_0.3.20-1_armhf.deb ... 586s Unpacking r-cran-littler (0.3.20-1) ... 586s Selecting previously unselected package littler. 586s Preparing to unpack .../166-littler_0.3.20-1_all.deb ... 586s Unpacking littler (0.3.20-1) ... 586s Selecting previously unselected package node-bootstrap-sass. 586s Preparing to unpack .../167-node-bootstrap-sass_3.4.3-2_all.deb ... 586s Unpacking node-bootstrap-sass (3.4.3-2) ... 586s Selecting previously unselected package node-html5shiv. 586s Preparing to unpack .../168-node-html5shiv_3.7.3+dfsg-5_all.deb ... 586s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 586s Selecting previously unselected package node-normalize.css. 586s Preparing to unpack .../169-node-normalize.css_8.0.1-5_all.deb ... 586s Unpacking node-normalize.css (8.0.1-5) ... 587s Selecting previously unselected package pandoc-data. 587s Preparing to unpack .../170-pandoc-data_3.1.3-2build2_all.deb ... 587s Unpacking pandoc-data (3.1.3-2build2) ... 587s Selecting previously unselected package pandoc. 587s Preparing to unpack .../171-pandoc_3.1.3+ds-3build1_armhf.deb ... 587s Unpacking pandoc (3.1.3+ds-3build1) ... 588s Selecting previously unselected package liblzma-dev:armhf. 588s Preparing to unpack .../172-liblzma-dev_5.6.1+really5.4.5-1_armhf.deb ... 588s Unpacking liblzma-dev:armhf (5.6.1+really5.4.5-1) ... 588s Selecting previously unselected package pkgconf-bin. 588s Preparing to unpack .../173-pkgconf-bin_1.8.1-2build1_armhf.deb ... 588s Unpacking pkgconf-bin (1.8.1-2build1) ... 588s Selecting previously unselected package pkgconf:armhf. 588s Preparing to unpack .../174-pkgconf_1.8.1-2build1_armhf.deb ... 588s Unpacking pkgconf:armhf (1.8.1-2build1) ... 588s Selecting previously unselected package libtirpc-dev:armhf. 588s Preparing to unpack .../175-libtirpc-dev_1.3.4+ds-1.3_armhf.deb ... 588s Unpacking libtirpc-dev:armhf (1.3.4+ds-1.3) ... 588s Selecting previously unselected package r-base-dev. 588s Preparing to unpack .../176-r-base-dev_4.4.0-2_all.deb ... 588s Unpacking r-base-dev (4.4.0-2) ... 588s Selecting previously unselected package pkg-r-autopkgtest. 588s Preparing to unpack .../177-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 588s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 588s Selecting previously unselected package r-cran-abind. 588s Preparing to unpack .../178-r-cran-abind_1.4-5-2_all.deb ... 588s Unpacking r-cran-abind (1.4-5-2) ... 588s Selecting previously unselected package r-cran-cli. 588s Preparing to unpack .../179-r-cran-cli_3.6.2-1_armhf.deb ... 588s Unpacking r-cran-cli (3.6.2-1) ... 588s Selecting previously unselected package r-cran-generics. 588s Preparing to unpack .../180-r-cran-generics_0.1.3-1_all.deb ... 588s Unpacking r-cran-generics (0.1.3-1) ... 588s Selecting previously unselected package r-cran-glue. 588s Preparing to unpack .../181-r-cran-glue_1.7.0-1_armhf.deb ... 588s Unpacking r-cran-glue (1.7.0-1) ... 588s Selecting previously unselected package r-cran-rlang. 588s Preparing to unpack .../182-r-cran-rlang_1.1.3-1_armhf.deb ... 588s Unpacking r-cran-rlang (1.1.3-1) ... 588s Selecting previously unselected package r-cran-lifecycle. 588s Preparing to unpack .../183-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 588s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 588s Selecting previously unselected package r-cran-magrittr. 588s Preparing to unpack .../184-r-cran-magrittr_2.0.3-1_armhf.deb ... 588s Unpacking r-cran-magrittr (2.0.3-1) ... 588s Selecting previously unselected package r-cran-fansi. 588s Preparing to unpack .../185-r-cran-fansi_1.0.5-1_armhf.deb ... 588s Unpacking r-cran-fansi (1.0.5-1) ... 588s Selecting previously unselected package r-cran-utf8. 588s Preparing to unpack .../186-r-cran-utf8_1.2.4-1_armhf.deb ... 588s Unpacking r-cran-utf8 (1.2.4-1) ... 588s Selecting previously unselected package r-cran-vctrs. 588s Preparing to unpack .../187-r-cran-vctrs_0.6.5-1_armhf.deb ... 588s Unpacking r-cran-vctrs (0.6.5-1) ... 588s Selecting previously unselected package r-cran-pillar. 588s Preparing to unpack .../188-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 588s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 588s Selecting previously unselected package r-cran-r6. 588s Preparing to unpack .../189-r-cran-r6_2.5.1-1_all.deb ... 588s Unpacking r-cran-r6 (2.5.1-1) ... 588s Selecting previously unselected package r-cran-pkgconfig. 588s Preparing to unpack .../190-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 588s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 588s Selecting previously unselected package r-cran-tibble. 589s Preparing to unpack .../191-r-cran-tibble_3.2.1+dfsg-2_armhf.deb ... 589s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 589s Selecting previously unselected package r-cran-withr. 589s Preparing to unpack .../192-r-cran-withr_2.5.0-1_all.deb ... 589s Unpacking r-cran-withr (2.5.0-1) ... 589s Selecting previously unselected package r-cran-tidyselect. 589s Preparing to unpack .../193-r-cran-tidyselect_1.2.0+dfsg-1_armhf.deb ... 589s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 589s Selecting previously unselected package r-cran-dplyr. 589s Preparing to unpack .../194-r-cran-dplyr_1.1.4-1_armhf.deb ... 589s Unpacking r-cran-dplyr (1.1.4-1) ... 589s Selecting previously unselected package r-cran-purrr. 589s Preparing to unpack .../195-r-cran-purrr_1.0.2-1_armhf.deb ... 589s Unpacking r-cran-purrr (1.0.2-1) ... 589s Selecting previously unselected package r-cran-mass. 589s Preparing to unpack .../196-r-cran-mass_7.3-60.0.1-1_armhf.deb ... 589s Unpacking r-cran-mass (7.3-60.0.1-1) ... 589s Selecting previously unselected package r-cran-class. 589s Preparing to unpack .../197-r-cran-class_7.3-22-2build1_armhf.deb ... 589s Unpacking r-cran-class (7.3-22-2build1) ... 589s Selecting previously unselected package r-cran-proxy. 589s Preparing to unpack .../198-r-cran-proxy_0.4-27-1_armhf.deb ... 589s Unpacking r-cran-proxy (0.4-27-1) ... 589s Selecting previously unselected package r-cran-e1071. 589s Preparing to unpack .../199-r-cran-e1071_1.7-14-1_armhf.deb ... 589s Unpacking r-cran-e1071 (1.7-14-1) ... 589s Selecting previously unselected package r-cran-kernsmooth. 589s Preparing to unpack .../200-r-cran-kernsmooth_2.23-24-1_armhf.deb ... 589s Unpacking r-cran-kernsmooth (2.23-24-1) ... 589s Selecting previously unselected package r-cran-classint. 589s Preparing to unpack .../201-r-cran-classint_0.4-10+dfsg-1_armhf.deb ... 589s Unpacking r-cran-classint (0.4-10+dfsg-1) ... 589s Selecting previously unselected package r-cran-dbi. 589s Preparing to unpack .../202-r-cran-dbi_1.2.2-1_all.deb ... 589s Unpacking r-cran-dbi (1.2.2-1) ... 589s Selecting previously unselected package r-cran-pkgkitten. 589s Preparing to unpack .../203-r-cran-pkgkitten_0.2.3-1_all.deb ... 589s Unpacking r-cran-pkgkitten (0.2.3-1) ... 589s Selecting previously unselected package r-cran-rcpp. 589s Preparing to unpack .../204-r-cran-rcpp_1.0.12-1_armhf.deb ... 589s Unpacking r-cran-rcpp (1.0.12-1) ... 589s Selecting previously unselected package r-cran-wk. 589s Preparing to unpack .../205-r-cran-wk_0.9.1-1_armhf.deb ... 589s Unpacking r-cran-wk (0.9.1-1) ... 589s Selecting previously unselected package r-cran-s2. 589s Preparing to unpack .../206-r-cran-s2_1.1.6-1build2_armhf.deb ... 589s Unpacking r-cran-s2 (1.1.6-1build2) ... 589s Selecting previously unselected package r-cran-units. 589s Preparing to unpack .../207-r-cran-units_0.8-5+dfsg-1_armhf.deb ... 589s Unpacking r-cran-units (0.8-5+dfsg-1) ... 589s Selecting previously unselected package r-cran-sf. 589s Preparing to unpack .../208-r-cran-sf_1.0-16+dfsg-1_armhf.deb ... 589s Unpacking r-cran-sf (1.0-16+dfsg-1) ... 589s Selecting previously unselected package r-cran-areal. 589s Preparing to unpack .../209-r-cran-areal_0.1.8+dfsg-2_all.deb ... 589s Unpacking r-cran-areal (0.1.8+dfsg-2) ... 589s Selecting previously unselected package r-cran-sys. 589s Preparing to unpack .../210-r-cran-sys_3.4.2-1_armhf.deb ... 589s Unpacking r-cran-sys (3.4.2-1) ... 590s Selecting previously unselected package r-cran-askpass. 590s Preparing to unpack .../211-r-cran-askpass_1.2.0-1_armhf.deb ... 590s Unpacking r-cran-askpass (1.2.0-1) ... 590s Selecting previously unselected package r-cran-base64enc. 590s Preparing to unpack .../212-r-cran-base64enc_0.1-3-3_armhf.deb ... 590s Unpacking r-cran-base64enc (0.1-3-3) ... 590s Selecting previously unselected package r-cran-bdsmatrix. 590s Preparing to unpack .../213-r-cran-bdsmatrix_1.3-7-1_armhf.deb ... 590s Unpacking r-cran-bdsmatrix (1.3-7-1) ... 590s Selecting previously unselected package r-cran-brio. 590s Preparing to unpack .../214-r-cran-brio_1.1.5-1_armhf.deb ... 590s Unpacking r-cran-brio (1.1.5-1) ... 590s Selecting previously unselected package r-cran-fastmap. 590s Preparing to unpack .../215-r-cran-fastmap_1.1.1-1_armhf.deb ... 590s Unpacking r-cran-fastmap (1.1.1-1) ... 590s Selecting previously unselected package r-cran-cachem. 590s Preparing to unpack .../216-r-cran-cachem_1.0.8-1_armhf.deb ... 590s Unpacking r-cran-cachem (1.0.8-1) ... 590s Selecting previously unselected package r-cran-digest. 590s Preparing to unpack .../217-r-cran-digest_0.6.35-1_armhf.deb ... 590s Unpacking r-cran-digest (0.6.35-1) ... 590s Selecting previously unselected package r-cran-htmltools. 590s Preparing to unpack .../218-r-cran-htmltools_0.5.8.1-1_armhf.deb ... 590s Unpacking r-cran-htmltools (0.5.8.1-1) ... 590s Selecting previously unselected package r-cran-jquerylib. 590s Preparing to unpack .../219-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 590s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 590s Selecting previously unselected package r-cran-jsonlite. 590s Preparing to unpack .../220-r-cran-jsonlite_1.8.8+dfsg-1_armhf.deb ... 590s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 590s Selecting previously unselected package r-cran-memoise. 590s Preparing to unpack .../221-r-cran-memoise_2.0.1-1_all.deb ... 590s Unpacking r-cran-memoise (2.0.1-1) ... 590s Selecting previously unselected package r-cran-mime. 590s Preparing to unpack .../222-r-cran-mime_0.12-2_armhf.deb ... 590s Unpacking r-cran-mime (0.12-2) ... 590s Selecting previously unselected package r-cran-fs. 590s Preparing to unpack .../223-r-cran-fs_1.6.3+dfsg-1build2_armhf.deb ... 590s Unpacking r-cran-fs (1.6.3+dfsg-1build2) ... 590s Selecting previously unselected package r-cran-rappdirs. 590s Preparing to unpack .../224-r-cran-rappdirs_0.3.3-1_armhf.deb ... 590s Unpacking r-cran-rappdirs (0.3.3-1) ... 590s Selecting previously unselected package r-cran-sass. 590s Preparing to unpack .../225-r-cran-sass_0.4.9+dfsg-1_armhf.deb ... 590s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 590s Selecting previously unselected package r-cran-bslib. 590s Preparing to unpack .../226-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 590s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 590s Selecting previously unselected package r-cran-cairo. 590s Preparing to unpack .../227-r-cran-cairo_1.6-2-1_armhf.deb ... 590s Unpacking r-cran-cairo (1.6-2-1) ... 590s Selecting previously unselected package r-cran-ps. 590s Preparing to unpack .../228-r-cran-ps_1.7.6-1_armhf.deb ... 590s Unpacking r-cran-ps (1.7.6-1) ... 590s Selecting previously unselected package r-cran-processx. 590s Preparing to unpack .../229-r-cran-processx_3.8.3-1_armhf.deb ... 590s Unpacking r-cran-processx (3.8.3-1) ... 590s Selecting previously unselected package r-cran-callr. 590s Preparing to unpack .../230-r-cran-callr_3.7.6-1_all.deb ... 590s Unpacking r-cran-callr (3.7.6-1) ... 590s Selecting previously unselected package r-cran-cluster. 590s Preparing to unpack .../231-r-cran-cluster_2.1.6-1build1_armhf.deb ... 590s Unpacking r-cran-cluster (2.1.6-1build1) ... 591s Selecting previously unselected package r-cran-clue. 591s Preparing to unpack .../232-r-cran-clue_0.3-65-1_armhf.deb ... 591s Unpacking r-cran-clue (0.3-65-1) ... 591s Selecting previously unselected package r-cran-codetools. 591s Preparing to unpack .../233-r-cran-codetools_0.2-20-1_all.deb ... 591s Unpacking r-cran-codetools (0.2-20-1) ... 591s Selecting previously unselected package r-cran-collapse. 591s Preparing to unpack .../234-r-cran-collapse_2.0.13-1_armhf.deb ... 591s Unpacking r-cran-collapse (2.0.13-1) ... 591s Selecting previously unselected package r-cran-colorspace. 591s Preparing to unpack .../235-r-cran-colorspace_2.1-0+dfsg-1_armhf.deb ... 591s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 591s Selecting previously unselected package r-cran-commonmark. 591s Preparing to unpack .../236-r-cran-commonmark_1.9.1-1_armhf.deb ... 591s Unpacking r-cran-commonmark (1.9.1-1) ... 591s Selecting previously unselected package r-cran-lazyeval. 591s Preparing to unpack .../237-r-cran-lazyeval_0.2.2-1build1_armhf.deb ... 591s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 591s Selecting previously unselected package r-cran-rex. 591s Preparing to unpack .../238-r-cran-rex_1.2.1-1_all.deb ... 591s Unpacking r-cran-rex (1.2.1-1) ... 591s Selecting previously unselected package r-cran-curl. 591s Preparing to unpack .../239-r-cran-curl_5.2.0+dfsg-1build2_armhf.deb ... 591s Unpacking r-cran-curl (5.2.0+dfsg-1build2) ... 591s Selecting previously unselected package r-cran-openssl. 591s Preparing to unpack .../240-r-cran-openssl_2.1.1+dfsg-2build2_armhf.deb ... 591s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ... 591s Selecting previously unselected package r-cran-httr. 591s Preparing to unpack .../241-r-cran-httr_1.4.7+dfsg-1_all.deb ... 591s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 591s Selecting previously unselected package r-cran-crayon. 591s Preparing to unpack .../242-r-cran-crayon_1.5.2-1_all.deb ... 591s Unpacking r-cran-crayon (1.5.2-1) ... 591s Selecting previously unselected package r-cran-yaml. 591s Preparing to unpack .../243-r-cran-yaml_2.3.8-2_armhf.deb ... 591s Unpacking r-cran-yaml (2.3.8-2) ... 591s Selecting previously unselected package r-cran-covr. 591s Preparing to unpack .../244-r-cran-covr_3.6.4+dfsg-1_armhf.deb ... 591s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 591s Selecting previously unselected package r-cran-cpp11. 591s Preparing to unpack .../245-r-cran-cpp11_0.4.7-1_all.deb ... 591s Unpacking r-cran-cpp11 (0.4.7-1) ... 591s Selecting previously unselected package r-cran-deldir. 591s Preparing to unpack .../246-r-cran-deldir_2.0-4-1build1_armhf.deb ... 591s Unpacking r-cran-deldir (2.0-4-1build1) ... 591s Selecting previously unselected package r-cran-desc. 591s Preparing to unpack .../247-r-cran-desc_1.4.3-1_all.deb ... 591s Unpacking r-cran-desc (1.4.3-1) ... 591s Selecting previously unselected package r-cran-diffobj. 591s Preparing to unpack .../248-r-cran-diffobj_0.3.5-1_armhf.deb ... 591s Unpacking r-cran-diffobj (0.3.5-1) ... 591s Selecting previously unselected package r-cran-evaluate. 591s Preparing to unpack .../249-r-cran-evaluate_0.23-1_all.deb ... 591s Unpacking r-cran-evaluate (0.23-1) ... 591s Selecting previously unselected package r-cran-farver. 591s Preparing to unpack .../250-r-cran-farver_2.1.1-2_armhf.deb ... 591s Unpacking r-cran-farver (2.1.1-2) ... 592s Selecting previously unselected package r-cran-fnn. 592s Preparing to unpack .../251-r-cran-fnn_1.1.4-1_armhf.deb ... 592s Unpacking r-cran-fnn (1.1.4-1) ... 592s Selecting previously unselected package r-cran-fontawesome. 592s Preparing to unpack .../252-r-cran-fontawesome_0.5.2-1_all.deb ... 592s Unpacking r-cran-fontawesome (0.5.2-1) ... 592s Selecting previously unselected package r-cran-formula. 592s Preparing to unpack .../253-r-cran-formula_1.2-5-1_all.deb ... 592s Unpacking r-cran-formula (1.2-5-1) ... 592s Selecting previously unselected package r-cran-globals. 592s Preparing to unpack .../254-r-cran-globals_0.16.3-1_all.deb ... 592s Unpacking r-cran-globals (0.16.3-1) ... 592s Selecting previously unselected package r-cran-listenv. 592s Preparing to unpack .../255-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 592s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 592s Selecting previously unselected package r-cran-parallelly. 592s Preparing to unpack .../256-r-cran-parallelly_1.37.1-1build1_armhf.deb ... 592s Unpacking r-cran-parallelly (1.37.1-1build1) ... 592s Selecting previously unselected package r-cran-future. 592s Preparing to unpack .../257-r-cran-future_1.33.1+dfsg-1_all.deb ... 592s Unpacking r-cran-future (1.33.1+dfsg-1) ... 592s Selecting previously unselected package r-cran-future.apply. 592s Preparing to unpack .../258-r-cran-future.apply_1.11.2+dfsg-1_all.deb ... 592s Unpacking r-cran-future.apply (1.11.2+dfsg-1) ... 592s Selecting previously unselected package r-cran-gtable. 592s Preparing to unpack .../259-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 592s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 592s Selecting previously unselected package r-cran-isoband. 592s Preparing to unpack .../260-r-cran-isoband_0.2.7-1_armhf.deb ... 592s Unpacking r-cran-isoband (0.2.7-1) ... 592s Selecting previously unselected package r-cran-lattice. 592s Preparing to unpack .../261-r-cran-lattice_0.22-6-1_armhf.deb ... 592s Unpacking r-cran-lattice (0.22-6-1) ... 592s Selecting previously unselected package r-cran-nlme. 592s Preparing to unpack .../262-r-cran-nlme_3.1.164-1build1_armhf.deb ... 592s Unpacking r-cran-nlme (3.1.164-1build1) ... 592s Selecting previously unselected package r-cran-matrix. 592s Preparing to unpack .../263-r-cran-matrix_1.6-5-1_armhf.deb ... 592s Unpacking r-cran-matrix (1.6-5-1) ... 592s Selecting previously unselected package r-cran-mgcv. 592s Preparing to unpack .../264-r-cran-mgcv_1.9-1-1_armhf.deb ... 592s Unpacking r-cran-mgcv (1.9-1-1) ... 592s Selecting previously unselected package r-cran-labeling. 592s Preparing to unpack .../265-r-cran-labeling_0.4.3-1_all.deb ... 592s Unpacking r-cran-labeling (0.4.3-1) ... 592s Selecting previously unselected package r-cran-munsell. 592s Preparing to unpack .../266-r-cran-munsell_0.5.0-2build1_all.deb ... 592s Unpacking r-cran-munsell (0.5.0-2build1) ... 592s Selecting previously unselected package r-cran-rcolorbrewer. 592s Preparing to unpack .../267-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 592s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 592s Selecting previously unselected package r-cran-viridislite. 592s Preparing to unpack .../268-r-cran-viridislite_0.4.2-2_all.deb ... 592s Unpacking r-cran-viridislite (0.4.2-2) ... 592s Selecting previously unselected package r-cran-scales. 592s Preparing to unpack .../269-r-cran-scales_1.3.0-1_all.deb ... 592s Unpacking r-cran-scales (1.3.0-1) ... 592s Selecting previously unselected package r-cran-ggplot2. 592s Preparing to unpack .../270-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 592s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 592s Selecting previously unselected package r-cran-tweenr. 593s Preparing to unpack .../271-r-cran-tweenr_2.0.3-1_armhf.deb ... 593s Unpacking r-cran-tweenr (2.0.3-1) ... 593s Selecting previously unselected package r-cran-polyclip. 593s Preparing to unpack .../272-r-cran-polyclip_1.10-6-1_armhf.deb ... 593s Unpacking r-cran-polyclip (1.10-6-1) ... 593s Selecting previously unselected package r-cran-systemfonts. 593s Preparing to unpack .../273-r-cran-systemfonts_1.0.5-1_armhf.deb ... 593s Unpacking r-cran-systemfonts (1.0.5-1) ... 593s Selecting previously unselected package r-cran-rcppeigen. 593s Preparing to unpack .../274-r-cran-rcppeigen_0.3.4.0.0-1build1_armhf.deb ... 593s Unpacking r-cran-rcppeigen (0.3.4.0.0-1build1) ... 593s Selecting previously unselected package r-cran-ggforce. 593s Preparing to unpack .../275-r-cran-ggforce_0.4.2-1_armhf.deb ... 593s Unpacking r-cran-ggforce (0.4.2-1) ... 593s Selecting previously unselected package r-cran-stringi. 593s Preparing to unpack .../276-r-cran-stringi_1.8.3-1_armhf.deb ... 593s Unpacking r-cran-stringi (1.8.3-1) ... 594s Selecting previously unselected package r-cran-stringr. 594s Preparing to unpack .../277-r-cran-stringr_1.5.1-1_all.deb ... 594s Unpacking r-cran-stringr (1.5.1-1) ... 594s Selecting previously unselected package r-cran-ggthemes. 594s Preparing to unpack .../278-r-cran-ggthemes_5.1.0-1_all.deb ... 594s Unpacking r-cran-ggthemes (5.1.0-1) ... 594s Selecting previously unselected package r-cran-goftest. 594s Preparing to unpack .../279-r-cran-goftest_1.2-3-1_armhf.deb ... 594s Unpacking r-cran-goftest (1.2-3-1) ... 594s Selecting previously unselected package r-cran-gridextra. 594s Preparing to unpack .../280-r-cran-gridextra_2.3-3build1_all.deb ... 594s Unpacking r-cran-gridextra (2.3-3build1) ... 594s Selecting previously unselected package r-cran-xfun. 594s Preparing to unpack .../281-r-cran-xfun_0.44+dfsg-1_armhf.deb ... 594s Unpacking r-cran-xfun (0.44+dfsg-1) ... 594s Selecting previously unselected package r-cran-highr. 594s Preparing to unpack .../282-r-cran-highr_0.10+dfsg-2_all.deb ... 594s Unpacking r-cran-highr (0.10+dfsg-2) ... 594s Selecting previously unselected package r-cran-later. 594s Preparing to unpack .../283-r-cran-later_1.3.2+dfsg-1_armhf.deb ... 594s Unpacking r-cran-later (1.3.2+dfsg-1) ... 594s Selecting previously unselected package r-cran-promises. 594s Preparing to unpack .../284-r-cran-promises_1.3.0+dfsg-1_armhf.deb ... 594s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 594s Selecting previously unselected package r-cran-httpuv. 594s Preparing to unpack .../285-r-cran-httpuv_1.6.15+dfsg-1_armhf.deb ... 594s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 594s Selecting previously unselected package r-cran-intervals. 594s Preparing to unpack .../286-r-cran-intervals_0.15.4-1_armhf.deb ... 594s Unpacking r-cran-intervals (0.15.4-1) ... 594s Selecting previously unselected package libjs-mathjax. 594s Preparing to unpack .../287-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 594s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 594s Selecting previously unselected package r-cran-knitr. 594s Preparing to unpack .../288-r-cran-knitr_1.46+dfsg-1_all.deb ... 594s Unpacking r-cran-knitr (1.46+dfsg-1) ... 594s Selecting previously unselected package r-cran-zoo. 594s Preparing to unpack .../289-r-cran-zoo_1.8-12-2_armhf.deb ... 594s Unpacking r-cran-zoo (1.8-12-2) ... 594s Selecting previously unselected package r-cran-lmtest. 594s Preparing to unpack .../290-r-cran-lmtest_0.9.40-1_armhf.deb ... 594s Unpacking r-cran-lmtest (0.9.40-1) ... 594s Selecting previously unselected package r-cran-lwgeom. 594s Preparing to unpack .../291-r-cran-lwgeom_0.2-13-3build2_armhf.deb ... 594s Unpacking r-cran-lwgeom (0.2-13-3build2) ... 594s Selecting previously unselected package r-cran-maps. 594s Preparing to unpack .../292-r-cran-maps_3.4.2-1_armhf.deb ... 594s Unpacking r-cran-maps (3.4.2-1) ... 594s Selecting previously unselected package r-cran-mapdata. 594s Preparing to unpack .../293-r-cran-mapdata_2.3.1-1_armhf.deb ... 594s Unpacking r-cran-mapdata (2.3.1-1) ... 595s Selecting previously unselected package r-cran-misctools. 595s Preparing to unpack .../294-r-cran-misctools_0.6-28-1_all.deb ... 595s Unpacking r-cran-misctools (0.6-28-1) ... 595s Selecting previously unselected package r-cran-sandwich. 595s Preparing to unpack .../295-r-cran-sandwich_3.1-0-1_all.deb ... 595s Unpacking r-cran-sandwich (3.1-0-1) ... 595s Selecting previously unselected package r-cran-maxlik. 595s Preparing to unpack .../296-r-cran-maxlik_1.5-2-1_all.deb ... 595s Unpacking r-cran-maxlik (1.5-2-1) ... 595s Selecting previously unselected package r-cran-rnetcdf. 595s Preparing to unpack .../297-r-cran-rnetcdf_2.9-1-1build2_armhf.deb ... 595s Unpacking r-cran-rnetcdf (2.9-1-1build2) ... 595s Selecting previously unselected package r-cran-tidyr. 595s Preparing to unpack .../298-r-cran-tidyr_1.3.1-1_armhf.deb ... 595s Unpacking r-cran-tidyr (1.3.1-1) ... 595s Selecting previously unselected package r-cran-ncmeta. 595s Preparing to unpack .../299-r-cran-ncmeta_0.3.6-1_all.deb ... 595s Unpacking r-cran-ncmeta (0.3.6-1) ... 595s Selecting previously unselected package r-cran-stars. 595s Preparing to unpack .../300-r-cran-stars_0.6-4-1_all.deb ... 595s Unpacking r-cran-stars (0.6-4-1) ... 595s Selecting previously unselected package r-cran-ncdfgeom. 595s Preparing to unpack .../301-r-cran-ncdfgeom_1.1.6+dfsg-1_all.deb ... 595s Unpacking r-cran-ncdfgeom (1.1.6+dfsg-1) ... 595s Selecting previously unselected package r-cran-pbapply. 596s Preparing to unpack .../302-r-cran-pbapply_1.7-2-1_all.deb ... 596s Unpacking r-cran-pbapply (1.7-2-1) ... 596s Selecting previously unselected package r-cran-pcict. 596s Preparing to unpack .../303-r-cran-pcict_0.5-4.4-1_armhf.deb ... 596s Unpacking r-cran-pcict (0.5-4.4-1) ... 596s Selecting previously unselected package r-cran-pkgbuild. 596s Preparing to unpack .../304-r-cran-pkgbuild_1.4.3-1_all.deb ... 596s Unpacking r-cran-pkgbuild (1.4.3-1) ... 596s Selecting previously unselected package r-cran-rprojroot. 596s Preparing to unpack .../305-r-cran-rprojroot_2.0.4-1_all.deb ... 596s Unpacking r-cran-rprojroot (2.0.4-1) ... 596s Selecting previously unselected package r-cran-pkgload. 596s Preparing to unpack .../306-r-cran-pkgload_1.3.4-1_all.deb ... 596s Unpacking r-cran-pkgload (1.3.4-1) ... 596s Selecting previously unselected package r-cran-rbibutils. 596s Preparing to unpack .../307-r-cran-rbibutils_2.2.16-1_armhf.deb ... 596s Unpacking r-cran-rbibutils (2.2.16-1) ... 596s Selecting previously unselected package r-cran-rdpack. 596s Preparing to unpack .../308-r-cran-rdpack_2.6-1_all.deb ... 596s Unpacking r-cran-rdpack (2.6-1) ... 596s Selecting previously unselected package r-cran-plm. 596s Preparing to unpack .../309-r-cran-plm_2.6-4-1_all.deb ... 596s Unpacking r-cran-plm (2.6-4-1) ... 596s Selecting previously unselected package r-cran-praise. 596s Preparing to unpack .../310-r-cran-praise_1.0.0-4build1_all.deb ... 596s Unpacking r-cran-praise (1.0.0-4build1) ... 596s Selecting previously unselected package r-cran-randomforest. 596s Preparing to unpack .../311-r-cran-randomforest_4.7-1.1-1_armhf.deb ... 596s Unpacking r-cran-randomforest (4.7-1.1-1) ... 596s Selecting previously unselected package r-cran-sp. 596s Preparing to unpack .../312-r-cran-sp_1%3a2.1-2+dfsg-1_armhf.deb ... 596s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 596s Selecting previously unselected package r-cran-terra. 596s Preparing to unpack .../313-r-cran-terra_1.7-65-1build2_armhf.deb ... 596s Unpacking r-cran-terra (1.7-65-1build2) ... 596s Selecting previously unselected package r-cran-raster. 596s Preparing to unpack .../314-r-cran-raster_3.6-26-1_armhf.deb ... 596s Unpacking r-cran-raster (3.6-26-1) ... 596s Selecting previously unselected package r-cran-rematch2. 596s Preparing to unpack .../315-r-cran-rematch2_2.1.2-2build1_all.deb ... 596s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 596s Selecting previously unselected package r-cran-tinytex. 596s Preparing to unpack .../316-r-cran-tinytex_0.49-1_all.deb ... 596s Unpacking r-cran-tinytex (0.49-1) ... 596s Selecting previously unselected package libjs-modernizr. 596s Preparing to unpack .../317-libjs-modernizr_3.13.0-0.1_all.deb ... 596s Unpacking libjs-modernizr (3.13.0-0.1) ... 596s Selecting previously unselected package r-cran-xtable. 596s Preparing to unpack .../318-r-cran-xtable_1%3a1.8-4-2_all.deb ... 596s Unpacking r-cran-xtable (1:1.8-4-2) ... 596s Selecting previously unselected package r-cran-sourcetools. 596s Preparing to unpack .../319-r-cran-sourcetools_0.1.7-1-1_armhf.deb ... 596s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 596s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 597s Preparing to unpack .../320-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 597s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 597s Selecting previously unselected package r-cran-shiny. 597s Preparing to unpack .../321-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 597s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 597s Selecting previously unselected package r-cran-rmarkdown. 597s Preparing to unpack .../322-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 597s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 597s Selecting previously unselected package r-cran-survival. 597s Preparing to unpack .../323-r-cran-survival_3.5-8-1_armhf.deb ... 597s 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(1.0-16+dfsg-1) ... 602s Setting up r-cran-stars (0.6-4-1) ... 602s Setting up r-cran-areal (0.1.8+dfsg-2) ... 602s Setting up r-cran-raster (3.6-26-1) ... 602s Setting up r-cran-lwgeom (0.2-13-3build2) ... 602s Setting up r-cran-ncdfgeom (1.1.6+dfsg-1) ... 602s Setting up autopkgtest-satdep (0) ... 602s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 602s Processing triggers for man-db (2.12.1-1) ... 603s Processing triggers for install-info (7.1-3build2) ... 653s (Reading database ... 86162 files and directories currently installed.) 653s Removing autopkgtest-satdep (0) ... 667s autopkgtest [08:41:35]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 667s autopkgtest [08:41:35]: test pkg-r-autopkgtest: [----------------------- 669s Test: Try to load the R library stars 669s 669s R version 4.4.0 (2024-04-24) -- "Puppy Cup" 669s Copyright (C) 2024 The R Foundation for Statistical Computing 669s Platform: arm-unknown-linux-gnueabihf (32-bit) 669s 669s R is free software and comes with ABSOLUTELY NO WARRANTY. 669s You are welcome to redistribute it under certain conditions. 669s Type 'license()' or 'licence()' for distribution details. 669s 669s R is a collaborative project with many contributors. 669s Type 'contributors()' for more information and 669s 'citation()' on how to cite R or R packages in publications. 669s 669s Type 'demo()' for some demos, 'help()' for on-line help, or 669s 'help.start()' for an HTML browser interface to help. 669s Type 'q()' to quit R. 669s 669s > library('stars') 669s Loading required package: abind 669s Loading required package: sf 669s Linking to GEOS 3.12.1, GDAL 3.8.5, PROJ 9.4.0; sf_use_s2() is TRUE 670s > 670s > 670s Other tests are currently unsupported! 670s They will be progressively added. 670s autopkgtest [08:41:38]: test pkg-r-autopkgtest: -----------------------] 674s autopkgtest [08:41:42]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 674s pkg-r-autopkgtest PASS 678s autopkgtest [08:41:46]: @@@@@@@@@@@@@@@@@@@@ summary 678s run-unit-test PASS 678s pkg-r-autopkgtest PASS