0s autopkgtest [19:30:59]: starting date and time: 2024-06-28 19:30:59+0000 0s autopkgtest [19:30:59]: git checkout: 85adf9a1 setup-testbed: prevent /tmp from getting a tmpfs mount 0s autopkgtest [19:30:59]: host juju-7f2275-prod-proposed-migration-environment-9; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.yj3kjgel/out --timeout-copy=6000 --setup-commands 'ln -s /dev/null /etc/systemd/system/bluetooth.service; printf "http_proxy=http://squid.internal:3128\nhttps_proxy=http://squid.internal:3128\nno_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com\n" >> /etc/environment' --apt-pocket=proposed=src:glibc --apt-upgrade elkcode --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.39-3.1ubuntu2 -- lxd -r lxd-armhf-10.145.243.21 lxd-armhf-10.145.243.21:autopkgtest/ubuntu/oracular/armhf 26s autopkgtest [19:31:25]: testbed dpkg architecture: armhf 28s autopkgtest [19:31:27]: testbed apt version: 2.9.5 28s autopkgtest [19:31:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 36s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 37s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [377 kB] 37s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 37s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 37s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [50.1 kB] 37s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf Packages [71.0 kB] 37s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted armhf Packages [1368 B] 37s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe armhf Packages [334 kB] 37s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse armhf Packages [1768 B] 37s Fetched 955 kB in 1s (1067 kB/s) 37s Reading package lists... 55s tee: /proc/self/fd/2: Permission denied 77s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 77s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 79s Reading package lists... 79s Reading package lists... 79s Building dependency tree... 79s Reading state information... 81s Calculating upgrade... 82s The following packages will be upgraded: 82s base-files libc-bin libc6 locales motd-news-config 82s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Need to get 7652 kB of archives. 82s After this operation, 19.5 kB of additional disk space will be used. 82s Get:1 http://ftpmaster.internal/ubuntu oracular/main armhf motd-news-config all 13.3ubuntu2 [5416 B] 82s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf base-files armhf 13.3ubuntu2 [75.0 kB] 82s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf libc6 armhf 2.39-3.1ubuntu2 [2824 kB] 82s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf libc-bin armhf 2.39-3.1ubuntu2 [528 kB] 82s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main armhf locales all 2.39-3.1ubuntu2 [4220 kB] 83s Preconfiguring packages ... 83s Fetched 7652 kB in 1s (8789 kB/s) 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58369 files and directories currently installed.) 84s Preparing to unpack .../motd-news-config_13.3ubuntu2_all.deb ... 84s Unpacking motd-news-config (13.3ubuntu2) over (13.1ubuntu1) ... 84s Preparing to unpack .../base-files_13.3ubuntu2_armhf.deb ... 84s Unpacking base-files (13.3ubuntu2) over (13.1ubuntu1) ... 84s Setting up base-files (13.3ubuntu2) ... 84s Updating /etc/profile to current default. 85s motd-news.service is a disabled or a static unit not running, not starting it. 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58374 files and directories currently installed.) 85s Preparing to unpack .../libc6_2.39-3.1ubuntu2_armhf.deb ... 86s Unpacking libc6:armhf (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ... 86s Setting up libc6:armhf (2.39-3.1ubuntu2) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58374 files and directories currently installed.) 87s Preparing to unpack .../libc-bin_2.39-3.1ubuntu2_armhf.deb ... 87s Unpacking libc-bin (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ... 87s Setting up libc-bin (2.39-3.1ubuntu2) ... 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58374 files and directories currently installed.) 87s Preparing to unpack .../locales_2.39-3.1ubuntu2_all.deb ... 87s Unpacking locales (2.39-3.1ubuntu2) over (2.39-0ubuntu9) ... 88s Setting up motd-news-config (13.3ubuntu2) ... 88s Setting up locales (2.39-3.1ubuntu2) ... 90s Generating locales (this might take a while)... 93s en_US.UTF-8... done 93s Generation complete. 93s Processing triggers for plymouth-theme-ubuntu-text (24.004.60-1ubuntu7) ... 93s update-initramfs: deferring update (trigger activated) 93s Processing triggers for install-info (7.1-3build2) ... 94s Processing triggers for man-db (2.12.1-2) ... 96s Processing triggers for initramfs-tools (0.142ubuntu28) ... 98s Reading package lists... 99s Building dependency tree... 99s Reading state information... 101s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s autopkgtest [19:32:45]: rebooting testbed after setup commands that affected boot 178s autopkgtest [19:33:57]: testbed running kernel: Linux 6.5.0-41-generic #41~22.04.2-Ubuntu SMP PREEMPT_DYNAMIC Mon Jun 3 16:28:24 UTC 2 206s autopkgtest [19:34:25]: @@@@@@@@@@@@@@@@@@@@ apt-source elkcode 217s Get:1 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (dsc) [2187 B] 217s Get:2 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (tar) [3299 kB] 217s Get:3 http://ftpmaster.internal/ubuntu oracular/universe elkcode 9.2.12-1build2 (diff) [10.4 kB] 217s gpgv: Signature made Mon Apr 1 05:45:40 2024 UTC 217s gpgv: using RSA key A089FB36AAFBDAD5ACC1325069F790171A210984 217s gpgv: Can't check signature: No public key 217s dpkg-source: warning: cannot verify inline signature for ./elkcode_9.2.12-1build2.dsc: no acceptable signature found 217s autopkgtest [19:34:36]: testing package elkcode version 9.2.12-1build2 220s autopkgtest [19:34:39]: build not needed 222s autopkgtest [19:34:41]: test testsuite.sh: preparing testbed 237s Reading package lists... 238s Building dependency tree... 238s Reading state information... 239s Starting pkgProblemResolver with broken count: 0 239s Starting 2 pkgProblemResolver with broken count: 0 239s Done 241s The following additional packages will be installed: 241s elk-lapw libblas3 libevent-pthreads-2.1-7t64 libfabric1 libfftw3-double3 241s libfftw3-single3 libgfortran5 libgomp1 libhwloc-plugins libhwloc15 241s liblapack3 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 librdmacm1t64 241s libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1 openmpi-bin 241s openmpi-common 241s Suggested packages: 241s gnuplot xcrysden libfftw3-bin libfftw3-dev opencl-icd gfortran 241s | fortran-compiler 241s The following NEW packages will be installed: 241s autopkgtest-satdep elk-lapw libblas3 libevent-pthreads-2.1-7t64 libfabric1 241s libfftw3-double3 libfftw3-single3 libgfortran5 libgomp1 libhwloc-plugins 241s libhwloc15 liblapack3 libmunge2 libopenmpi3t64 libpciaccess0 libpmix2t64 241s librdmacm1t64 libxc9 libxnvctrl0 mpi-default-bin ocl-icd-libopencl1 241s openmpi-bin openmpi-common 241s 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. 241s Need to get 14.8 MB/14.8 MB of archives. 241s After this operation, 32.4 MB of additional disk space will be used. 241s Get:1 /tmp/autopkgtest.wYwZA4/1-autopkgtest-satdep.deb autopkgtest-satdep armhf 0 [708 B] 241s Get:2 http://ftpmaster.internal/ubuntu oracular/main armhf libblas3 armhf 3.12.0-3build1 [123 kB] 241s Get:3 http://ftpmaster.internal/ubuntu oracular/main armhf libgomp1 armhf 14.1.0-1ubuntu1 [125 kB] 241s Get:4 http://ftpmaster.internal/ubuntu oracular/main armhf libfftw3-double3 armhf 3.3.10-1ubuntu3 [369 kB] 241s Get:5 http://ftpmaster.internal/ubuntu oracular/main armhf libfftw3-single3 armhf 3.3.10-1ubuntu3 [376 kB] 241s Get:6 http://ftpmaster.internal/ubuntu oracular/main armhf libgfortran5 armhf 14.1.0-1ubuntu1 [311 kB] 241s Get:7 http://ftpmaster.internal/ubuntu oracular/main armhf liblapack3 armhf 3.12.0-3build1 [2085 kB] 242s Get:8 http://ftpmaster.internal/ubuntu oracular/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-10 [7530 B] 242s Get:9 http://ftpmaster.internal/ubuntu oracular/main armhf librdmacm1t64 armhf 50.0-2build2 [63.0 kB] 242s Get:10 http://ftpmaster.internal/ubuntu oracular/universe armhf libfabric1 armhf 1.17.0-3build2 [419 kB] 242s Get:11 http://ftpmaster.internal/ubuntu oracular/universe armhf libhwloc15 armhf 2.10.0-1build1 [146 kB] 242s Get:12 http://ftpmaster.internal/ubuntu oracular/universe armhf libmunge2 armhf 0.5.15-4build1 [17.1 kB] 242s Get:13 http://ftpmaster.internal/ubuntu oracular/main armhf libpciaccess0 armhf 0.17-3build1 [16.3 kB] 242s Get:14 http://ftpmaster.internal/ubuntu oracular/main armhf libxnvctrl0 armhf 510.47.03-0ubuntu4 [11.6 kB] 242s Get:15 http://ftpmaster.internal/ubuntu oracular/universe armhf ocl-icd-libopencl1 armhf 2.3.2-1build1 [34.5 kB] 242s Get:16 http://ftpmaster.internal/ubuntu oracular/universe armhf libhwloc-plugins armhf 2.10.0-1build1 [13.7 kB] 242s Get:17 http://ftpmaster.internal/ubuntu oracular/universe armhf libpmix2t64 armhf 5.0.1-4.1build1 [616 kB] 242s Get:18 http://ftpmaster.internal/ubuntu oracular/universe armhf libopenmpi3t64 armhf 4.1.6-7ubuntu2 [2041 kB] 242s Get:19 http://ftpmaster.internal/ubuntu oracular/universe armhf libxc9 armhf 5.2.3-1ubuntu1 [3933 kB] 242s Get:20 http://ftpmaster.internal/ubuntu oracular/universe armhf openmpi-common all 4.1.6-7ubuntu2 [170 kB] 242s Get:21 http://ftpmaster.internal/ubuntu oracular/universe armhf openmpi-bin armhf 4.1.6-7ubuntu2 [83.2 kB] 242s Get:22 http://ftpmaster.internal/ubuntu oracular/universe armhf mpi-default-bin armhf 1.15build1 [2376 B] 242s Get:23 http://ftpmaster.internal/ubuntu oracular/universe armhf elk-lapw armhf 9.2.12-1build2 [3845 kB] 243s Fetched 14.8 MB in 1s (10.9 MB/s) 243s Selecting previously unselected package libblas3:armhf. 243s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 58374 files and directories currently installed.) 243s Preparing to unpack .../00-libblas3_3.12.0-3build1_armhf.deb ... 243s Unpacking libblas3:armhf (3.12.0-3build1) ... 243s Selecting previously unselected package libgomp1:armhf. 243s Preparing to unpack .../01-libgomp1_14.1.0-1ubuntu1_armhf.deb ... 243s Unpacking libgomp1:armhf (14.1.0-1ubuntu1) ... 243s Selecting previously unselected package libfftw3-double3:armhf. 243s Preparing to unpack .../02-libfftw3-double3_3.3.10-1ubuntu3_armhf.deb ... 243s Unpacking libfftw3-double3:armhf (3.3.10-1ubuntu3) ... 243s Selecting previously unselected package libfftw3-single3:armhf. 243s Preparing to unpack .../03-libfftw3-single3_3.3.10-1ubuntu3_armhf.deb ... 243s Unpacking libfftw3-single3:armhf (3.3.10-1ubuntu3) ... 243s Selecting previously unselected package libgfortran5:armhf. 243s Preparing to unpack .../04-libgfortran5_14.1.0-1ubuntu1_armhf.deb ... 243s Unpacking libgfortran5:armhf (14.1.0-1ubuntu1) ... 243s Selecting previously unselected package liblapack3:armhf. 244s Preparing to unpack .../05-liblapack3_3.12.0-3build1_armhf.deb ... 244s Unpacking liblapack3:armhf (3.12.0-3build1) ... 244s Selecting previously unselected package libevent-pthreads-2.1-7t64:armhf. 244s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_armhf.deb ... 244s Unpacking libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-10) ... 244s Selecting previously unselected package librdmacm1t64:armhf. 244s Preparing to unpack .../07-librdmacm1t64_50.0-2build2_armhf.deb ... 244s Unpacking librdmacm1t64:armhf (50.0-2build2) ... 244s Selecting previously unselected package libfabric1:armhf. 244s Preparing to unpack .../08-libfabric1_1.17.0-3build2_armhf.deb ... 244s Unpacking libfabric1:armhf (1.17.0-3build2) ... 244s Selecting previously unselected package libhwloc15:armhf. 244s Preparing to unpack .../09-libhwloc15_2.10.0-1build1_armhf.deb ... 244s Unpacking libhwloc15:armhf (2.10.0-1build1) ... 244s Selecting previously unselected package libmunge2:armhf. 244s Preparing to unpack .../10-libmunge2_0.5.15-4build1_armhf.deb ... 244s Unpacking libmunge2:armhf (0.5.15-4build1) ... 244s Selecting previously unselected package libpciaccess0:armhf. 244s Preparing to unpack .../11-libpciaccess0_0.17-3build1_armhf.deb ... 244s Unpacking libpciaccess0:armhf (0.17-3build1) ... 244s Selecting previously unselected package libxnvctrl0:armhf. 244s Preparing to unpack .../12-libxnvctrl0_510.47.03-0ubuntu4_armhf.deb ... 244s Unpacking libxnvctrl0:armhf (510.47.03-0ubuntu4) ... 244s Selecting previously unselected package ocl-icd-libopencl1:armhf. 244s Preparing to unpack .../13-ocl-icd-libopencl1_2.3.2-1build1_armhf.deb ... 244s Unpacking ocl-icd-libopencl1:armhf (2.3.2-1build1) ... 244s Selecting previously unselected package libhwloc-plugins:armhf. 244s Preparing to unpack .../14-libhwloc-plugins_2.10.0-1build1_armhf.deb ... 244s Unpacking libhwloc-plugins:armhf (2.10.0-1build1) ... 244s Selecting previously unselected package libpmix2t64:armhf. 244s Preparing to unpack .../15-libpmix2t64_5.0.1-4.1build1_armhf.deb ... 244s Unpacking libpmix2t64:armhf (5.0.1-4.1build1) ... 244s Selecting previously unselected package libopenmpi3t64:armhf. 244s Preparing to unpack .../16-libopenmpi3t64_4.1.6-7ubuntu2_armhf.deb ... 244s Unpacking libopenmpi3t64:armhf (4.1.6-7ubuntu2) ... 244s Selecting previously unselected package libxc9:armhf. 245s Preparing to unpack .../17-libxc9_5.2.3-1ubuntu1_armhf.deb ... 245s Unpacking libxc9:armhf (5.2.3-1ubuntu1) ... 245s Selecting previously unselected package openmpi-common. 245s Preparing to unpack .../18-openmpi-common_4.1.6-7ubuntu2_all.deb ... 245s Unpacking openmpi-common (4.1.6-7ubuntu2) ... 245s Selecting previously unselected package openmpi-bin. 245s Preparing to unpack .../19-openmpi-bin_4.1.6-7ubuntu2_armhf.deb ... 245s Unpacking openmpi-bin (4.1.6-7ubuntu2) ... 245s Selecting previously unselected package mpi-default-bin. 245s Preparing to unpack .../20-mpi-default-bin_1.15build1_armhf.deb ... 245s Unpacking mpi-default-bin (1.15build1) ... 245s Selecting previously unselected package elk-lapw. 245s Preparing to unpack .../21-elk-lapw_9.2.12-1build2_armhf.deb ... 245s Unpacking elk-lapw (9.2.12-1build2) ... 245s Selecting previously unselected package autopkgtest-satdep. 245s Preparing to unpack .../22-1-autopkgtest-satdep.deb ... 245s Unpacking autopkgtest-satdep (0) ... 245s Setting up libpciaccess0:armhf (0.17-3build1) ... 245s Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-10) ... 245s Setting up libgomp1:armhf (14.1.0-1ubuntu1) ... 245s Setting up libxnvctrl0:armhf (510.47.03-0ubuntu4) ... 245s Setting up libblas3:armhf (3.12.0-3build1) ... 245s update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode 245s Setting up libmunge2:armhf (0.5.15-4build1) ... 245s Setting up libhwloc15:armhf (2.10.0-1build1) ... 245s Setting up libfftw3-double3:armhf (3.3.10-1ubuntu3) ... 245s Setting up libgfortran5:armhf (14.1.0-1ubuntu1) ... 245s Setting up ocl-icd-libopencl1:armhf (2.3.2-1build1) ... 245s Setting up openmpi-common (4.1.6-7ubuntu2) ... 245s Setting up librdmacm1t64:armhf (50.0-2build2) ... 245s Setting up libxc9:armhf (5.2.3-1ubuntu1) ... 245s Setting up libfabric1:armhf (1.17.0-3build2) ... 246s Setting up liblapack3:armhf (3.12.0-3build1) ... 246s update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode 246s Setting up libfftw3-single3:armhf (3.3.10-1ubuntu3) ... 246s Setting up libhwloc-plugins:armhf (2.10.0-1build1) ... 246s Setting up libpmix2t64:armhf (5.0.1-4.1build1) ... 246s Setting up libopenmpi3t64:armhf (4.1.6-7ubuntu2) ... 246s Setting up openmpi-bin (4.1.6-7ubuntu2) ... 246s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 246s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 246s Setting up mpi-default-bin (1.15build1) ... 246s Setting up elk-lapw (9.2.12-1build2) ... 246s Setting up autopkgtest-satdep (0) ... 246s Processing triggers for man-db (2.12.1-2) ... 246s Processing triggers for libc-bin (2.39-3.1ubuntu2) ... 262s (Reading database ... 59375 files and directories currently installed.) 262s Removing autopkgtest-satdep (0) ... 268s autopkgtest [19:35:27]: test testsuite.sh: [----------------------- 270s 270s Running test in directory test_001... 270s 270s +---------------------------------+ 270s | Elk code version 9.2.12 started | 270s +---------------------------------+ 270s 270s Number of MPI processes : 1 270s Number of OpenMP threads per MPI process : 8 270s Total number of threads (MPI x OpenMP) : 8 270s Maximum OpenMP nesting level : 4 270s Number of OpenMP threads at first nesting level : 8 270s Number of MKL threads : 8 270s 270s RAM disk enabled 270s 270s +-----------------------+ 270s | Current task : 0 | 270s +-----------------------+ 270s Info(checkmt): changed muffin-tin radius of species 3 (Cu) from 2.4000 to 1.9694 270s Info(checkmt): changed muffin-tin radius of species 4 (O) from 1.8000 to 1.4770 270s 270s Info(findsymcrys): atomic basis shift (lattice) : 270s 0.5000000000 0.5000000000 0.5000000000 270s See GEOMETRY.OUT for new atomic positions 279s 279s Warning(gndstate): failed to reach self-consistency after 4 loops 281s 281s +-----------------------+ 281s | Current task : 1 | 281s +-----------------------+ 285s 285s Warning(linengy): could not find 1 linearisation energies in s.c. loop 2 290s 290s Warning(gndstate): failed to reach self-consistency after 4 loops 292s 292s +-----------------------+ 292s | Current task : 115 | 292s +-----------------------+ 293s 293s Info(writeefg): electric field gradient written to EFG.OUT 293s 293s +-----------------------+ 293s | Current task : 500 | 293s +-----------------------+ 293s 293s Info(testcheck): passed all tests 293s 293s +------------------+ 293s | Elk code stopped | 293s +------------------+ 293s Passed 293s 293s Running test in directory test_002... 294s 294s +---------------------------------+ 294s | Elk code version 9.2.12 started | 294s +---------------------------------+ 294s 294s Number of MPI processes : 1 294s Number of OpenMP threads per MPI process : 8 294s Total number of threads (MPI x OpenMP) : 8 294s Maximum OpenMP nesting level : 4 294s Number of OpenMP threads at first nesting level : 8 294s Number of MKL threads : 8 294s 294s RAM disk enabled 294s 294s +-----------------------+ 294s | Current task : 0 | 294s +-----------------------+ 294s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3202 294s 294s Warning(gndstate): failed to reach self-consistency after 5 loops 294s 294s +-----------------------+ 294s | Current task : 500 | 294s +-----------------------+ 294s 294s Info(testcheck): passed all tests 294s 294s +------------------+ 294s | Elk code stopped | 294s +------------------+ 294s Passed 294s 294s Running test in directory test_003... 295s 295s +---------------------------------+ 295s | Elk code version 9.2.12 started | 295s +---------------------------------+ 295s 295s Number of MPI processes : 1 295s Number of OpenMP threads per MPI process : 8 295s Total number of threads (MPI x OpenMP) : 8 295s Maximum OpenMP nesting level : 4 295s Number of OpenMP threads at first nesting level : 8 295s Number of MKL threads : 8 295s 295s RAM disk enabled 295s 295s +-----------------------+ 295s | Current task : 0 | 295s +-----------------------+ 295s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1436 295s 295s Info(findsymcrys): atomic basis shift (lattice) : 295s 0.3650000000 0.3650000000 0.3650000000 295s See GEOMETRY.OUT for new atomic positions 296s 296s Warning(gndstate): failed to reach self-consistency after 10 loops 296s 296s +-----------------------+ 296s | Current task : 500 | 296s +-----------------------+ 296s 296s Info(testcheck): passed all tests 296s 296s +------------------+ 296s | Elk code stopped | 296s +------------------+ 296s Passed 296s 296s Running test in directory test_005... 296s 296s +---------------------------------+ 296s | Elk code version 9.2.12 started | 296s +---------------------------------+ 296s 296s Number of MPI processes : 1 296s Number of OpenMP threads per MPI process : 8 296s Total number of threads (MPI x OpenMP) : 8 296s Maximum OpenMP nesting level : 4 296s Number of OpenMP threads at first nesting level : 8 296s Number of MKL threads : 8 296s 296s RAM disk enabled 296s 296s +-----------------------+ 296s | Current task : 0 | 296s +-----------------------+ 296s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3615 298s 298s Warning(gndstate): failed to reach self-consistency after 5 loops 298s 298s +-----------------------+ 298s | Current task : 500 | 298s +-----------------------+ 298s 298s Info(testcheck): passed all tests 298s 298s +------------------+ 298s | Elk code stopped | 298s +------------------+ 298s Passed 298s 298s Running test in directory test_007... 298s 298s +---------------------------------+ 298s | Elk code version 9.2.12 started | 298s +---------------------------------+ 298s 298s Number of MPI processes : 1 298s Number of OpenMP threads per MPI process : 8 298s Total number of threads (MPI x OpenMP) : 8 298s Maximum OpenMP nesting level : 4 298s Number of OpenMP threads at first nesting level : 8 298s Number of MKL threads : 8 298s 298s RAM disk enabled 298s 298s +-----------------------+ 298s | Current task : 0 | 298s +-----------------------+ 308s 308s +-----------------------+ 308s | Current task : 15 | 308s +-----------------------+ 309s 309s Info(writelsj): 309s muffin-tin L, S and J expectation values written to LSJ.OUT 309s 309s +-----------------------+ 309s | Current task : 16 | 309s +-----------------------+ 309s 309s Info(writelsj): 309s muffin-tin L, S and J expectation values for each k-point and state 309s in kstlist written to LSJ_KST.OUT 309s 309s +-----------------------+ 309s | Current task : 500 | 309s +-----------------------+ 309s 309s Info(testcheck): passed all tests 309s 309s +------------------+ 309s | Elk code stopped | 309s +------------------+ 309s Passed 309s 309s Running test in directory test_009... 309s 309s +---------------------------------+ 309s | Elk code version 9.2.12 started | 309s +---------------------------------+ 309s 309s Number of MPI processes : 1 309s Number of OpenMP threads per MPI process : 8 309s Total number of threads (MPI x OpenMP) : 8 309s Maximum OpenMP nesting level : 4 309s Number of OpenMP threads at first nesting level : 8 309s Number of MKL threads : 8 309s 309s RAM disk enabled 309s 309s +-----------------------+ 309s | Current task : 0 | 309s +-----------------------+ 309s Info(checkmt): changed muffin-tin radius of species 1 (B) from 1.8000 to 1.6129 309s Info(checkmt): changed muffin-tin radius of species 2 (N+) from 1.4500 to 1.2993 310s 310s Warning(gndstate): failed to reach self-consistency after 6 loops 310s 310s +-----------------------+ 310s | Current task : 140 | 310s +-----------------------+ 310s Info(elnes): 1 of 8 k-points 310s Info(elnes): 3 of 8 k-points 310s Info(elnes): 2 of 8 k-points 310s Info(elnes): 6 of 8 k-points 310s Info(elnes): 5 of 8 k-points 310s Info(elnes): 4 of 8 k-points 310s Info(elnes): 7 of 8 k-points 310s Info(elnes): 8 of 8 k-points 312s 312s Info(elnes): 312s ELNES double differential cross-section written to ELNES.OUT 312s 312s +-----------------------+ 312s | Current task : 500 | 312s +-----------------------+ 312s 312s Info(testcheck): passed all tests 312s 312s +------------------+ 312s | Elk code stopped | 312s +------------------+ 312s Passed 312s 312s Running test in directory test_010... 312s 312s +---------------------------------+ 312s | Elk code version 9.2.12 started | 312s +---------------------------------+ 312s 312s Number of MPI processes : 1 312s Number of OpenMP threads per MPI process : 8 312s Total number of threads (MPI x OpenMP) : 8 312s Maximum OpenMP nesting level : 4 312s Number of OpenMP threads at first nesting level : 8 312s Number of MKL threads : 8 312s 312s RAM disk enabled 312s 312s +-----------------------+ 312s | Current task : 0 | 312s +-----------------------+ 312s Info(checkmt): changed muffin-tin radius of species 1 (O) from 1.8000 to 0.9906 312s Info(checkmt): changed muffin-tin radius of species 2 (H) from 1.4000 to 0.7704 312s 312s Warning(linengy): could not find 1 linearisation energies in s.c. loop 1 313s 313s Warning(gndstate): failed to reach self-consistency after 2 loops 313s 313s Warning(linengy): could not find 1 linearisation energies in s.c. loop 2 314s 314s +-----------------------+ 314s | Current task : 500 | 314s +-----------------------+ 314s 314s Info(testcheck): passed all tests 314s 314s +------------------+ 314s | Elk code stopped | 314s +------------------+ 314s Passed 314s 314s Running test in directory test_011... 315s 315s +---------------------------------+ 315s | Elk code version 9.2.12 started | 315s +---------------------------------+ 315s 315s Number of MPI processes : 1 315s Number of OpenMP threads per MPI process : 8 315s Total number of threads (MPI x OpenMP) : 8 315s Maximum OpenMP nesting level : 4 315s Number of OpenMP threads at first nesting level : 8 315s Number of MKL threads : 8 315s 315s RAM disk enabled 315s 315s +-----------------------+ 315s | Current task : 0 | 315s +-----------------------+ 315s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 315s 315s Info(findsymcrys): atomic basis shift (lattice) : 315s 0.3750000000 0.3750000000 0.3750000000 315s See GEOMETRY.OUT for new atomic positions 315s 315s Warning(gndstate): failed to reach self-consistency after 2 loops 315s 315s +-----------------------+ 315s | Current task : 5 | 315s +-----------------------+ 315s 315s Info(genkmat): 1 of 2 k-points 315s Info(genkmat): 2 of 2 k-points 315s Info(hartfock): self-consistent loop number : 1 315s Info(eveqnhf): 1 of 2 k-points 315s Info(eveqnhf): 2 of 2 k-points 316s Info(hartfock): self-consistent loop number : 2 316s Info(eveqnhf): 1 of 2 k-points 316s Info(eveqnhf): 2 of 2 k-points 316s Info(exxengy): 1 of 2 k-points 316s Info(exxengy): 2 of 2 k-points 316s 316s +-----------------------+ 316s | Current task : 500 | 316s +-----------------------+ 316s 316s Info(testcheck): passed all tests 316s 316s +------------------+ 316s | Elk code stopped | 316s +------------------+ 316s Passed 316s 316s Running test in directory test_013... 317s 317s +---------------------------------+ 317s | Elk code version 9.2.12 started | 317s +---------------------------------+ 317s 317s Number of MPI processes : 1 317s Number of OpenMP threads per MPI process : 8 317s Total number of threads (MPI x OpenMP) : 8 317s Maximum OpenMP nesting level : 4 317s Number of OpenMP threads at first nesting level : 8 317s Number of MKL threads : 8 317s 317s RAM disk enabled 317s 317s +-----------------------+ 317s | Current task : 0 | 317s +-----------------------+ 317s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3828 317s Info(checkmt): changed muffin-tin radius of species 2 (Al) from 2.2000 to 2.1842 320s 320s Warning(gndstate): failed to reach self-consistency after 4 loops 322s 322s +-----------------------+ 322s | Current task : 500 | 322s +-----------------------+ 322s 322s Info(testcheck): passed all tests 322s 322s +------------------+ 322s | Elk code stopped | 322s +------------------+ 322s Passed 322s 322s Running test in directory test_014... 323s 323s +---------------------------------+ 323s | Elk code version 9.2.12 started | 323s +---------------------------------+ 323s 323s Number of MPI processes : 1 323s Number of OpenMP threads per MPI process : 8 323s Total number of threads (MPI x OpenMP) : 8 323s Maximum OpenMP nesting level : 4 323s Number of OpenMP threads at first nesting level : 8 323s Number of MKL threads : 8 323s 323s RAM disk enabled 323s 323s +-----------------------+ 323s | Current task : 0 | 323s +-----------------------+ 323s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 323s 323s Info(findsymcrys): atomic basis shift (lattice) : 323s 0.3750000000 0.3750000000 0.3750000000 323s See GEOMETRY.OUT for new atomic positions 323s Info(oepvcl): 1 of 8 k-points 323s Info(oepvcl): 3 of 8 k-points 323s Info(oepvcl): 7 of 8 k-points 323s Info(oepvcl): 5 of 8 k-points 323s Info(oepvcl): 6 of 8 k-points 323s Info(oepvcl): 4 of 8 k-points 323s Info(oepvcl): 8 of 8 k-points 323s Info(oepvcl): 2 of 8 k-points 326s Info(oepmain): done 10 iterations of 20 328s Info(oepmain): done 20 iterations of 20 329s 329s Warning(gndstate): failed to reach self-consistency after 2 loops 329s Info(oepvcl): 1 of 8 k-points 329s Info(oepvcl): 5 of 8 k-points 329s Info(oepvcl): 4 of 8 k-points 329s Info(oepvcl): 3 of 8 k-points 329s Info(oepvcl): 2 of 8 k-points 329s Info(oepvcl): 7 of 8 k-points 329s Info(oepvcl): 6 of 8 k-points 329s Info(oepvcl): 8 of 8 k-points 332s Info(oepmain): done 10 iterations of 20 334s Info(oepmain): done 20 iterations of 20 335s Info(exxengy): 7 of 8 k-points 335s Info(exxengy): 2 of 8 k-points 335s Info(exxengy): 6 of 8 k-points 335s Info(exxengy): 5 of 8 k-points 335s Info(exxengy): 3 of 8 k-points 335s Info(exxengy): 4 of 8 k-points 335s Info(exxengy): 1 of 8 k-points 335s Info(exxengy): 8 of 8 k-points 335s 335s +-----------------------+ 335s | Current task : 500 | 335s +-----------------------+ 335s 335s Info(testcheck): passed all tests 335s 335s +------------------+ 335s | Elk code stopped | 335s +------------------+ 335s Passed 335s 335s Running test in directory test_018... 336s 336s +---------------------------------+ 336s | Elk code version 9.2.12 started | 336s +---------------------------------+ 336s 336s Number of MPI processes : 1 336s Number of OpenMP threads per MPI process : 8 336s Total number of threads (MPI x OpenMP) : 8 336s Maximum OpenMP nesting level : 4 336s Number of OpenMP threads at first nesting level : 8 336s Number of MKL threads : 8 336s 336s RAM disk enabled 336s 336s +-----------------------+ 336s | Current task : 0 | 336s +-----------------------+ 337s 337s +-----------------------+ 337s | Current task : 205 | 337s +-----------------------+ 337s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P1.OUT 345s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P1.OUT 357s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P1.OUT 375s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P2.OUT 395s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P2.OUT 415s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P2.OUT 425s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P3.OUT 431s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P3.OUT 438s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P3.OUT 445s Info(dyntask): nothing more to do 445s 445s +-----------------------+ 445s | Current task : 210 | 445s +-----------------------+ 449s 449s Info(phdos): 449s phonon density of states written to PHDOS.OUT 449s thermodynamic properties written to THERMO.OUT 449s 449s +-----------------------+ 449s | Current task : 500 | 449s +-----------------------+ 449s 449s Info(testcheck): passed all tests 449s 449s +------------------+ 449s | Elk code stopped | 449s +------------------+ 449s Passed 449s autopkgtest [19:38:28]: test testsuite.sh: -----------------------] 453s testsuite.sh PASS 453s autopkgtest [19:38:32]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 457s autopkgtest [19:38:36]: @@@@@@@@@@@@@@@@@@@@ summary 457s testsuite.sh PASS