0s autopkgtest [13:44:31]: starting date and time: 2024-06-08 13:44:31+0000 0s autopkgtest [13:44:31]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [13:44:31]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gi0l7sb0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade symfit --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos03-arm64-43.secgroup --name adt-oracular-arm64-symfit-20240608-134431-juju-7f2275-prod-proposed-migration-environment-3-7bb91284-29b4-4a0c-891b-3b35bf5dc6a1 --image adt/ubuntu-oracular-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 746s autopkgtest [13:56:57]: testbed dpkg architecture: arm64 746s autopkgtest [13:56:57]: testbed apt version: 2.9.3 746s autopkgtest [13:56:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 748s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 748s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.2 kB] 748s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [1680 B] 748s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [338 kB] 748s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 748s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [67.9 kB] 748s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [31.8 kB] 748s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [305 kB] 748s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [9192 B] 748s Fetched 916 kB in 2s (465 kB/s) 749s Reading package lists... 751s Reading package lists... 751s Building dependency tree... 751s Reading state information... 752s Calculating upgrade... 752s The following packages will be upgraded: 752s bash 753s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 753s Need to get 781 kB of archives. 753s After this operation, 0 B of additional disk space will be used. 753s Get:1 http://ftpmaster.internal/ubuntu oracular/main arm64 bash arm64 5.2.21-2.1ubuntu1 [781 kB] 754s Fetched 781 kB in 1s (699 kB/s) 755s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78200 files and directories currently installed.) 755s Preparing to unpack .../bash_5.2.21-2.1ubuntu1_arm64.deb ... 755s Unpacking bash (5.2.21-2.1ubuntu1) over (5.2.21-2ubuntu5) ... 755s Setting up bash (5.2.21-2.1ubuntu1) ... 755s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 755s Processing triggers for debianutils (5.18) ... 755s Processing triggers for install-info (7.1-3build2) ... 755s Processing triggers for man-db (2.12.1-1) ... 756s Reading package lists... 756s Building dependency tree... 756s Reading state information... 760s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 762s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 763s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 763s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 763s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 764s Reading package lists... 764s Reading package lists... 765s Building dependency tree... 765s Reading state information... 765s Calculating upgrade... 765s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 766s Reading package lists... 766s Building dependency tree... 766s Reading state information... 766s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 769s autopkgtest [13:57:20]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 02:32:42 UTC 2024 769s autopkgtest [13:57:20]: @@@@@@@@@@@@@@@@@@@@ apt-source symfit 773s Get:1 http://ftpmaster.internal/ubuntu oracular/universe symfit 0.5.6-2ubuntu1 (dsc) [2518 B] 773s Get:2 http://ftpmaster.internal/ubuntu oracular/universe symfit 0.5.6-2ubuntu1 (tar) [923 kB] 773s Get:3 http://ftpmaster.internal/ubuntu oracular/universe symfit 0.5.6-2ubuntu1 (diff) [5824 B] 774s gpgv: Signature made Sat Apr 6 21:50:15 2024 UTC 774s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 774s gpgv: Can't check signature: No public key 774s dpkg-source: warning: cannot verify inline signature for ./symfit_0.5.6-2ubuntu1.dsc: no acceptable signature found 774s autopkgtest [13:57:25]: testing package symfit version 0.5.6-2ubuntu1 775s autopkgtest [13:57:26]: build not needed 778s autopkgtest [13:57:29]: test pytest: preparing testbed 780s Reading package lists... 780s Building dependency tree... 780s Reading state information... 780s Starting pkgProblemResolver with broken count: 0 781s Starting 2 pkgProblemResolver with broken count: 0 781s Done 781s The following additional packages will be installed: 781s blt fonts-lyx fonts-mathjax fonts-open-sans libblas3 libgfortran5 libgomp1 781s libgraphite2-3 libharfbuzz0b libimagequant0 libjs-jquery libjs-jquery-ui 781s libjs-mathjax libjs-requirejs libjs-sphinxdoc libjs-underscore liblapack3 781s liblbfgsb0 liblcms2-2 libopenjp2-7 libqhull-r8.0 libraqm0 libtcl8.6 libtk8.6 781s libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 781s python-matplotlib-data python-scipy-doc python-sympy-doc python3-all 781s python3-appdirs python3-brotli python3-contourpy python3-cycler 781s python3-dateutil python3-decorator python3-doc python3-fonttools python3-fs 781s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 781s python3-matplotlib python3-mpmath python3-numpy python3-packaging 781s python3-pil python3-pil.imagetk python3-pluggy python3-pytest python3-scipy 781s python3-symfit python3-symfit-doc python3-sympy python3-tk python3-toposort 781s python3-ufolib2 python3.12-doc tk8.6-blt2.5 unicode-data x11-common 781s Suggested packages: 781s blt-demo libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 781s libjs-mathjax-doc liblcms2-utils tcl8.6 tk8.6 python-cycler-doc 781s python3-examples python-lxml-doc cm-super-minimal dvipng ffmpeg 781s fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common 781s python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip 781s python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc 781s python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python-pil-doc 781s texlive-fonts-extra tix python3-tk-dbg 781s Recommended packages: 781s javascript-common python3-bs4 python3-cssselect python3-html5lib 781s python3-olefile g++ | c++-compiler isympy-common 781s The following NEW packages will be installed: 781s autopkgtest-satdep blt fonts-lyx fonts-mathjax fonts-open-sans libblas3 781s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 781s libjs-jquery libjs-jquery-ui libjs-mathjax libjs-requirejs libjs-sphinxdoc 781s libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 libopenjp2-7 libqhull-r8.0 781s libraqm0 libtcl8.6 libtk8.6 libwebpdemux2 libwebpmux3 libxft2 libxrender1 781s libxslt1.1 libxss1 python-matplotlib-data python-scipy-doc python-sympy-doc 781s python3-all python3-appdirs python3-brotli python3-contourpy python3-cycler 781s python3-dateutil python3-decorator python3-doc python3-fonttools python3-fs 781s python3-iniconfig python3-kiwisolver python3-lxml python3-lz4 781s python3-matplotlib python3-mpmath python3-numpy python3-packaging 781s python3-pil python3-pil.imagetk python3-pluggy python3-pytest python3-scipy 781s python3-symfit python3-symfit-doc python3-sympy python3-tk python3-toposort 781s python3-ufolib2 python3.12-doc tk8.6-blt2.5 unicode-data x11-common 781s 0 upgraded, 67 newly installed, 0 to remove and 0 not upgraded. 781s Need to get 129 MB/129 MB of archives. 781s After this operation, 556 MB of additional disk space will be used. 781s Get:1 /tmp/autopkgtest.avOhjj/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [736 B] 781s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libtcl8.6 arm64 8.6.14+dfsg-1build1 [978 kB] 782s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 782s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 782s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 782s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 782s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 libtk8.6 arm64 8.6.14-1build1 [767 kB] 782s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7build1 [618 kB] 782s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 blt arm64 2.5.3+dfsg-7build1 [4840 B] 782s Get:10 http://ftpmaster.internal/ubuntu oracular/universe arm64 fonts-lyx all 2.4.0-1 [171 kB] 782s Get:11 http://ftpmaster.internal/ubuntu oracular/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 782s Get:12 http://ftpmaster.internal/ubuntu oracular/universe arm64 fonts-open-sans all 1.11-2 [635 kB] 782s Get:13 http://ftpmaster.internal/ubuntu oracular/main arm64 libblas3 arm64 3.12.0-3build1 [143 kB] 782s Get:14 http://ftpmaster.internal/ubuntu oracular/main arm64 libgfortran5 arm64 14.1.0-1ubuntu1 [443 kB] 782s Get:15 http://ftpmaster.internal/ubuntu oracular/main arm64 libgomp1 arm64 14.1.0-1ubuntu1 [144 kB] 782s Get:16 http://ftpmaster.internal/ubuntu oracular/main arm64 libgraphite2-3 arm64 1.3.14-2build1 [70.8 kB] 782s Get:17 http://ftpmaster.internal/ubuntu oracular/main arm64 libharfbuzz0b arm64 8.3.0-2build2 [463 kB] 782s Get:18 http://ftpmaster.internal/ubuntu oracular/main arm64 libimagequant0 arm64 2.18.0-1build1 [37.1 kB] 782s Get:19 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 782s Get:20 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 782s Get:21 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 782s Get:22 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-sphinxdoc all 7.2.6-8 [150 kB] 782s Get:23 http://ftpmaster.internal/ubuntu oracular/main arm64 liblapack3 arm64 3.12.0-3build1 [2241 kB] 782s Get:24 http://ftpmaster.internal/ubuntu oracular/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 782s Get:25 http://ftpmaster.internal/ubuntu oracular/main arm64 liblcms2-2 arm64 2.14-2build1 [161 kB] 782s Get:26 http://ftpmaster.internal/ubuntu oracular/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB] 782s Get:27 http://ftpmaster.internal/ubuntu oracular/main arm64 libraqm0 arm64 0.10.1-1build1 [14.7 kB] 782s Get:28 http://ftpmaster.internal/ubuntu oracular/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [12.3 kB] 782s Get:29 http://ftpmaster.internal/ubuntu oracular/main arm64 libwebpmux3 arm64 1.4.0-0.1 [25.1 kB] 782s Get:30 http://ftpmaster.internal/ubuntu oracular/main arm64 libxslt1.1 arm64 1.1.39-0exp1build1 [166 kB] 782s Get:31 http://ftpmaster.internal/ubuntu oracular/universe arm64 python-matplotlib-data all 3.6.3-2ubuntu1 [2937 kB] 782s Get:32 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 782s Get:33 http://ftpmaster.internal/ubuntu oracular/universe arm64 python-sympy-doc all 1.12-8 [18.8 MB] 783s Get:34 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-all arm64 3.12.3-0ubuntu1 [888 B] 783s Get:35 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-appdirs all 1.4.4-4 [10.9 kB] 783s Get:36 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-brotli arm64 1.1.0-2build2 [340 kB] 783s Get:37 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-numpy arm64 1:1.26.4+ds-10 [3565 kB] 783s Get:38 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-contourpy arm64 1.0.7-3 [163 kB] 783s Get:39 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-cycler all 0.12.1-1 [9716 B] 783s Get:40 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-dateutil all 2.9.0-2 [80.3 kB] 783s Get:41 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 783s Get:42 http://ftpmaster.internal/ubuntu oracular/main arm64 python3.12-doc all 3.12.3-1 [12.1 MB] 783s Get:43 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-doc all 3.12.3-0ubuntu1 [10.1 kB] 783s Get:44 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-scipy arm64 1.11.4-10 [15.0 MB] 784s Get:45 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 784s Get:46 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 784s Get:47 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-sympy all 1.12-8 [3966 kB] 784s Get:48 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-fs all 2.4.16-4 [91.3 kB] 784s Get:49 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-lxml arm64 5.2.1-1 [1179 kB] 784s Get:50 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-lz4 arm64 4.0.2+dfsg-1build4 [26.7 kB] 784s Get:51 http://ftpmaster.internal/ubuntu oracular/universe arm64 unicode-data all 15.1.0-1 [8878 kB] 784s Get:52 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-fonttools arm64 4.46.0-1build2 [1398 kB] 784s Get:53 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-iniconfig all 1.1.1-2 [6024 B] 784s Get:54 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-kiwisolver arm64 1.4.5-1 [48.9 kB] 784s Get:55 http://ftpmaster.internal/ubuntu oracular/main arm64 libopenjp2-7 arm64 2.5.0-2build3 [171 kB] 784s Get:56 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-pil arm64 10.3.0-2 [446 kB] 784s Get:57 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-tk arm64 3.12.3-0ubuntu1 [102 kB] 784s Get:58 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pil.imagetk arm64 10.3.0-2 [9268 B] 784s Get:59 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-packaging all 24.0-1 [41.1 kB] 784s Get:60 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-matplotlib arm64 3.6.3-2ubuntu1 [5963 kB] 784s Get:61 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-pluggy all 1.5.0-1 [21.0 kB] 784s Get:62 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 python3-pytest all 8.2.2-1ubuntu1 [250 kB] 784s Get:63 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-toposort all 1.10-1 [6616 B] 784s Get:64 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-symfit all 0.5.6-2ubuntu1 [45.3 kB] 784s Get:65 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-requirejs all 2.3.6+ds+~2.1.37-1 [201 kB] 784s Get:66 http://ftpmaster.internal/ubuntu oracular/universe arm64 python-scipy-doc all 1.11.4-10 [35.6 MB] 785s Get:67 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-symfit-doc all 0.5.6-2ubuntu1 [1118 kB] 786s Preconfiguring packages ... 786s Fetched 129 MB in 4s (34.0 MB/s) 786s Selecting previously unselected package libtcl8.6:arm64. 786s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78200 files and directories currently installed.) 786s Preparing to unpack .../00-libtcl8.6_8.6.14+dfsg-1build1_arm64.deb ... 786s Unpacking libtcl8.6:arm64 (8.6.14+dfsg-1build1) ... 786s Selecting previously unselected package libxrender1:arm64. 786s Preparing to unpack .../01-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 786s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 786s Selecting previously unselected package libxft2:arm64. 786s Preparing to unpack .../02-libxft2_2.3.6-1build1_arm64.deb ... 786s Unpacking libxft2:arm64 (2.3.6-1build1) ... 786s Selecting previously unselected package x11-common. 786s Preparing to unpack .../03-x11-common_1%3a7.7+23ubuntu3_all.deb ... 786s Unpacking x11-common (1:7.7+23ubuntu3) ... 786s Selecting previously unselected package libxss1:arm64. 786s Preparing to unpack .../04-libxss1_1%3a1.2.3-1build3_arm64.deb ... 786s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 786s Selecting previously unselected package libtk8.6:arm64. 786s Preparing to unpack .../05-libtk8.6_8.6.14-1build1_arm64.deb ... 786s Unpacking libtk8.6:arm64 (8.6.14-1build1) ... 786s Selecting previously unselected package tk8.6-blt2.5. 786s Preparing to unpack .../06-tk8.6-blt2.5_2.5.3+dfsg-7build1_arm64.deb ... 786s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 786s Selecting previously unselected package blt. 786s Preparing to unpack .../07-blt_2.5.3+dfsg-7build1_arm64.deb ... 786s Unpacking blt (2.5.3+dfsg-7build1) ... 786s Selecting previously unselected package fonts-lyx. 786s Preparing to unpack .../08-fonts-lyx_2.4.0-1_all.deb ... 786s Unpacking fonts-lyx (2.4.0-1) ... 786s Selecting previously unselected package fonts-mathjax. 786s Preparing to unpack .../09-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 786s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 786s Selecting previously unselected package fonts-open-sans. 786s Preparing to unpack .../10-fonts-open-sans_1.11-2_all.deb ... 786s Unpacking fonts-open-sans (1.11-2) ... 787s Selecting previously unselected package libblas3:arm64. 787s Preparing to unpack .../11-libblas3_3.12.0-3build1_arm64.deb ... 787s Unpacking libblas3:arm64 (3.12.0-3build1) ... 787s Selecting previously unselected package libgfortran5:arm64. 787s Preparing to unpack .../12-libgfortran5_14.1.0-1ubuntu1_arm64.deb ... 787s Unpacking libgfortran5:arm64 (14.1.0-1ubuntu1) ... 787s Selecting previously unselected package libgomp1:arm64. 787s Preparing to unpack .../13-libgomp1_14.1.0-1ubuntu1_arm64.deb ... 787s Unpacking libgomp1:arm64 (14.1.0-1ubuntu1) ... 787s Selecting previously unselected package libgraphite2-3:arm64. 787s Preparing to unpack .../14-libgraphite2-3_1.3.14-2build1_arm64.deb ... 787s Unpacking libgraphite2-3:arm64 (1.3.14-2build1) ... 787s Selecting previously unselected package libharfbuzz0b:arm64. 787s Preparing to unpack .../15-libharfbuzz0b_8.3.0-2build2_arm64.deb ... 787s Unpacking libharfbuzz0b:arm64 (8.3.0-2build2) ... 787s Selecting previously unselected package libimagequant0:arm64. 787s Preparing to unpack .../16-libimagequant0_2.18.0-1build1_arm64.deb ... 787s Unpacking libimagequant0:arm64 (2.18.0-1build1) ... 787s Selecting previously unselected package libjs-jquery. 787s Preparing to unpack .../17-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 787s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 787s Selecting previously unselected package libjs-jquery-ui. 787s Preparing to unpack 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libwebpmux3:arm64 (1.4.0-0.1) ... 797s Setting up python3-appdirs (1.4.4-4) ... 797s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 797s Setting up python3-sympy (1.12-8) ... 803s Setting up liblapack3:arm64 (3.12.0-3build1) ... 803s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 803s Setting up libxft2:arm64 (2.3.6-1build1) ... 803s Setting up python3-pytest (8.2.2-1ubuntu1) ... 804s Setting up libtk8.6:arm64 (8.6.14-1build1) ... 804s Setting up python3-fs (2.4.16-4) ... 804s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 804s Setting up libraqm0:arm64 (0.10.1-1build1) ... 804s Setting up python3-numpy (1:1.26.4+ds-10) ... 806s Setting up libjs-sphinxdoc (7.2.6-8) ... 806s Setting up python3-lxml:arm64 (5.2.1-1) ... 806s Setting up python3-contourpy (1.0.7-3) ... 806s Setting up python3.12-doc (3.12.3-1) ... 806s Setting up python3-doc (3.12.3-0ubuntu1) ... 806s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 806s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 806s Setting up python3-scipy (1.11.4-10) ... 810s Setting up blt (2.5.3+dfsg-7build1) ... 810s Setting up python-sympy-doc (1.12-8) ... 810s Setting up python3-tk:arm64 (3.12.3-0ubuntu1) ... 810s Setting up python3-pil:arm64 (10.3.0-2) ... 811s Setting up python3-pil.imagetk:arm64 (10.3.0-2) ... 811s Setting up python-scipy-doc (1.11.4-10) ... 811s Setting up python3-symfit (0.5.6-2ubuntu1) ... 811s Setting up python3-symfit-doc (0.5.6-2ubuntu1) ... 811s Setting up python3-fonttools (4.46.0-1build2) ... 812s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 812s Setting up python3-matplotlib (3.6.3-2ubuntu1) ... 813s Setting up autopkgtest-satdep (0) ... 813s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 813s Processing triggers for man-db (2.12.1-1) ... 814s Processing triggers for install-info (7.1-3build2) ... 819s (Reading database ... 101609 files and directories currently installed.) 819s Removing autopkgtest-satdep (0) ... 819s autopkgtest [13:58:10]: test pytest: [----------------------- 824s ============================= test session starts ============================== 824s platform linux -- Python 3.12.3, pytest-8.2.2, pluggy-1.5.0 824s rootdir: /tmp/autopkgtest.avOhjj/build.SDS/src 824s configfile: pytest.ini 824s collected 141 items 824s 824s symfit/contrib/interactive_guess/tests/test_interactive_fit.py ......... [ 6%] 826s ......... [ 12%] 826s tests/test_argument.py .... [ 15%] 827s tests/test_auto_fit.py ...... [ 19%] 832s tests/test_constrained.py .....s............ [ 32%] 832s tests/test_distributions.py .. [ 34%] 835s tests/test_finite_difference.py ........ [ 39%] 847s tests/test_fit_result.py .......... [ 46%] 866s tests/test_general.py .........s..............s...... [ 68%] 902s tests/test_global_opt.py .... [ 71%] 905s tests/test_minimize.py ...... [ 75%] 925s tests/test_minimizers.py ....... [ 80%] 925s tests/test_model.py ............ [ 89%] 926s tests/test_objectives.py ..... [ 92%] 936s tests/test_ode.py ........ [ 98%] 937s tests/test_support.py .. [100%] 937s 937s =============================== warnings summary =============================== 937s symfit/core/printing.py:13 937s /tmp/autopkgtest.avOhjj/build.SDS/src/symfit/core/printing.py:13: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 937s import pkg_resources 937s 937s ../../../../usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871 937s /usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('mpl_toolkits')`. 937s Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages 937s declare_namespace(pkg) 937s 937s tests/test_auto_fit.py: 3 warnings 937s tests/test_constrained.py: 14 warnings 937s tests/test_finite_difference.py: 1 warning 937s tests/test_fit_result.py: 5 warnings 937s tests/test_general.py: 16 warnings 937s tests/test_minimizers.py: 2 warnings 937s tests/test_objectives.py: 1 warning 937s tests/test_ode.py: 1 warning 937s /tmp/autopkgtest.avOhjj/build.SDS/src/symfit/core/fit.py:278: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 937s cov_matrix = self._covariance_matrix(best_fit_params, 937s 937s tests/test_auto_fit.py: 2 warnings 937s tests/test_constrained.py: 13 warnings 937s tests/test_finite_difference.py: 2 warnings 937s tests/test_fit_result.py: 1 warning 937s tests/test_general.py: 12 warnings 937s tests/test_global_opt.py: 3 warnings 937s tests/test_ode.py: 7 warnings 937s /tmp/autopkgtest.avOhjj/build.SDS/src/symfit/core/fit.py:301: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 937s cov_matrix = self._covariance_matrix(best_fit_params, 937s 937s tests/test_general.py::test_likelihood_fitting_exponential 937s /usr/lib/python3/dist-packages/_pytest/python.py:162: DeprecationWarning: `product` is deprecated as of NumPy 1.25.0, and will be removed in NumPy 2.0. Please use `prod` instead. 937s result = testfunction(**testargs) 937s 937s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 937s =========== 138 passed, 3 skipped, 86 warnings in 115.60s (0:01:55) ============ 938s autopkgtest [14:00:09]: test pytest: -----------------------] 939s pytest PASS 939s autopkgtest [14:00:10]: test pytest: - - - - - - - - - - results - - - - - - - - - - 939s autopkgtest [14:00:10]: test autodep8-python3: preparing testbed 1023s autopkgtest [14:01:34]: testbed dpkg architecture: arm64 1023s autopkgtest [14:01:34]: testbed apt version: 2.9.3 1023s autopkgtest [14:01:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1024s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 1024s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.2 kB] 1024s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 1024s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [1680 B] 1024s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [338 kB] 1024s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [67.9 kB] 1024s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [31.8 kB] 1024s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [305 kB] 1024s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [9192 B] 1025s Fetched 916 kB in 1s (975 kB/s) 1025s Reading package lists... 1027s Reading package lists... 1027s Building dependency tree... 1027s Reading state information... 1028s Calculating upgrade... 1028s The following packages will be upgraded: 1028s bash 1028s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1028s Need to get 781 kB of archives. 1028s After this operation, 0 B of additional disk space will be used. 1028s Get:1 http://ftpmaster.internal/ubuntu oracular/main arm64 bash arm64 5.2.21-2.1ubuntu1 [781 kB] 1029s Fetched 781 kB in 0s (1633 kB/s) 1029s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78200 files and directories currently installed.) 1029s Preparing to unpack .../bash_5.2.21-2.1ubuntu1_arm64.deb ... 1029s Unpacking bash (5.2.21-2.1ubuntu1) over (5.2.21-2ubuntu5) ... 1029s Setting up bash (5.2.21-2.1ubuntu1) ... 1029s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 1029s Processing triggers for debianutils (5.18) ... 1029s Processing triggers for install-info (7.1-3build2) ... 1029s Processing triggers for man-db (2.12.1-1) ... 1030s Reading package lists... 1030s Building dependency tree... 1030s Reading state information... 1031s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1031s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 1031s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 1031s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 1031s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 1032s Reading package lists... 1032s Reading package lists... 1032s Building dependency tree... 1032s Reading state information... 1033s Calculating upgrade... 1033s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1033s Reading package lists... 1034s Building dependency tree... 1034s Reading state information... 1034s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1038s Reading package lists... 1038s Building dependency tree... 1038s Reading state information... 1038s Starting pkgProblemResolver with broken count: 0 1038s Starting 2 pkgProblemResolver with broken count: 0 1038s Done 1039s The following additional packages will be installed: 1039s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 1039s python3-mpmath python3-numpy python3-scipy python3-symfit python3-sympy 1039s python3-toposort 1039s Suggested packages: 1039s python-mpmath-doc python3-gmpy2 python3-matplotlib gcc gfortran 1039s python-numpy-doc python3-dev python3-pytest python-scipy-doc 1039s texlive-fonts-extra dvipng python-sympy-doc 1039s Recommended packages: 1039s g++ | c++-compiler python3-pil isympy-common 1039s The following NEW packages will be installed: 1039s autopkgtest-satdep libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all 1039s python3-decorator python3-mpmath python3-numpy python3-scipy python3-symfit 1039s python3-sympy python3-toposort 1039s 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. 1039s Need to get 25.8 MB/25.8 MB of archives. 1039s After this operation, 117 MB of additional disk space will be used. 1039s Get:1 /tmp/autopkgtest.avOhjj/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [716 B] 1039s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libblas3 arm64 3.12.0-3build1 [143 kB] 1039s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 libgfortran5 arm64 14.1.0-1ubuntu1 [443 kB] 1039s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 liblapack3 arm64 3.12.0-3build1 [2241 kB] 1039s Get:5 http://ftpmaster.internal/ubuntu oracular/universe arm64 liblbfgsb0 arm64 3.0+dfsg.4-1build1 [27.7 kB] 1039s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-all arm64 3.12.3-0ubuntu1 [888 B] 1039s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-decorator all 5.1.1-5 [10.1 kB] 1039s Get:8 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-mpmath all 1.3.0-1 [425 kB] 1039s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-numpy arm64 1:1.26.4+ds-10 [3565 kB] 1040s Get:10 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-scipy arm64 1.11.4-10 [15.0 MB] 1040s Get:11 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-sympy all 1.12-8 [3966 kB] 1040s Get:12 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-toposort all 1.10-1 [6616 B] 1040s Get:13 http://ftpmaster.internal/ubuntu oracular/universe arm64 python3-symfit all 0.5.6-2ubuntu1 [45.3 kB] 1041s Fetched 25.8 MB in 1s (18.6 MB/s) 1041s Selecting previously unselected package libblas3:arm64. 1041s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78200 files and directories currently installed.) 1041s Preparing to unpack .../00-libblas3_3.12.0-3build1_arm64.deb ... 1041s Unpacking libblas3:arm64 (3.12.0-3build1) ... 1041s Selecting previously unselected package libgfortran5:arm64. 1041s Preparing to unpack .../01-libgfortran5_14.1.0-1ubuntu1_arm64.deb ... 1041s Unpacking libgfortran5:arm64 (14.1.0-1ubuntu1) ... 1041s Selecting previously unselected package liblapack3:arm64. 1041s Preparing to unpack .../02-liblapack3_3.12.0-3build1_arm64.deb ... 1041s Unpacking liblapack3:arm64 (3.12.0-3build1) ... 1041s Selecting previously unselected package liblbfgsb0:arm64. 1041s Preparing to unpack .../03-liblbfgsb0_3.0+dfsg.4-1build1_arm64.deb ... 1041s Unpacking liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 1041s Selecting previously unselected package python3-all. 1041s Preparing to unpack .../04-python3-all_3.12.3-0ubuntu1_arm64.deb ... 1041s Unpacking python3-all (3.12.3-0ubuntu1) ... 1041s Selecting previously unselected package python3-decorator. 1041s Preparing to unpack .../05-python3-decorator_5.1.1-5_all.deb ... 1041s Unpacking python3-decorator (5.1.1-5) ... 1041s Selecting previously unselected package python3-mpmath. 1041s Preparing to unpack .../06-python3-mpmath_1.3.0-1_all.deb ... 1041s Unpacking python3-mpmath (1.3.0-1) ... 1042s Selecting previously unselected package python3-numpy. 1042s Preparing to unpack .../07-python3-numpy_1%3a1.26.4+ds-10_arm64.deb ... 1042s Unpacking python3-numpy (1:1.26.4+ds-10) ... 1043s Selecting previously unselected package python3-scipy. 1043s Preparing to unpack .../08-python3-scipy_1.11.4-10_arm64.deb ... 1043s Unpacking python3-scipy (1.11.4-10) ... 1043s Selecting previously unselected package python3-sympy. 1043s Preparing to unpack .../09-python3-sympy_1.12-8_all.deb ... 1043s Unpacking python3-sympy (1.12-8) ... 1043s Selecting previously unselected package python3-toposort. 1043s Preparing to unpack .../10-python3-toposort_1.10-1_all.deb ... 1043s Unpacking python3-toposort (1.10-1) ... 1043s Selecting previously unselected package python3-symfit. 1043s Preparing to unpack .../11-python3-symfit_0.5.6-2ubuntu1_all.deb ... 1043s Unpacking python3-symfit (0.5.6-2ubuntu1) ... 1043s Selecting previously unselected package autopkgtest-satdep. 1043s Preparing to unpack .../12-2-autopkgtest-satdep.deb ... 1043s Unpacking autopkgtest-satdep (0) ... 1043s Setting up python3-toposort (1.10-1) ... 1044s Setting up python3-all (3.12.3-0ubuntu1) ... 1044s Setting up python3-decorator (5.1.1-5) ... 1044s Setting up libblas3:arm64 (3.12.0-3build1) ... 1044s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1044s Setting up libgfortran5:arm64 (14.1.0-1ubuntu1) ... 1044s Setting up python3-mpmath (1.3.0-1) ... 1044s Setting up python3-sympy (1.12-8) ... 1050s Setting up liblapack3:arm64 (3.12.0-3build1) ... 1050s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1050s Setting up python3-numpy (1:1.26.4+ds-10) ... 1052s Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1build1) ... 1052s Setting up python3-scipy (1.11.4-10) ... 1055s Setting up python3-symfit (0.5.6-2ubuntu1) ... 1055s Setting up autopkgtest-satdep (0) ... 1055s Processing triggers for man-db (2.12.1-1) ... 1055s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 1059s (Reading database ... 82263 files and directories currently installed.) 1059s Removing autopkgtest-satdep (0) ... 1063s autopkgtest [14:02:14]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import symfit; print(symfit)" ; done 1063s autopkgtest [14:02:14]: test autodep8-python3: [----------------------- 1063s Testing with python3.12: 1064s 1064s autopkgtest [14:02:15]: test autodep8-python3: -----------------------] 1065s autodep8-python3 PASS (superficial) 1065s autopkgtest [14:02:16]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 1065s autopkgtest [14:02:16]: @@@@@@@@@@@@@@@@@@@@ summary 1065s pytest PASS 1065s autodep8-python3 PASS (superficial) 1076s nova [W] Skipping flock in bos03-arm64 1076s Creating nova instance adt-oracular-arm64-symfit-20240608-134431-juju-7f2275-prod-proposed-migration-environment-3-7bb91284-29b4-4a0c-891b-3b35bf5dc6a1 from image adt/ubuntu-oracular-arm64-server-20240608.img (UUID 22fa5d69-8269-442f-bb5d-fd1454f7b08f)... 1076s nova [W] Skipping flock in bos03-arm64 1076s Creating nova instance adt-oracular-arm64-symfit-20240608-134431-juju-7f2275-prod-proposed-migration-environment-3-7bb91284-29b4-4a0c-891b-3b35bf5dc6a1 from image adt/ubuntu-oracular-arm64-server-20240608.img (UUID 22fa5d69-8269-442f-bb5d-fd1454f7b08f)...