0s autopkgtest [12:42:43]: starting date and time: 2024-07-22 12:42:43+0000 0s autopkgtest [12:42:43]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [12:42:43]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.mko0zw8k/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:python3-defaults,src:python3-stdlib-extensions --apt-upgrade python-griddataformats --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=python3-defaults/3.12.4-1 python3-stdlib-extensions/3.12.4-2' -- lxd -r lxd-armhf-10.145.243.242 lxd-armhf-10.145.243.242:autopkgtest/ubuntu/oracular/armhf 63s autopkgtest [12:43:46]: testbed dpkg architecture: armhf 66s autopkgtest [12:43:49]: testbed apt version: 2.9.6 66s autopkgtest [12:43:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 96s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 101s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [58.8 kB] 102s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [398 kB] 102s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4220 B] 102s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 102s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [87.6 kB] 102s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf c-n-f Metadata [1428 B] 102s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf Packages [1368 B] 103s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf c-n-f Metadata [120 B] 103s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [357 kB] 103s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf c-n-f Metadata [6916 B] 103s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [2072 B] 103s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf c-n-f Metadata [120 B] 110s Fetched 1052 kB in 18s (58.7 kB/s) 110s Reading package lists... 142s tee: /proc/self/fd/2: Permission denied 177s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 177s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 177s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 177s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 180s Reading package lists... 180s Reading package lists... 180s Building dependency tree... 180s Reading state information... 181s Calculating upgrade... 181s The following packages will be upgraded: 181s cloud-init cpio dash gcc-14-base gdisk krb5-locales libbpf1 libgcc-s1 181s libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libpython3-stdlib 181s libstdc++6 libudisks2-0 libxml2 netcat-openbsd python3 python3-gdbm 181s python3-minimal udisks2 181s 21 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 181s Need to get 3595 kB of archives. 181s After this operation, 69.6 kB disk space will be freed. 181s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf dash armhf 0.5.12-9ubuntu1 [81.3 kB] 181s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf python3-minimal armhf 3.12.4-1 [27.1 kB] 181s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf python3 armhf 3.12.4-1 [24.0 kB] 181s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf libpython3-stdlib armhf 3.12.4-1 [9824 B] 181s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-14-base armhf 14.1.0-5ubuntu1 [49.8 kB] 181s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++6 armhf 14.1.0-5ubuntu1 [711 kB] 182s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-s1 armhf 14.1.0-5ubuntu1 [40.8 kB] 182s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf krb5-locales all 1.21.3-3 [14.3 kB] 182s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf libbpf1 armhf 1:1.4.5-1 [151 kB] 182s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [120 kB] 182s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf libkrb5-3 armhf 1.21.3-3 [313 kB] 182s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf libkrb5support0 armhf 1.21.3-3 [31.2 kB] 182s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf libk5crypto3 armhf 1.21.3-3 [78.6 kB] 182s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf libxml2 armhf 2.12.7+dfsg-3 [560 kB] 182s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf netcat-openbsd armhf 1.226-1.1 [42.2 kB] 182s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf cpio armhf 2.15+dfsg-1ubuntu3 [82.6 kB] 182s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf python3-gdbm armhf 3.12.4-2 [16.9 kB] 182s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf udisks2 armhf 2.10.1-9ubuntu1 [277 kB] 182s Get:19 http://ftpmaster.internal/ubuntu oracular/main armhf libudisks2-0 armhf 2.10.1-9ubuntu1 [142 kB] 182s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf cloud-init all 24.3~1g6e4153b3-0ubuntu1 [592 kB] 182s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf gdisk armhf 1.0.10-2 [229 kB] 182s Preconfiguring packages ... 182s Fetched 3595 kB in 1s (4870 kB/s) 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 182s Preparing to unpack .../dash_0.5.12-9ubuntu1_armhf.deb ... 182s Unpacking dash (0.5.12-9ubuntu1) over (0.5.12-6ubuntu5) ... 183s Setting up dash (0.5.12-9ubuntu1) ... 183s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 183s Preparing to unpack .../python3-minimal_3.12.4-1_armhf.deb ... 183s Unpacking python3-minimal (3.12.4-1) over (3.12.3-0ubuntu1) ... 183s Setting up python3-minimal (3.12.4-1) ... 183s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 183s Preparing to unpack .../python3_3.12.4-1_armhf.deb ... 183s Unpacking python3 (3.12.4-1) over (3.12.3-0ubuntu1) ... 183s Preparing to unpack .../libpython3-stdlib_3.12.4-1_armhf.deb ... 183s Unpacking libpython3-stdlib:armhf (3.12.4-1) over (3.12.3-0ubuntu1) ... 183s Preparing to unpack .../gcc-14-base_14.1.0-5ubuntu1_armhf.deb ... 183s Unpacking gcc-14-base:armhf (14.1.0-5ubuntu1) over (14.1.0-4ubuntu2) ... 183s Setting up gcc-14-base:armhf (14.1.0-5ubuntu1) ... 183s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 183s Preparing to unpack .../libstdc++6_14.1.0-5ubuntu1_armhf.deb ... 183s Unpacking libstdc++6:armhf (14.1.0-5ubuntu1) over (14.1.0-4ubuntu2) ... 183s Setting up libstdc++6:armhf (14.1.0-5ubuntu1) ... 183s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 183s Preparing to unpack .../libgcc-s1_14.1.0-5ubuntu1_armhf.deb ... 183s Unpacking libgcc-s1:armhf (14.1.0-5ubuntu1) over (14.1.0-4ubuntu2) ... 183s Setting up libgcc-s1:armhf (14.1.0-5ubuntu1) ... 184s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58436 files and directories currently installed.) 184s Preparing to unpack .../00-krb5-locales_1.21.3-3_all.deb ... 184s Unpacking krb5-locales (1.21.3-3) over (1.20.1-6ubuntu2) ... 184s Preparing to unpack .../01-libbpf1_1%3a1.4.5-1_armhf.deb ... 184s Unpacking libbpf1:armhf (1:1.4.5-1) over (1:1.4.3-1) ... 184s Preparing to unpack .../02-libgssapi-krb5-2_1.21.3-3_armhf.deb ... 184s Unpacking libgssapi-krb5-2:armhf (1.21.3-3) over (1.20.1-6ubuntu2) ... 184s Preparing to unpack .../03-libkrb5-3_1.21.3-3_armhf.deb ... 184s Unpacking libkrb5-3:armhf (1.21.3-3) over (1.20.1-6ubuntu2) ... 184s Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... 184s Unpacking libkrb5support0:armhf (1.21.3-3) over (1.20.1-6ubuntu2) ... 184s Preparing to unpack .../05-libk5crypto3_1.21.3-3_armhf.deb ... 184s Unpacking libk5crypto3:armhf (1.21.3-3) over (1.20.1-6ubuntu2) ... 184s Preparing to unpack .../06-libxml2_2.12.7+dfsg-3_armhf.deb ... 184s Unpacking libxml2:armhf (2.12.7+dfsg-3) over (2.9.14+dfsg-1.3ubuntu3) ... 184s Preparing to unpack .../07-netcat-openbsd_1.226-1.1_armhf.deb ... 184s Unpacking netcat-openbsd (1.226-1.1) over (1.226-1ubuntu2) ... 184s Preparing to unpack .../08-cpio_2.15+dfsg-1ubuntu3_armhf.deb ... 184s Unpacking cpio (2.15+dfsg-1ubuntu3) over (2.15+dfsg-1ubuntu2) ... 184s Preparing to unpack .../09-python3-gdbm_3.12.4-2_armhf.deb ... 184s Unpacking python3-gdbm:armhf (3.12.4-2) over (3.12.3-0ubuntu1) ... 184s Preparing to unpack .../10-udisks2_2.10.1-9ubuntu1_armhf.deb ... 184s Unpacking udisks2 (2.10.1-9ubuntu1) over (2.10.1-9) ... 184s Preparing to unpack .../11-libudisks2-0_2.10.1-9ubuntu1_armhf.deb ... 184s Unpacking libudisks2-0:armhf (2.10.1-9ubuntu1) over (2.10.1-9) ... 184s Preparing to unpack .../12-cloud-init_24.3~1g6e4153b3-0ubuntu1_all.deb ... 185s Unpacking cloud-init (24.3~1g6e4153b3-0ubuntu1) over (24.2-0ubuntu1) ... 185s Preparing to unpack .../13-gdisk_1.0.10-2_armhf.deb ... 185s Unpacking gdisk (1.0.10-2) over (1.0.10-1build1) ... 185s Setting up cpio (2.15+dfsg-1ubuntu3) ... 185s Setting up netcat-openbsd (1.226-1.1) ... 185s Setting up krb5-locales (1.21.3-3) ... 185s Setting up libkrb5support0:armhf (1.21.3-3) ... 185s Setting up gdisk (1.0.10-2) ... 185s Setting up libk5crypto3:armhf (1.21.3-3) ... 185s Setting up libkrb5-3:armhf (1.21.3-3) ... 185s Setting up libxml2:armhf (2.12.7+dfsg-3) ... 185s Setting up libbpf1:armhf (1:1.4.5-1) ... 185s Setting up libudisks2-0:armhf (2.10.1-9ubuntu1) ... 185s Setting up libpython3-stdlib:armhf (3.12.4-1) ... 185s Setting up udisks2 (2.10.1-9ubuntu1) ... 185s vda: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/uevent': Permission denied 185s vda1: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda1/uevent': Permission denied 185s vda15: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda15/uevent': Permission denied 185s vda2: Failed to write 'change' to '/sys/devices/pci0000:00/0000:00:01.3/0000:04:00.0/virtio2/block/vda/vda2/uevent': Permission denied 185s loop0: Failed to write 'change' to '/sys/devices/virtual/block/loop0/uevent': Permission denied 185s loop1: Failed to write 'change' to '/sys/devices/virtual/block/loop1/uevent': Permission denied 185s loop2: Failed to write 'change' to '/sys/devices/virtual/block/loop2/uevent': Permission denied 185s loop3: Failed to write 'change' to '/sys/devices/virtual/block/loop3/uevent': Permission denied 185s loop4: Failed to write 'change' to '/sys/devices/virtual/block/loop4/uevent': Permission denied 185s loop5: Failed to write 'change' to '/sys/devices/virtual/block/loop5/uevent': Permission denied 185s loop6: Failed to write 'change' to '/sys/devices/virtual/block/loop6/uevent': Permission denied 185s loop7: Failed to write 'change' to '/sys/devices/virtual/block/loop7/uevent': Permission denied 186s Setting up python3 (3.12.4-1) ... 186s Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... 186s Setting up cloud-init (24.3~1g6e4153b3-0ubuntu1) ... 188s Setting up python3-gdbm:armhf (3.12.4-2) ... 188s Processing triggers for rsyslog (8.2312.0-3ubuntu9) ... 188s Processing triggers for man-db (2.12.1-2) ... 189s Processing triggers for dbus (1.14.10-4ubuntu4) ... 189s Processing triggers for debianutils (5.20) ... 189s Processing triggers for libc-bin (2.39-0ubuntu9) ... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 191s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 193s autopkgtest [12:45:56]: rebooting testbed after setup commands that affected boot 267s autopkgtest [12:47:10]: testbed running kernel: Linux 6.5.0-41-generic #41~22.04.2-Ubuntu SMP PREEMPT_DYNAMIC Mon Jun 3 16:28:24 UTC 2 303s autopkgtest [12:47:46]: @@@@@@@@@@@@@@@@@@@@ apt-source python-griddataformats 314s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (dsc) [2267 B] 314s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (tar) [2159 kB] 314s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (diff) [3172 B] 314s gpgv: Signature made Thu Jan 18 12:51:40 2024 UTC 314s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 314s gpgv: Can't check signature: No public key 314s dpkg-source: warning: cannot verify inline signature for ./python-griddataformats_1.0.2-1.dsc: no acceptable signature found 314s autopkgtest [12:47:57]: testing package python-griddataformats version 1.0.2-1 316s autopkgtest [12:47:59]: build not needed 318s autopkgtest [12:48:01]: test command1: preparing testbed 328s Reading package lists... 329s Building dependency tree... 329s Reading state information... 329s Starting pkgProblemResolver with broken count: 0 329s Starting 2 pkgProblemResolver with broken count: 0 329s Done 330s The following additional packages will be installed: 330s autoconf automake autopoint autotools-dev build-essential cpp cpp-13 330s cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper debugedit 330s dh-autoreconf dh-python dh-strip-nondeterminism dwz fonts-font-awesome 330s fonts-lato g++ g++-13 g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc 330s gcc-13 gcc-13-arm-linux-gnueabihf gcc-13-base gcc-arm-linux-gnueabihf 330s gettext intltool-debian libarchive-zip-perl libasan8 libatomic1 libblas3 330s libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libdebhelper-perl libdw1t64 330s libfile-stripnondeterminism-perl libgcc-13-dev libgfortran5 libgomp1 330s libisl23 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 330s libmpc3 libstdc++-13-dev libtool libubsan1 linux-libc-dev m4 po-debconf 330s python3-all python3-decorator python3-griddataformats python3-iniconfig 330s python3-mrcfile python3-numpy python3-packaging python3-pluggy 330s python3-pytest python3-scipy rpcsvc-proto sphinx-rtd-theme-common 330s Suggested packages: 330s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-13-locales 330s cpp-13-doc dh-make flit python3-build python3-installer python3-wheel 330s gcc-13-doc gcc-multilib manpages-dev flex bison gdb gcc-doc 330s gdb-arm-linux-gnueabihf gettext-doc libasprintf-dev libgettextpo-dev 330s glibc-doc libstdc++-13-doc libtool-doc gfortran | fortran95-compiler gcj-jdk 330s m4-doc libmail-box-perl gfortran python-numpy-doc python3-dev 330s python-scipy-doc 330s Recommended packages: 330s manpages manpages-dev libc-devtools libarchive-cpio-perl javascript-common 330s libltdl-dev libmail-sendmail-perl python3-pil 330s The following NEW packages will be installed: 330s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 330s cpp cpp-13 cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf debhelper 330s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz 330s fonts-font-awesome fonts-lato g++ g++-13 g++-13-arm-linux-gnueabihf 330s g++-arm-linux-gnueabihf gcc gcc-13 gcc-13-arm-linux-gnueabihf gcc-13-base 330s gcc-arm-linux-gnueabihf gettext intltool-debian libarchive-zip-perl libasan8 330s libatomic1 libblas3 libc-dev-bin libc6-dev libcc1-0 libcrypt-dev 330s libdebhelper-perl libdw1t64 libfile-stripnondeterminism-perl libgcc-13-dev 330s libgfortran5 libgomp1 libisl23 libjs-jquery libjs-sphinxdoc libjs-underscore 330s liblapack3 liblbfgsb0 libmpc3 libstdc++-13-dev libtool libubsan1 330s linux-libc-dev m4 po-debconf python3-all python3-decorator 330s python3-griddataformats python3-iniconfig python3-mrcfile python3-numpy 330s python3-packaging python3-pluggy python3-pytest python3-scipy rpcsvc-proto 330s sphinx-rtd-theme-common 330s 0 upgraded, 68 newly installed, 0 to remove and 0 not upgraded. 330s Need to get 80.1 MB/80.1 MB of archives. 330s After this operation, 248 MB of additional disk space will be used. 330s Get:1 /tmp/autopkgtest.GpOyjY/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [804 B] 331s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-lato all 2.015-1 [2781 kB] 332s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf m4 armhf 1.4.19-4build1 [235 kB] 332s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf autoconf all 2.71-3 [339 kB] 332s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf autotools-dev all 20220109.1 [44.9 kB] 332s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] 332s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf autopoint all 0.22.5-1 [616 kB] 332s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf libc-dev-bin armhf 2.39-0ubuntu9 [19.1 kB] 332s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf linux-libc-dev armhf 6.8.0-31.31 [1557 kB] 332s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] 332s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] 332s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf libc6-dev armhf 2.39-0ubuntu9 [1351 kB] 333s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13-base armhf 13.3.0-3ubuntu1 [50.8 kB] 333s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf libisl23 armhf 0.26-3build1 [544 kB] 333s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf libmpc3 armhf 1.3.1-1build1 [46.7 kB] 333s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-13-arm-linux-gnueabihf armhf 13.3.0-3ubuntu1 [8248 kB] 333s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-13 armhf 13.3.0-3ubuntu1 [1034 B] 333s Get:18 http://ftpmaster.internal/ubuntu oracular/main armhf cpp-arm-linux-gnueabihf armhf 4:13.3.0-2ubuntu2 [5410 B] 333s Get:19 http://ftpmaster.internal/ubuntu oracular/main armhf cpp armhf 4:13.3.0-2ubuntu2 [22.5 kB] 333s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf libcc1-0 armhf 14.1.0-5ubuntu1 [43.3 kB] 333s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf libgomp1 armhf 14.1.0-5ubuntu1 [125 kB] 333s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf libatomic1 armhf 14.1.0-5ubuntu1 [7850 B] 333s Get:23 http://ftpmaster.internal/ubuntu oracular/main armhf libasan8 armhf 14.1.0-5ubuntu1 [2901 kB] 333s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libubsan1 armhf 14.1.0-5ubuntu1 [1149 kB] 334s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf libgcc-13-dev armhf 13.3.0-3ubuntu1 [897 kB] 334s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13-arm-linux-gnueabihf armhf 13.3.0-3ubuntu1 [16.1 MB] 334s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-13 armhf 13.3.0-3ubuntu1 [462 kB] 334s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf gcc-arm-linux-gnueabihf armhf 4:13.3.0-2ubuntu2 [1216 B] 334s Get:29 http://ftpmaster.internal/ubuntu oracular/main armhf gcc armhf 4:13.3.0-2ubuntu2 [5016 B] 334s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf libstdc++-13-dev armhf 13.3.0-3ubuntu1 [2505 kB] 334s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf g++-13-arm-linux-gnueabihf armhf 13.3.0-3ubuntu1 [9427 kB] 335s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf g++-13 armhf 13.3.0-3ubuntu1 [16.0 kB] 335s Get:33 http://ftpmaster.internal/ubuntu oracular/main armhf g++-arm-linux-gnueabihf armhf 4:13.3.0-2ubuntu2 [968 B] 335s Get:34 http://ftpmaster.internal/ubuntu oracular/main armhf g++ armhf 4:13.3.0-2ubuntu2 [1086 B] 335s Get:35 http://ftpmaster.internal/ubuntu oracular/main armhf build-essential armhf 12.10ubuntu1 [4928 B] 335s Get:36 http://ftpmaster.internal/ubuntu oracular/main armhf libdebhelper-perl all 13.16ubuntu2 [92.9 kB] 335s Get:37 http://ftpmaster.internal/ubuntu oracular/main armhf libtool all 2.4.7-7build1 [166 kB] 335s Get:38 http://ftpmaster.internal/ubuntu oracular/main armhf dh-autoreconf all 20 [16.1 kB] 335s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] 335s Get:40 http://ftpmaster.internal/ubuntu oracular/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 335s Get:41 http://ftpmaster.internal/ubuntu oracular/main armhf dh-strip-nondeterminism all 1.14.0-1 [5058 B] 335s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf libdw1t64 armhf 0.191-2 [237 kB] 335s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf debugedit armhf 1:5.0-6 [42.3 kB] 335s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf dwz armhf 0.15-1build6 [116 kB] 335s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf gettext armhf 0.22.5-1 [989 kB] 335s Get:46 http://ftpmaster.internal/ubuntu oracular/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] 335s Get:47 http://ftpmaster.internal/ubuntu oracular/main armhf po-debconf all 1.0.21+nmu1 [233 kB] 335s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf debhelper all 13.16ubuntu2 [869 kB] 335s Get:49 http://ftpmaster.internal/ubuntu oracular/universe armhf dh-python all 6.20240603 [112 kB] 335s Get:50 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 335s Get:51 http://ftpmaster.internal/ubuntu oracular/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 335s Get:52 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran5 armhf 14.1.0-5ubuntu1 [311 kB] 335s Get:53 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 335s Get:54 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 335s Get:55 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-sphinxdoc all 7.3.7-3 [154 kB] 335s Get:56 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 335s Get:57 http://ftpmaster.internal/ubuntu oracular/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 335s Get:58 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf python3-all armhf 3.12.4-1 [882 B] 335s Get:59 http://ftpmaster.internal/ubuntu oracular/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 335s Get:60 http://ftpmaster.internal/ubuntu oracular/main armhf python3-numpy armhf 1:1.26.4+ds-10 [3541 kB] 335s Get:61 http://ftpmaster.internal/ubuntu oracular/main armhf sphinx-rtd-theme-common all 2.0.0+dfsg-2 [1012 kB] 335s Get:62 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-mrcfile all 1.4.3-3 [110 kB] 335s Get:63 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-scipy armhf 1.12.0-2 [16.1 MB] 336s Get:64 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-griddataformats all 1.0.2-1 [2101 kB] 336s Get:65 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 336s Get:66 http://ftpmaster.internal/ubuntu oracular/main armhf python3-packaging all 24.1-1 [41.4 kB] 336s Get:67 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 336s Get:68 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pytest all 7.4.4-1 [305 kB] 336s Fetched 80.1 MB in 5s (14.7 MB/s) 336s Selecting previously unselected package fonts-lato. 336s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58440 files and directories currently installed.) 336s Preparing to unpack .../00-fonts-lato_2.015-1_all.deb ... 336s Unpacking fonts-lato (2.015-1) ... 337s Selecting previously unselected package m4. 337s Preparing to unpack .../01-m4_1.4.19-4build1_armhf.deb ... 337s Unpacking m4 (1.4.19-4build1) ... 337s Selecting previously unselected package autoconf. 337s Preparing to unpack .../02-autoconf_2.71-3_all.deb ... 337s Unpacking autoconf (2.71-3) ... 337s Selecting previously unselected package autotools-dev. 337s Preparing to unpack .../03-autotools-dev_20220109.1_all.deb ... 337s Unpacking autotools-dev (20220109.1) ... 337s Selecting previously unselected package automake. 337s Preparing to unpack .../04-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 337s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 337s Selecting previously unselected package autopoint. 337s Preparing to unpack .../05-autopoint_0.22.5-1_all.deb ... 337s Unpacking autopoint (0.22.5-1) ... 337s Selecting previously unselected package libc-dev-bin. 337s Preparing to unpack .../06-libc-dev-bin_2.39-0ubuntu9_armhf.deb ... 337s Unpacking libc-dev-bin (2.39-0ubuntu9) ... 337s Selecting previously unselected package linux-libc-dev:armhf. 337s Preparing to unpack .../07-linux-libc-dev_6.8.0-31.31_armhf.deb ... 337s Unpacking linux-libc-dev:armhf (6.8.0-31.31) ... 337s Selecting previously unselected package libcrypt-dev:armhf. 337s Preparing to unpack .../08-libcrypt-dev_1%3a4.4.36-4build1_armhf.deb ... 337s Unpacking libcrypt-dev:armhf (1:4.4.36-4build1) ... 337s Selecting previously unselected package rpcsvc-proto. 337s Preparing to unpack .../09-rpcsvc-proto_1.4.2-0ubuntu7_armhf.deb ... 337s Unpacking rpcsvc-proto (1.4.2-0ubuntu7) ... 337s Selecting previously unselected package libc6-dev:armhf. 337s Preparing to unpack .../10-libc6-dev_2.39-0ubuntu9_armhf.deb ... 337s Unpacking libc6-dev:armhf (2.39-0ubuntu9) ... 337s Selecting previously unselected package gcc-13-base:armhf. 337s Preparing to unpack .../11-gcc-13-base_13.3.0-3ubuntu1_armhf.deb ... 337s Unpacking gcc-13-base:armhf (13.3.0-3ubuntu1) ... 337s Selecting previously unselected package libisl23:armhf. 337s Preparing to unpack .../12-libisl23_0.26-3build1_armhf.deb ... 337s Unpacking libisl23:armhf (0.26-3build1) ... 337s Selecting previously unselected package libmpc3:armhf. 337s Preparing to unpack .../13-libmpc3_1.3.1-1build1_armhf.deb ... 337s Unpacking libmpc3:armhf (1.3.1-1build1) ... 337s Selecting previously unselected package cpp-13-arm-linux-gnueabihf. 337s Preparing to unpack .../14-cpp-13-arm-linux-gnueabihf_13.3.0-3ubuntu1_armhf.deb ... 337s Unpacking cpp-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 338s Selecting previously unselected package cpp-13. 338s Preparing to unpack .../15-cpp-13_13.3.0-3ubuntu1_armhf.deb ... 338s Unpacking cpp-13 (13.3.0-3ubuntu1) ... 338s Selecting previously unselected package cpp-arm-linux-gnueabihf. 338s Preparing to unpack .../16-cpp-arm-linux-gnueabihf_4%3a13.3.0-2ubuntu2_armhf.deb ... 338s Unpacking cpp-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 338s Selecting previously unselected package cpp. 338s Preparing to unpack .../17-cpp_4%3a13.3.0-2ubuntu2_armhf.deb ... 338s Unpacking cpp (4:13.3.0-2ubuntu2) ... 338s Selecting previously unselected package libcc1-0:armhf. 338s Preparing to unpack .../18-libcc1-0_14.1.0-5ubuntu1_armhf.deb ... 338s Unpacking libcc1-0:armhf (14.1.0-5ubuntu1) ... 338s Selecting previously unselected package libgomp1:armhf. 338s Preparing to unpack .../19-libgomp1_14.1.0-5ubuntu1_armhf.deb ... 338s Unpacking libgomp1:armhf (14.1.0-5ubuntu1) ... 338s Selecting previously unselected package libatomic1:armhf. 338s Preparing to unpack .../20-libatomic1_14.1.0-5ubuntu1_armhf.deb ... 338s Unpacking libatomic1:armhf (14.1.0-5ubuntu1) ... 338s Selecting previously unselected package libasan8:armhf. 338s Preparing to unpack .../21-libasan8_14.1.0-5ubuntu1_armhf.deb ... 338s Unpacking libasan8:armhf (14.1.0-5ubuntu1) ... 338s Selecting previously unselected package libubsan1:armhf. 338s Preparing to unpack .../22-libubsan1_14.1.0-5ubuntu1_armhf.deb ... 338s Unpacking libubsan1:armhf (14.1.0-5ubuntu1) ... 338s Selecting previously unselected package libgcc-13-dev:armhf. 338s Preparing to unpack .../23-libgcc-13-dev_13.3.0-3ubuntu1_armhf.deb ... 338s Unpacking libgcc-13-dev:armhf (13.3.0-3ubuntu1) ... 338s Selecting previously unselected package gcc-13-arm-linux-gnueabihf. 338s Preparing to unpack .../24-gcc-13-arm-linux-gnueabihf_13.3.0-3ubuntu1_armhf.deb ... 338s Unpacking gcc-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 339s Selecting previously unselected package gcc-13. 339s Preparing to unpack .../25-gcc-13_13.3.0-3ubuntu1_armhf.deb ... 339s Unpacking gcc-13 (13.3.0-3ubuntu1) ... 339s Selecting previously unselected package gcc-arm-linux-gnueabihf. 339s Preparing to unpack .../26-gcc-arm-linux-gnueabihf_4%3a13.3.0-2ubuntu2_armhf.deb ... 339s Unpacking gcc-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 339s Selecting previously unselected package gcc. 339s Preparing to unpack .../27-gcc_4%3a13.3.0-2ubuntu2_armhf.deb ... 339s Unpacking gcc (4:13.3.0-2ubuntu2) ... 339s Selecting previously unselected package libstdc++-13-dev:armhf. 339s Preparing to unpack .../28-libstdc++-13-dev_13.3.0-3ubuntu1_armhf.deb ... 339s Unpacking libstdc++-13-dev:armhf (13.3.0-3ubuntu1) ... 339s Selecting previously unselected package g++-13-arm-linux-gnueabihf. 339s Preparing to unpack .../29-g++-13-arm-linux-gnueabihf_13.3.0-3ubuntu1_armhf.deb ... 339s Unpacking g++-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 339s Selecting previously unselected package g++-13. 339s Preparing to unpack .../30-g++-13_13.3.0-3ubuntu1_armhf.deb ... 339s Unpacking g++-13 (13.3.0-3ubuntu1) ... 339s Selecting previously unselected package g++-arm-linux-gnueabihf. 339s Preparing to unpack .../31-g++-arm-linux-gnueabihf_4%3a13.3.0-2ubuntu2_armhf.deb ... 339s Unpacking g++-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 339s Selecting previously unselected package g++. 339s Preparing to unpack .../32-g++_4%3a13.3.0-2ubuntu2_armhf.deb ... 339s Unpacking g++ (4:13.3.0-2ubuntu2) ... 339s Selecting previously unselected package build-essential. 339s Preparing to unpack .../33-build-essential_12.10ubuntu1_armhf.deb ... 339s Unpacking build-essential (12.10ubuntu1) ... 339s Selecting previously unselected package libdebhelper-perl. 339s Preparing to unpack .../34-libdebhelper-perl_13.16ubuntu2_all.deb ... 339s Unpacking libdebhelper-perl (13.16ubuntu2) ... 339s Selecting previously unselected package libtool. 339s Preparing to unpack .../35-libtool_2.4.7-7build1_all.deb ... 339s Unpacking libtool (2.4.7-7build1) ... 339s Selecting previously unselected package dh-autoreconf. 339s Preparing to unpack .../36-dh-autoreconf_20_all.deb ... 339s Unpacking dh-autoreconf (20) ... 339s Selecting previously unselected package libarchive-zip-perl. 339s Preparing to unpack .../37-libarchive-zip-perl_1.68-1_all.deb ... 339s Unpacking libarchive-zip-perl (1.68-1) ... 339s Selecting previously unselected package libfile-stripnondeterminism-perl. 340s Preparing to unpack .../38-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 340s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 340s Selecting previously unselected package dh-strip-nondeterminism. 340s Preparing to unpack .../39-dh-strip-nondeterminism_1.14.0-1_all.deb ... 340s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 340s Selecting previously unselected package libdw1t64:armhf. 340s Preparing to unpack .../40-libdw1t64_0.191-2_armhf.deb ... 340s Unpacking libdw1t64:armhf (0.191-2) ... 340s Selecting previously unselected package debugedit. 340s Preparing to unpack .../41-debugedit_1%3a5.0-6_armhf.deb ... 340s Unpacking debugedit (1:5.0-6) ... 340s Selecting previously unselected package dwz. 340s Preparing to unpack .../42-dwz_0.15-1build6_armhf.deb ... 340s Unpacking dwz (0.15-1build6) ... 340s Selecting previously unselected package gettext. 340s Preparing to unpack .../43-gettext_0.22.5-1_armhf.deb ... 340s Unpacking gettext (0.22.5-1) ... 340s Selecting previously unselected package intltool-debian. 340s Preparing to unpack .../44-intltool-debian_0.35.0+20060710.6_all.deb ... 340s Unpacking intltool-debian (0.35.0+20060710.6) ... 340s Selecting previously unselected package po-debconf. 340s Preparing to unpack .../45-po-debconf_1.0.21+nmu1_all.deb ... 340s Unpacking po-debconf (1.0.21+nmu1) ... 340s Selecting previously unselected package debhelper. 340s Preparing to unpack .../46-debhelper_13.16ubuntu2_all.deb ... 340s Unpacking debhelper (13.16ubuntu2) ... 340s Selecting previously unselected package dh-python. 340s Preparing to unpack .../47-dh-python_6.20240603_all.deb ... 340s Unpacking dh-python (6.20240603) ... 340s Selecting previously unselected package fonts-font-awesome. 340s Preparing to unpack .../48-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 340s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 340s Selecting previously unselected package libblas3:armhf. 340s Preparing to unpack .../49-libblas3_3.12.0-3build1_armhf.deb ... 340s Unpacking libblas3:armhf (3.12.0-3build1) ... 340s Selecting previously unselected package libgfortran5:armhf. 340s Preparing to unpack .../50-libgfortran5_14.1.0-5ubuntu1_armhf.deb ... 340s Unpacking libgfortran5:armhf (14.1.0-5ubuntu1) ... 340s Selecting previously unselected package libjs-jquery. 340s Preparing to unpack .../51-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 340s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 340s Selecting previously unselected package libjs-underscore. 340s Preparing to unpack .../52-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 340s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 340s Selecting previously unselected package libjs-sphinxdoc. 340s Preparing to unpack .../53-libjs-sphinxdoc_7.3.7-3_all.deb ... 340s Unpacking libjs-sphinxdoc (7.3.7-3) ... 340s Selecting previously unselected package liblapack3:armhf. 340s Preparing to unpack .../54-liblapack3_3.12.0-3build1_armhf.deb ... 340s Unpacking liblapack3:armhf (3.12.0-3build1) ... 340s Selecting previously unselected package liblbfgsb0:armhf. 340s Preparing to unpack .../55-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 340s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 340s Selecting previously unselected package python3-all. 340s Preparing to unpack .../56-python3-all_3.12.4-1_armhf.deb ... 340s Unpacking python3-all (3.12.4-1) ... 341s Selecting previously unselected package python3-decorator. 341s Preparing to unpack .../57-python3-decorator_5.1.1-5_all.deb ... 341s Unpacking python3-decorator (5.1.1-5) ... 341s Selecting previously unselected package python3-numpy. 341s Preparing to unpack .../58-python3-numpy_1%3a1.26.4+ds-10_armhf.deb ... 341s Unpacking python3-numpy (1:1.26.4+ds-10) ... 341s Selecting previously unselected package sphinx-rtd-theme-common. 341s Preparing to unpack .../59-sphinx-rtd-theme-common_2.0.0+dfsg-2_all.deb ... 341s Unpacking sphinx-rtd-theme-common (2.0.0+dfsg-2) ... 341s Selecting previously unselected package python3-mrcfile. 341s Preparing to unpack .../60-python3-mrcfile_1.4.3-3_all.deb ... 341s Unpacking python3-mrcfile (1.4.3-3) ... 341s Selecting previously unselected package python3-scipy. 341s Preparing to unpack .../61-python3-scipy_1.12.0-2_armhf.deb ... 341s Unpacking python3-scipy (1.12.0-2) ... 341s Selecting previously unselected package python3-griddataformats. 341s Preparing to unpack .../62-python3-griddataformats_1.0.2-1_all.deb ... 341s Unpacking python3-griddataformats (1.0.2-1) ... 341s Selecting previously unselected package python3-iniconfig. 341s Preparing to unpack .../63-python3-iniconfig_1.1.1-2_all.deb ... 342s Unpacking python3-iniconfig (1.1.1-2) ... 342s Selecting previously unselected package python3-packaging. 342s Preparing to unpack .../64-python3-packaging_24.1-1_all.deb ... 342s Unpacking python3-packaging (24.1-1) ... 342s Selecting previously unselected package python3-pluggy. 342s Preparing to unpack .../65-python3-pluggy_1.5.0-1_all.deb ... 342s Unpacking python3-pluggy (1.5.0-1) ... 342s Selecting previously unselected package python3-pytest. 342s Preparing to unpack .../66-python3-pytest_7.4.4-1_all.deb ... 342s Unpacking python3-pytest (7.4.4-1) ... 342s Selecting previously unselected package autopkgtest-satdep. 342s Preparing to unpack .../67-1-autopkgtest-satdep.deb ... 342s Unpacking autopkgtest-satdep (0) ... 342s Setting up dh-python (6.20240603) ... 342s Setting up python3-iniconfig (1.1.1-2) ... 342s Setting up fonts-lato (2.015-1) ... 342s Setting up libarchive-zip-perl (1.68-1) ... 342s Setting up libdebhelper-perl (13.16ubuntu2) ... 342s Setting up linux-libc-dev:armhf (6.8.0-31.31) ... 342s Setting up m4 (1.4.19-4build1) ... 342s Setting up python3-all (3.12.4-1) ... 342s Setting up libgomp1:armhf (14.1.0-5ubuntu1) ... 342s Setting up libdw1t64:armhf (0.191-2) ... 342s Setting up python3-decorator (5.1.1-5) ... 342s Setting up autotools-dev (20220109.1) ... 342s Setting up libblas3:armhf (3.12.0-3build1) ... 342s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 342s Setting up python3-packaging (24.1-1) ... 342s Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... 342s Setting up gcc-13-base:armhf (13.3.0-3ubuntu1) ... 342s Setting up libmpc3:armhf (1.3.1-1build1) ... 342s Setting up libatomic1:armhf (14.1.0-5ubuntu1) ... 342s Setting up autopoint (0.22.5-1) ... 342s Setting up libgfortran5:armhf (14.1.0-5ubuntu1) ... 342s Setting up autoconf (2.71-3) ... 342s Setting up python3-pluggy (1.5.0-1) ... 342s Setting up libubsan1:armhf (14.1.0-5ubuntu1) ... 342s Setting up dwz (0.15-1build6) ... 342s Setting up libcrypt-dev:armhf (1:4.4.36-4build1) ... 342s Setting up libasan8:armhf (14.1.0-5ubuntu1) ... 342s Setting up debugedit (1:5.0-6) ... 342s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 342s Setting up libisl23:armhf (0.26-3build1) ... 342s Setting up libc-dev-bin (2.39-0ubuntu9) ... 342s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 343s Setting up sphinx-rtd-theme-common (2.0.0+dfsg-2) ... 343s Setting up libcc1-0:armhf (14.1.0-5ubuntu1) ... 343s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 343s Setting up automake (1:1.16.5-1.3ubuntu1) ... 343s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 343s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 343s Setting up liblapack3:armhf (3.12.0-3build1) ... 343s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 343s Setting up gettext (0.22.5-1) ... 343s Setting up cpp-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 343s Setting up python3-pytest (7.4.4-1) ... 343s Setting up intltool-debian (0.35.0+20060710.6) ... 343s Setting up python3-numpy (1:1.26.4+ds-10) ... 345s Setting up libjs-sphinxdoc (7.3.7-3) ... 345s Setting up dh-strip-nondeterminism (1.14.0-1) ... 345s Setting up libgcc-13-dev:armhf (13.3.0-3ubuntu1) ... 345s Setting up libc6-dev:armhf (2.39-0ubuntu9) ... 345s Setting up cpp-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 345s Setting up libstdc++-13-dev:armhf (13.3.0-3ubuntu1) ... 345s Setting up liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 345s Setting up python3-mrcfile (1.4.3-3) ... 345s Setting up python3-scipy (1.12.0-2) ... 349s Setting up cpp-13 (13.3.0-3ubuntu1) ... 349s Setting up po-debconf (1.0.21+nmu1) ... 349s Setting up gcc-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 349s Setting up python3-griddataformats (1.0.2-1) ... 349s Setting up gcc-13 (13.3.0-3ubuntu1) ... 349s Setting up cpp (4:13.3.0-2ubuntu2) ... 349s Setting up gcc-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 349s Setting up g++-13-arm-linux-gnueabihf (13.3.0-3ubuntu1) ... 349s Setting up g++-arm-linux-gnueabihf (4:13.3.0-2ubuntu2) ... 349s Setting up g++-13 (13.3.0-3ubuntu1) ... 349s Setting up libtool (2.4.7-7build1) ... 349s Setting up gcc (4:13.3.0-2ubuntu2) ... 349s Setting up dh-autoreconf (20) ... 349s Setting up g++ (4:13.3.0-2ubuntu2) ... 349s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 349s Setting up build-essential (12.10ubuntu1) ... 349s Setting up debhelper (13.16ubuntu2) ... 349s Setting up autopkgtest-satdep (0) ... 349s Processing triggers for man-db (2.12.1-2) ... 350s Processing triggers for install-info (7.1-3build2) ... 350s Processing triggers for libc-bin (2.39-0ubuntu9) ... 365s (Reading database ... 65057 files and directories currently installed.) 365s Removing autopkgtest-satdep (0) ... 371s autopkgtest [12:48:54]: test command1: for py3 in `py3versions -s`; do $py3 -m pytest -v; done 371s autopkgtest [12:48:54]: test command1: [----------------------- 374s ============================= test session starts ============================== 374s platform linux -- Python 3.12.4, pytest-7.4.4, pluggy-1.5.0 -- /usr/bin/python3.12 374s cachedir: .pytest_cache 374s rootdir: /tmp/autopkgtest.GpOyjY/build.Pj4/src 374s collecting ... collected 106 items 374s 374s gridData/tests/test_dx.py::test_read_dx[infile0] PASSED [ 0%] 374s gridData/tests/test_dx.py::test_read_dx[infile1] PASSED [ 1%] 374s gridData/tests/test_dx.py::test_write_dx[float16-float-grid.dx] PASSED [ 2%] 374s gridData/tests/test_dx.py::test_write_dx[float16-float-grid.dx.gz] PASSED [ 3%] 374s gridData/tests/test_dx.py::test_write_dx[float32-float-grid.dx] PASSED [ 4%] 374s gridData/tests/test_dx.py::test_write_dx[float32-float-grid.dx.gz] PASSED [ 5%] 374s gridData/tests/test_dx.py::test_write_dx[float64-double-grid.dx] PASSED [ 6%] 374s gridData/tests/test_dx.py::test_write_dx[float64-double-grid.dx.gz] PASSED [ 7%] 374s gridData/tests/test_dx.py::test_write_dx[int64-int-grid.dx] PASSED [ 8%] 374s gridData/tests/test_dx.py::test_write_dx[int64-int-grid.dx.gz] PASSED [ 9%] 374s gridData/tests/test_dx.py::test_write_dx[int32-int-grid.dx] PASSED [ 10%] 374s gridData/tests/test_dx.py::test_write_dx[int32-int-grid.dx.gz] PASSED [ 11%] 374s gridData/tests/test_dx.py::test_write_dx[uint32-unsigned int-grid.dx] PASSED [ 12%] 374s gridData/tests/test_dx.py::test_write_dx[uint32-unsigned int-grid.dx.gz] PASSED [ 13%] 374s gridData/tests/test_dx.py::test_write_dx[uint64-unsigned int-grid.dx] PASSED [ 14%] 374s gridData/tests/test_dx.py::test_write_dx[uint64-unsigned int-grid.dx.gz] PASSED [ 15%] 374s gridData/tests/test_dx.py::test_write_dx[int16-short-grid.dx] PASSED [ 16%] 374s gridData/tests/test_dx.py::test_write_dx[int16-short-grid.dx.gz] PASSED [ 16%] 374s gridData/tests/test_dx.py::test_write_dx[uint16-unsigned short-grid.dx] PASSED [ 17%] 374s gridData/tests/test_dx.py::test_write_dx[uint16-unsigned short-grid.dx.gz] PASSED [ 18%] 374s gridData/tests/test_dx.py::test_write_dx[int8-signed byte-grid.dx] PASSED [ 19%] 374s gridData/tests/test_dx.py::test_write_dx[int8-signed byte-grid.dx.gz] PASSED [ 20%] 374s gridData/tests/test_dx.py::test_write_dx[uint8-byte-grid.dx] PASSED [ 21%] 374s gridData/tests/test_dx.py::test_write_dx[uint8-byte-grid.dx.gz] PASSED [ 22%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[complex64-grid.dx] PASSED [ 23%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[complex64-grid.dx.gz] PASSED [ 24%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[complex128-grid.dx] PASSED [ 25%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[complex128-grid.dx.gz] PASSED [ 26%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[bool_-grid.dx] PASSED [ 27%] 374s gridData/tests/test_dx.py::test_write_dx_ValueError[bool_-grid.dx.gz] PASSED [ 28%] 374s gridData/tests/test_dx.py::test_delta_precision PASSED [ 29%] 374s gridData/tests/test_gOpenMol.py::test_gOpenMol PASSED [ 30%] 374s gridData/tests/test_grid.py::TestGrid::test_init PASSED [ 31%] 374s gridData/tests/test_grid.py::TestGrid::test_init_wrong_origin PASSED [ 32%] 374s gridData/tests/test_grid.py::TestGrid::test_init_wrong_delta PASSED [ 33%] 374s gridData/tests/test_grid.py::TestGrid::test_empty_Grid PASSED [ 33%] 375s gridData/tests/test_grid.py::TestGrid::test_init_missing_delta_ValueError PASSED [ 34%] 375s gridData/tests/test_grid.py::TestGrid::test_init_missing_origin_ValueError PASSED [ 35%] 375s gridData/tests/test_grid.py::TestGrid::test_init_wrong_data_exception PASSED [ 36%] 375s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat_ValueError PASSED [ 37%] 375s gridData/tests/test_grid.py::TestGrid::test_equality PASSED [ 38%] 375s gridData/tests/test_grid.py::TestGrid::test_addition PASSED [ 39%] 375s gridData/tests/test_grid.py::TestGrid::test_subtraction PASSED [ 40%] 375s gridData/tests/test_grid.py::TestGrid::test_multiplication PASSED [ 41%] 375s gridData/tests/test_grid.py::TestGrid::test_division PASSED [ 42%] 375s gridData/tests/test_grid.py::TestGrid::test_floordivision PASSED [ 43%] 375s gridData/tests/test_grid.py::TestGrid::test_power PASSED [ 44%] 375s gridData/tests/test_grid.py::TestGrid::test_compatibility_type PASSED [ 45%] 375s gridData/tests/test_grid.py::TestGrid::test_wrong_compatibile_type PASSED [ 46%] 375s gridData/tests/test_grid.py::TestGrid::test_non_orthonormal_boxes PASSED [ 47%] 375s gridData/tests/test_grid.py::TestGrid::test_centers PASSED [ 48%] 375s gridData/tests/test_grid.py::TestGrid::test_resample_factor_failure PASSED [ 49%] 375s gridData/tests/test_grid.py::TestGrid::test_resample_factor PASSED [ 50%] 375s gridData/tests/test_grid.py::TestGrid::test_load_pickle PASSED [ 50%] 375s gridData/tests/test_grid.py::TestGrid::test_init_pickle_pathobjects PASSED [ 51%] 375s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[pkl] PASSED [ 52%] 375s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[PKL] PASSED [ 53%] 375s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[pickle] PASSED [ 54%] 375s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[python] PASSED [ 55%] 375s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[ccp4] XFAIL [ 56%] 375s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[plt] XFAIL [ 57%] 375s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[dx] XFAIL [ 58%] 375s gridData/tests/test_grid.py::TestGrid::test_export[dx] PASSED [ 59%] 375s gridData/tests/test_grid.py::TestGrid::test_export[pkl] PASSED [ 60%] 375s gridData/tests/test_grid.py::TestGrid::test_export_not_supported[ccp4] PASSED [ 61%] 375s gridData/tests/test_grid.py::TestGrid::test_export_not_supported[plt] PASSED [ 62%] 375s gridData/tests/test_grid.py::test_inheritance PASSED [ 63%] 375s gridData/tests/test_grid.py::test_anyarray PASSED [ 64%] 375s gridData/tests/test_mrc.py::test_ccp4_Grid PASSED [ 65%] 375s gridData/tests/test_mrc.py::test_ccp4_mrc PASSED [ 66%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nx-96] PASSED [ 66%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[ny-76] PASSED [ 67%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nz-70] PASSED [ 68%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[mode-2] PASSED [ 69%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nxstart--4] PASSED [ 70%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nystart--23] PASSED [ 71%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nzstart-102] PASSED [ 72%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[mx-84] PASSED [ 73%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[my-84] PASSED [ 74%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[mz-160] PASSED [ 75%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[cella-recarray] PASSED [ 76%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[cellb-recarray] PASSED [ 77%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[mapc-2] PASSED [ 78%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[mapr-1] PASSED [ 79%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[maps-3] PASSED [ 80%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[dmin--0.9930942058563232] PASSED [ 81%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[dmax-9.050403594970703] PASSED [ 82%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[dmean--0.0005801090155728161] PASSED [ 83%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[ispg-92] PASSED [ 83%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nsymbt-640] PASSED [ 84%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nversion-0] PASSED [ 85%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[origin-recarray] PASSED [ 86%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[map-MAP ] PASSED [ 87%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[machst-value23] PASSED [ 88%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[rms-0.40349153] PASSED [ 89%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[nlabl-1] PASSED [ 90%] 375s gridData/tests/test_mrc.py::test_ccp4_read_header[label-value26] PASSED [ 91%] 375s gridData/tests/test_mrc.py::test_axes_orientation PASSED [ 92%] 375s gridData/tests/test_mrc.py::test_delta PASSED [ 93%] 375s gridData/tests/test_mrc.py::test_origin PASSED [ 94%] 375s gridData/tests/test_mrc.py::test_triclinic_ValueError PASSED [ 95%] 375s gridData/tests/test_mrc.py::TestGridMRC::test_shape PASSED [ 96%] 375s gridData/tests/test_mrc.py::TestGridMRC::test_mrc_header PASSED [ 97%] 375s gridData/tests/test_mrc.py::TestGridMRC::test_delta PASSED [ 98%] 375s gridData/tests/test_mrc.py::TestGridMRC::test_origin PASSED [ 99%] 375s gridData/tests/test_mrc.py::TestGridMRC::test_data PASSED [100%] 375s 375s ======================== 103 passed, 3 xfailed in 1.35s ======================== 376s autopkgtest [12:48:59]: test command1: -----------------------] 380s command1 PASS 380s autopkgtest [12:49:03]: test command1: - - - - - - - - - - results - - - - - - - - - - 384s autopkgtest [12:49:07]: @@@@@@@@@@@@@@@@@@@@ summary 384s command1 PASS