0s autopkgtest [04:34:45]: starting date and time: 2024-06-08 04:34:45+0000 0s autopkgtest [04:34:45]: git checkout: 433ed4c Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [04:34:45]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qic8pssw/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade python-ase --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- lxd -r lxd-armhf-10.145.243.70 lxd-armhf-10.145.243.70:autopkgtest/ubuntu/oracular/armhf 33s autopkgtest [04:35:18]: testbed dpkg architecture: armhf 35s autopkgtest [04:35:20]: testbed apt version: 2.9.3 35s autopkgtest [04:35:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 46s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 46s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.3 kB] 46s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [327 kB] 46s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [1680 B] 46s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [35.4 kB] 46s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf Packages [1860 B] 46s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [238 kB] 46s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1768 B] 46s Fetched 768 kB in 2s (349 kB/s) 46s Reading package lists... 63s tee: /proc/self/fd/2: Permission denied 115s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 115s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 115s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 115s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 123s Reading package lists... 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 125s Calculating upgrade... 126s The following packages will be upgraded: 126s cloud-init cron cron-daemon-common debianutils dracut-install libnetplan1 126s libperl5.38t64 libsqlite3-0 liburcu8t64 netplan-generator netplan.io perl 126s perl-base perl-modules-5.38 python3-netplan python3-typing-extensions 126s 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 126s Need to get 10.9 MB of archives. 126s After this operation, 38.9 kB of additional disk space will be used. 126s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf debianutils armhf 5.18 [89.2 kB] 127s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libperl5.38t64 armhf 5.38.2-5 [4110 kB] 127s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf perl armhf 5.38.2-5 [231 kB] 127s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf perl-base armhf 5.38.2-5 [1671 kB] 127s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf perl-modules-5.38 all 5.38.2-5 [3110 kB] 128s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf cron armhf 3.0pl1-189ubuntu1 [83.1 kB] 128s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf netplan-generator armhf 1.0-3ubuntu1 [58.8 kB] 128s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf python3-netplan armhf 1.0-3ubuntu1 [22.5 kB] 128s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf netplan.io armhf 1.0-3ubuntu1 [64.7 kB] 128s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf libnetplan1 armhf 1.0-3ubuntu1 [115 kB] 128s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf libsqlite3-0 armhf 3.46.0-1 [605 kB] 128s Get:12 http://ftpmaster.internal/ubuntu oracular/main armhf cron-daemon-common all 3.0pl1-189ubuntu1 [14.2 kB] 128s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf dracut-install armhf 060+5-8ubuntu2 [34.4 kB] 128s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf liburcu8t64 armhf 0.14.0-4 [56.5 kB] 128s Get:15 http://ftpmaster.internal/ubuntu oracular/main armhf python3-typing-extensions all 4.12.1-1 [65.6 kB] 128s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf cloud-init all 24.2~4g5f40426f-0ubuntu1 [609 kB] 167s Preconfiguring packages ... 170s Fetched 10.9 MB in 2s (6696 kB/s) 171s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58338 files and directories currently installed.) 171s Preparing to unpack .../debianutils_5.18_armhf.deb ... 171s Unpacking debianutils (5.18) over (5.17build1) ... 173s Setting up debianutils (5.18) ... 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58338 files and directories currently installed.) 177s Preparing to unpack .../libperl5.38t64_5.38.2-5_armhf.deb ... 177s Unpacking libperl5.38t64:armhf (5.38.2-5) over (5.38.2-4) ... 180s Preparing to unpack .../perl_5.38.2-5_armhf.deb ... 180s Unpacking perl (5.38.2-5) over (5.38.2-4) ... 180s Preparing to unpack .../perl-base_5.38.2-5_armhf.deb ... 181s Unpacking perl-base (5.38.2-5) over (5.38.2-4) ... 182s Setting up perl-base (5.38.2-5) ... 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58338 files and directories currently installed.) 182s Preparing to unpack .../00-perl-modules-5.38_5.38.2-5_all.deb ... 182s Unpacking perl-modules-5.38 (5.38.2-5) over (5.38.2-4) ... 183s Preparing to unpack .../01-cron_3.0pl1-189ubuntu1_armhf.deb ... 183s Unpacking cron (3.0pl1-189ubuntu1) over (3.0pl1-184ubuntu2) ... 184s Preparing to unpack .../02-netplan-generator_1.0-3ubuntu1_armhf.deb ... 184s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 184s Unpacking netplan-generator (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 184s Preparing to unpack .../03-python3-netplan_1.0-3ubuntu1_armhf.deb ... 184s Unpacking python3-netplan (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 185s Preparing to unpack .../04-netplan.io_1.0-3ubuntu1_armhf.deb ... 185s Unpacking netplan.io (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 185s Preparing to unpack .../05-libnetplan1_1.0-3ubuntu1_armhf.deb ... 185s Unpacking libnetplan1:armhf (1.0-3ubuntu1) over (1.0-2ubuntu1) ... 185s Preparing to unpack .../06-libsqlite3-0_3.46.0-1_armhf.deb ... 185s Unpacking libsqlite3-0:armhf (3.46.0-1) over (3.45.3-1) ... 186s Preparing to unpack .../07-cron-daemon-common_3.0pl1-189ubuntu1_all.deb ... 186s Unpacking cron-daemon-common (3.0pl1-189ubuntu1) over (3.0pl1-184ubuntu2) ... 186s Preparing to unpack .../08-dracut-install_060+5-8ubuntu2_armhf.deb ... 186s Unpacking dracut-install (060+5-8ubuntu2) over (060+5-8ubuntu1) ... 186s Preparing to unpack .../09-liburcu8t64_0.14.0-4_armhf.deb ... 186s Unpacking liburcu8t64:armhf (0.14.0-4) over (0.14.0-3.1build1) ... 187s Preparing to unpack .../10-python3-typing-extensions_4.12.1-1_all.deb ... 187s Unpacking python3-typing-extensions (4.12.1-1) over (4.12.0-1) ... 187s Preparing to unpack .../11-cloud-init_24.2~4g5f40426f-0ubuntu1_all.deb ... 188s Unpacking cloud-init (24.2~4g5f40426f-0ubuntu1) over (24.2~3ge68c8c74-0ubuntu1) ... 189s Setting up liburcu8t64:armhf (0.14.0-4) ... 189s Setting up libsqlite3-0:armhf (3.46.0-1) ... 189s Setting up libnetplan1:armhf (1.0-3ubuntu1) ... 189s Setting up perl-modules-5.38 (5.38.2-5) ... 189s Setting up python3-typing-extensions (4.12.1-1) ... 189s Setting up dracut-install (060+5-8ubuntu2) ... 189s Setting up python3-netplan (1.0-3ubuntu1) ... 189s Setting up libperl5.38t64:armhf (5.38.2-5) ... 189s Setting up netplan-generator (1.0-3ubuntu1) ... 189s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 189s Setting up cron-daemon-common (3.0pl1-189ubuntu1) ... 189s Setting up cron (3.0pl1-189ubuntu1) ... 191s Setting up netplan.io (1.0-3ubuntu1) ... 191s Setting up perl (5.38.2-5) ... 191s Setting up cloud-init (24.2~4g5f40426f-0ubuntu1) ... 193s Processing triggers for rsyslog (8.2312.0-3ubuntu9) ... 193s Processing triggers for man-db (2.12.1-1) ... 195s Processing triggers for dbus (1.14.10-4ubuntu4) ... 195s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 195s Reading package lists... 196s Building dependency tree... 196s Reading state information... 198s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 200s autopkgtest [04:38:05]: rebooting testbed after setup commands that affected boot 247s autopkgtest [04:38:52]: testbed running kernel: Linux 6.5.0-35-generic #35~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Tue May 7 11:19:33 UTC 2 395s autopkgtest [04:41:20]: @@@@@@@@@@@@@@@@@@@@ apt-source python-ase 417s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.22.1-5 (dsc) [2586 B] 417s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.22.1-5 (tar) [2837 kB] 417s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-ase 3.22.1-5 (diff) [15.6 kB] 418s gpgv: Signature made Sun May 19 11:06:50 2024 UTC 418s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 418s gpgv: Can't check signature: No public key 418s dpkg-source: warning: cannot verify inline signature for ./python-ase_3.22.1-5.dsc: no acceptable signature found 418s dpkg-source: warning: diff 'src/debian/patches/2629.patch' patches file src/ase/optimize/test/systems.py more than once 418s autopkgtest [04:41:43]: testing package python-ase version 3.22.1-5 420s autopkgtest [04:41:45]: build not needed 423s autopkgtest [04:41:48]: test command1: preparing testbed 432s Reading package lists... 433s Building dependency tree... 433s Reading state information... 433s Starting pkgProblemResolver with broken count: 0 433s Starting 2 pkgProblemResolver with broken count: 0 433s Done 435s The following additional packages will be installed: 435s ase blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 435s fonts-font-awesome fonts-glyphicons-halflings fonts-lyx libaec0 libblas3 435s libdeflate0 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 435s libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libimagequant0 libjbig0 435s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-ui 435s liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libnetcdf19t64 libopenjp2-7 435s libqhull-r8.0 libraqm0 libsharpyuv0 libsymspg2 libsz2 libtcl8.6 libtiff6 435s libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 435s libxss1 python-matplotlib-data python3-all python3-appdirs python3-ase 435s python3-brotli python3-cftime python3-contourpy python3-cycler 435s python3-dateutil python3-decorator python3-fonttools python3-fs 435s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 435s python3-matplotlib python3-mpmath python3-netcdf4 python3-numpy 435s python3-packaging python3-pil python3-pil.imagetk python3-pluggy 435s python3-pycodcif python3-pytest python3-pytest-mock python3-scipy 435s python3-spglib python3-sympy python3-tk python3-tz python3-ufolib2 435s python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 435s Suggested packages: 435s python-ase-doc blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 435s python-cycler-doc python-lxml-doc cm-super-minimal dvipng ffmpeg 435s fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common 435s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 435s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 435s python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python-pil-doc 435s python-pytest-mock-doc python-scipy-doc texlive-fonts-extra python-sympy-doc 435s tix python3-tk-dbg 435s Recommended packages: 435s javascript-common python3-bs4 python3-cssselect python3-html5lib 435s python3-olefile g++ | c++-compiler isympy-common 435s The following NEW packages will be installed: 435s ase autopkgtest-satdep blt fontconfig-config fonts-dejavu-core 435s fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings fonts-lyx 435s libaec0 libblas3 libdeflate0 libfontconfig1 libfreetype6 libgfortran5 435s libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 435s libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery 435s libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libnetcdf19t64 435s libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 libsymspg2 libsz2 libtcl8.6 435s libtiff6 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 435s libxslt1.1 libxss1 python-matplotlib-data python3-all python3-appdirs 435s python3-ase python3-brotli python3-cftime python3-contourpy python3-cycler 435s python3-dateutil python3-decorator python3-fonttools python3-fs 435s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 435s python3-matplotlib python3-mpmath python3-netcdf4 python3-numpy 435s python3-packaging python3-pil python3-pil.imagetk python3-pluggy 435s python3-pycodcif python3-pytest python3-pytest-mock python3-scipy 435s python3-spglib python3-sympy python3-tk python3-tz python3-ufolib2 435s python3-unicodedata2 tk8.6-blt2.5 unicode-data x11-common 435s 0 upgraded, 85 newly installed, 0 to remove and 0 not upgraded. 435s Need to get 59.9 MB/59.9 MB of archives. 435s After this operation, 230 MB of additional disk space will be used. 435s Get:1 /tmp/autopkgtest.NzSeaC/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [744 B] 435s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 435s Get:3 http://ftpmaster.internal/ubuntu oracular/universe armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 435s Get:4 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 435s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 435s Get:6 http://ftpmaster.internal/ubuntu oracular/universe armhf libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 435s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 435s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran5 armhf 14.1.0-1ubuntu1 [311 kB] 435s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 436s Get:10 http://ftpmaster.internal/ubuntu oracular/main armhf python3-numpy armhf 1:1.26.4+ds-10 [3541 kB] 436s Get:11 http://ftpmaster.internal/ubuntu oracular/main armhf python3-decorator all 5.1.1-5 [10.1 kB] 436s Get:12 http://ftpmaster.internal/ubuntu oracular/universe armhf liblbfgsb0 armhf 3.0+dfsg.4-1build1 [27.4 kB] 436s Get:13 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-scipy armhf 1.11.4-10 [15.1 MB] 437s Get:14 http://ftpmaster.internal/ubuntu oracular/universe armhf libsymspg2 armhf 2.3.1-1ubuntu2 [197 kB] 437s Get:15 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-spglib armhf 2.3.1-1ubuntu2 [27.6 kB] 437s Get:16 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] 437s Get:17 http://ftpmaster.internal/ubuntu oracular/main armhf fonts-dejavu-core all 2.37-8 [835 kB] 437s Get:18 http://ftpmaster.internal/ubuntu oracular/universe armhf fonts-lyx all 2.4.0-1 [171 kB] 437s Get:19 http://ftpmaster.internal/ubuntu oracular/universe armhf python-matplotlib-data all 3.6.3-2ubuntu1 [2937 kB] 437s Get:20 http://ftpmaster.internal/ubuntu oracular/main armhf python3-dateutil all 2.9.0-2 [80.3 kB] 437s Get:21 http://ftpmaster.internal/ubuntu oracular/main armhf libfreetype6 armhf 2.13.2+dfsg-1build3 [331 kB] 437s Get:22 http://ftpmaster.internal/ubuntu oracular/main armhf libgomp1 armhf 14.1.0-1ubuntu1 [125 kB] 437s Get:23 http://ftpmaster.internal/ubuntu oracular/main armhf libimagequant0 armhf 2.18.0-1build1 [31.1 kB] 437s Get:24 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] 437s Get:25 http://ftpmaster.internal/ubuntu oracular/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] 437s Get:26 http://ftpmaster.internal/ubuntu oracular/main armhf liblcms2-2 armhf 2.14-2build1 [132 kB] 437s Get:27 http://ftpmaster.internal/ubuntu oracular/main armhf libopenjp2-7 armhf 2.5.0-2build3 [160 kB] 437s Get:28 http://ftpmaster.internal/ubuntu oracular/main armhf libgraphite2-3 armhf 1.3.14-2build1 [64.6 kB] 437s Get:29 http://ftpmaster.internal/ubuntu oracular/main armhf libharfbuzz0b armhf 8.3.0-2build2 [446 kB] 437s Get:30 http://ftpmaster.internal/ubuntu oracular/main armhf libraqm0 armhf 0.10.1-1build1 [12.4 kB] 437s Get:31 http://ftpmaster.internal/ubuntu oracular/main armhf libdeflate0 armhf 1.20-1 [38.3 kB] 437s Get:32 http://ftpmaster.internal/ubuntu oracular/main armhf libjbig0 armhf 2.1-6.1ubuntu2 [24.9 kB] 437s Get:33 http://ftpmaster.internal/ubuntu oracular/main armhf liblerc4 armhf 4.0.0+ds-4ubuntu2 [151 kB] 437s Get:34 http://ftpmaster.internal/ubuntu oracular/main armhf libsharpyuv0 armhf 1.4.0-0.1 [16.3 kB] 437s Get:35 http://ftpmaster.internal/ubuntu oracular/main armhf libwebp7 armhf 1.4.0-0.1 [184 kB] 437s Get:36 http://ftpmaster.internal/ubuntu oracular/main armhf libtiff6 armhf 4.5.1+git230720-4ubuntu2 [178 kB] 437s Get:37 http://ftpmaster.internal/ubuntu oracular/main armhf libwebpdemux2 armhf 1.4.0-0.1 [11.8 kB] 437s Get:38 http://ftpmaster.internal/ubuntu oracular/main armhf libwebpmux3 armhf 1.4.0-0.1 [22.5 kB] 437s Get:39 http://ftpmaster.internal/ubuntu oracular/main armhf python3-pil armhf 10.3.0-2 [423 kB] 437s Get:40 http://ftpmaster.internal/ubuntu oracular/main armhf libtcl8.6 armhf 8.6.14+dfsg-1build1 [903 kB] 437s Get:41 http://ftpmaster.internal/ubuntu oracular/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] 437s Get:42 http://ftpmaster.internal/ubuntu oracular/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] 437s Get:43 http://ftpmaster.internal/ubuntu oracular/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] 437s Get:44 http://ftpmaster.internal/ubuntu oracular/main armhf libxft2 armhf 2.3.6-1build1 [37.4 kB] 437s Get:45 http://ftpmaster.internal/ubuntu oracular/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] 437s Get:46 http://ftpmaster.internal/ubuntu oracular/main armhf libxss1 armhf 1:1.2.3-1build3 [6500 B] 437s Get:47 http://ftpmaster.internal/ubuntu oracular/main armhf libtk8.6 armhf 8.6.14-1build1 [681 kB] 437s Get:48 http://ftpmaster.internal/ubuntu oracular/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7build1 [525 kB] 437s Get:49 http://ftpmaster.internal/ubuntu oracular/main armhf blt armhf 2.5.3+dfsg-7build1 [4840 B] 438s Get:50 http://ftpmaster.internal/ubuntu oracular/main armhf python3-tk armhf 3.12.3-0ubuntu1 [99.2 kB] 438s Get:51 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pil.imagetk armhf 10.3.0-2 [8660 B] 438s Get:52 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-contourpy armhf 1.0.7-3 [171 kB] 438s Get:53 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-cycler all 0.12.1-1 [9716 B] 438s Get:54 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-brotli armhf 1.1.0-2build2 [321 kB] 438s Get:55 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 438s Get:56 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-mpmath all 1.3.0-1 [425 kB] 438s Get:57 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-sympy all 1.12-8 [3966 kB] 438s Get:58 http://ftpmaster.internal/ubuntu oracular/main armhf python3-tz all 2024.1-2 [31.4 kB] 438s Get:59 http://ftpmaster.internal/ubuntu oracular/main armhf python3-appdirs all 1.4.4-4 [10.9 kB] 438s Get:60 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-fs all 2.4.16-4 [91.3 kB] 438s Get:61 http://ftpmaster.internal/ubuntu oracular/main armhf libxslt1.1 armhf 1.1.39-0exp1build1 [150 kB] 438s Get:62 http://ftpmaster.internal/ubuntu oracular/main armhf python3-lxml armhf 5.2.1-1 [1200 kB] 438s Get:63 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-lz4 armhf 4.0.2+dfsg-1build4 [24.8 kB] 438s Get:64 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-unicodedata2 armhf 15.1.0+ds-1build1 [361 kB] 438s Get:65 http://ftpmaster.internal/ubuntu oracular/main armhf python3-all armhf 3.12.3-0ubuntu1 [886 B] 438s Get:66 http://ftpmaster.internal/ubuntu oracular/universe armhf unicode-data all 15.1.0-1 [8878 kB] 438s Get:67 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-fonttools armhf 4.46.0-1build2 [1402 kB] 438s Get:68 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-kiwisolver armhf 1.4.5-1 [56.3 kB] 438s Get:69 http://ftpmaster.internal/ubuntu oracular/main armhf python3-packaging all 24.0-1 [41.1 kB] 438s Get:70 http://ftpmaster.internal/ubuntu oracular/universe armhf libqhull-r8.0 armhf 2020.2-6build1 [173 kB] 438s Get:71 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-matplotlib armhf 3.6.3-2ubuntu1 [5964 kB] 438s Get:72 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-ase all 3.22.1-5 [1405 kB] 438s Get:73 http://ftpmaster.internal/ubuntu oracular/universe armhf ase all 3.22.1-5 [31.3 kB] 438s Get:74 http://ftpmaster.internal/ubuntu oracular/universe armhf libaec0 armhf 1.1.3-1 [20.8 kB] 438s Get:75 http://ftpmaster.internal/ubuntu oracular/universe armhf libsz2 armhf 1.1.3-1 [5302 B] 438s Get:76 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-103-1t64 armhf 1.10.10+repack-3.1ubuntu4 [1337 kB] 438s Get:77 http://ftpmaster.internal/ubuntu oracular/universe armhf libhdf5-hl-100t64 armhf 1.10.10+repack-3.1ubuntu4 [54.8 kB] 438s Get:78 http://ftpmaster.internal/ubuntu oracular/universe armhf libnetcdf19t64 armhf 1:4.9.2-6 [422 kB] 438s Get:79 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-cftime armhf 1.6.4-1 [202 kB] 438s Get:80 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-iniconfig all 1.1.1-2 [6024 B] 438s Get:81 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-netcdf4 armhf 1.6.5-1build3 [542 kB] 438s Get:82 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pluggy all 1.5.0-1 [21.0 kB] 438s Get:83 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pycodcif armhf 3.10.0+dfsg-1 [56.9 kB] 438s Get:84 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf python3-pytest all 8.2.2-1ubuntu1 [250 kB] 438s Get:85 http://ftpmaster.internal/ubuntu oracular/universe armhf python3-pytest-mock all 3.12.0-1.1 [11.3 kB] 439s Fetched 59.9 MB in 4s (16.1 MB/s) 439s Selecting previously unselected package fonts-font-awesome. 439s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58338 files and directories currently installed.) 439s Preparing to unpack .../00-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 439s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 439s Selecting previously unselected package fonts-glyphicons-halflings. 439s Preparing to unpack .../01-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 439s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 440s Selecting previously unselected package libjs-bootstrap. 440s Preparing to unpack .../02-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 440s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 440s Selecting previously unselected package libjs-jquery. 440s Preparing to unpack .../03-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 440s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 440s Selecting previously unselected package libjs-jquery-ui. 440s Preparing to unpack .../04-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 440s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 440s Selecting previously unselected package libblas3:armhf. 440s Preparing to unpack .../05-libblas3_3.12.0-3build1_armhf.deb ... 440s Unpacking libblas3:armhf (3.12.0-3build1) ... 440s Selecting previously unselected package libgfortran5:armhf. 440s Preparing to unpack .../06-libgfortran5_14.1.0-1ubuntu1_armhf.deb ... 440s Unpacking libgfortran5:armhf (14.1.0-1ubuntu1) ... 440s Selecting previously unselected package liblapack3:armhf. 440s Preparing to unpack .../07-liblapack3_3.12.0-3build1_armhf.deb ... 440s Unpacking liblapack3:armhf (3.12.0-3build1) ... 440s Selecting previously unselected package python3-numpy. 440s Preparing to unpack .../08-python3-numpy_1%3a1.26.4+ds-10_armhf.deb ... 440s Unpacking python3-numpy (1:1.26.4+ds-10) ... 440s Selecting previously unselected package python3-decorator. 440s Preparing to unpack .../09-python3-decorator_5.1.1-5_all.deb ... 440s Unpacking python3-decorator (5.1.1-5) ... 440s Selecting previously unselected package liblbfgsb0:armhf. 440s Preparing to unpack .../10-liblbfgsb0_3.0+dfsg.4-1build1_armhf.deb ... 440s Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1build1) ... 440s Selecting previously unselected package python3-scipy. 441s Preparing to unpack .../11-python3-scipy_1.11.4-10_armhf.deb ... 441s Unpacking python3-scipy (1.11.4-10) ... 441s Selecting previously unselected package libsymspg2:armhf. 441s Preparing to unpack .../12-libsymspg2_2.3.1-1ubuntu2_armhf.deb ... 441s Unpacking libsymspg2:armhf (2.3.1-1ubuntu2) ... 441s Selecting previously unselected package python3-spglib. 441s Preparing to unpack .../13-python3-spglib_2.3.1-1ubuntu2_armhf.deb ... 441s Unpacking python3-spglib (2.3.1-1ubuntu2) ... 441s Selecting previously unselected package fonts-dejavu-mono. 441s Preparing to unpack .../14-fonts-dejavu-mono_2.37-8_all.deb ... 441s Unpacking fonts-dejavu-mono (2.37-8) ... 441s Selecting previously unselected package fonts-dejavu-core. 441s Preparing to unpack .../15-fonts-dejavu-core_2.37-8_all.deb ... 441s Unpacking fonts-dejavu-core (2.37-8) ... 441s Selecting previously unselected package fonts-lyx. 441s Preparing to unpack .../16-fonts-lyx_2.4.0-1_all.deb ... 441s Unpacking fonts-lyx (2.4.0-1) ... 441s Selecting previously unselected package python-matplotlib-data. 442s Preparing to unpack .../17-python-matplotlib-data_3.6.3-2ubuntu1_all.deb ... 442s Unpacking python-matplotlib-data (3.6.3-2ubuntu1) ... 442s Selecting previously unselected package python3-dateutil. 442s Preparing to unpack .../18-python3-dateutil_2.9.0-2_all.deb ... 442s Unpacking python3-dateutil (2.9.0-2) ... 442s Selecting previously unselected package libfreetype6:armhf. 442s Preparing to unpack .../19-libfreetype6_2.13.2+dfsg-1build3_armhf.deb ... 442s Unpacking libfreetype6:armhf (2.13.2+dfsg-1build3) ... 442s Selecting previously unselected package libgomp1:armhf. 442s Preparing to unpack .../20-libgomp1_14.1.0-1ubuntu1_armhf.deb ... 442s Unpacking libgomp1:armhf (14.1.0-1ubuntu1) ... 442s Selecting previously unselected package libimagequant0:armhf. 442s Preparing to unpack .../21-libimagequant0_2.18.0-1build1_armhf.deb ... 442s Unpacking libimagequant0:armhf (2.18.0-1build1) ... 442s Selecting previously unselected package libjpeg-turbo8:armhf. 442s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-2ubuntu2_armhf.deb ... 442s Unpacking libjpeg-turbo8:armhf (2.1.5-2ubuntu2) ... 442s Selecting previously unselected package libjpeg8:armhf. 442s Preparing to unpack .../23-libjpeg8_8c-2ubuntu11_armhf.deb ... 442s Unpacking libjpeg8:armhf (8c-2ubuntu11) ... 442s Selecting previously unselected package liblcms2-2:armhf. 442s Preparing to unpack .../24-liblcms2-2_2.14-2build1_armhf.deb ... 442s Unpacking liblcms2-2:armhf (2.14-2build1) ... 442s Selecting previously unselected package libopenjp2-7:armhf. 442s Preparing to unpack .../25-libopenjp2-7_2.5.0-2build3_armhf.deb ... 442s Unpacking libopenjp2-7:armhf (2.5.0-2build3) ... 442s Selecting previously unselected package libgraphite2-3:armhf. 442s Preparing to unpack .../26-libgraphite2-3_1.3.14-2build1_armhf.deb ... 442s Unpacking libgraphite2-3:armhf (1.3.14-2build1) ... 442s Selecting previously unselected package libharfbuzz0b:armhf. 442s Preparing to unpack .../27-libharfbuzz0b_8.3.0-2build2_armhf.deb ... 442s Unpacking libharfbuzz0b:armhf (8.3.0-2build2) ... 442s Selecting previously unselected package libraqm0:armhf. 442s Preparing to unpack .../28-libraqm0_0.10.1-1build1_armhf.deb ... 442s Unpacking libraqm0:armhf (0.10.1-1build1) ... 442s Selecting previously unselected package libdeflate0:armhf. 442s Preparing to unpack .../29-libdeflate0_1.20-1_armhf.deb ... 442s Unpacking libdeflate0:armhf (1.20-1) ... 442s Selecting previously unselected package libjbig0:armhf. 442s Preparing to unpack .../30-libjbig0_2.1-6.1ubuntu2_armhf.deb ... 442s Unpacking libjbig0:armhf (2.1-6.1ubuntu2) ... 442s Selecting previously unselected package liblerc4:armhf. 442s Preparing to unpack .../31-liblerc4_4.0.0+ds-4ubuntu2_armhf.deb ... 442s Unpacking liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 442s Selecting previously unselected package libsharpyuv0:armhf. 442s Preparing to unpack .../32-libsharpyuv0_1.4.0-0.1_armhf.deb ... 443s Unpacking libsharpyuv0:armhf (1.4.0-0.1) ... 443s Selecting previously unselected package libwebp7:armhf. 443s Preparing to unpack .../33-libwebp7_1.4.0-0.1_armhf.deb ... 443s Unpacking libwebp7:armhf (1.4.0-0.1) ... 443s Selecting previously unselected package libtiff6:armhf. 443s Preparing to unpack .../34-libtiff6_4.5.1+git230720-4ubuntu2_armhf.deb ... 443s Unpacking libtiff6:armhf (4.5.1+git230720-4ubuntu2) ... 443s Selecting previously unselected package libwebpdemux2:armhf. 443s Preparing to unpack .../35-libwebpdemux2_1.4.0-0.1_armhf.deb ... 443s Unpacking libwebpdemux2:armhf (1.4.0-0.1) ... 443s Selecting previously unselected package libwebpmux3:armhf. 443s Preparing to unpack .../36-libwebpmux3_1.4.0-0.1_armhf.deb ... 443s Unpacking libwebpmux3:armhf (1.4.0-0.1) ... 443s Selecting previously unselected package python3-pil:armhf. 443s Preparing to unpack .../37-python3-pil_10.3.0-2_armhf.deb ... 443s Unpacking python3-pil:armhf (10.3.0-2) ... 443s Selecting previously unselected package libtcl8.6:armhf. 443s Preparing to unpack .../38-libtcl8.6_8.6.14+dfsg-1build1_armhf.deb ... 443s Unpacking libtcl8.6:armhf (8.6.14+dfsg-1build1) ... 443s Selecting previously unselected package fontconfig-config. 443s Preparing to unpack .../39-fontconfig-config_2.15.0-1.1ubuntu2_armhf.deb ... 443s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 443s Selecting previously unselected package libfontconfig1:armhf. 443s Preparing to unpack .../40-libfontconfig1_2.15.0-1.1ubuntu2_armhf.deb ... 443s Unpacking libfontconfig1:armhf (2.15.0-1.1ubuntu2) ... 443s Selecting previously unselected package libxrender1:armhf. 443s Preparing to unpack .../41-libxrender1_1%3a0.9.10-1.1build1_armhf.deb ... 443s Unpacking libxrender1:armhf (1:0.9.10-1.1build1) ... 443s Selecting previously unselected package libxft2:armhf. 444s Preparing to unpack .../42-libxft2_2.3.6-1build1_armhf.deb ... 444s Unpacking libxft2:armhf (2.3.6-1build1) ... 444s Selecting previously unselected package x11-common. 444s Preparing to unpack .../43-x11-common_1%3a7.7+23ubuntu3_all.deb ... 444s Unpacking x11-common (1:7.7+23ubuntu3) ... 444s Selecting previously unselected package libxss1:armhf. 444s Preparing to unpack .../44-libxss1_1%3a1.2.3-1build3_armhf.deb ... 444s Unpacking libxss1:armhf (1:1.2.3-1build3) ... 444s Selecting previously unselected package libtk8.6:armhf. 444s Preparing to unpack .../45-libtk8.6_8.6.14-1build1_armhf.deb ... 444s Unpacking libtk8.6:armhf (8.6.14-1build1) ... 444s Selecting previously unselected package tk8.6-blt2.5. 444s Preparing to unpack .../46-tk8.6-blt2.5_2.5.3+dfsg-7build1_armhf.deb ... 444s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 444s Selecting previously unselected package blt. 444s Preparing to unpack .../47-blt_2.5.3+dfsg-7build1_armhf.deb ... 444s Unpacking blt (2.5.3+dfsg-7build1) ... 444s Selecting previously unselected package python3-tk:armhf. 444s Preparing to unpack .../48-python3-tk_3.12.3-0ubuntu1_armhf.deb ... 444s Unpacking python3-tk:armhf (3.12.3-0ubuntu1) ... 444s Selecting previously unselected package python3-pil.imagetk:armhf. 444s Preparing to unpack .../49-python3-pil.imagetk_10.3.0-2_armhf.deb ... 444s Unpacking python3-pil.imagetk:armhf (10.3.0-2) ... 444s Selecting previously unselected package python3-contourpy. 444s Preparing to unpack .../50-python3-contourpy_1.0.7-3_armhf.deb ... 444s Unpacking python3-contourpy (1.0.7-3) ... 444s Selecting previously unselected package python3-cycler. 444s Preparing to unpack .../51-python3-cycler_0.12.1-1_all.deb ... 444s Unpacking python3-cycler (0.12.1-1) ... 444s Selecting previously unselected package python3-brotli. 444s Preparing to unpack .../52-python3-brotli_1.1.0-2build2_armhf.deb ... 444s Unpacking python3-brotli (1.1.0-2build2) ... 444s Selecting previously unselected package python3-ufolib2. 444s Preparing to unpack .../53-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 444s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 444s Selecting previously unselected package python3-mpmath. 444s Preparing to unpack .../54-python3-mpmath_1.3.0-1_all.deb ... 444s Unpacking python3-mpmath (1.3.0-1) ... 444s Selecting previously unselected package python3-sympy. 444s Preparing to unpack .../55-python3-sympy_1.12-8_all.deb ... 444s Unpacking python3-sympy (1.12-8) ... 445s Selecting previously unselected package python3-tz. 445s Preparing to unpack .../56-python3-tz_2024.1-2_all.deb ... 445s Unpacking python3-tz (2024.1-2) ... 445s Selecting previously unselected package python3-appdirs. 445s Preparing to unpack .../57-python3-appdirs_1.4.4-4_all.deb ... 445s Unpacking python3-appdirs (1.4.4-4) ... 445s Selecting previously unselected package python3-fs. 445s Preparing to unpack .../58-python3-fs_2.4.16-4_all.deb ... 445s Unpacking python3-fs (2.4.16-4) ... 445s Selecting previously unselected package libxslt1.1:armhf. 445s Preparing to unpack .../59-libxslt1.1_1.1.39-0exp1build1_armhf.deb ... 445s Unpacking libxslt1.1:armhf (1.1.39-0exp1build1) ... 445s Selecting previously unselected package python3-lxml:armhf. 445s Preparing to unpack .../60-python3-lxml_5.2.1-1_armhf.deb ... 445s Unpacking python3-lxml:armhf (5.2.1-1) ... 445s Selecting previously unselected package python3-lz4. 445s Preparing to unpack .../61-python3-lz4_4.0.2+dfsg-1build4_armhf.deb ... 445s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 445s Selecting previously unselected package python3-unicodedata2. 445s Preparing to unpack .../62-python3-unicodedata2_15.1.0+ds-1build1_armhf.deb ... 445s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 445s Selecting previously unselected package python3-all. 445s Preparing to unpack .../63-python3-all_3.12.3-0ubuntu1_armhf.deb ... 445s Unpacking python3-all (3.12.3-0ubuntu1) ... 445s Selecting previously unselected package unicode-data. 445s Preparing to unpack .../64-unicode-data_15.1.0-1_all.deb ... 445s Unpacking unicode-data (15.1.0-1) ... 445s Selecting previously unselected package python3-fonttools. 445s Preparing to unpack .../65-python3-fonttools_4.46.0-1build2_armhf.deb ... 445s Unpacking python3-fonttools (4.46.0-1build2) ... 446s Selecting previously unselected package python3-kiwisolver. 446s Preparing to unpack .../66-python3-kiwisolver_1.4.5-1_armhf.deb ... 446s Unpacking python3-kiwisolver (1.4.5-1) ... 446s Selecting previously unselected package python3-packaging. 446s Preparing to unpack .../67-python3-packaging_24.0-1_all.deb ... 446s Unpacking python3-packaging (24.0-1) ... 446s Selecting previously unselected package libqhull-r8.0:armhf. 446s Preparing to unpack .../68-libqhull-r8.0_2020.2-6build1_armhf.deb ... 446s Unpacking libqhull-r8.0:armhf (2020.2-6build1) ... 446s Selecting previously unselected package python3-matplotlib. 446s Preparing to unpack .../69-python3-matplotlib_3.6.3-2ubuntu1_armhf.deb ... 446s Unpacking python3-matplotlib (3.6.3-2ubuntu1) ... 446s Selecting previously unselected package python3-ase. 446s Preparing to unpack .../70-python3-ase_3.22.1-5_all.deb ... 446s Unpacking python3-ase (3.22.1-5) ... 446s Selecting previously unselected package ase. 446s Preparing to unpack .../71-ase_3.22.1-5_all.deb ... 446s Unpacking ase (3.22.1-5) ... 446s Selecting previously unselected package libaec0:armhf. 446s Preparing to unpack .../72-libaec0_1.1.3-1_armhf.deb ... 446s Unpacking libaec0:armhf (1.1.3-1) ... 446s Selecting previously unselected package libsz2:armhf. 446s Preparing to unpack .../73-libsz2_1.1.3-1_armhf.deb ... 446s Unpacking libsz2:armhf (1.1.3-1) ... 446s Selecting previously unselected package libhdf5-103-1t64:armhf. 446s Preparing to unpack .../74-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 446s Unpacking libhdf5-103-1t64:armhf (1.10.10+repack-3.1ubuntu4) ... 446s Selecting previously unselected package libhdf5-hl-100t64:armhf. 446s Preparing to unpack .../75-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_armhf.deb ... 446s Unpacking libhdf5-hl-100t64:armhf (1.10.10+repack-3.1ubuntu4) ... 446s Selecting previously unselected package libnetcdf19t64:armhf. 446s Preparing to unpack .../76-libnetcdf19t64_1%3a4.9.2-6_armhf.deb ... 446s Unpacking libnetcdf19t64:armhf (1:4.9.2-6) ... 446s Selecting previously unselected package python3-cftime. 446s Preparing to unpack .../77-python3-cftime_1.6.4-1_armhf.deb ... 446s Unpacking python3-cftime (1.6.4-1) ... 446s Selecting previously unselected package python3-iniconfig. 446s Preparing to unpack .../78-python3-iniconfig_1.1.1-2_all.deb ... 446s Unpacking python3-iniconfig (1.1.1-2) ... 447s Selecting previously unselected package python3-netcdf4. 447s Preparing to unpack .../79-python3-netcdf4_1.6.5-1build3_armhf.deb ... 447s Unpacking python3-netcdf4 (1.6.5-1build3) ... 447s Selecting previously unselected package python3-pluggy. 447s Preparing to unpack .../80-python3-pluggy_1.5.0-1_all.deb ... 447s Unpacking python3-pluggy (1.5.0-1) ... 447s Selecting previously unselected package python3-pycodcif. 447s Preparing to unpack .../81-python3-pycodcif_3.10.0+dfsg-1_armhf.deb ... 447s Unpacking python3-pycodcif (3.10.0+dfsg-1) ... 447s Selecting previously unselected package python3-pytest. 447s Preparing to unpack .../82-python3-pytest_8.2.2-1ubuntu1_all.deb ... 447s Unpacking python3-pytest (8.2.2-1ubuntu1) ... 447s Selecting previously unselected package python3-pytest-mock. 447s Preparing to unpack .../83-python3-pytest-mock_3.12.0-1.1_all.deb ... 447s Unpacking python3-pytest-mock (3.12.0-1.1) ... 447s Selecting previously unselected package autopkgtest-satdep. 447s Preparing to unpack .../84-1-autopkgtest-satdep.deb ... 447s Unpacking autopkgtest-satdep (0) ... 447s Setting up libgraphite2-3:armhf (1.3.14-2build1) ... 447s Setting up liblcms2-2:armhf (2.14-2build1) ... 447s Setting up python3-iniconfig (1.1.1-2) ... 447s Setting up libsharpyuv0:armhf (1.4.0-0.1) ... 447s Setting up liblerc4:armhf (4.0.0+ds-4ubuntu2) ... 447s Setting up libxrender1:armhf (1:0.9.10-1.1build1) ... 447s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 447s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 447s Setting up python3-unicodedata2 (15.1.0+ds-1build1) ... 447s Setting up 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(10.3.0-2) ... 468s Setting up python3-fonttools (4.46.0-1build2) ... 471s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 471s Setting up python3-matplotlib (3.6.3-2ubuntu1) ... 474s Setting up python3-ase (3.22.1-5) ... 476s Setting up ase (3.22.1-5) ... 476s Setting up autopkgtest-satdep (0) ... 476s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 477s Processing triggers for man-db (2.12.1-1) ... 500s (Reading database ... 66661 files and directories currently installed.) 500s Removing autopkgtest-satdep (0) ... 506s autopkgtest [04:43:11]: test command1: for py in $(py3versions -d); do cd "$AUTOPKGTEST_TMP"; $py -m ase test; done 506s autopkgtest [04:43:11]: test command1: [----------------------- 513s About to run pytest with these parameters: 513s -v 514s ============================= test session starts ============================== 514s platform linux -- Python 3.12.3, pytest-8.2.2, pluggy-1.5.0 -- /usr/bin/python3.12 514s 514s Libraries 514s ========= 514s 514s ase-3.22.1 /usr/lib/python3/dist-packages/ase 514s numpy-1.26.4 /usr/lib/python3/dist-packages/numpy 514s scipy-1.11.4 /usr/lib/python3/dist-packages/scipy 514s matplotlib-3.6.3 /usr/lib/python3/dist-packages/matplotlib 514s spglib-2.3.1 /usr/lib/python3/dist-packages/spglib 514s ase_ext not installed 514s flask not installed 514s psycopg2 not installed 514s pyamg not installed 514s 514s 514s Calculators 514s =========== 514s Config: No configuration file specified 514s Datafiles: ase-datafiles package not installed 514s 514s [ ] abinit not installed 514s [ ] aims not installed 514s [ ] asap not installed 514s [ ] castep not installed 514s [ ] cp2k not installed 514s [ ] dftb not installed 514s [ ] dftd3 not installed 514s [ ] elk not installed 514s [ ] espresso not installed 514s [ ] exciting not installed 514s [ ] gpaw not installed 514s [ ] gromacs not installed 514s [ ] lammpslib not installed 514s [ ] lammpsrun not installed 514s [ ] nwchem not installed 514s [ ] octopus not installed 514s [ ] openmx not installed 514s [ ] siesta not installed 514s [ ] vasp not installed 514s 514s * Use --calculators option to select calculators. 514s 514s * See "ase test --help-calculators" on how to configure calculators. 514s 514s * This listing only includes external calculators known by the test 514s system. Others are "configured" by setting an environment variable 514s like "ASE_xxx_COMMAND" in order to allow tests to run. Please see 514s the documentation of that individual calculator. 514s 514s 514s rootdir: /usr/lib/python3/dist-packages/ase/test 514s configfile: pytest.ini 514s plugins: mock-3.12.0 519s collecting ... collected 1963 items 519s 520s atoms/test_atom.py::test_atom PASSED [ 0%] 520s atoms/test_atom.py::test_repr PASSED [ 0%] 520s atoms/test_atom_scaled_pos.py::test_abc_and_scaled_position PASSED [ 0%] 520s atoms/test_atom_scaled_pos.py::test_set_scaled_position PASSED [ 0%] 520s atoms/test_atom_scaled_pos.py::test_set_abc PASSED [ 0%] 520s atoms/test_atoms.py::test_atoms PASSED [ 0%] 520s atoms/test_atoms.py::test_numbers_input PASSED [ 0%] 520s atoms/test_atoms.py::test_bad_array_shape PASSED [ 0%] 520s atoms/test_atoms.py::test_set_masses PASSED [ 0%] 520s atoms/test_atoms.py::test_com[0] PASSED [ 0%] 520s atoms/test_atoms.py::test_com[10] PASSED [ 0%] 520s atoms/test_atoms_angle.py::test_atoms_angle PASSED [ 0%] 520s atoms/test_atoms_distance.py::test_atoms_distance PASSED [ 0%] 520s 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fio/test_lammpsdump.py::test_recognize_lammpsdump[ITEM: TIMESTEP] PASSED [ 42%] 609s fio/test_lammpsdump.py::test_recognize_lammpsdump[anything\nITEM: TIMESTEP\nanything] PASSED [ 42%] 609s fio/test_lammpsdump.py::test_lammpsdump_order PASSED [ 42%] 609s fio/test_lammpsdump.py::test_lammpsdump_element PASSED [ 42%] 609s fio/test_lammpsdump.py::test_lammpsdump_errors PASSED [ 42%] 609s fio/test_lammpsdump.py::test_lammpsdump_position_reading[xs ys zs-True] PASSED [ 42%] 609s fio/test_lammpsdump.py::test_lammpsdump_position_reading[xsu ysu zsu-True] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_position_reading[x y z-False] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_position_reading[xu yu zu-False] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[pp pp pp-expected0] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[ss mm ff-expected1] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[fs sm mf-expected2] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[sf ms ff-expected3] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[pp ms ff-expected4] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[ff pp ff-expected5] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[ff mm pp-expected6] PASSED [ 43%] 609s fio/test_lammpsdump.py::test_lammpsdump_bounds[pp ff pp-expected7] PASSED [ 43%] 609s fio/test_magmom.py::test_magmom PASSED [ 43%] 609s fio/test_magres.py::test_magres PASSED [ 43%] 609s fio/test_match_magic.py::test_match_magic PASSED [ 43%] 609s fio/test_mustem.py::test_mustem_several_elements PASSED [ 43%] 609s fio/test_mustem.py::test_mustem_single_elements PASSED [ 43%] 609s fio/test_netcdftrajectory.py::test_netcdftrajectory PASSED [ 43%] 610s fio/test_netcdftrajectory.py::test_netcdf_with_variable_atomic_numbers PASSED [ 43%] 610s fio/test_netcdftrajectory.py::test_netcdf_with_nonconsecutive_index PASSED [ 43%] 610s fio/test_netcdftrajectory.py::test_types_to_numbers_argument PASSED [ 44%] 610s fio/test_nomad.py::test_nomad PASSED [ 44%] 610s fio/test_nwchem.py::test_nwchem PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[abinit-in] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[abinit-out] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[acemolecule-input] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[acemolecule-out] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[aims] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[aims-output] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[bundletrajectory] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[castep-castep] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[castep-cell] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[castep-geom] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[castep-md] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[castep-phonon] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cfg] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cif] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cmdft] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cml] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cp2k-dcd] PASSED [ 44%] 610s fio/test_oi.py::test_ioformat[cp2k-restart] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[crystal] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[cube] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[dacapo-text] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[db] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[dlp-history] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[dlp4] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[elk] PASSED [ 45%] 610s fio/test_oi.py::test_ioformat[elk-in] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[eps] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[espresso-in] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[espresso-out] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[exciting] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[extxyz] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[findsym] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[gamess-us-in] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[gamess-us-out] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[gamess-us-punch] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[gaussian-in] PASSED [ 45%] 611s fio/test_oi.py::test_ioformat[gaussian-out] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gen] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gpaw-out] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gpumd] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gpw] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gromacs] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[gromos] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[html] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[json] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[jsv] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[lammps-dump-binary] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[lammps-dump-text] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[magres] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[mol] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[netcdftrajectory] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[nomad-json] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[nwchem-in] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[nwchem-out] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[octopus-in] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[png] PASSED [ 46%] 611s fio/test_oi.py::test_ioformat[pov] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[proteindatabank] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[py] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[qbox] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[res] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[rmc6f] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[sdf] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[siesta-xv] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[struct] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[struct_out] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[sys] PASSED [ 47%] 611s fio/test_oi.py::test_ioformat[traj] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[turbomole] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[turbomole-gradient] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[vasp] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[vasp-out] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[vasp-xdatcar] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[vasp-xml] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[wout] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[x3d] PASSED [ 47%] 612s fio/test_oi.py::test_ioformat[xsd] PASSED [ 48%] 612s fio/test_oi.py::test_ioformat[xsf] PASSED [ 48%] 612s fio/test_oi.py::test_ioformat[xtd] PASSED [ 48%] 612s fio/test_oi.py::test_ioformat[xyz] PASSED [ 48%] 612s fio/test_oldtraj.py::test_oldtraj PASSED [ 48%] 612s fio/test_openmx.py::test_openmx_out PASSED [ 48%] 612s fio/test_openmx.py::test_openmx_read_eigenvalues PASSED [ 48%] 612s fio/test_opls.py::test_opls_write_lammps PASSED [ 48%] 612s fio/test_parallel.py::test_parallel PASSED [ 48%] 612s fio/test_pdb_cell_io.py::test_pdb_cell_io PASSED [ 48%] 612s fio/test_pdb_extra.py::test_pdb_read PASSED [ 48%] 612s fio/test_pdb_extra.py::test_pdb_read_with_arrays PASSED [ 48%] 612s fio/test_pickle_bundle_trajectory.py::test_raises PASSED [ 48%] 612s fio/test_pickle_bundle_trajectory.py::test_write_read_pickle PASSED [ 48%] 612s fio/test_pickle_bundle_trajectory.py::test_write_read_bundle XFAIL (...) [ 48%] 612s fio/test_pickle_bundle_trajectory.py::test_append_pickle PASSED [ 48%] 612s fio/test_pickle_bundle_trajectory.py::test_append_bundle XFAIL (same...) [ 48%] 613s fio/test_pickle_bundle_trajectory.py::test_old_trajectory_conversion_utility PASSED [ 48%] 614s fio/test_pickle_bundle_trajectory.py::test_bundletrajectory_info PASSED [ 48%] 614s fio/test_povray.py::test_povray_io SKIPPED (povray not installed) [ 49%] 614s fio/test_povray.py::test_povray_highorder SKIPPED (povray not installed) [ 49%] 614s fio/test_povray.py::test_deprecated PASSED [ 49%] 614s fio/test_prismatic.py::test_write_read_cycle_xyz_prismatic PASSED [ 49%] 614s fio/test_prismatic.py::test_write_error PASSED [ 49%] 614s fio/test_pycodcif_read.py::test_pycodcif PASSED [ 49%] 614s fio/test_qbox.py::test_read_output PASSED [ 49%] 614s fio/test_qbox.py::test_format PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_readwrite_errors PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_with_at_in_ext PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_with_at_in_path PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_no_ext PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_with_at_no_ext PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_bad_slice PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_db_entry PASSED [ 49%] 614s fio/test_readwrite_errors.py::test_parse_filename_do_not_split PASSED [ 49%] 614s fio/test_res.py::test_res PASSED [ 49%] 614s fio/test_rmc6f.py::test_rmc6f_read PASSED [ 49%] 614s fio/test_rmc6f.py::test_rmc6f_write PASSED [ 49%] 614s fio/test_rmc6f.py::test_rmc6f_write_with_order PASSED [ 49%] 614s fio/test_rmc6f.py::test_rmc6f_write_with_triclinic_system PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_construct_regex PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_line_of_atoms_section_style_no_labels PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_line_of_atoms_section_style_labels PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_line_of_atoms_section_style_magnetic PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_process_rmc6f_lines_to_pos_and_cell PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_read_process_rmc6f_lines_to_pos_and_cell_padded_whitespace PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_write_output_column_format PASSED [ 50%] 614s fio/test_rmc6f.py::test_rmc6f_write_output PASSED [ 50%] 614s fio/test_siesta.py::test_read_struct_out PASSED [ 50%] 614s fio/test_siesta.py::test_read_fdf PASSED [ 50%] 614s fio/test_siesta.py::test_read_xv PASSED [ 50%] 614s fio/test_traj_bytesio.py::test_traj_bytesio PASSED [ 50%] 614s fio/test_trajectory.py::test_trajectory PASSED [ 50%] 614s fio/test_trajectory.py::test_append_nonexistent_file PASSED [ 50%] 614s fio/test_trajectory.py::test_only_energy PASSED [ 50%] 614s fio/test_trajectory.py::test_constraint_and_momenta PASSED [ 50%] 614s fio/test_trajectory_heterogeneous.py::test_trajectory_heterogeneous PASSED [ 50%] 614s fio/test_turbomole.py::test_turbomole PASSED [ 50%] 614s fio/test_ulm.py::test_open_anypathlike PASSED [ 50%] 614s fio/test_ulm.py::test_ulm PASSED [ 51%] 614s fio/test_ulm.py::test_append PASSED [ 51%] 614s fio/test_ulm.py::test_ulm_copy PASSED [ 51%] 614s fio/test_ulm_dummy.py::test_dummy_write PASSED [ 51%] 614s fio/test_v_sim.py::test_v_sim PASSED [ 51%] 614s fio/test_vasp_structure.py::TestXdatcarRoundtrip::test_roundtrip PASSED [ 51%] 614s fio/test_vasp_structure.py::TestXdatcarRoundtrip::test_roundtrip_single_atoms PASSED [ 51%] 614s fio/test_vasp_structure.py::TestXdatcarRoundtrip::test_typeerror PASSED [ 51%] 614s fio/test_vasp_structure.py::test_wrap PASSED [ 51%] 614s fio/test_wout.py::test_wout PASSED [ 51%] 614s fio/test_wout.py::test_wout_all PASSED [ 51%] 614s fio/test_xsd_bond.py::test_xsd_bond PASSED [ 51%] 614s fio/test_xsf_spec.py::test_xsf_spec PASSED [ 51%] 614s fio/test_xyz.py::test_single_write_and_read PASSED [ 51%] 614s fio/test_xyz.py::test_single_write_with_forces PASSED [ 51%] 614s fio/test_xyz.py::test_single_write_and_read_with_comment PASSED [ 51%] 614s fio/test_xyz.py::test_single_write_with_newline_comment[xyz] PASSED [ 51%] 614s fio/test_xyz.py::test_single_write_with_newline_comment[extxyz] PASSED [ 51%] 614s fio/test_xyz.py::test_multiple_write_and_read PASSED [ 51%] 615s forcefields/test_acn.py::test_acn PASSED [ 52%] 615s forcefields/test_aic.py::test_aic PASSED [ 52%] 615s forcefields/test_combine_mm.py::test_combine_mm PASSED [ 52%] 625s forcefields/test_combine_mm2.py::test_combine_mm2 PASSED [ 52%] 627s forcefields/test_counterions.py::test_counterions PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_buffer_mask PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs0] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs1] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs2] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs3] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs4] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs5] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs6] PASSED [ 52%] 627s forcefields/test_forceqmmm.py::test_qm_pbc[kwargs7] PASSED [ 52%] 628s forcefields/test_forceqmmm.py::test_rescaled_calculator PASSED [ 52%] 631s forcefields/test_forceqmmm.py::test_forceqmmm PASSED [ 52%] 632s forcefields/test_forceqmmm.py::test_export_xyz PASSED [ 52%] 632s forcefields/test_forceqmmm.py::test_set_masks_from_region PASSED [ 52%] 632s forcefields/test_forceqmmm.py::test_import_xyz PASSED [ 52%] 633s forcefields/test_qmmm.py::test_qmmm PASSED [ 52%] 633s forcefields/test_qmmm_acn.py::test_qmmm_acn PASSED [ 53%] 636s forcefields/test_rattle.py::test_rattle PASSED [ 53%] 636s forcefields/test_rattle_linear.py::test_rattle_linear PASSED [ 53%] 637s forcefields/test_tip4p.py::test_tip4p PASSED [ 53%] 637s forcefields/test_tipnp.py::test_tipnp PASSED [ 53%] 637s ga/test_add_candidates.py::test_add_candidates PASSED [ 53%] 642s ga/test_basic_example_main_run.py::test_basic_example_main_run[0] PASSED [ 53%] 647s ga/test_bulk_operators.py::test_bulk_operators[0] PASSED [ 53%] 647s ga/test_chain_operators.py::test_chain_operators[0] PASSED [ 53%] 647s ga/test_create_database.py::test_create_database PASSED [ 53%] 647s ga/test_cutandsplicepairing.py::test_cutandsplicepairing[0] PASSED [ 53%] 647s ga/test_database_logic.py::test_database_logic[0] PASSED [ 53%] 647s ga/test_element_operators.py::test_element_operators[0] PASSED [ 53%] 647s ga/test_film_operators.py::test_film_operators[0] PASSED [ 53%] 647s ga/test_mutations.py::test_mutations[0] PASSED [ 53%] 648s ga/test_particle_comparators.py::test_particle_comparators[0] PASSED [ 53%] 648s ga/test_particle_operators.py::test_particle_operators[0] PASSED [ 53%] 648s ga/test_slab_operators.py::test_cut_splice[0] PASSED [ 53%] 648s ga/test_slab_operators.py::test_random_composition_mutation[0] PASSED [ 53%] 648s ga/test_slab_operators.py::test_random_element_mutation[0] PASSED [ 53%] 648s ga/test_slab_operators.py::test_neighborhood_element_mutation[0] PASSED [ 54%] 648s ga/test_slab_operators.py::test_random_permutation[0] PASSED [ 54%] 648s ga/test_standardcomparator.py::test_standardcomparator PASSED [ 54%] 648s ga/test_utilities.py::test_utilities PASSED [ 54%] 648s gui/test_run.py::test_nanotube SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_nanoparticle SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_color SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_settings SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_rotate SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_open_and_save SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[None] SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[output.png] SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[output.eps] SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[output.pov] SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[output.traj] SKIPPED (no display) [ 54%] 648s gui/test_run.py::test_export_graphics[output.traj@0] SKIPPED (no dis...) 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spectrum/test_doscollection.py::TestDOSCollection::test_plot[None] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_slicing PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_collection_equality PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_equality_wrongtype[True] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_equality_wrongtype[1] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_equality_wrongtype[0.5] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_equality_wrongtype[string] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_equality_wrongtype[rawdos] PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_addition PASSED [ 63%] 733s spectrum/test_doscollection.py::TestDOSCollection::test_sample[options0] PASSED [ 63%] 733s 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spectrum/test_doscollection.py::TestDOSCollection::test_select[select_info3-select_query3-select_result3-select_not_result3-sum_by_result3] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestRawDOSCollection::test_init PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_init_errors PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_select PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_sequence PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_slicing PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_from_data[x0-weights0-info0-None] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_from_data[x1-weights1-info1-None] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_from_data[x2-weights2-None-IndexError] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_from_data[x3-weights3-None-IndexError] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_from_data[x4-weights4-None-IndexError] PASSED [ 64%] 733s spectrum/test_doscollection.py::TestGridDOSCollection::test_plot_no_resample PASSED [ 64%] 733s spectrum/test_dosdata.py::TestDosData::test_dosdata_init_info[None-expected0] PASSED [ 64%] 733s spectrum/test_dosdata.py::TestDosData::test_dosdata_init_info[info1-expected1] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_dosdata_init_info[info2-expected2] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_dosdata_init_info[notadict-TypeError] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_dosdata_init_info[False-TypeError] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_label_from_info[info0-] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_label_from_info[info1-key1: value1] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_label_from_info[info2-key1: value1; key2: value2] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_label_from_info[info3-xyz] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestDosData::test_label_from_info[info4-xyz] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_init PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_access PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_copy PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality_wrongtype[True] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality_wrongtype[1] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality_wrongtype[0.5] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality_wrongtype[string] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_10-data_20-True] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_11-data_21-False] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_12-data_22-False] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_13-data_23-False] PASSED [ 65%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_14-data_24-False] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_equality[data_15-data_25-False] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_addition PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling[data0-args0-result0] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling[data1-args1-result1] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling[data2-args2-result2] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling[data3-args3-result3] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling[data4-args4-result4] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sampling_error PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_sample_grid PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot[1] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot[5] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot[None] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot_deltas[1] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot_deltas[5] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestRawDosData::test_plot_deltas[None] PASSED [ 66%] 733s spectrum/test_dosdata.py::TestGridDosData::test_init PASSED [ 66%] 733s spectrum/test_dosdata.py::TestGridDosData::test_access PASSED [ 66%] 733s spectrum/test_dosdata.py::TestGridDosData::test_copy PASSED [ 66%] 733s spectrum/test_dosdata.py::TestGridDosData::test_addition PASSED [ 66%] 733s spectrum/test_dosdata.py::TestGridDosData::test_check_spacing PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_resampling_consistency PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_plot[1] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_plot[5] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_plot[None] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_plot_broad_dos PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_smearing_args_interpreter[inputs0-expected0] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_smearing_args_interpreter[inputs1-expected1] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_smearing_args_interpreter[inputs2-expected2] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestGridDosData::test_smearing_args_interpreter[inputs3-expected3] PASSED [ 67%] 733s spectrum/test_dosdata.py::TestMultiDosData::test_addition PASSED [ 67%] 733s standardization/test_properties.py::test_calc_properties PASSED [ 67%] 733s test_analysis.py::test_analysis PASSED [ 67%] 733s test_bader.py::test_bader PASSED [ 67%] 733s test_bandgap.py::test_bandgap PASSED [ 67%] 733s test_bandpath_kpts_axis.py::test_bandpath_kpts_axis PASSED [ 67%] 736s test_basin.py::test_basin PASSED [ 67%] 736s test_calc_outputs_big.py::test_properties_big PASSED [ 67%] 736s test_calc_properties.py::test_print_props[natoms] PASSED [ 67%] 736s test_calc_properties.py::test_print_props[energy] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[energies] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[free_energy] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[forces] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[stress] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[stresses] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[nbands] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[nkpts] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[nspins] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[fermi_level] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[kpoint_weights] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[ibz_kpoints] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[eigenvalues] PASSED [ 68%] 736s test_calc_properties.py::test_print_props[occupations] PASSED [ 68%] 736s test_calc_properties.py::test_props PASSED [ 68%] 736s test_calc_properties.py::test_props_set_twice PASSED [ 68%] 736s test_calc_properties.py::test_props_set_consistent PASSED [ 68%] 736s test_calc_properties.py::test_props_set_inconsistent PASSED [ 68%] 736s test_calc_properties.py::test_array_badvalue[val0] PASSED [ 68%] 736s test_calc_properties.py::test_array_badvalue[val1] PASSED [ 68%] 736s test_calc_properties.py::test_array_badtype[5] PASSED [ 69%] 736s test_calc_properties.py::test_array_good[val0] PASSED [ 69%] 736s test_calc_properties.py::test_array_good[val1] PASSED [ 69%] 736s test_calc_properties.py::test_array_good[val2] PASSED [ 69%] 736s test_calc_properties.py::test_float_badtype[val0] PASSED [ 69%] 736s test_calc_properties.py::test_float_badtype[val1] PASSED [ 69%] 736s test_calc_properties.py::test_float_badtype[val2] PASSED [ 69%] 736s test_calc_properties.py::test_float_badtype[1j] PASSED [ 69%] 736s test_calc_properties.py::test_float_badtype[None] PASSED [ 69%] 736s test_calc_properties.py::test_float_badvalue[hello] PASSED [ 69%] 736s test_calc_properties.py::test_float_good[4.0] PASSED [ 69%] 736s test_calc_properties.py::test_float_good[42] PASSED [ 69%] 736s test_calc_properties.py::test_float_good[nan] PASSED [ 69%] 736s test_calc_properties.py::test_float_good[42.0] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-None-1-1] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-None-1-1.0] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-None-1.0-1] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-None-1.0-1.0] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-0-1-1] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-0-1-1.0] PASSED [ 69%] 736s test_calculator_equal.py::test_single_value[None-0-1.0-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[None-0-1.0-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[None-1e-08-1-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[None-1e-08-1-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[None-1e-08-1.0-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[None-1e-08-1.0-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-None-1-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-None-1-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-None-1.0-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-None-1.0-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-0-1-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-0-1-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-0-1.0-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-0-1.0-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-1e-08-1-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-1e-08-1-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-1e-08-1.0-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[0-1e-08-1.0-1.0] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[1e-08-None-1-1] PASSED [ 70%] 736s test_calculator_equal.py::test_single_value[1e-08-None-1-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-None-1.0-1] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-None-1.0-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-0-1-1] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-0-1-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-0-1.0-1] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-0-1.0-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-1e-08-1-1] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-1e-08-1-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-1e-08-1.0-1] PASSED [ 71%] 736s test_calculator_equal.py::test_single_value[1e-08-1e-08-1.0-1.0] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b0-a0] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b0-a1] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b0-a2] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b0-a3] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b1-a0] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b1-a1] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b1-a2] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b1-a3] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b2-a0] PASSED [ 71%] 736s test_calculator_equal.py::test_array_equal[None-None-b2-a1] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b2-a2] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b2-a3] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b3-a0] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b3-a1] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b3-a2] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-None-b3-a3] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b0-a0] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b0-a1] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b0-a2] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b0-a3] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b1-a0] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b1-a1] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b1-a2] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b1-a3] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b2-a0] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b2-a1] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b2-a2] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b2-a3] PASSED [ 72%] 736s test_calculator_equal.py::test_array_equal[None-0-b3-a0] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-0-b3-a1] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-0-b3-a2] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-0-b3-a3] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b0-a0] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b0-a1] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b0-a2] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b0-a3] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b1-a0] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b1-a1] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b1-a2] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b1-a3] PASSED [ 73%] 736s test_calculator_equal.py::test_array_equal[None-1e-08-b2-a0] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b2-a1] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b2-a2] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b2-a3] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b3-a0] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b3-a1] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b3-a2] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[None-1e-08-b3-a3] PASSED [ 73%] 737s test_calculator_equal.py::test_array_equal[0-None-b0-a0] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b0-a1] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b0-a2] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b0-a3] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b1-a0] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b1-a1] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b1-a2] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b1-a3] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b2-a0] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b2-a1] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b2-a2] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b2-a3] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b3-a0] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b3-a1] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b3-a2] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-None-b3-a3] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-0-b0-a0] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-0-b0-a1] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-0-b0-a2] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-0-b0-a3] PASSED [ 74%] 737s test_calculator_equal.py::test_array_equal[0-0-b1-a0] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b1-a1] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b1-a2] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b1-a3] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b2-a0] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b2-a1] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b2-a2] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b2-a3] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b3-a0] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b3-a1] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b3-a2] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-0-b3-a3] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b0-a0] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b0-a1] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b0-a2] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b0-a3] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b1-a0] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b1-a1] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b1-a2] PASSED [ 75%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b1-a3] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b2-a0] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b2-a1] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b2-a2] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b2-a3] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b3-a0] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b3-a1] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b3-a2] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[0-1e-08-b3-a3] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b0-a0] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b0-a1] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b0-a2] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b0-a3] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b1-a0] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b1-a1] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b1-a2] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b1-a3] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b2-a0] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b2-a1] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b2-a2] PASSED [ 76%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b2-a3] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b3-a0] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b3-a1] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b3-a2] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-None-b3-a3] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b0-a0] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b0-a1] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b0-a2] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b0-a3] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b1-a0] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b1-a1] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b1-a2] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b1-a3] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b2-a0] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b2-a1] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b2-a2] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b2-a3] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b3-a0] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b3-a1] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b3-a2] PASSED [ 77%] 737s test_calculator_equal.py::test_array_equal[1e-08-0-b3-a3] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b0-a0] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b0-a1] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b0-a2] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b0-a3] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b1-a0] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b1-a1] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b1-a2] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b1-a3] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b2-a0] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b2-a1] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b2-a2] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b2-a3] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b3-a0] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b3-a1] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b3-a2] PASSED [ 78%] 737s test_calculator_equal.py::test_array_equal[1e-08-1e-08-b3-a3] PASSED [ 78%] 737s test_calculator_equal.py::test_array_almost_equal[None-2e-08-b0-a0] PASSED [ 78%] 737s test_calculator_equal.py::test_array_almost_equal[None-2e-08-b0-a1] PASSED [ 78%] 737s test_calculator_equal.py::test_array_almost_equal[None-2e-08-b1-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[None-2e-08-b1-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[0-2e-08-b0-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[0-2e-08-b0-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[0-2e-08-b1-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[0-2e-08-b1-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-None-b0-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-None-b0-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-None-b1-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-None-b1-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-0-b0-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-0-b0-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-0-b1-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[1e-08-0-b1-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[5e-09-1e-08-b0-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[5e-09-1e-08-b0-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[5e-09-1e-08-b1-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_almost_equal[5e-09-1e-08-b1-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_not_equal[None-None-b0-a0] PASSED [ 79%] 737s test_calculator_equal.py::test_array_not_equal[None-None-b0-a1] PASSED [ 79%] 737s test_calculator_equal.py::test_array_not_equal[None-None-b1-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-None-b1-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-0-b0-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-0-b0-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-0-b1-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-0-b1-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-1e-08-b0-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-1e-08-b0-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-1e-08-b1-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[None-1e-08-b1-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-None-b0-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-None-b0-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-None-b1-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-None-b1-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-0-b0-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-0-b0-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-0-b1-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-0-b1-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-1e-08-b0-a0] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-1e-08-b0-a1] PASSED [ 80%] 737s test_calculator_equal.py::test_array_not_equal[0-1e-08-b1-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[0-1e-08-b1-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-None-b0-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-None-b0-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-None-b1-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-None-b1-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-0-b0-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-0-b0-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-0-b1-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-0-b1-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-1e-08-b0-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-1e-08-b0-a1] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-1e-08-b1-a0] PASSED [ 81%] 737s test_calculator_equal.py::test_array_not_equal[1e-08-1e-08-b1-a1] PASSED [ 81%] 737s test_calculator_label.py::test_calculator_label PASSED [ 81%] 737s test_checkpoint.py::test_sqlite PASSED [ 81%] 737s test_checkpoint.py::test_new_style_interface PASSED [ 81%] 737s test_cluster.py::test_icosa[1] PASSED [ 81%] 737s test_cluster.py::test_icosa[2] PASSED [ 81%] 737s test_cluster.py::test_icosa[3] PASSED [ 82%] 737s test_cluster.py::test_icosa[4] PASSED [ 82%] 737s test_cluster.py::test_icosa[5] PASSED [ 82%] 738s test_cluster.py::test_icosa[6] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[1] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[2] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[3] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[4] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[5] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[6] PASSED [ 82%] 738s test_cluster.py::test_regular_octahedron[7] PASSED [ 82%] 738s test_cluster.py::test_cuboctahedron[1] PASSED [ 82%] 738s test_cluster.py::test_cuboctahedron[2] PASSED [ 82%] 738s test_cluster.py::test_cuboctahedron[3] PASSED [ 82%] 738s test_cluster.py::test_cuboctahedron[4] PASSED [ 82%] 738s test_cluster.py::test_cuboctahedron[5] PASSED [ 82%] 739s test_cluster.py::test_cuboctahedron[6] PASSED [ 82%] 739s test_cluster.py::test_decahedron PASSED [ 82%] 739s test_cluster.py::test_smallest_decahedron PASSED [ 82%] 739s test_cluster.py::test_centering[cluster0] PASSED [ 82%] 739s test_cluster.py::test_centering[cluster1] PASSED [ 83%] 739s test_cluster.py::test_centering[cluster2] PASSED [ 83%] 739s test_cutoffs.py::test_cutoffs PASSED [ 83%] 739s test_diffusion_coefficient.py::test_atom PASSED [ 83%] 739s test_diffusion_coefficient.py::test_co_molecule PASSED [ 83%] 739s test_dimensionality.py::test_mx2[TSA] PASSED [ 83%] 739s test_dimensionality.py::test_mx2[RDA] PASSED [ 83%] 739s test_dimensionality.py::test_fcc[TSA] PASSED [ 83%] 739s test_dimensionality.py::test_fcc[RDA] PASSED [ 83%] 739s test_dimensionality.py::test_isolation_0D[None] PASSED [ 83%] 739s test_dimensionality.py::test_isolation_0D[1.1] PASSED [ 83%] 739s test_dimensionality.py::test_isolation_1D PASSED [ 83%] 739s test_dimensionality.py::test_isolation_2D PASSED [ 83%] 740s test_dimensionality.py::test_isolation_3D PASSED [ 83%] 740s test_dimer.py::test_dimer PASSED [ 83%] 740s test_dimer_method.py::test_dimer_method PASSED [ 83%] 740s test_distance.py::test_distance PASSED [ 83%] 740s test_distmom.py::test_distmom PASSED [ 83%] 740s test_doctests.py::test_doctest[ase.atoms] PASSED [ 83%] 740s test_doctests.py::test_doctest[ase.build.tools] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.cell] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.collections.collection] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.dft.kpoints] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.eos] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.formula] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.geometry.cell] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.geometry.geometry] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.io.ulm] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.lattice] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.phasediagram] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.spacegroup.spacegroup] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.spacegroup.xtal] PASSED [ 84%] 740s test_doctests.py::test_doctest[ase.symbols] PASSED [ 84%] 741s test_dos.py::test_dos PASSED [ 84%] 742s test_eam.py::test_eam PASSED [ 84%] 742s test_eam_run.py::test_eam_run PASSED [ 84%] 742s test_eos.py::test_eos PASSED [ 84%] 742s test_example.py::test_example PASSED [ 84%] 742s test_external_viewer.py::test_view_ase PASSED [ 84%] 742s test_external_viewer.py::test_view_ase_via_cli PASSED [ 85%] 742s test_external_viewer.py::test_bad_viewer PASSED [ 85%] 742s test_external_viewer.py::test_py_viewer_mock PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer0] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer1] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer2] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer3] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer4] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_tempfile[viewer5] PASSED [ 85%] 742s test_external_viewer.py::test_cli_viewer_blocking PASSED [ 85%] 743s test_external_viewer.py::test_cli_viewer PASSED [ 85%] 743s test_filecache.py::test_basic PASSED [ 85%] 743s test_filecache.py::test_cache[dct0] PASSED [ 85%] 743s test_filecache.py::test_cache[dct1] PASSED [ 85%] 743s test_filecache.py::test_combine PASSED [ 85%] 743s test_filecache.py::test_split PASSED [ 85%] 743s test_filecache.py::test_lock PASSED [ 85%] 743s test_filecache.py::test_already_locked PASSED [ 85%] 743s test_filecache.py::test_no_overwrite_combine PASSED [ 85%] 743s test_forcecurve.py::test_forcecurve PASSED [ 85%] 743s test_formula.py::test_formula_things PASSED [ 86%] 743s test_formula.py::test_atoms_formula_things PASSED [ 86%] 743s test_formula.py::test_h0c1 PASSED [ 86%] 743s test_formula.py::test_formula PASSED [ 86%] 743s test_formula.py::test_convert PASSED [ 86%] 743s test_formula.py::test_formulas[H2O] PASSED [ 86%] 743s test_formula.py::test_formulas[10H2O] PASSED [ 86%] 743s test_formula.py::test_formulas[2(CuO2(H2O)2)10] PASSED [ 86%] 743s test_formula.py::test_formulas[Cu20+H2] PASSED [ 86%] 743s test_formula.py::test_formulas[HHHHHHHHHHHHHHH] PASSED [ 86%] 743s test_formula.py::test_formulas[AuBC2] PASSED [ 86%] 743s test_formula.py::test_formulas[] PASSED [ 86%] 744s test_geometry.py::test_geometry PASSED [ 86%] 744s test_geometry_derivatives.py::test_atoms_angle PASSED [ 86%] 745s test_hcp.py::test_hcp PASSED [ 86%] 745s test_imports.py::test_imports PASSED [ 86%] 745s test_isotopes.py::test_isotopes PASSED [ 86%] 745s test_issue276.py::test_issue276 PASSED [ 86%] 745s test_kpts.py::test_kpts PASSED [ 86%] 745s test_kpts2kpts.py::test_kpts2kpts[lat0] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat1] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat2] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat3] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat4] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat5] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat6] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat7] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat8] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat9] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat10] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat11] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat12] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat13] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat14] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat15] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat16] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat17] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat18] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat19] PASSED [ 87%] 745s test_kpts2kpts.py::test_kpts2kpts[lat20] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat21] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat22] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat23] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat24] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat25] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat26] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat27] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat28] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat29] PASSED [ 88%] 745s test_kpts2kpts.py::test_kpts2kpts[lat30] PASSED [ 88%] 745s test_lattice_lindep.py::test_miller_lindep PASSED [ 88%] 745s test_lattice_lindep.py::test_fcc_ok PASSED [ 88%] 745s test_lattice_lindep.py::test_fcc_directions_linearly_dependent[directions0] PASSED [ 88%] 745s test_lattice_lindep.py::test_fcc_directions_linearly_dependent[directions1] PASSED [ 88%] 745s test_lattice_lindep.py::test_fcc_directions_ok PASSED [ 88%] 745s test_lattice_lindep.py::test_hcp_miller_lienarly_dependent PASSED [ 88%] 745s test_lattice_lindep.py::test_hcp_cell_linearly_dependent PASSED [ 88%] 745s test_lattice_lindep.py::test_hcp PASSED [ 88%] 745s test_linesearch_maxstep.py::test_linesearch[BFGS-BFGS] PASSED [ 88%] 745s test_linesearch_maxstep.py::test_linesearch[BFGSLineSearch-BFGSLineSearch] PASSED [ 89%] 746s test_linesearch_maxstep.py::test_linesearch[PreconLBFGS-PreconLBFGS_Armijo] PASSED [ 89%] 746s test_linesearch_maxstep.py::test_linesearch[PreconLBFGS-PreconLBFGS_Wolff] 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[ 96%] 755s test_xrdebye.py::test_get PASSED [ 97%] 755s test_xrdebye.py::test_xrd PASSED [ 97%] 756s test_xrdebye.py::test_saxs_and_files PASSED [ 97%] 756s test_xwopen.py::test_xwopen PASSED [ 97%] 756s test_xwopen.py::test_xwopen_locked PASSED [ 97%] 756s test_xwopen.py::test_xwopen_fail PASSED [ 97%] 756s test_zmatrix.py::test_zmatrix_diborane[b;h 1 1.31;h 1 1.31 2 97;b 2 1.31 1 83 3 0;h 1 1.19 4 120 2 90;h 1 1.19 4 120 3 90;h 4 1.19 1 120 2 90;h 4 1.19 1 120 3 90-None] PASSED [ 97%] 756s test_zmatrix.py::test_zmatrix_diborane[zmat1-defs1] PASSED [ 97%] 756s test_zmatrix.py::test_zmatrix_diborane[B\nH 1 rBH1\nH 1 rBH1 2 aHBH1\nB 1 rBB 2 aBBH 3 0\nH 1 rBH2 4 aHBH2 2 dHBBH\nH 1 rBH2 4 aHBH2 3 dHBBH\nH 4 rBH2 1 aHBH2 2 dHBBH\nH 4 rBH2 1 aHBH2 3 dHBBH-rBH1 1.31\nrBH2 1.19\nrBB 1.736\naHBH1 97\naHBH2 120\naBBH 48.5\ndHBBH 90] PASSED [ 97%] 756s test_zmatrix.py::test_zmatrix_diborane[zmat3-defs3] PASSED [ 97%] 758s transport/test_transport_calculator.py::test_transport_calculator PASSED 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vibrations/test_vib.py::TestVibrationsData::test_zero_mass PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_new_mass PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_fixed_atoms PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_dos PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_pdos PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_todict PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_dict_roundtrip PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_dict_indices[indices0-expected_mask0] PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_dict_indices[None-expected_mask1] PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_jmol_roundtrip PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_bad_hessian PASSED [ 99%] 760s vibrations/test_vib.py::TestVibrationsData::test_bad_hessian2d PASSED [ 99%] 760s vibrations/test_vib.py::TestSlab::test_vibration_on_surface PASSED [ 99%] 760s vibrations/test_vibrations_example.py::test_vibrations_example PASSED [100%] 760s 760s =============================== warnings summary =============================== 760s conftest.py:31 760s /usr/lib/python3/dist-packages/ase/test/conftest.py:31: PytestRemovedIn9Warning: The (startdir: py.path.local) argument is deprecated, please use (start_path: pathlib.Path) 760s see https://docs.pytest.org/en/latest/deprecations.html#py-path-local-arguments-for-hooks-replaced-with-pathlib-path 760s def pytest_report_header(config, startdir): 760s 760s ../atoms.py:1205: 1 warning 760s atoms/test_atom_scaled_pos.py: 3 warnings 760s atoms/test_get_angles.py: 3 warnings 760s build_/test_bulk.py: 1 warning 760s build_/test_surface.py: 2 warnings 760s calculator/vasp/test_vasp_input.py: 14 warnings 760s constraints/test_repeat_FixAtoms.py: 4 warnings 760s fio/test_cif.py: 1 warning 760s fio/test_extxyz.py: 6 warnings 760s fio/test_pickle_bundle_trajectory.py: 6 warnings 760s fio/test_trajectory_heterogeneous.py: 2 warnings 760s forcefields/test_forceqmmm.py: 27 warnings 760s ga/test_basic_example_main_run.py: 6 warnings 760s ga/test_bulk_operators.py: 14 warnings 760s ga/test_chain_operators.py: 12 warnings 760s ga/test_cutandsplicepairing.py: 2 warnings 760s ga/test_database_logic.py: 32 warnings 760s ga/test_film_operators.py: 3 warnings 760s ga/test_mutations.py: 1 warning 760s md/test_ce_logging.py: 1 warning 760s md/test_ce_potentiostat.py: 1 warning 760s md/test_idealgas.py: 1 warning 760s md/test_langevin_switching.py: 1 warning 760s neb/test_COCu111.py: 1 warning 760s neb/test_COCu111_2.py: 1 warning 760s neighbor/test_neighbor.py: 17 warnings 760s neighbor/test_neighbor_kernel.py: 8 warnings 760s optimize/test_optimizers.py: 15 warnings 760s precon/test_amin.py: 1 warning 760s precon/test_lbfgs.py: 1 warning 760s precon/test_precon_assembly.py: 36 warnings 760s precon/test_unitcellfilter.py: 1 warning 760s test_dimensionality.py: 3 warnings 760s test_doctests.py: 7 warnings 760s test_external_viewer.py: 1 warning 760s test_forcecurve.py: 1 warning 760s test_geometry.py: 8 warnings 760s test_springcalc.py: 1 warning 760s test_structure_comparator.py: 70 warnings 760s test_things.py: 1 warning 760s vibrations/test_bond_polarizability_raman.py: 3 warnings 760s /usr/lib/python3/dist-packages/ase/atoms.py:1205: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= rep 760s 760s :488 760s :488: RuntimeWarning: numpy.ndarray size changed, may indicate binary incompatibility. Expected 8 from C header, got 48 from PyObject 760s 760s build_/test_surface.py: 2 warnings 760s build_/test_surface_terminations.py: 17 warnings 760s /usr/lib/python3/dist-packages/ase/build/general_surface.py:77: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s surf *= (1, 1, layers) 760s 760s build_/test_surface_terminations.py::test_surface_terminations 760s /usr/lib/python3/dist-packages/ase/test/build_/test_surface_terminations.py:14: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s slb *= (1, 2, 1) 760s 760s calculator/turbomole/test_turbomole_2h2o.py::test_turbomole_2h2o 760s /usr/lib/python3/dist-packages/ase/io/jsonio.py:42: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 760s def object_hook(dct): 760s Enable tracemalloc to get traceback where the object was allocated. 760s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 760s 760s constraints/test_parameteric_constr.py: 67 warnings 760s fio/test_aims_io.py: 66 warnings 760s test_parsemath.py: 108 warnings 760s /usr/lib/python3/dist-packages/ase/utils/parsemath.py:146: DeprecationWarning: ast.Num is deprecated and will be removed in Python 3.14; use ast.Constant instead 760s if isinstance(node, ast.Num): # 760s 760s constraints/test_parameteric_constr.py: 64 warnings 760s fio/test_aims_io.py: 45 warnings 760s test_parsemath.py: 50 warnings 760s /usr/lib/python3/dist-packages/ase/utils/parsemath.py:147: DeprecationWarning: Attribute n is deprecated and will be removed in Python 3.14; use value instead 760s return node.n 760s 760s emt/test_emt_stress.py::test_emt_stress 760s /usr/lib/python3/dist-packages/ase/test/emt/test_emt_stress.py:13: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s a *= (1, 2, 3) 760s 760s fio/test_oi.py: 80 warnings 760s /usr/lib/python3/dist-packages/ase/test/fio/test_oi.py:33: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (2, 1, 1) 760s 760s fio/test_v_sim.py::test_v_sim 760s /usr/lib/python3/dist-packages/ase/utils/__init__.py:486: DeprecationWarning: `alltrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `all` instead. 760s obj = func(fd, *args, **kwargs) 760s 760s ga/test_add_candidates.py::test_add_candidates 760s /usr/lib/python3/dist-packages/ase/db/sqlite.py:370: ResourceWarning: unclosed file <_io.FileIO name='/dev/null' mode='wb' closefd=True> 760s [(key, id) for key in key_value_pairs]) 760s Enable tracemalloc to get traceback where the object was allocated. 760s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 760s 760s ga/test_database_logic.py::test_database_logic[0] 760s /usr/lib/python3/dist-packages/numpy/core/_ufunc_config.py:462: ResourceWarning: unclosed file <_io.TextIOWrapper name='/dev/null' mode='w' encoding='UTF-8'> 760s token = NO_NEP50_WARNING.set(True) 760s Enable tracemalloc to get traceback where the object was allocated. 760s See https://docs.pytest.org/en/stable/how-to/capture-warnings.html#resource-warnings for more info. 760s 760s md/test_md.py::test_md 760s /usr/lib/python3/dist-packages/ase/test/md/test_md.py:13: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s fcc *= (2, 1, 1) 760s 760s neb/test_precon_neb.py::test_neb_methods[aseneb-BFGS-None-None] 760s /usr/lib/python3/dist-packages/ase/test/neb/test_precon_neb.py:26: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s initial *= N_cell 760s 760s neb/test_shared_calculator_neb.py::TestNEB::test_deprecations 760s neb/test_shared_calculator_neb.py::TestNEB::test_deprecations 760s neb/test_shared_calculator_neb.py::TestNEB::test_deprecations 760s neb/test_shared_calculator_neb.py::TestNEB::test_deprecations 760s /usr/lib/python3/dist-packages/ase/neb.py:156: RuntimeWarning: invalid value encountered in divide 760s factor = tangent / tangent_mag 760s 760s neighbor/test_neighbor.py::test_small_cell_and_large_cutoff 760s /usr/lib/python3/dist-packages/ase/test/neighbor/test_neighbor.py:193: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (2, 2, 2) 760s 760s optimize/test_fire.py::test_fire 760s /usr/lib/python3/dist-packages/ase/test/optimize/test_fire.py:12: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s a *= (2, 2, 2) 760s 760s optimize/test_fire.py::test_fire 760s /usr/lib/python3/dist-packages/ase/test/optimize/test_fire.py:24: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s a *= (2, 2, 2) 760s 760s optimize/test_replay.py::test_replay 760s /usr/lib/python3/dist-packages/ase/test/optimize/test_replay.py:17: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s a *= (2, 2, 1) # 2x2 (100) surface-cell 760s 760s precon/test_lbfgs.py::test_preconlbfgs 760s /usr/lib/python3/dist-packages/ase/test/precon/test_lbfgs.py:15: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s a0 *= (N, N, N) 760s 760s test_basin.py::test_basin 760s /usr/lib/python3/dist-packages/ase/optimize/basin.py:71: DeprecationWarning: `sometrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `any` instead. 760s self.Emin = self.get_energy(self.atoms.get_positions()) or 1.e32 760s 760s test_basin.py::test_basin 760s /usr/lib/python3/dist-packages/ase/optimize/basin.py:81: DeprecationWarning: `sometrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `any` instead. 760s Eo = self.get_energy(ro) 760s 760s test_basin.py: 10 warnings 760s /usr/lib/python3/dist-packages/ase/optimize/basin.py:87: DeprecationWarning: `sometrue` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `any` instead. 760s En = self.get_energy(rn) 760s 760s test_dimensionality.py::test_mx2[TSA] 760s test_dimensionality.py::test_mx2[RDA] 760s /usr/lib/python3/dist-packages/ase/test/test_dimensionality.py:14: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= 2 760s 760s test_dimensionality.py::test_isolation_2D 760s /usr/lib/python3/dist-packages/ase/test/test_dimensionality.py:80: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= 2 760s 760s test_doctests.py::test_doctest[ase.phasediagram] 760s test_pourbaix.py::test_pourbaix 760s /usr/lib/python3/dist-packages/ase/phasediagram.py:253: OptimizeWarning: Unrecognized options detected: {'lstsq': True}. These will be passed to HiGHS verbatim. 760s result = linprog(c=energies, 760s 760s test_geometry_derivatives.py: 21 warnings 760s /usr/lib/python3/dist-packages/ase/test/test_geometry_derivatives.py:42: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 760s derivs[i, j] = (plus - minus) / (2 * epsilon) 760s 760s test_potential_energies.py::test_potential_energies 760s /usr/lib/python3/dist-packages/ase/test/test_potential_energies.py:10: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (2, 2, 2) 760s 760s test_root_surf.py::test_root_surf 760s test_root_surf.py::test_root_surf 760s test_root_surf.py::test_root_surf 760s test_root_surf.py::test_root_surf 760s test_root_surf.py::test_root_surf 760s test_root_surf.py::test_root_surf 760s /usr/lib/python3/dist-packages/ase/build/root.py:172: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (root, root, 1) 760s 760s test_root_surf.py::test_root_surf 760s /usr/lib/python3/dist-packages/ase/build/root.py:35: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (size[0], size[1], 1) 760s 760s test_root_surf.py::test_root_surf 760s /usr/lib/python3/dist-packages/ase/build/root.py:52: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (size[0], size[1], 1) 760s 760s test_root_surf.py::test_root_surf 760s /usr/lib/python3/dist-packages/ase/build/root.py:19: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (size[0], size[1], 1) 760s 760s test_stress.py::test_stress 760s /usr/lib/python3/dist-packages/ase/test/test_stress.py:45: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s atoms *= (1, 2, 3) 760s 760s test_structure_comparator.py::test_supercell_w_periodic_atom_removed 760s /usr/lib/python3/dist-packages/ase/test/test_structure_comparator.py:294: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 760s s1 *= (2, 1, 1) 760s 760s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 760s = 1659 passed, 300 skipped, 3 xfailed, 1 xpassed, 888 warnings in 246.41s (0:04:06) = 763s autopkgtest [04:47:28]: test command1: -----------------------] 767s autopkgtest [04:47:32]: test command1: - - - - - - - - - - results - - - - - - - - - - 767s command1 PASS 771s autopkgtest [04:47:36]: @@@@@@@@@@@@@@@@@@@@ summary 771s command1 PASS