0s autopkgtest [01:25:37]: starting date and time: 2024-07-11 01:25:37+0000 0s autopkgtest [01:25:37]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [01:25:37]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.86a_z0q6/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:pandas --apt-upgrade q2-diversity-lib --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pandas/2.2.2+dfsg-4 -- lxd -r lxd-armhf-10.145.243.183 lxd-armhf-10.145.243.183:autopkgtest/ubuntu/oracular/armhf 26s autopkgtest [01:26:03]: testbed dpkg architecture: armhf 28s autopkgtest [01:26:05]: testbed apt version: 2.9.6 28s autopkgtest [01:26:05]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 37s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 37s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [336 kB] 38s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [55.3 kB] 38s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 38s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [76.8 kB] 38s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf c-n-f Metadata [1824 B] 38s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf Packages [1368 B] 38s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf c-n-f Metadata [120 B] 38s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [294 kB] 38s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf c-n-f Metadata [6132 B] 38s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1448 B] 38s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf c-n-f Metadata [120 B] 40s Fetched 910 kB in 1s (910 kB/s) 40s Reading package lists... 59s tee: /proc/self/fd/2: Permission denied 82s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 83s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 83s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 83s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 84s Reading package lists... 84s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Calculating upgrade... 86s The following package was automatically installed and is no longer required: 86s systemd-dev 86s Use 'apt autoremove' to remove it. 86s The following packages will be upgraded: 86s curl libcurl3t64-gnutls libcurl4t64 libgcrypt20 libnss-systemd 86s libpam-systemd libsystemd-shared libsystemd0 libudev1 systemd systemd-dev 86s systemd-resolved systemd-sysv systemd-timesyncd udev 86s 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s Need to get 10.5 MB of archives. 86s After this operation, 1602 kB of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf libnss-systemd armhf 256-1ubuntu1 [153 kB] 86s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf systemd-dev all 256-1ubuntu1 [111 kB] 86s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf systemd-timesyncd armhf 256-1ubuntu1 [36.3 kB] 86s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf systemd-resolved armhf 256-1ubuntu1 [306 kB] 86s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf libsystemd-shared armhf 256-1ubuntu1 [2114 kB] 86s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf libsystemd0 armhf 256-1ubuntu1 [420 kB] 86s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf systemd-sysv armhf 256-1ubuntu1 [11.8 kB] 86s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf libpam-systemd armhf 256-1ubuntu1 [224 kB] 86s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf systemd armhf 256-1ubuntu1 [3681 kB] 87s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf udev armhf 256-1ubuntu1 [1941 kB] 87s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf libudev1 armhf 256-1ubuntu1 [185 kB] 87s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf libgcrypt20 armhf 1.11.0-2 [506 kB] 87s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf curl armhf 8.8.0-3ubuntu3 [227 kB] 87s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl4t64 armhf 8.8.0-3ubuntu3 [313 kB] 87s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf libcurl3t64-gnutls armhf 8.8.0-3ubuntu3 [307 kB] 87s Fetched 10.5 MB in 1s (10.5 MB/s) 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58416 files and directories currently installed.) 87s Preparing to unpack .../0-libnss-systemd_256-1ubuntu1_armhf.deb ... 87s Unpacking libnss-systemd:armhf (256-1ubuntu1) over (255.4-1ubuntu8) ... 87s Preparing to unpack .../1-systemd-dev_256-1ubuntu1_all.deb ... 87s Unpacking systemd-dev (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../2-systemd-timesyncd_256-1ubuntu1_armhf.deb ... 88s Unpacking systemd-timesyncd (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../3-systemd-resolved_256-1ubuntu1_armhf.deb ... 88s Unpacking systemd-resolved (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../4-libsystemd-shared_256-1ubuntu1_armhf.deb ... 88s Unpacking libsystemd-shared:armhf (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../5-libsystemd0_256-1ubuntu1_armhf.deb ... 88s Unpacking libsystemd0:armhf (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Setting up libsystemd0:armhf (256-1ubuntu1) ... 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58418 files and directories currently installed.) 88s Preparing to unpack .../systemd-sysv_256-1ubuntu1_armhf.deb ... 88s Unpacking systemd-sysv (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../libpam-systemd_256-1ubuntu1_armhf.deb ... 88s Unpacking libpam-systemd:armhf (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../systemd_256-1ubuntu1_armhf.deb ... 88s Unpacking systemd (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../udev_256-1ubuntu1_armhf.deb ... 88s Unpacking udev (256-1ubuntu1) over (255.4-1ubuntu8) ... 88s Preparing to unpack .../libudev1_256-1ubuntu1_armhf.deb ... 88s Unpacking libudev1:armhf (256-1ubuntu1) over (255.4-1ubuntu8) ... 89s Setting up libudev1:armhf (256-1ubuntu1) ... 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58480 files and directories currently installed.) 89s Preparing to unpack .../libgcrypt20_1.11.0-2_armhf.deb ... 89s Unpacking libgcrypt20:armhf (1.11.0-2) over (1.10.3-3) ... 89s Setting up libgcrypt20:armhf (1.11.0-2) ... 89s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58480 files and directories currently installed.) 89s Preparing to unpack .../curl_8.8.0-3ubuntu3_armhf.deb ... 89s Unpacking curl (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 89s Preparing to unpack .../libcurl4t64_8.8.0-3ubuntu3_armhf.deb ... 89s Unpacking libcurl4t64:armhf (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 89s Preparing to unpack .../libcurl3t64-gnutls_8.8.0-3ubuntu3_armhf.deb ... 89s Unpacking libcurl3t64-gnutls:armhf (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 89s Setting up libcurl4t64:armhf (8.8.0-3ubuntu3) ... 89s Setting up libcurl3t64-gnutls:armhf (8.8.0-3ubuntu3) ... 89s Setting up systemd-dev (256-1ubuntu1) ... 89s Setting up libsystemd-shared:armhf (256-1ubuntu1) ... 89s Setting up curl (8.8.0-3ubuntu3) ... 89s Setting up systemd (256-1ubuntu1) ... 89s Installing new version of config file /etc/systemd/journald.conf ... 89s Installing new version of config file /etc/systemd/logind.conf ... 89s Installing new version of config file /etc/systemd/networkd.conf ... 89s Installing new version of config file /etc/systemd/sleep.conf ... 89s Installing new version of config file /etc/systemd/system.conf ... 89s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 89s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 89s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 90s Setting up systemd-timesyncd (256-1ubuntu1) ... 90s Setting up udev (256-1ubuntu1) ... 91s Setting up systemd-resolved (256-1ubuntu1) ... 91s Installing new version of config file /etc/systemd/resolved.conf ... 92s Setting up systemd-sysv (256-1ubuntu1) ... 92s Setting up libnss-systemd:armhf (256-1ubuntu1) ... 92s Setting up libpam-systemd:armhf (256-1ubuntu1) ... 92s Processing triggers for libc-bin (2.39-0ubuntu9) ... 92s Processing triggers for man-db (2.12.1-2) ... 93s Processing triggers for dbus (1.14.10-4ubuntu4) ... 93s Processing triggers for shared-mime-info (2.4-5) ... 93s Warning: program compiled against libxml 212 using older 209 94s Processing triggers for initramfs-tools (0.142ubuntu29) ... 94s Reading package lists... 94s Building dependency tree... 94s Reading state information... 95s The following packages will be REMOVED: 95s systemd-dev* 96s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 96s After this operation, 760 kB disk space will be freed. 96s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58484 files and directories currently installed.) 96s Removing systemd-dev (256-1ubuntu1) ... 98s autopkgtest [01:27:15]: rebooting testbed after setup commands that affected boot 172s autopkgtest [01:28:29]: testbed running kernel: Linux 6.5.0-41-generic #41~22.04.2-Ubuntu SMP PREEMPT_DYNAMIC Mon Jun 3 16:28:24 UTC 2 200s autopkgtest [01:28:57]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-diversity-lib 210s Get:1 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (dsc) [2283 B] 210s Get:2 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (tar) [331 kB] 210s Get:3 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (diff) [9348 B] 210s gpgv: Signature made Wed Jul 10 13:06:22 2024 UTC 210s gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 210s gpgv: Can't check signature: No public key 210s dpkg-source: warning: cannot verify inline signature for ./q2-diversity-lib_2024.5.0-1ubuntu1.dsc: no acceptable signature found 211s autopkgtest [01:29:08]: testing package q2-diversity-lib version 2024.5.0-1ubuntu1 213s autopkgtest [01:29:10]: build not needed 215s autopkgtest [01:29:12]: test run-unit-test: preparing testbed 226s Reading package lists... 226s Building dependency tree... 226s Reading state information... 226s Starting pkgProblemResolver with broken count: 1 226s Starting 2 pkgProblemResolver with broken count: 1 226s Investigating (0) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 226s Broken q2-diversity-lib:armhf Depends on python3-pandas:armhf < none | 2.2.2+dfsg-4 @un uH > 226s Considering python3-pandas:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated python3-dateutil:armhf 226s Re-Instated libblas3:armhf 226s Re-Instated libgfortran5:armhf 226s Re-Instated liblapack3:armhf 226s Re-Instated python3-numpy:armhf 226s Re-Instated python3-tz:armhf 226s Re-Instated python3-pandas-lib:armhf 226s Re-Instated python3-pandas:armhf 226s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 226s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated python3-joblib:armhf 226s Re-Instated python3-decorator:armhf 226s Re-Instated liblbfgsb0:armhf 226s Re-Instated python3-scipy:armhf 226s Re-Instated python3-threadpoolctl:armhf 226s Re-Instated libgomp1:armhf 226s Re-Instated python3-sklearn-lib:armhf 226s Re-Instated python3-sklearn:armhf 226s Broken q2-diversity-lib:armhf Depends on qiime:armhf < none | 2024.5.0-1ubuntu1 @un uH > (>= 2024.5) 226s Considering qiime:armhf 0 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated python3-platformdirs:armhf 226s Re-Instated python3-bibtexparser:armhf 226s Re-Instated python3-dill:armhf 226s Re-Instated libxslt1.1:armhf 226s Re-Instated python3-lxml:armhf 226s Re-Instated python3-filelock:armhf 226s Re-Instated python3-globus-sdk:armhf 226s Re-Instated python3-bcrypt:armhf 226s Re-Instated libsodium23:armhf 226s Re-Instated python3-nacl:armhf 226s Re-Instated python3-paramiko:armhf 226s Re-Instated python3-psutil:armhf 226s Re-Instated python3-setproctitle:armhf 226s Re-Instated python3-tblib:armhf 226s Re-Instated python3-typeguard:armhf 226s Re-Instated python3-py:armhf 226s Re-Instated libnorm1t64:armhf 226s Re-Instated libpgm-5.3-0t64:armhf 226s Re-Instated libzmq5:armhf 226s Re-Instated python3-zmq:armhf 226s Re-Instated fonts-glyphicons-halflings:armhf 226s Re-Instated libjs-bootstrap:armhf 226s Re-Instated javascript-common:armhf 226s Re-Instated libjs-popper.js:armhf 226s Re-Instated node-fortawesome-fontawesome-free:armhf 226s Re-Instated python3-colorama:armhf 226s Re-Instated python3-click:armhf 226s Re-Instated python3-itsdangerous:armhf 226s Re-Instated python3-werkzeug:armhf 226s Re-Instated python3-flask:armhf 226s Re-Instated python3-greenlet:armhf 226s Re-Instated python3-sqlalchemy:armhf 226s Re-Instated python3-flask-sqlalchemy:armhf 226s Re-Instated python3-parsl:armhf 226s Re-Instated python3-tomlkit:armhf 226s Re-Instated python3-tzlocal:armhf 226s Re-Instated python3-networkx:armhf 226s Re-Instated python3-public:armhf 226s Re-Instated python3-flufl.lock:armhf 226s Re-Instated qiime:armhf 226s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 226s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 0 226s Reinst Failed early because of python3-skbio:armhf 226s Reinst Failed because of python3-emperor:armhf 226s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 226s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 0 226s Reinst Failed early because of python3-skbio:armhf 226s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 226s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated zip:armhf 226s Re-Instated unzip:armhf 226s Re-Instated libpaper1:armhf 226s Re-Instated libpaper-utils:armhf 226s Re-Instated xdg-utils:armhf 226s Re-Instated libfreetype6:armhf 226s Re-Instated fonts-dejavu-mono:armhf 226s Re-Instated fonts-dejavu-core:armhf 226s Re-Instated fontconfig-config:armhf 226s Re-Instated libfontconfig1:armhf 226s Re-Instated libpixman-1-0:armhf 226s Re-Instated libxcb-render0:armhf 226s Re-Instated libxcb-shm0:armhf 226s Re-Instated libxrender1:armhf 226s Re-Instated libcairo2:armhf 226s Re-Instated libdeflate0:armhf 226s Re-Instated libjpeg-turbo8:armhf 226s Re-Instated libjpeg8:armhf 226s Re-Instated fontconfig:armhf 226s Re-Instated libgraphite2-3:armhf 226s Re-Instated libharfbuzz0b:armhf 226s Re-Instated libthai-data:armhf 226s Re-Instated libdatrie1:armhf 226s Re-Instated libthai0:armhf 226s Re-Instated libpango-1.0-0:armhf 226s Re-Instated libpangoft2-1.0-0:armhf 226s Re-Instated libpangocairo-1.0-0:armhf 226s Re-Instated libtcl8.6:armhf 226s Re-Instated libjbig0:armhf 226s Re-Instated liblerc4:armhf 226s Re-Instated libsharpyuv0:armhf 226s Re-Instated libwebp7:armhf 226s Re-Instated libtiff6:armhf 226s Re-Instated libxft2:armhf 226s Re-Instated x11-common:armhf 226s Re-Instated libxss1:armhf 226s Re-Instated libtk8.6:armhf 226s Re-Instated libice6:armhf 226s Re-Instated libsm6:armhf 226s Re-Instated libxt6t64:armhf 226s Re-Instated r-base-core:armhf 226s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 226s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated r-cran-permute:armhf 226s Re-Instated r-cran-lattice:armhf 226s Re-Instated r-cran-mass:armhf 226s Re-Instated r-cran-cluster:armhf 226s Re-Instated r-cran-nlme:armhf 226s Re-Instated r-cran-matrix:armhf 226s Re-Instated r-cran-mgcv:armhf 226s Re-Instated r-cran-vegan:armhf 226s Broken q2-diversity-lib:armhf Depends on python3-statsmodels:armhf < none | 0.14.2+dfsg-1 @un uH > 226s Considering python3-statsmodels:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated python3-patsy:armhf 226s Re-Instated python3-statsmodels-lib:armhf 226s Re-Instated python3-statsmodels:armhf 226s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 226s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 226s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 0 226s Re-Instated libtmglib3:armhf 226s Re-Instated liblapacke:armhf 226s Re-Instated libaec0:armhf 226s Re-Instated libsz2:armhf 226s Re-Instated libhdf5-103-1t64:armhf 226s Re-Instated libhdf5-cpp-103-1t64:armhf 226s Re-Instated libssu0:armhf 226s Re-Instated unifrac-tools:armhf 226s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 226s Done 226s Some packages could not be installed. This may mean that you have 226s requested an impossible situation or if you are using the unstable 226s distribution that some required packages have not yet been created 226s or been moved out of Incoming. 226s The following information may help to resolve the situation: 226s 226s The following packages have unmet dependencies: 227s q2-diversity-lib : Depends: q2-emperor (>= 2024.5) but it is not going to be installed 227s Depends: q2-feature-table (>= 2024.5) but it is not going to be installed 227s Depends: python3-unifrac but it is not installable 227s Depends: python3-skbio (>= 0.6) but it is not installable 227s E: Unable to correct problems, you have held broken packages. 227s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from oracular-proposed 233s Reading package lists... 233s Building dependency tree... 233s Reading state information... 234s Starting pkgProblemResolver with broken count: 1 234s Starting 2 pkgProblemResolver with broken count: 1 234s Investigating (0) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 234s Broken q2-diversity-lib:armhf Depends on python3-pandas:armhf < none | 2.2.2+dfsg-4 @un uH > 234s Considering python3-pandas:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated python3-dateutil:armhf 234s Re-Instated libblas3:armhf 234s Re-Instated gcc-14-base:armhf 234s Re-Instated libgfortran5:armhf 234s Re-Instated liblapack3:armhf 234s Re-Instated python3-numpy:armhf 234s Re-Instated python3-tz:armhf 234s Re-Instated python3-pandas-lib:armhf 234s Re-Instated python3-pandas:armhf 234s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 234s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated python3-joblib:armhf 234s Re-Instated python3-decorator:armhf 234s Re-Instated liblbfgsb0:armhf 234s Re-Instated python3-scipy:armhf 234s Re-Instated python3-threadpoolctl:armhf 234s Re-Instated libgomp1:armhf 234s Re-Instated python3-sklearn-lib:armhf 234s Re-Instated python3-sklearn:armhf 234s Broken q2-diversity-lib:armhf Depends on qiime:armhf < none | 2024.5.0-1ubuntu1 @un uH > (>= 2024.5) 234s Considering qiime:armhf 0 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated python3-platformdirs:armhf 234s Re-Instated python3-bibtexparser:armhf 234s Re-Instated python3-dill:armhf 234s Re-Instated libxslt1.1:armhf 234s Re-Instated python3-lxml:armhf 234s Re-Instated python3-filelock:armhf 234s Re-Instated python3-globus-sdk:armhf 234s Re-Instated python3-bcrypt:armhf 234s Re-Instated libsodium23:armhf 234s Re-Instated python3-nacl:armhf 234s Re-Instated python3-paramiko:armhf 234s Re-Instated python3-psutil:armhf 234s Re-Instated python3-setproctitle:armhf 234s Re-Instated python3-tblib:armhf 234s Re-Instated python3-typeguard:armhf 234s Re-Instated python3-py:armhf 234s Re-Instated libnorm1t64:armhf 234s Re-Instated libpgm-5.3-0t64:armhf 234s Re-Instated libzmq5:armhf 234s Re-Instated python3-zmq:armhf 234s Re-Instated fonts-glyphicons-halflings:armhf 234s Re-Instated libjs-bootstrap:armhf 234s Re-Instated javascript-common:armhf 234s Re-Instated libjs-popper.js:armhf 234s Re-Instated node-fortawesome-fontawesome-free:armhf 234s Re-Instated python3-colorama:armhf 234s Re-Instated python3-click:armhf 234s Re-Instated python3-itsdangerous:armhf 234s Re-Instated python3-werkzeug:armhf 234s Re-Instated python3-flask:armhf 234s Re-Instated python3-greenlet:armhf 234s Re-Instated python3-sqlalchemy:armhf 234s Re-Instated python3-flask-sqlalchemy:armhf 234s Re-Instated python3-parsl:armhf 234s Re-Instated python3-tomlkit:armhf 234s Re-Instated python3-tzlocal:armhf 234s Re-Instated python3-networkx:armhf 234s Re-Instated python3-public:armhf 234s Re-Instated python3-flufl.lock:armhf 234s Re-Instated qiime:armhf 234s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 234s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 0 234s Reinst Failed early because of python3-skbio:armhf 234s Reinst Failed because of python3-emperor:armhf 234s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 234s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 0 234s Reinst Failed early because of python3-skbio:armhf 234s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 234s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated zip:armhf 234s Re-Instated unzip:armhf 234s Re-Instated libpaper1:armhf 234s Re-Instated libpaper-utils:armhf 234s Re-Instated xdg-utils:armhf 234s Re-Instated libfreetype6:armhf 234s Re-Instated fonts-dejavu-mono:armhf 234s Re-Instated fonts-dejavu-core:armhf 234s Re-Instated fontconfig-config:armhf 234s Re-Instated libfontconfig1:armhf 234s Re-Instated libpixman-1-0:armhf 234s Re-Instated libxcb-render0:armhf 234s Re-Instated libxcb-shm0:armhf 234s Re-Instated libxrender1:armhf 234s Re-Instated libcairo2:armhf 234s Re-Instated libdeflate0:armhf 234s Re-Instated libjpeg-turbo8:armhf 234s Re-Instated libjpeg8:armhf 234s Re-Instated fontconfig:armhf 234s Re-Instated libgraphite2-3:armhf 234s Re-Instated libharfbuzz0b:armhf 234s Re-Instated libthai-data:armhf 234s Re-Instated libdatrie1:armhf 234s Re-Instated libthai0:armhf 234s Re-Instated libpango-1.0-0:armhf 234s Re-Instated libpangoft2-1.0-0:armhf 234s Re-Instated libpangocairo-1.0-0:armhf 234s Re-Instated libtcl8.6:armhf 234s Re-Instated libjbig0:armhf 234s Re-Instated liblerc4:armhf 234s Re-Instated libsharpyuv0:armhf 234s Re-Instated libwebp7:armhf 234s Re-Instated libtiff6:armhf 234s Re-Instated libxft2:armhf 234s Re-Instated x11-common:armhf 234s Re-Instated libxss1:armhf 234s Re-Instated libtk8.6:armhf 234s Re-Instated libice6:armhf 234s Re-Instated libsm6:armhf 234s Re-Instated libxt6t64:armhf 234s Re-Instated r-base-core:armhf 234s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 234s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated r-cran-permute:armhf 234s Re-Instated r-cran-lattice:armhf 234s Re-Instated r-cran-mass:armhf 234s Re-Instated r-cran-cluster:armhf 234s Re-Instated r-cran-nlme:armhf 234s Re-Instated r-cran-matrix:armhf 234s Re-Instated r-cran-mgcv:armhf 234s Re-Instated r-cran-vegan:armhf 234s Broken q2-diversity-lib:armhf Depends on python3-statsmodels:armhf < none | 0.14.2+dfsg-1 @un uH > 234s Considering python3-statsmodels:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated python3-patsy:armhf 234s Re-Instated python3-statsmodels-lib:armhf 234s Re-Instated python3-statsmodels:armhf 234s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 234s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 234s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 0 234s Re-Instated libtmglib3:armhf 234s Re-Instated liblapacke:armhf 234s Re-Instated libaec0:armhf 234s Re-Instated libsz2:armhf 234s Re-Instated libhdf5-103-1t64:armhf 234s Re-Instated libhdf5-cpp-103-1t64:armhf 234s Re-Instated libssu0:armhf 234s Re-Instated unifrac-tools:armhf 234s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 234s Done 234s Some packages could not be installed. This may mean that you have 234s requested an impossible situation or if you are using the unstable 234s distribution that some required packages have not yet been created 234s or been moved out of Incoming. 234s The following information may help to resolve the situation: 234s 234s The following packages have unmet dependencies: 235s libgcc-s1 : Depends: gcc-14-base (= 14.1.0-1ubuntu1) but 14.1.0-3ubuntu2 is to be installed 235s libstdc++6 : Depends: gcc-14-base (= 14.1.0-1ubuntu1) but 14.1.0-3ubuntu2 is to be installed 235s q2-diversity-lib : Depends: q2-emperor (>= 2024.5) but it is not going to be installed 235s Depends: q2-feature-table (>= 2024.5) but it is not going to be installed 235s Depends: python3-unifrac but it is not installable 235s Depends: python3-skbio (>= 0.6) but it is not installable 235s E: Error, pkgProblemResolver::Resolve generated breaks, this may be caused by held packages. 235s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 237s Reading package lists... 237s Building dependency tree... 237s Reading state information... 238s Starting pkgProblemResolver with broken count: 1 238s Starting 2 pkgProblemResolver with broken count: 1 238s Investigating (0) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 238s Broken q2-diversity-lib:armhf Depends on python3-pandas:armhf < none | 2.2.2+dfsg-4 @un uH > 238s Considering python3-pandas:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated python3-dateutil:armhf 238s Re-Instated libblas3:armhf 238s Re-Instated gcc-14-base:armhf 238s Re-Instated libgfortran5:armhf 238s Re-Instated liblapack3:armhf 238s Re-Instated python3-numpy:armhf 238s Re-Instated python3-tz:armhf 238s Re-Instated python3-pandas-lib:armhf 238s Re-Instated python3-pandas:armhf 238s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 238s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated python3-joblib:armhf 238s Re-Instated python3-decorator:armhf 238s Re-Instated liblbfgsb0:armhf 238s Re-Instated python3-scipy:armhf 238s Re-Instated python3-threadpoolctl:armhf 238s Re-Instated libgomp1:armhf 238s Re-Instated python3-sklearn-lib:armhf 238s Re-Instated python3-sklearn:armhf 238s Broken q2-diversity-lib:armhf Depends on qiime:armhf < none | 2024.5.0-1ubuntu1 @un uH > (>= 2024.5) 238s Considering qiime:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated python3-platformdirs:armhf 238s Re-Instated python3-bibtexparser:armhf 238s Re-Instated python3-dill:armhf 238s Re-Instated libxslt1.1:armhf 238s Re-Instated python3-lxml:armhf 238s Re-Instated python3-filelock:armhf 238s Re-Instated python3-globus-sdk:armhf 238s Re-Instated python3-bcrypt:armhf 238s Re-Instated libsodium23:armhf 238s Re-Instated python3-nacl:armhf 238s Re-Instated python3-paramiko:armhf 238s Re-Instated python3-psutil:armhf 238s Re-Instated python3-setproctitle:armhf 238s Re-Instated python3-tblib:armhf 238s Re-Instated python3-typeguard:armhf 238s Re-Instated python3-py:armhf 238s Re-Instated libnorm1t64:armhf 238s Re-Instated libpgm-5.3-0t64:armhf 238s Re-Instated libzmq5:armhf 238s Re-Instated python3-zmq:armhf 238s Re-Instated fonts-glyphicons-halflings:armhf 238s Re-Instated libjs-bootstrap:armhf 238s Re-Instated javascript-common:armhf 238s Re-Instated libjs-popper.js:armhf 238s Re-Instated node-fortawesome-fontawesome-free:armhf 238s Re-Instated python3-colorama:armhf 238s Re-Instated python3-click:armhf 238s Re-Instated python3-itsdangerous:armhf 238s Re-Instated python3-werkzeug:armhf 238s Re-Instated python3-flask:armhf 238s Re-Instated python3-greenlet:armhf 238s Re-Instated python3-sqlalchemy:armhf 238s Re-Instated python3-flask-sqlalchemy:armhf 238s Re-Instated python3-parsl:armhf 238s Re-Instated python3-tomlkit:armhf 238s Re-Instated python3-tzlocal:armhf 238s Re-Instated python3-networkx:armhf 238s Re-Instated python3-public:armhf 238s Re-Instated python3-flufl.lock:armhf 238s Re-Instated qiime:armhf 238s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 238s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Reinst Failed early because of python3-skbio:armhf 238s Reinst Failed because of python3-emperor:armhf 238s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 238s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Reinst Failed early because of python3-skbio:armhf 238s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 238s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated zip:armhf 238s Re-Instated unzip:armhf 238s Re-Instated libpaper1:armhf 238s Re-Instated libpaper-utils:armhf 238s Re-Instated xdg-utils:armhf 238s Re-Instated libfreetype6:armhf 238s Re-Instated fonts-dejavu-mono:armhf 238s Re-Instated fonts-dejavu-core:armhf 238s Re-Instated fontconfig-config:armhf 238s Re-Instated libfontconfig1:armhf 238s Re-Instated libpixman-1-0:armhf 238s Re-Instated libxcb-render0:armhf 238s Re-Instated libxcb-shm0:armhf 238s Re-Instated libxrender1:armhf 238s Re-Instated libcairo2:armhf 238s Re-Instated libdeflate0:armhf 238s Re-Instated libjpeg-turbo8:armhf 238s Re-Instated libjpeg8:armhf 238s Re-Instated fontconfig:armhf 238s Re-Instated libgraphite2-3:armhf 238s Re-Instated libharfbuzz0b:armhf 238s Re-Instated libthai-data:armhf 238s Re-Instated libdatrie1:armhf 238s Re-Instated libthai0:armhf 238s Re-Instated libpango-1.0-0:armhf 238s Re-Instated libpangoft2-1.0-0:armhf 238s Re-Instated libpangocairo-1.0-0:armhf 238s Re-Instated libtcl8.6:armhf 238s Re-Instated libjbig0:armhf 238s Re-Instated liblerc4:armhf 238s Re-Instated libsharpyuv0:armhf 238s Re-Instated libwebp7:armhf 238s Re-Instated libtiff6:armhf 238s Re-Instated libxft2:armhf 238s Re-Instated x11-common:armhf 238s Re-Instated libxss1:armhf 238s Re-Instated libtk8.6:armhf 238s Re-Instated libice6:armhf 238s Re-Instated libsm6:armhf 238s Re-Instated libxt6t64:armhf 238s Re-Instated r-base-core:armhf 238s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 238s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated r-cran-permute:armhf 238s Re-Instated r-cran-lattice:armhf 238s Re-Instated r-cran-mass:armhf 238s Re-Instated r-cran-cluster:armhf 238s Re-Instated r-cran-nlme:armhf 238s Re-Instated r-cran-matrix:armhf 238s Re-Instated r-cran-mgcv:armhf 238s Re-Instated r-cran-vegan:armhf 238s Broken q2-diversity-lib:armhf Depends on python3-statsmodels:armhf < none | 0.14.2+dfsg-1 @un uH > 238s Considering python3-statsmodels:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated python3-patsy:armhf 238s Re-Instated python3-statsmodels-lib:armhf 238s Re-Instated python3-statsmodels:armhf 238s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 238s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 238s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Re-Instated libtmglib3:armhf 238s Re-Instated liblapacke:armhf 238s Re-Instated libaec0:armhf 238s Re-Instated libsz2:armhf 238s Re-Instated libhdf5-103-1t64:armhf 238s Re-Instated libhdf5-cpp-103-1t64:armhf 238s Re-Instated libssu0:armhf 238s Re-Instated unifrac-tools:armhf 238s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 238s Investigating (0) libgcc-s1:armhf < 14.1.0-1ubuntu1 | 14.1.0-3ubuntu2 @ii umH Ib > 238s Broken libgcc-s1:armhf Depends on gcc-14-base:armhf < 14.1.0-1ubuntu1 -> 14.1.0-3ubuntu2 @ii umU > (= 14.1.0-1ubuntu1) 238s Considering gcc-14-base:armhf 144 as a solution to libgcc-s1:armhf 5679 238s Added gcc-14-base:armhf to the remove list 238s Fixing libgcc-s1:armhf via keep of gcc-14-base:armhf 238s Investigating (0) libgomp1:armhf < none -> 14.1.0-3ubuntu2 @un uN Ib > 238s Broken libgomp1:armhf Depends on gcc-14-base:armhf < 14.1.0-1ubuntu1 | 14.1.0-3ubuntu2 @ii umH > (= 14.1.0-3ubuntu2) 238s Considering gcc-14-base:armhf 144 as a solution to libgomp1:armhf 0 238s Holding Back libgomp1:armhf rather than change gcc-14-base:armhf 238s Investigating (0) python3-sklearn-lib:armhf < none -> 1.4.2+dfsg-3 @un uN Ib > 238s Broken python3-sklearn-lib:armhf Depends on libgomp1:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 4.9) 238s Considering libgomp1:armhf 0 as a solution to python3-sklearn-lib:armhf 0 238s Holding Back python3-sklearn-lib:armhf rather than change libgomp1:armhf 238s Investigating (0) libgfortran5:armhf < none -> 14.1.0-3ubuntu2 @un uN Ib > 238s Broken libgfortran5:armhf Depends on gcc-14-base:armhf < 14.1.0-1ubuntu1 | 14.1.0-3ubuntu2 @ii umH > (= 14.1.0-3ubuntu2) 238s Considering gcc-14-base:armhf 144 as a solution to libgfortran5:armhf 0 238s Holding Back libgfortran5:armhf rather than change gcc-14-base:armhf 238s Investigating (1) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 238s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 238s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 238s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 238s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 238s Investigating (1) r-cran-vegan:armhf < none -> 2.6-6.1+dfsg-1 @un uN Ib > 238s Broken r-cran-vegan:armhf Depends on libgfortran5:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 8) 238s Considering libgfortran5:armhf 0 as a solution to r-cran-vegan:armhf 1 238s Holding Back r-cran-vegan:armhf rather than change libgfortran5:armhf 238s Investigating (1) python3-sklearn:armhf < none -> 1.4.2+dfsg-3 @un uN Ib > 238s Broken python3-sklearn:armhf Depends on python3-sklearn-lib:armhf < none | 1.4.2+dfsg-3 @un uH > (>= 1.4.2+dfsg-3) 238s Considering python3-sklearn-lib:armhf 0 as a solution to python3-sklearn:armhf 1 238s Holding Back python3-sklearn:armhf rather than change python3-sklearn-lib:armhf 238s Investigating (1) r-base-core:armhf < none -> 4.4.1-1 @un uN Ib > 238s Broken r-base-core:armhf Depends on libgomp1:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 4.9) 238s Considering libgomp1:armhf 0 as a solution to r-base-core:armhf 1 238s Holding Back r-base-core:armhf rather than change libgomp1:armhf 238s Investigating (1) unifrac-tools:armhf < none -> 1.4-3build2 @un uN Ib > 238s Broken unifrac-tools:armhf Depends on libgomp1:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 6) 238s Considering libgomp1:armhf 0 as a solution to unifrac-tools:armhf 1 238s Holding Back unifrac-tools:armhf rather than change libgomp1:armhf 238s Investigating (1) r-cran-cluster:armhf < none -> 2.1.6-1build1 @un uN Ib > 238s Broken r-cran-cluster:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-cluster:armhf 0 238s Holding Back r-cran-cluster:armhf rather than change r-api-4.0:armhf 238s Investigating (1) r-cran-mass:armhf < none -> 7.3-61-1 @un uN Ib > 238s Broken r-cran-mass:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-mass:armhf 0 238s Holding Back r-cran-mass:armhf rather than change r-api-4.0:armhf 238s Investigating (1) r-cran-mgcv:armhf < none -> 1.9-1-1 @un uN Ib > 238s Broken r-cran-mgcv:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-mgcv:armhf 0 238s Holding Back r-cran-mgcv:armhf rather than change r-api-4.0:armhf 238s Investigating (1) r-cran-permute:armhf < none -> 0.9-7-1 @un uN Ib > 238s Broken r-cran-permute:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > (>= 4.1.2-1ubuntu2) 238s Considering r-base-core:armhf 1 as a solution to r-cran-permute:armhf 0 238s Holding Back r-cran-permute:armhf rather than change r-base-core:armhf 238s Investigating (1) libssu0:armhf < none -> 1.4-3build2 @un uN Ib > 238s Broken libssu0:armhf Depends on libgomp1:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 6) 238s Considering libgomp1:armhf 0 as a solution to libssu0:armhf 0 238s Holding Back libssu0:armhf rather than change libgomp1:armhf 238s Investigating (1) liblapack3:armhf < none -> 3.12.0-3build1 @un uN Ib > 238s Broken liblapack3:armhf Depends on libgfortran5:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 8) 238s Considering libgfortran5:armhf 0 as a solution to liblapack3:armhf 0 238s Holding Back liblapack3:armhf rather than change libgfortran5:armhf 238s Investigating (1) r-cran-nlme:armhf < none -> 3.1.165-1 @un uN Ib > 238s Broken r-cran-nlme:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-nlme:armhf 0 238s Holding Back r-cran-nlme:armhf rather than change r-api-4.0:armhf 238s Investigating (1) liblapacke:armhf < none -> 3.12.0-3build1 @un uN Ib > 238s Broken liblapacke:armhf Depends on liblapack3:armhf < none | 3.12.0-3build1 @un uH > 238s Considering liblapack3:armhf 0 as a solution to liblapacke:armhf 0 238s Holding Back liblapacke:armhf rather than change liblapack3:armhf 238s Broken liblapacke:armhf Depends on liblapack.so.3:armhf < none @un H > 238s Considering libopenblas0-serial:armhf 0 as a solution to liblapacke:armhf 0 238s Holding Back liblapacke:armhf rather than change liblapack.so.3:armhf 238s Or group keep for liblapacke:armhf 238s Investigating (1) liblbfgsb0:armhf < none -> 3.0+dfsg.4-1build1 @un uN Ib > 238s Broken liblbfgsb0:armhf Depends on libgfortran5:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 8) 238s Considering libgfortran5:armhf 0 as a solution to liblbfgsb0:armhf 0 238s Holding Back liblbfgsb0:armhf rather than change libgfortran5:armhf 238s Investigating (1) r-cran-lattice:armhf < none -> 0.22-6-1 @un uN Ib > 238s Broken r-cran-lattice:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-lattice:armhf 0 238s Holding Back r-cran-lattice:armhf rather than change r-api-4.0:armhf 238s Investigating (1) r-cran-matrix:armhf < none -> 1.7-0-3 @un uN Ib > 238s Broken r-cran-matrix:armhf Depends on liblapack3:armhf < none | 3.12.0-3build1 @un uH > 238s Considering liblapack3:armhf 0 as a solution to r-cran-matrix:armhf 0 238s Holding Back r-cran-matrix:armhf rather than change liblapack3:armhf 238s Broken r-cran-matrix:armhf Depends on liblapack.so.3:armhf < none @un H > 238s Considering libopenblas0-serial:armhf 0 as a solution to r-cran-matrix:armhf 0 238s Holding Back r-cran-matrix:armhf rather than change liblapack.so.3:armhf 238s Or group keep for r-cran-matrix:armhf 238s Broken r-cran-matrix:armhf Depends on r-api-4.0:armhf < none @un H > 238s Considering r-base-core:armhf 1 as a solution to r-cran-matrix:armhf 0 238s Holding Back r-cran-matrix:armhf rather than change r-api-4.0:armhf 238s Investigating (1) python3-scipy:armhf < none -> 1.12.0-2 @un uN Ib > 238s Broken python3-scipy:armhf Depends on libgfortran5:armhf < none | 14.1.0-3ubuntu2 @un uH > (>= 8) 238s Considering libgfortran5:armhf 0 as a solution to python3-scipy:armhf 0 238s Holding Back python3-scipy:armhf rather than change libgfortran5:armhf 238s Investigating (2) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 238s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 238s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 238s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 238s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 238s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 238s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 238s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 238s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 238s Investigating (2) python3-statsmodels:armhf < none -> 0.14.2+dfsg-1 @un uN Ib > 238s Broken python3-statsmodels:armhf Depends on python3-scipy:armhf < none | 1.12.0-2 @un uH > (>= 1.9.3~) 238s Considering python3-scipy:armhf 0 as a solution to python3-statsmodels:armhf 1 238s Holding Back python3-statsmodels:armhf rather than change python3-scipy:armhf 238s Investigating (2) libtmglib3:armhf < none -> 3.12.0-3build1 @un uN Ib > 238s Broken libtmglib3:armhf Depends on liblapack3:armhf < none | 3.12.0-3build1 @un uH > 238s Considering liblapack3:armhf 0 as a solution to libtmglib3:armhf 0 238s Holding Back libtmglib3:armhf rather than change liblapack3:armhf 238s Broken libtmglib3:armhf Depends on liblapack.so.3:armhf < none @un H > 238s Considering libopenblas0-serial:armhf 0 as a solution to libtmglib3:armhf 0 238s Holding Back libtmglib3:armhf rather than change liblapack.so.3:armhf 238s Or group keep for libtmglib3:armhf 238s Investigating (2) python3-numpy:armhf < none -> 1:1.26.4+ds-10 @un uN Ib > 238s Broken python3-numpy:armhf Depends on liblapack3:armhf < none | 3.12.0-3build1 @un uH > 238s Considering liblapack3:armhf 0 as a solution to python3-numpy:armhf 0 238s Holding Back python3-numpy:armhf rather than change liblapack3:armhf 238s Broken python3-numpy:armhf Depends on liblapack.so.3:armhf < none @un H > 238s Considering libopenblas0-serial:armhf 0 as a solution to python3-numpy:armhf 0 238s Holding Back python3-numpy:armhf rather than change liblapack.so.3:armhf 238s Or group keep for python3-numpy:armhf 238s Investigating (2) python3-statsmodels-lib:armhf < none -> 0.14.2+dfsg-1 @un uN Ib > 238s Broken python3-statsmodels-lib:armhf Depends on python3-numpy:armhf < none | 1:1.26.4+ds-10 @un uH > (>= 1:1.25.0) 238s Considering python3-numpy:armhf 0 as a solution to python3-statsmodels-lib:armhf 0 238s Holding Back python3-statsmodels-lib:armhf rather than change python3-numpy:armhf 238s Investigating (2) python3-pandas-lib:armhf < none -> 2.2.2+dfsg-4 @un uN Ib > 238s Broken python3-pandas-lib:armhf Depends on python3-numpy:armhf < none | 1:1.26.4+ds-10 @un uH > (>= 1:1.25.0) 238s Considering python3-numpy:armhf 0 as a solution to python3-pandas-lib:armhf 0 238s Holding Back python3-pandas-lib:armhf rather than change python3-numpy:armhf 238s Investigating (2) python3-patsy:armhf < none -> 0.5.6-1 @un uN Ib > 238s Broken python3-patsy:armhf Depends on python3-numpy:armhf < none | 1:1.26.4+ds-10 @un uH > 238s Considering python3-numpy:armhf 0 as a solution to python3-patsy:armhf 0 238s Holding Back python3-patsy:armhf rather than change python3-numpy:armhf 238s Investigating (3) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 238s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 238s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 238s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 238s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 238s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 238s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-statsmodels:armhf < none | 0.14.2+dfsg-1 @un uH > 238s Considering python3-statsmodels:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 238s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 238s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 238s Investigating (3) python3-pandas:armhf < none -> 2.2.2+dfsg-4 @un uN Ib > 238s Broken python3-pandas:armhf Depends on python3-numpy:armhf < none | 1:1.26.4+ds-10 @un uH > 238s Considering python3-numpy:armhf 0 as a solution to python3-pandas:armhf 1 238s Holding Back python3-pandas:armhf rather than change python3-numpy:armhf 238s Investigating (3) qiime:armhf < none -> 2024.5.0-1ubuntu1 @un uN Ib > 238s Broken qiime:armhf Depends on python3-pandas:armhf < none | 2.2.2+dfsg-4 @un uH > 238s Considering python3-pandas:armhf 1 as a solution to qiime:armhf 0 238s Holding Back qiime:armhf rather than change python3-pandas:armhf 238s Investigating (4) q2-diversity-lib:armhf < none -> 2024.5.0-1ubuntu1 @un puN Ib > 238s Broken q2-diversity-lib:armhf Depends on python3-pandas:armhf < none | 2.2.2+dfsg-4 @un uH > 238s Considering python3-pandas:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Considering python3-pandas:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-sklearn:armhf < none | 1.4.2+dfsg-3 @un uH > 238s Considering python3-sklearn:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on qiime:armhf < none | 2024.5.0-1ubuntu1 @un uH > (>= 2024.5) 238s Considering qiime:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-emperor:armhf < none | 2024.5.0-2 @un uH > (>= 2024.5) 238s Considering q2-emperor:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on q2-feature-table:armhf < none | 2024.5.0+dfsg-1ubuntu1 @un uH > (>= 2024.5) 238s Considering q2-feature-table:armhf 0 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-base-core:armhf < none | 4.4.1-1 @un uH > 238s Considering r-base-core:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on r-cran-vegan:armhf < none | 2.6-6.1+dfsg-1 @un uH > 238s Considering r-cran-vegan:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-statsmodels:armhf < none | 0.14.2+dfsg-1 @un uH > 238s Considering python3-statsmodels:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-unifrac:armhf < none @un H > 238s Broken q2-diversity-lib:armhf Depends on unifrac-tools:armhf < none | 1.4-3build2 @un uH > 238s Considering unifrac-tools:armhf 1 as a solution to q2-diversity-lib:armhf 9999 238s Broken q2-diversity-lib:armhf Depends on python3-skbio:armhf < none @un H > (>= 0.6) 238s Done 238s Some packages could not be installed. This may mean that you have 238s requested an impossible situation or if you are using the unstable 238s distribution that some required packages have not yet been created 238s or been moved out of Incoming. 238s The following information may help to resolve the situation: 238s 238s The following packages have unmet dependencies: 238s q2-diversity-lib : Depends: python3-pandas but it is not going to be installed 238s Depends: python3-sklearn but it is not going to be installed 238s Depends: qiime (>= 2024.5) but it is not going to be installed 238s Depends: q2-emperor (>= 2024.5) but it is not going to be installed 238s Depends: q2-feature-table (>= 2024.5) but it is not going to be installed 238s Depends: r-base-core but it is not going to be installed 238s Depends: r-cran-vegan but it is not going to be installed 238s Depends: python3-statsmodels but it is not going to be installed 238s Depends: python3-unifrac but it is not installable 238s Depends: unifrac-tools but it is not going to be installed 238s Depends: python3-skbio (>= 0.6) but it is not installable 238s E: Unable to correct problems, you have held broken packages. 238s autopkgtest [01:29:35]: @@@@@@@@@@@@@@@@@@@@ summary 238s run-unit-test SKIP installation fails and skip-not-installable set 238s run-unit-test SKIP installation fails and skip-not-installable set