0s autopkgtest [10:58:08]: starting date and time: 2024-06-16 10:58:08+0000 0s autopkgtest [10:58:08]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [10:58:08]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i72_19vi/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-gbm --apt-upgrade r-cran-gbm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-gbm/2.1.9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-49.secgroup --name adt-oracular-arm64-r-cran-gbm-20240616-102301-juju-7f2275-prod-proposed-migration-environment-2-c315ea8a-655b-4f4d-b6a6-ea10552f1659 --image adt/ubuntu-oracular-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 988s autopkgtest [11:14:36]: testbed dpkg architecture: arm64 988s autopkgtest [11:14:36]: testbed apt version: 2.9.3 988s autopkgtest [11:14:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup 991s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 994s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7052 B] 994s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 994s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [388 kB] 994s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [36.1 kB] 994s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main arm64 Packages [55.3 kB] 994s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/restricted arm64 Packages [33.3 kB] 994s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 Packages [311 kB] 994s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse arm64 Packages [8312 B] 995s Fetched 952 kB in 4s (221 kB/s) 996s Reading package lists... 1005s Reading package lists... 1006s Building dependency tree... 1006s Reading state information... 1006s Calculating upgrade... 1013s The following packages will be upgraded: 1013s apt apt-utils dracut-install libapt-pkg6.0t64 libc-bin libc-dev-bin 1013s libc-devtools libc6 libc6-dev libldap-common libldap2 libnss3 locales 1013s python3-certifi ubuntu-pro-client ubuntu-pro-client-l10n 1014s 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1014s Need to get 13.8 MB of archives. 1014s After this operation, 9216 B of additional disk space will be used. 1014s Get:1 http://ftpmaster.internal/ubuntu oracular/main arm64 libc-devtools arm64 2.39-0ubuntu9 [27.8 kB] 1015s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libc6-dev arm64 2.39-0ubuntu9 [1595 kB] 1015s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 libc-dev-bin arm64 2.39-0ubuntu9 [19.7 kB] 1015s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 libc6 arm64 2.39-0ubuntu9 [2776 kB] 1015s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 libc-bin arm64 2.39-0ubuntu9 [591 kB] 1015s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 libapt-pkg6.0t64 arm64 2.9.5 [967 kB] 1015s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 apt arm64 2.9.5 [1362 kB] 1015s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 apt-utils arm64 2.9.5 [211 kB] 1015s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 locales all 2.39-0ubuntu9 [4235 kB] 1015s Get:10 http://ftpmaster.internal/ubuntu oracular/main arm64 ubuntu-pro-client-l10n arm64 32.3.1 [19.4 kB] 1015s Get:11 http://ftpmaster.internal/ubuntu oracular/main arm64 ubuntu-pro-client arm64 32.3.1 [228 kB] 1016s Get:12 http://ftpmaster.internal/ubuntu oracular/main arm64 dracut-install arm64 102-3ubuntu2 [32.4 kB] 1016s Get:13 http://ftpmaster.internal/ubuntu oracular/main arm64 libldap-common all 2.6.7+dfsg-1~exp1ubuntu9 [31.5 kB] 1016s Get:14 http://ftpmaster.internal/ubuntu oracular/main arm64 libldap2 arm64 2.6.7+dfsg-1~exp1ubuntu9 [193 kB] 1016s Get:15 http://ftpmaster.internal/ubuntu oracular/main arm64 libnss3 arm64 2:3.101-1 [1361 kB] 1016s Get:16 http://ftpmaster.internal/ubuntu oracular/main arm64 python3-certifi all 2024.6.2-1 [160 kB] 1030s Preconfiguring packages ... 1031s Fetched 13.8 MB in 6s (2373 kB/s) 1031s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1031s Preparing to unpack .../libc-devtools_2.39-0ubuntu9_arm64.deb ... 1031s Unpacking libc-devtools (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1032s Preparing to unpack .../libc6-dev_2.39-0ubuntu9_arm64.deb ... 1032s Unpacking libc6-dev:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1033s Preparing to unpack .../libc-dev-bin_2.39-0ubuntu9_arm64.deb ... 1033s Unpacking libc-dev-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1034s Preparing to unpack .../libc6_2.39-0ubuntu9_arm64.deb ... 1036s Unpacking libc6:arm64 (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1038s Setting up libc6:arm64 (2.39-0ubuntu9) ... 1040s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1040s Preparing to unpack .../libc-bin_2.39-0ubuntu9_arm64.deb ... 1040s Unpacking libc-bin (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1041s Setting up libc-bin (2.39-0ubuntu9) ... 1041s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1041s Preparing to unpack .../libapt-pkg6.0t64_2.9.5_arm64.deb ... 1041s Unpacking libapt-pkg6.0t64:arm64 (2.9.5) over (2.9.3) ... 1042s Setting up libapt-pkg6.0t64:arm64 (2.9.5) ... 1042s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1042s Preparing to unpack .../archives/apt_2.9.5_arm64.deb ... 1042s Unpacking apt (2.9.5) over (2.9.3) ... 1043s Setting up apt (2.9.5) ... 1045s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1045s Preparing to unpack .../0-apt-utils_2.9.5_arm64.deb ... 1045s Unpacking apt-utils (2.9.5) over (2.9.3) ... 1045s Preparing to unpack .../1-locales_2.39-0ubuntu9_all.deb ... 1045s Unpacking locales (2.39-0ubuntu9) over (2.39-0ubuntu8.1) ... 1047s Preparing to unpack .../2-ubuntu-pro-client-l10n_32.3.1_arm64.deb ... 1047s Unpacking ubuntu-pro-client-l10n (32.3.1) over (32.3) ... 1047s Preparing to unpack .../3-ubuntu-pro-client_32.3.1_arm64.deb ... 1048s Unpacking ubuntu-pro-client (32.3.1) over (32.3) ... 1049s Preparing to unpack .../4-dracut-install_102-3ubuntu2_arm64.deb ... 1049s Unpacking dracut-install (102-3ubuntu2) over (102-3ubuntu1) ... 1049s Preparing to unpack .../5-libldap-common_2.6.7+dfsg-1~exp1ubuntu9_all.deb ... 1049s Unpacking libldap-common (2.6.7+dfsg-1~exp1ubuntu9) over (2.6.7+dfsg-1~exp1ubuntu8) ... 1050s Preparing to unpack .../6-libldap2_2.6.7+dfsg-1~exp1ubuntu9_arm64.deb ... 1050s Unpacking libldap2:arm64 (2.6.7+dfsg-1~exp1ubuntu9) over (2.6.7+dfsg-1~exp1ubuntu8) ... 1050s Preparing to unpack .../7-libnss3_2%3a3.101-1_arm64.deb ... 1051s Unpacking libnss3:arm64 (2:3.101-1) over (2:3.100-1) ... 1051s Preparing to unpack .../8-python3-certifi_2024.6.2-1_all.deb ... 1051s Unpacking python3-certifi (2024.6.2-1) over (2023.11.17-1) ... 1051s Setting up apt-utils (2.9.5) ... 1051s Setting up libnss3:arm64 (2:3.101-1) ... 1051s Setting up locales (2.39-0ubuntu9) ... 1054s Generating locales (this might take a while)... 1060s en_US.UTF-8... done 1060s Generation complete. 1061s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu9) ... 1061s Setting up python3-certifi (2024.6.2-1) ... 1061s Setting up dracut-install (102-3ubuntu2) ... 1061s Setting up libc-dev-bin (2.39-0ubuntu9) ... 1061s Setting up ubuntu-pro-client (32.3.1) ... 1061s Installing new version of config file /etc/apparmor.d/ubuntu_pro_esm_cache ... 1069s Setting up libldap2:arm64 (2.6.7+dfsg-1~exp1ubuntu9) ... 1069s Setting up libc-devtools (2.39-0ubuntu9) ... 1069s Setting up ubuntu-pro-client-l10n (32.3.1) ... 1069s Setting up libc6-dev:arm64 (2.39-0ubuntu9) ... 1069s Processing triggers for man-db (2.12.1-2) ... 1072s Processing triggers for libc-bin (2.39-0ubuntu9) ... 1078s Reading package lists... 1079s Building dependency tree... 1079s Reading state information... 1080s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1088s Hit:1 http://ftpmaster.internal/ubuntu oracular InRelease 1088s Hit:2 http://ftpmaster.internal/ubuntu oracular-updates InRelease 1088s Hit:3 http://ftpmaster.internal/ubuntu oracular-security InRelease 1088s Hit:4 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 1092s Reading package lists... 1092s Reading package lists... 1092s Building dependency tree... 1092s Reading state information... 1092s Calculating upgrade... 1093s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1093s Reading package lists... 1093s Building dependency tree... 1093s Reading state information... 1094s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1095s autopkgtest [11:16:23]: rebooting testbed after setup commands that affected boot 1103s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1136s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1169s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1202s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1235s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1268s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1289s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1293s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1302s autopkgtest [11:19:50]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 02:32:42 UTC 2024 1306s autopkgtest [11:19:54]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gbm 1313s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (dsc) [2188 B] 1313s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (tar) [455 kB] 1313s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe r-cran-gbm 2.1.9-1 (diff) [3272 B] 1315s gpgv: Signature made Fri Jan 26 21:55:14 2024 UTC 1315s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 1315s gpgv: issuer "tille@debian.org" 1315s gpgv: Can't check signature: No public key 1316s dpkg-source: warning: cannot verify inline signature for ./r-cran-gbm_2.1.9-1.dsc: no acceptable signature found 1322s autopkgtest [11:20:10]: testing package r-cran-gbm version 2.1.9-1 1323s autopkgtest [11:20:11]: build not needed 1324s autopkgtest [11:20:12]: test run-unit-test: preparing testbed 1328s Reading package lists... 1330s Building dependency tree... 1330s Reading state information... 1330s Starting pkgProblemResolver with broken count: 0 1330s Starting 2 pkgProblemResolver with broken count: 0 1330s Done 1331s The following additional packages will be installed: 1331s fontconfig fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2 1331s libdatrie1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 1331s libjs-bootstrap libjs-highlight.js libjs-jquery libjs-jquery-datatables 1331s libjs-mathjax liblapack3 libpango-1.0-0 libpangocairo-1.0-0 1331s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libsm6 libtcl8.6 1331s libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0 libxft2 1331s libxrender1 libxss1 libxt6t64 node-html5shiv node-normalize.css r-base-core 1331s r-cran-askpass r-cran-cli r-cran-colorspace r-cran-covr r-cran-crayon 1331s r-cran-curl r-cran-digest r-cran-evaluate r-cran-fansi r-cran-farver 1331s r-cran-gbm r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable 1331s r-cran-highr r-cran-httr r-cran-isoband r-cran-jsonlite r-cran-knitr 1331s r-cran-labeling r-cran-lattice r-cran-lazyeval r-cran-lifecycle 1331s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-mime 1331s r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig 1331s r-cran-r6 r-cran-rcolorbrewer r-cran-rex r-cran-rlang r-cran-runit 1331s r-cran-scales r-cran-survival r-cran-sys r-cran-tibble r-cran-tinytest 1331s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-withr 1331s r-cran-xfun r-cran-yaml unzip x11-common xdg-utils zip 1331s Suggested packages: 1331s fonts-mathjax-extras fonts-stix libjs-mathjax-doc tcl8.6 tk8.6 nodejs 1331s elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-kernsmooth 1331s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs 1331s r-cran-dplyr r-cran-png r-cran-jpeg r-cran-rmarkdown r-cran-rstudioapi 1331s r-cran-magick r-cran-sf r-cran-bit64 r-cran-dbi r-cran-formattable 1331s r-cran-nanotime r-cran-palmerpenguins r-cran-stringi r-cran-units 1331s r-cran-vdiffr r-cran-testthat r-cran-hmisc r-cran-roxygen2 r-cran-rvest 1331s r-cran-stringr r-cran-spelling r-cran-bench r-cran-blob r-cran-brio 1331s r-cran-callr r-cran-here r-cran-hms r-cran-htmltools r-cran-pkgbuild 1331s r-cran-pkgload r-cran-purrr r-cran-tidyr 1331s Recommended packages: 1331s javascript-common r-recommended r-base-dev r-doc-html r-cran-testthat 1331s r-cran-callr r-cran-htmltools r-cran-htmlwidgets r-cran-mockery 1331s r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot 1331s r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 r-cran-memoise 1331s r-cran-spelling r-cran-later r-cran-httpuv r-cran-webutils r-cran-unitizer 1331s r-cran-dplyr r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps 1331s r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-rpart 1331s r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-dbi r-cran-rsqlite 1331s r-cran-waldo r-cran-markdown r-cran-testit r-cran-jpeg r-cran-png 1331s r-cran-readr r-cran-r.rsp r-cran-bslib r-cran-codetools r-cran-formatr 1331s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-sass 1331s r-cran-tikzdevice r-cran-tinytex r-cran-webshot node-highlight.js 1331s r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-fs 1331s r-cran-usethis r-cran-bit64 r-cran-dichromat r-cran-hms r-cran-stringi 1331s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-generics 1331s r-cran-pkgdown r-cran-zeallot r-cran-remotes r-cran-renv 1331s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 1331s x11-xserver-utils 1331s The following NEW packages will be installed: 1331s autopkgtest-satdep fontconfig fonts-glyphicons-halflings fonts-mathjax 1331s libblas3 libcairo2 libdatrie1 libgfortran5 libgomp1 libgraphite2-3 1331s libharfbuzz0b libice6 libjs-bootstrap libjs-highlight.js libjs-jquery 1331s libjs-jquery-datatables libjs-mathjax liblapack3 libpango-1.0-0 1331s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 1331s libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0 1331s libxft2 libxrender1 libxss1 libxt6t64 node-html5shiv node-normalize.css 1331s r-base-core r-cran-askpass r-cran-cli r-cran-colorspace r-cran-covr 1331s r-cran-crayon r-cran-curl r-cran-digest r-cran-evaluate r-cran-fansi 1331s r-cran-farver r-cran-gbm r-cran-ggplot2 r-cran-glue r-cran-gridextra 1331s r-cran-gtable r-cran-highr r-cran-httr r-cran-isoband r-cran-jsonlite 1331s r-cran-knitr r-cran-labeling r-cran-lattice r-cran-lazyeval r-cran-lifecycle 1331s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-mime 1331s r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pillar r-cran-pkgconfig 1331s r-cran-r6 r-cran-rcolorbrewer r-cran-rex r-cran-rlang r-cran-runit 1331s r-cran-scales r-cran-survival r-cran-sys r-cran-tibble r-cran-tinytest 1331s r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-withr 1331s r-cran-xfun r-cran-yaml unzip x11-common xdg-utils zip 1331s 0 upgraded, 93 newly installed, 0 to remove and 0 not upgraded. 1331s Need to get 89.6 MB/89.6 MB of archives. 1331s After this operation, 194 MB of additional disk space will be used. 1331s Get:1 /tmp/autopkgtest.suppRa/1-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [744 B] 1331s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 fontconfig arm64 2.15.0-1.1ubuntu2 [190 kB] 1332s Get:3 http://ftpmaster.internal/ubuntu oracular/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 1332s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 1332s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 libblas3 arm64 3.12.0-3build1 [143 kB] 1332s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 libpixman-1-0 arm64 0.42.2-1build1 [204 kB] 1332s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 1332s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 1332s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB] 1332s Get:10 http://ftpmaster.internal/ubuntu oracular/main arm64 libcairo2 arm64 1.18.0-3build1 [555 kB] 1332s Get:11 http://ftpmaster.internal/ubuntu oracular/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 1332s Get:12 http://ftpmaster.internal/ubuntu oracular/main arm64 libgfortran5 arm64 14.1.0-1ubuntu1 [443 kB] 1332s Get:13 http://ftpmaster.internal/ubuntu oracular/main arm64 libgomp1 arm64 14.1.0-1ubuntu1 [144 kB] 1332s Get:14 http://ftpmaster.internal/ubuntu oracular/main arm64 libgraphite2-3 arm64 1.3.14-2build1 [70.8 kB] 1332s Get:15 http://ftpmaster.internal/ubuntu oracular/main arm64 libharfbuzz0b arm64 8.3.0-2build2 [463 kB] 1332s Get:16 http://ftpmaster.internal/ubuntu oracular/main arm64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 1332s Get:17 http://ftpmaster.internal/ubuntu oracular/main arm64 libice6 arm64 2:1.0.10-1build3 [41.1 kB] 1332s Get:18 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 1332s Get:19 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 1332s Get:20 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 1332s Get:21 http://ftpmaster.internal/ubuntu oracular/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 1332s Get:22 http://ftpmaster.internal/ubuntu oracular/main arm64 liblapack3 arm64 3.12.0-3build1 [2241 kB] 1332s Get:23 http://ftpmaster.internal/ubuntu oracular/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 1332s Get:24 http://ftpmaster.internal/ubuntu oracular/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 1332s Get:25 http://ftpmaster.internal/ubuntu oracular/main arm64 libpango-1.0-0 arm64 1.54.0+ds-1 [230 kB] 1332s Get:26 http://ftpmaster.internal/ubuntu oracular/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-1 [41.7 kB] 1332s Get:27 http://ftpmaster.internal/ubuntu oracular/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-1 [27.2 kB] 1332s Get:28 http://ftpmaster.internal/ubuntu oracular/main arm64 libpaper1 arm64 1.1.29build1 [13.4 kB] 1332s Get:29 http://ftpmaster.internal/ubuntu oracular/main arm64 libpaper-utils arm64 1.1.29build1 [8490 B] 1332s Get:30 http://ftpmaster.internal/ubuntu oracular/main arm64 libsm6 arm64 2:1.2.3-1build3 [15.6 kB] 1332s Get:31 http://ftpmaster.internal/ubuntu oracular/main arm64 libtcl8.6 arm64 8.6.14+dfsg-1build1 [978 kB] 1332s Get:32 http://ftpmaster.internal/ubuntu oracular/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 1332s Get:33 http://ftpmaster.internal/ubuntu oracular/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 1332s Get:34 http://ftpmaster.internal/ubuntu oracular/main arm64 libtk8.6 arm64 8.6.14-1build1 [767 kB] 1332s Get:35 http://ftpmaster.internal/ubuntu oracular/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 1332s Get:36 http://ftpmaster.internal/ubuntu oracular/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 1332s Get:37 http://ftpmaster.internal/ubuntu oracular/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 1332s Get:38 http://ftpmaster.internal/ubuntu oracular/main arm64 zip arm64 3.0-13build1 [171 kB] 1332s Get:39 http://ftpmaster.internal/ubuntu oracular/main arm64 unzip arm64 6.0-28ubuntu5 [176 kB] 1332s Get:40 http://ftpmaster.internal/ubuntu oracular/main arm64 xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 1332s Get:41 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-base-core arm64 4.4.1-1 [28.3 MB] 1333s Get:42 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-sys arm64 3.4.2-1 [44.3 kB] 1333s Get:43 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-askpass arm64 1.2.0-1 [24.4 kB] 1333s Get:44 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-cli arm64 3.6.2-1 [1377 kB] 1333s Get:45 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-colorspace arm64 2.1-0+dfsg-1 [1540 kB] 1333s Get:46 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-digest arm64 0.6.35-1 [195 kB] 1333s Get:47 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-jsonlite arm64 1.8.8+dfsg-1 [441 kB] 1333s Get:48 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-lazyeval arm64 0.2.2-1build1 [143 kB] 1333s Get:49 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-rex all 1.2.1-1 [129 kB] 1333s Get:50 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-curl arm64 5.2.1+dfsg-1 [179 kB] 1333s Get:51 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 1333s Get:52 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-openssl arm64 2.1.1+dfsg-2build2 [402 kB] 1333s Get:53 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-r6 all 2.5.1-1 [99.0 kB] 1333s Get:54 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 1333s Get:55 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-crayon all 1.5.2-1 [164 kB] 1333s Get:56 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-withr all 2.5.0-1 [225 kB] 1333s Get:57 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-yaml arm64 2.3.8-2 [108 kB] 1333s Get:58 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-covr arm64 3.6.4+dfsg-1 [302 kB] 1333s Get:59 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-evaluate all 0.23-1 [90.2 kB] 1333s Get:60 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-fansi arm64 1.0.5-1 [616 kB] 1333s Get:61 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-farver arm64 2.1.1-2 [1340 kB] 1333s Get:62 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB] 1333s Get:63 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-matrix arm64 1.7-0-3 [4109 kB] 1333s Get:64 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-survival arm64 3.7-0-1 [6268 kB] 1334s Get:65 http://ftpmaster.internal/ubuntu oracular-proposed/universe arm64 r-cran-gbm arm64 2.1.9-1 [571 kB] 1334s Get:66 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-glue arm64 1.7.0-1 [154 kB] 1334s Get:67 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-rlang arm64 1.1.4-1 [1707 kB] 1334s Get:68 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 1334s Get:69 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-gtable all 0.3.5+dfsg-1 [192 kB] 1334s Get:70 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-isoband arm64 0.2.7-1 [1481 kB] 1334s Get:71 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-mass arm64 7.3-61-1 [1107 kB] 1334s Get:72 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-nlme arm64 3.1.165-1 [2307 kB] 1334s Get:73 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-mgcv arm64 1.9-1-1 [3248 kB] 1334s Get:74 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-labeling all 0.4.3-1 [62.1 kB] 1334s Get:75 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-munsell all 0.5.1-1 [213 kB] 1334s Get:76 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 1334s Get:77 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-viridislite all 0.4.2-2 [1088 kB] 1334s Get:78 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-scales all 1.3.0-1 [603 kB] 1334s Get:79 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 1334s Get:80 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 1334s Get:81 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 1334s Get:82 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 1334s Get:83 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 1334s Get:84 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-2 [415 kB] 1334s Get:85 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 1334s Get:86 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-gridextra all 2.3-3build1 [1024 kB] 1334s Get:87 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-xfun arm64 0.44+dfsg-1 [517 kB] 1334s Get:88 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 1334s Get:89 http://ftpmaster.internal/ubuntu oracular/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 1334s Get:90 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-knitr all 1.46+dfsg-1 [911 kB] 1334s Get:91 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 1334s Get:92 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-tinytest all 1.4.1-1 [674 kB] 1334s Get:93 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-cran-viridis all 0.6.5-1 [2770 kB] 1336s Preconfiguring packages ... 1336s Fetched 89.6 MB in 3s (27.8 MB/s) 1336s Selecting previously unselected package fontconfig. 1336s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78264 files and directories currently installed.) 1336s Preparing to unpack .../00-fontconfig_2.15.0-1.1ubuntu2_arm64.deb ... 1336s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 1337s Selecting previously unselected package fonts-glyphicons-halflings. 1337s Preparing to unpack .../01-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 1337s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1337s Selecting previously unselected package fonts-mathjax. 1337s Preparing to unpack .../02-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 1337s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 1337s Selecting previously unselected package libblas3:arm64. 1337s Preparing to unpack .../03-libblas3_3.12.0-3build1_arm64.deb ... 1337s Unpacking libblas3:arm64 (3.12.0-3build1) ... 1338s Selecting previously unselected package libpixman-1-0:arm64. 1338s Preparing to unpack .../04-libpixman-1-0_0.42.2-1build1_arm64.deb ... 1338s Unpacking libpixman-1-0:arm64 (0.42.2-1build1) ... 1338s Selecting previously unselected package libxcb-render0:arm64. 1338s Preparing to unpack .../05-libxcb-render0_1.17.0-2_arm64.deb ... 1338s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 1338s Selecting previously unselected package libxcb-shm0:arm64. 1338s Preparing to unpack .../06-libxcb-shm0_1.17.0-2_arm64.deb ... 1338s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 1338s Selecting previously unselected package libxrender1:arm64. 1338s Preparing to unpack .../07-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ... 1338s Unpacking libxrender1:arm64 (1:0.9.10-1.1build1) ... 1338s Selecting previously unselected package libcairo2:arm64. 1338s Preparing to unpack .../08-libcairo2_1.18.0-3build1_arm64.deb ... 1338s Unpacking libcairo2:arm64 (1.18.0-3build1) ... 1338s Selecting previously unselected package libdatrie1:arm64. 1338s Preparing to unpack .../09-libdatrie1_0.2.13-3build1_arm64.deb ... 1338s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 1339s Selecting previously unselected package libgfortran5:arm64. 1339s Preparing to unpack .../10-libgfortran5_14.1.0-1ubuntu1_arm64.deb ... 1339s Unpacking libgfortran5:arm64 (14.1.0-1ubuntu1) ... 1339s Selecting previously unselected package libgomp1:arm64. 1339s Preparing to unpack .../11-libgomp1_14.1.0-1ubuntu1_arm64.deb ... 1339s Unpacking libgomp1:arm64 (14.1.0-1ubuntu1) ... 1339s Selecting previously unselected package libgraphite2-3:arm64. 1339s Preparing to unpack .../12-libgraphite2-3_1.3.14-2build1_arm64.deb ... 1339s Unpacking libgraphite2-3:arm64 (1.3.14-2build1) ... 1339s Selecting previously unselected package libharfbuzz0b:arm64. 1339s Preparing to unpack .../13-libharfbuzz0b_8.3.0-2build2_arm64.deb ... 1339s Unpacking libharfbuzz0b:arm64 (8.3.0-2build2) ... 1339s Selecting previously unselected package x11-common. 1339s Preparing to unpack .../14-x11-common_1%3a7.7+23ubuntu3_all.deb ... 1339s Unpacking x11-common (1:7.7+23ubuntu3) ... 1339s Selecting previously unselected package libice6:arm64. 1339s Preparing to unpack .../15-libice6_2%3a1.0.10-1build3_arm64.deb ... 1339s Unpacking libice6:arm64 (2:1.0.10-1build3) ... 1340s Selecting previously unselected package libjs-bootstrap. 1340s Preparing to unpack .../16-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 1340s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 1340s Selecting previously unselected package libjs-highlight.js. 1340s Preparing to unpack .../17-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 1340s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 1340s Selecting previously unselected package libjs-jquery. 1340s Preparing to unpack .../18-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 1340s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1340s Selecting previously unselected package libjs-jquery-datatables. 1340s Preparing to unpack .../19-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 1340s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 1340s Selecting previously unselected package liblapack3:arm64. 1340s Preparing to unpack .../20-liblapack3_3.12.0-3build1_arm64.deb ... 1340s Unpacking liblapack3:arm64 (3.12.0-3build1) ... 1340s Selecting previously unselected package libthai-data. 1340s Preparing to unpack .../21-libthai-data_0.1.29-2build1_all.deb ... 1340s Unpacking libthai-data (0.1.29-2build1) ... 1340s Selecting previously unselected package libthai0:arm64. 1340s Preparing to unpack .../22-libthai0_0.1.29-2build1_arm64.deb ... 1340s Unpacking libthai0:arm64 (0.1.29-2build1) ... 1341s Selecting previously unselected package libpango-1.0-0:arm64. 1341s Preparing to unpack .../23-libpango-1.0-0_1.54.0+ds-1_arm64.deb ... 1341s Unpacking libpango-1.0-0:arm64 (1.54.0+ds-1) ... 1341s Selecting previously unselected package libpangoft2-1.0-0:arm64. 1341s Preparing to unpack .../24-libpangoft2-1.0-0_1.54.0+ds-1_arm64.deb ... 1341s Unpacking libpangoft2-1.0-0:arm64 (1.54.0+ds-1) ... 1341s Selecting previously unselected package libpangocairo-1.0-0:arm64. 1341s Preparing to unpack .../25-libpangocairo-1.0-0_1.54.0+ds-1_arm64.deb ... 1341s Unpacking libpangocairo-1.0-0:arm64 (1.54.0+ds-1) ... 1341s Selecting previously unselected package libpaper1:arm64. 1341s Preparing to unpack .../26-libpaper1_1.1.29build1_arm64.deb ... 1341s Unpacking libpaper1:arm64 (1.1.29build1) ... 1341s Selecting previously unselected package libpaper-utils. 1342s Preparing to unpack .../27-libpaper-utils_1.1.29build1_arm64.deb ... 1342s Unpacking libpaper-utils (1.1.29build1) ... 1342s Selecting previously unselected package libsm6:arm64. 1342s Preparing to unpack .../28-libsm6_2%3a1.2.3-1build3_arm64.deb ... 1342s Unpacking libsm6:arm64 (2:1.2.3-1build3) ... 1342s Selecting previously unselected package libtcl8.6:arm64. 1342s Preparing to unpack .../29-libtcl8.6_8.6.14+dfsg-1build1_arm64.deb ... 1342s Unpacking libtcl8.6:arm64 (8.6.14+dfsg-1build1) ... 1342s Selecting previously unselected package libxft2:arm64. 1342s Preparing to unpack .../30-libxft2_2.3.6-1build1_arm64.deb ... 1342s Unpacking libxft2:arm64 (2.3.6-1build1) ... 1342s Selecting previously unselected package libxss1:arm64. 1343s Preparing to unpack .../31-libxss1_1%3a1.2.3-1build3_arm64.deb ... 1343s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 1343s Selecting previously unselected package libtk8.6:arm64. 1343s Preparing to unpack .../32-libtk8.6_8.6.14-1build1_arm64.deb ... 1343s Unpacking libtk8.6:arm64 (8.6.14-1build1) ... 1343s Selecting previously unselected package libxt6t64:arm64. 1343s Preparing to unpack .../33-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 1343s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 1343s Selecting previously unselected package node-html5shiv. 1343s Preparing to unpack .../34-node-html5shiv_3.7.3+dfsg-5_all.deb ... 1343s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 1343s Selecting previously unselected package node-normalize.css. 1343s Preparing to unpack .../35-node-normalize.css_8.0.1-5_all.deb ... 1343s Unpacking node-normalize.css (8.0.1-5) ... 1343s Selecting previously unselected package zip. 1343s Preparing to unpack .../36-zip_3.0-13build1_arm64.deb ... 1343s Unpacking zip (3.0-13build1) ... 1343s Selecting previously unselected package unzip. 1343s Preparing to unpack .../37-unzip_6.0-28ubuntu5_arm64.deb ... 1343s Unpacking unzip (6.0-28ubuntu5) ... 1343s Selecting previously unselected package xdg-utils. 1344s Preparing to unpack .../38-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 1344s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 1344s Selecting previously unselected package r-base-core. 1344s Preparing to unpack .../39-r-base-core_4.4.1-1_arm64.deb ... 1344s Unpacking r-base-core (4.4.1-1) ... 1344s Selecting previously unselected package r-cran-sys. 1345s Preparing to unpack .../40-r-cran-sys_3.4.2-1_arm64.deb ... 1345s Unpacking r-cran-sys (3.4.2-1) ... 1345s Selecting previously unselected package r-cran-askpass. 1345s Preparing to unpack .../41-r-cran-askpass_1.2.0-1_arm64.deb ... 1345s Unpacking r-cran-askpass (1.2.0-1) ... 1345s Selecting previously unselected package r-cran-cli. 1345s Preparing to unpack .../42-r-cran-cli_3.6.2-1_arm64.deb ... 1345s Unpacking r-cran-cli (3.6.2-1) ... 1345s Selecting previously unselected package r-cran-colorspace. 1345s Preparing to unpack .../43-r-cran-colorspace_2.1-0+dfsg-1_arm64.deb ... 1345s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 1345s Selecting previously unselected package r-cran-digest. 1345s Preparing to unpack .../44-r-cran-digest_0.6.35-1_arm64.deb ... 1345s Unpacking r-cran-digest (0.6.35-1) ... 1345s Selecting previously unselected package r-cran-jsonlite. 1346s Preparing to unpack .../45-r-cran-jsonlite_1.8.8+dfsg-1_arm64.deb ... 1346s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 1346s Selecting previously unselected package r-cran-lazyeval. 1346s Preparing to unpack .../46-r-cran-lazyeval_0.2.2-1build1_arm64.deb ... 1346s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 1346s Selecting previously unselected package r-cran-rex. 1347s Preparing to unpack .../47-r-cran-rex_1.2.1-1_all.deb ... 1347s Unpacking r-cran-rex (1.2.1-1) ... 1347s Selecting previously unselected package r-cran-curl. 1347s Preparing to unpack .../48-r-cran-curl_5.2.1+dfsg-1_arm64.deb ... 1347s Unpacking r-cran-curl (5.2.1+dfsg-1) ... 1347s Selecting previously unselected package r-cran-mime. 1347s Preparing to unpack .../49-r-cran-mime_0.12-2_arm64.deb ... 1347s Unpacking r-cran-mime (0.12-2) ... 1348s Selecting previously unselected package r-cran-openssl. 1348s Preparing to unpack .../50-r-cran-openssl_2.1.1+dfsg-2build2_arm64.deb ... 1348s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ... 1348s Selecting previously unselected package r-cran-r6. 1348s Preparing to unpack .../51-r-cran-r6_2.5.1-1_all.deb ... 1348s Unpacking r-cran-r6 (2.5.1-1) ... 1348s Selecting previously unselected package r-cran-httr. 1349s Preparing to unpack .../52-r-cran-httr_1.4.7+dfsg-1_all.deb ... 1349s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 1349s Selecting previously unselected package r-cran-crayon. 1349s Preparing to unpack .../53-r-cran-crayon_1.5.2-1_all.deb ... 1349s Unpacking r-cran-crayon (1.5.2-1) ... 1349s Selecting previously unselected package r-cran-withr. 1350s Preparing to unpack .../54-r-cran-withr_2.5.0-1_all.deb ... 1350s Unpacking r-cran-withr (2.5.0-1) ... 1350s Selecting previously unselected package r-cran-yaml. 1351s Preparing to unpack .../55-r-cran-yaml_2.3.8-2_arm64.deb ... 1351s Unpacking r-cran-yaml (2.3.8-2) ... 1351s Selecting previously unselected package r-cran-covr. 1351s Preparing to unpack .../56-r-cran-covr_3.6.4+dfsg-1_arm64.deb ... 1351s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 1351s Selecting previously unselected package r-cran-evaluate. 1351s Preparing to unpack .../57-r-cran-evaluate_0.23-1_all.deb ... 1351s Unpacking r-cran-evaluate (0.23-1) ... 1351s Selecting previously unselected package r-cran-fansi. 1352s Preparing to unpack .../58-r-cran-fansi_1.0.5-1_arm64.deb ... 1352s Unpacking r-cran-fansi (1.0.5-1) ... 1352s Selecting previously unselected package r-cran-farver. 1352s Preparing to unpack .../59-r-cran-farver_2.1.1-2_arm64.deb ... 1352s Unpacking r-cran-farver (2.1.1-2) ... 1352s Selecting previously unselected package r-cran-lattice. 1353s Preparing to unpack .../60-r-cran-lattice_0.22-6-1_arm64.deb ... 1353s Unpacking r-cran-lattice (0.22-6-1) ... 1353s Selecting previously unselected package r-cran-matrix. 1353s Preparing to unpack .../61-r-cran-matrix_1.7-0-3_arm64.deb ... 1353s Unpacking r-cran-matrix (1.7-0-3) ... 1353s Selecting previously unselected package r-cran-survival. 1354s Preparing to unpack .../62-r-cran-survival_3.7-0-1_arm64.deb ... 1354s Unpacking r-cran-survival (3.7-0-1) ... 1354s Selecting previously unselected package r-cran-gbm. 1354s Preparing to unpack .../63-r-cran-gbm_2.1.9-1_arm64.deb ... 1354s Unpacking r-cran-gbm (2.1.9-1) ... 1354s Selecting previously unselected package r-cran-glue. 1355s Preparing to unpack .../64-r-cran-glue_1.7.0-1_arm64.deb ... 1355s Unpacking r-cran-glue (1.7.0-1) ... 1355s Selecting previously unselected package r-cran-rlang. 1355s Preparing to unpack .../65-r-cran-rlang_1.1.4-1_arm64.deb ... 1355s Unpacking r-cran-rlang (1.1.4-1) ... 1355s Selecting previously unselected package r-cran-lifecycle. 1355s Preparing to unpack .../66-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 1355s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 1355s Selecting previously unselected package r-cran-gtable. 1355s Preparing to unpack .../67-r-cran-gtable_0.3.5+dfsg-1_all.deb ... 1355s Unpacking r-cran-gtable (0.3.5+dfsg-1) ... 1355s Selecting previously unselected package r-cran-isoband. 1355s Preparing to unpack .../68-r-cran-isoband_0.2.7-1_arm64.deb ... 1355s Unpacking r-cran-isoband (0.2.7-1) ... 1355s Selecting previously unselected package r-cran-mass. 1355s Preparing to unpack .../69-r-cran-mass_7.3-61-1_arm64.deb ... 1355s Unpacking r-cran-mass (7.3-61-1) ... 1355s Selecting previously unselected package r-cran-nlme. 1356s Preparing to unpack .../70-r-cran-nlme_3.1.165-1_arm64.deb ... 1356s Unpacking r-cran-nlme (3.1.165-1) ... 1356s Selecting previously unselected package r-cran-mgcv. 1356s Preparing to unpack .../71-r-cran-mgcv_1.9-1-1_arm64.deb ... 1356s Unpacking r-cran-mgcv (1.9-1-1) ... 1356s Selecting previously unselected package r-cran-labeling. 1357s Preparing to unpack .../72-r-cran-labeling_0.4.3-1_all.deb ... 1357s Unpacking r-cran-labeling (0.4.3-1) ... 1358s Selecting previously unselected package r-cran-munsell. 1359s Preparing to unpack .../73-r-cran-munsell_0.5.1-1_all.deb ... 1359s Unpacking r-cran-munsell (0.5.1-1) ... 1359s Selecting previously unselected package r-cran-rcolorbrewer. 1359s Preparing to unpack .../74-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 1359s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 1359s Selecting previously unselected package r-cran-viridislite. 1360s Preparing to unpack .../75-r-cran-viridislite_0.4.2-2_all.deb ... 1360s Unpacking r-cran-viridislite (0.4.2-2) ... 1360s Selecting previously unselected package r-cran-scales. 1361s Preparing to unpack .../76-r-cran-scales_1.3.0-1_all.deb ... 1361s Unpacking r-cran-scales (1.3.0-1) ... 1361s Selecting previously unselected package r-cran-magrittr. 1362s Preparing to unpack .../77-r-cran-magrittr_2.0.3-1_arm64.deb ... 1362s Unpacking r-cran-magrittr (2.0.3-1) ... 1363s Selecting previously unselected package r-cran-utf8. 1364s Preparing to unpack .../78-r-cran-utf8_1.2.4-1_arm64.deb ... 1364s Unpacking r-cran-utf8 (1.2.4-1) ... 1364s Selecting previously unselected package r-cran-vctrs. 1364s Preparing to unpack .../79-r-cran-vctrs_0.6.5-1_arm64.deb ... 1364s Unpacking r-cran-vctrs (0.6.5-1) ... 1364s Selecting previously unselected package r-cran-pillar. 1364s Preparing to unpack .../80-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 1364s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 1364s Selecting previously unselected package r-cran-pkgconfig. 1364s Preparing to unpack .../81-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 1364s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 1364s Selecting previously unselected package r-cran-tibble. 1364s Preparing to unpack .../82-r-cran-tibble_3.2.1+dfsg-2_arm64.deb ... 1364s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 1364s Selecting previously unselected package r-cran-ggplot2. 1365s Preparing to unpack .../83-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 1365s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 1365s Selecting previously unselected package r-cran-gridextra. 1365s Preparing to unpack .../84-r-cran-gridextra_2.3-3build1_all.deb ... 1365s Unpacking r-cran-gridextra (2.3-3build1) ... 1365s Selecting previously unselected package r-cran-xfun. 1366s Preparing to unpack .../85-r-cran-xfun_0.44+dfsg-1_arm64.deb ... 1366s Unpacking r-cran-xfun (0.44+dfsg-1) ... 1366s Selecting previously unselected package r-cran-highr. 1367s Preparing to unpack .../86-r-cran-highr_0.11+dfsg-1_all.deb ... 1367s Unpacking r-cran-highr (0.11+dfsg-1) ... 1367s Selecting previously unselected package libjs-mathjax. 1367s Preparing to unpack .../87-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 1367s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 1368s Selecting previously unselected package r-cran-knitr. 1368s Preparing to unpack .../88-r-cran-knitr_1.46+dfsg-1_all.deb ... 1368s Unpacking r-cran-knitr (1.46+dfsg-1) ... 1368s Selecting previously unselected package r-cran-runit. 1368s Preparing to unpack .../89-r-cran-runit_0.4.33-1_all.deb ... 1368s Unpacking r-cran-runit (0.4.33-1) ... 1368s Selecting previously unselected package r-cran-tinytest. 1369s Preparing to unpack .../90-r-cran-tinytest_1.4.1-1_all.deb ... 1369s Unpacking r-cran-tinytest (1.4.1-1) ... 1369s Selecting previously unselected package r-cran-viridis. 1369s Preparing to unpack .../91-r-cran-viridis_0.6.5-1_all.deb ... 1369s Unpacking r-cran-viridis (0.6.5-1) ... 1369s Selecting previously unselected package autopkgtest-satdep. 1369s Preparing to unpack .../92-1-autopkgtest-satdep.deb ... 1369s Unpacking autopkgtest-satdep (0) ... 1370s Setting up libgraphite2-3:arm64 (1.3.14-2build1) ... 1370s Setting up libpixman-1-0:arm64 (0.42.2-1build1) ... 1370s Setting up libpaper1:arm64 (1.1.29build1) ... 1371s 1371s Creating config file /etc/papersize with new version 1371s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 1373s Regenerating fonts cache... done. 1373s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 1373s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 1373s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ... 1373s Setting up libdatrie1:arm64 (0.2.13-3build1) ... 1373s Setting up libxcb-render0:arm64 (1.17.0-2) ... 1373s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 1373s Setting up unzip (6.0-28ubuntu5) ... 1373s Setting up x11-common (1:7.7+23ubuntu3) ... 1374s Setting up node-html5shiv (3.7.3+dfsg-5) ... 1374s Setting up libxcb-shm0:arm64 (1.17.0-2) ... 1374s Setting up libpaper-utils (1.1.29build1) ... 1374s Setting up libgomp1:arm64 (14.1.0-1ubuntu1) ... 1374s Setting up libcairo2:arm64 (1.18.0-3build1) ... 1374s Setting up zip (3.0-13build1) ... 1374s Setting up libblas3:arm64 (3.12.0-3build1) ... 1374s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1374s Setting up libtcl8.6:arm64 (8.6.14+dfsg-1build1) ... 1374s Setting up libgfortran5:arm64 (14.1.0-1ubuntu1) ... 1374s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 1374s Setting up libharfbuzz0b:arm64 (8.3.0-2build2) ... 1374s Setting up libthai-data (0.1.29-2build1) ... 1374s Setting up libxss1:arm64 (1:1.2.3-1build3) ... 1374s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 1374s Setting up node-normalize.css (8.0.1-5) ... 1374s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 1374s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 1374s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 1374s Setting up libice6:arm64 (2:1.0.10-1build3) ... 1374s Setting up liblapack3:arm64 (3.12.0-3build1) ... 1374s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1374s Setting up libxft2:arm64 (2.3.6-1build1) ... 1374s Setting up libtk8.6:arm64 (8.6.14-1build1) ... 1374s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 1374s Setting up libthai0:arm64 (0.1.29-2build1) ... 1374s Setting up libsm6:arm64 (2:1.2.3-1build3) ... 1374s Setting up libpango-1.0-0:arm64 (1.54.0+ds-1) ... 1374s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 1374s Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-1) ... 1374s Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-1) ... 1374s Setting up r-base-core (4.4.1-1) ... 1376s 1376s Creating config file /etc/R/Renviron with new version 1376s Setting up r-cran-crayon (1.5.2-1) ... 1376s Setting up r-cran-labeling (0.4.3-1) ... 1376s Setting up r-cran-lattice (0.22-6-1) ... 1376s Setting up r-cran-tinytest (1.4.1-1) ... 1376s Setting up r-cran-nlme (3.1.165-1) ... 1376s Setting up r-cran-farver (2.1.1-2) ... 1376s Setting up r-cran-viridislite (0.4.2-2) ... 1376s Setting up r-cran-lazyeval (0.2.2-1build1) ... 1376s Setting up r-cran-r6 (2.5.1-1) ... 1376s Setting up r-cran-magrittr (2.0.3-1) ... 1376s Setting up r-cran-curl (5.2.1+dfsg-1) ... 1376s Setting up r-cran-rlang (1.1.4-1) ... 1376s Setting up r-cran-xfun (0.44+dfsg-1) ... 1376s Setting up r-cran-sys (3.4.2-1) ... 1376s Setting up r-cran-withr (2.5.0-1) ... 1376s Setting up r-cran-mime (0.12-2) ... 1376s Setting up r-cran-digest (0.6.35-1) ... 1376s Setting up r-cran-yaml (2.3.8-2) ... 1376s Setting up r-cran-evaluate (0.23-1) ... 1376s Setting up r-cran-highr (0.11+dfsg-1) ... 1376s Setting up r-cran-fansi (1.0.5-1) ... 1376s Setting up r-cran-mass (7.3-61-1) ... 1376s Setting up r-cran-glue (1.7.0-1) ... 1376s Setting up r-cran-cli (3.6.2-1) ... 1376s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 1376s Setting up r-cran-askpass (1.2.0-1) ... 1376s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 1376s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 1376s Setting up r-cran-utf8 (1.2.4-1) ... 1376s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 1376s Setting up r-cran-rex (1.2.1-1) ... 1376s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 1376s Setting up r-cran-isoband (0.2.7-1) ... 1376s Setting up r-cran-runit (0.4.33-1) ... 1376s Setting up r-cran-gtable (0.3.5+dfsg-1) ... 1376s Setting up r-cran-matrix (1.7-0-3) ... 1376s Setting up r-cran-knitr (1.46+dfsg-1) ... 1376s Setting up r-cran-mgcv (1.9-1-1) ... 1376s Setting up r-cran-vctrs (0.6.5-1) ... 1376s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 1376s Setting up r-cran-openssl (2.1.1+dfsg-2build2) ... 1376s Setting up r-cran-munsell (0.5.1-1) ... 1376s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 1376s Setting up r-cran-survival (3.7-0-1) ... 1376s Setting up r-cran-httr (1.4.7+dfsg-1) ... 1376s Setting up r-cran-gridextra (2.3-3build1) ... 1376s Setting up r-cran-scales (1.3.0-1) ... 1376s Setting up r-cran-covr (3.6.4+dfsg-1) ... 1376s Setting up r-cran-gbm (2.1.9-1) ... 1376s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 1376s Setting up r-cran-viridis (0.6.5-1) ... 1376s Setting up autopkgtest-satdep (0) ... 1376s Processing triggers for man-db (2.12.1-2) ... 1378s Processing triggers for install-info (7.1-3build2) ... 1378s Processing triggers for libc-bin (2.39-0ubuntu9) ... 1386s (Reading database ... 89667 files and directories currently installed.) 1386s Removing autopkgtest-satdep (0) ... 1387s autopkgtest [11:21:15]: test run-unit-test: [----------------------- 1387s BEGIN TEST tinytest.R 1388s 1388s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 1388s Copyright (C) 2024 The R Foundation for Statistical Computing 1388s Platform: aarch64-unknown-linux-gnu 1388s 1388s R is free software and comes with ABSOLUTELY NO WARRANTY. 1388s You are welcome to redistribute it under certain conditions. 1388s Type 'license()' or 'licence()' for distribution details. 1388s 1388s R is a collaborative project with many contributors. 1388s Type 'contributors()' for more information and 1388s 'citation()' on how to cite R or R packages in publications. 1388s 1388s Type 'demo()' for some demos, 'help()' for on-line help, or 1388s 'help.start()' for an HTML browser interface to help. 1388s Type 'q()' to quit R. 1388s 1388s > 1388s > if ( requireNamespace("tinytest", quietly = TRUE) ){ 1388s + home <- length(unclass(packageVersion("gbm"))[[1L]]) == 4 1388s + tinytest::test_package("gbm", at_home = home) 1388s + } 1389s test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests Loaded gbm 2.1.9 1389s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3 1389s CV: 1 1390s CV: 2 1390s CV: 3 1390s CV: 4 1390s CV: 5 1391s test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 0 tests test_bernoulli.R.............. 1 tests OK 1.9s 1391s test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests CV: 1 1392s CV: 2 1393s CV: 3 1393s CV: 4 1394s CV: 5 1396s test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 0 tests test_coxph.R.................. 1 tests OK 5.3s 1396s test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests CV: 1 1397s CV: 2 1397s CV: 3 1398s CV: 4 1398s CV: 5 1399s CV: 6 1399s CV: 7 1399s CV: 8 1400s CV: 9 1400s CV: 10 1401s test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 0 tests test_least_squares.R.......... 1 tests 1 fails test_least_squares.R.......... 2 tests 2 fails 5.0s 1401s test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests Distribution not specified, assuming bernoulli ... 1401s CV: 1 1403s CV: 2 1404s CV: 3 1405s CV: 4 1406s CV: 5 1408s test_relative_influence.R..... 0 tests n.trees not given. Using 1000 trees. 1408s test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 0 tests test_relative_influence.R..... 1 tests OK 6.9s 1408s Error: 2 out of 5 tests failed 1408s Execution halted 1408s ----- FAILED[data]: test_least_squares.R<68--69> 1408s call| expect_true(abs(mean(data2$Y - f.predict)) < 0.01, info = "LS: checking if Gaussian absolute error within tolerance.") 1408s diff| Expected TRUE, got FALSE 1408s info| LS: checking if Gaussian absolute error within tolerance. 1408s ----- FAILED[data]: test_least_squares.R<70--71> 1408s call| expect_true(sd(data2$Y - f.predict) < sigma, info = "LS: checking if Gaussian squared error within tolerance.") 1408s diff| Expected TRUE, got FALSE 1408s info| LS: checking if Gaussian squared error within tolerance. 1409s autopkgtest [11:21:37]: test run-unit-test: -----------------------] 1410s run-unit-test FAIL non-zero exit status 1 1410s autopkgtest [11:21:38]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 1410s autopkgtest [11:21:38]: test pkg-r-autopkgtest: preparing testbed 1412s Reading package lists... 1412s Building dependency tree... 1412s Reading state information... 1412s Starting pkgProblemResolver with broken count: 0 1412s Starting 2 pkgProblemResolver with broken count: 0 1412s Done 1413s The following additional packages will be installed: 1413s build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu 1413s dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc 1413s gcc-13 gcc-13-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-13 1413s gfortran-13-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 1413s libasan8 libatomic1 libblas-dev libbz2-dev libcc1-0 libdeflate-dev 1413s libgcc-13-dev libgfortran-13-dev libhwasan0 libicu-dev libisl23 libitm1 1413s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblsan0 1413s liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev 1413s libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev 1413s libtirpc-dev libtsan2 libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin 1413s r-base-dev zlib1g-dev 1413s Suggested packages: 1413s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 1413s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 1413s gdb-aarch64-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 1413s liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 1413s texlive-base texlive-latex-base texlive-plain-generic 1413s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 1413s texlive-latex-recommended texlive-latex-extra texinfo 1413s Recommended packages: 1413s bzip2-doc libpng-tools 1413s The following NEW packages will be installed: 1413s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-aarch64-linux-gnu 1413s cpp-aarch64-linux-gnu dctrl-tools g++ g++-13 g++-13-aarch64-linux-gnu 1413s g++-aarch64-linux-gnu gcc gcc-13 gcc-13-aarch64-linux-gnu 1413s gcc-aarch64-linux-gnu gfortran gfortran-13 gfortran-13-aarch64-linux-gnu 1413s gfortran-aarch64-linux-gnu icu-devtools libasan8 libatomic1 libblas-dev 1413s libbz2-dev libcc1-0 libdeflate-dev libgcc-13-dev libgfortran-13-dev 1413s libhwasan0 libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev 1413s libjpeg8-dev liblapack-dev liblsan0 liblzma-dev libmpc3 libncurses-dev 1413s libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpkgconf3 1413s libpng-dev libreadline-dev libstdc++-13-dev libtirpc-dev libtsan2 libubsan1 1413s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev 1413s 0 upgraded, 56 newly installed, 0 to remove and 0 not upgraded. 1413s Need to get 89.5 MB/89.5 MB of archives. 1413s After this operation, 325 MB of additional disk space will be used. 1413s Get:1 /tmp/autopkgtest.suppRa/2-autopkgtest-satdep.deb autopkgtest-satdep arm64 0 [752 B] 1413s Get:2 http://ftpmaster.internal/ubuntu oracular/main arm64 libisl23 arm64 0.26-3build1 [669 kB] 1414s Get:3 http://ftpmaster.internal/ubuntu oracular/main arm64 libmpc3 arm64 1.3.1-1build1 [56.4 kB] 1414s Get:4 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [10.3 MB] 1414s Get:5 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-13 arm64 13.2.0-23ubuntu4 [1032 B] 1414s Get:6 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [5316 B] 1414s Get:7 http://ftpmaster.internal/ubuntu oracular/main arm64 cpp arm64 4:13.2.0-7ubuntu1 [22.4 kB] 1414s Get:8 http://ftpmaster.internal/ubuntu oracular/main arm64 libcc1-0 arm64 14.1.0-1ubuntu1 [49.4 kB] 1414s Get:9 http://ftpmaster.internal/ubuntu oracular/main arm64 libitm1 arm64 14.1.0-1ubuntu1 [27.9 kB] 1414s Get:10 http://ftpmaster.internal/ubuntu oracular/main arm64 libatomic1 arm64 14.1.0-1ubuntu1 [11.4 kB] 1414s Get:11 http://ftpmaster.internal/ubuntu oracular/main arm64 libasan8 arm64 14.1.0-1ubuntu1 [2922 kB] 1414s Get:12 http://ftpmaster.internal/ubuntu oracular/main arm64 liblsan0 arm64 14.1.0-1ubuntu1 [1286 kB] 1414s Get:13 http://ftpmaster.internal/ubuntu oracular/main arm64 libtsan2 arm64 14.1.0-1ubuntu1 [2692 kB] 1414s Get:14 http://ftpmaster.internal/ubuntu oracular/main arm64 libubsan1 arm64 14.1.0-1ubuntu1 [1155 kB] 1414s Get:15 http://ftpmaster.internal/ubuntu oracular/main arm64 libhwasan0 arm64 14.1.0-1ubuntu1 [1604 kB] 1414s Get:16 http://ftpmaster.internal/ubuntu oracular/main arm64 libgcc-13-dev arm64 13.2.0-23ubuntu4 [2470 kB] 1414s Get:17 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [20.1 MB] 1415s Get:18 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-13 arm64 13.2.0-23ubuntu4 [472 kB] 1415s Get:19 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1198 B] 1415s Get:20 http://ftpmaster.internal/ubuntu oracular/main arm64 gcc arm64 4:13.2.0-7ubuntu1 [5018 B] 1415s Get:21 http://ftpmaster.internal/ubuntu oracular/main arm64 libstdc++-13-dev arm64 13.2.0-23ubuntu4 [2379 kB] 1415s Get:22 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [11.7 MB] 1415s Get:23 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-13 arm64 13.2.0-23ubuntu4 [14.5 kB] 1415s Get:24 http://ftpmaster.internal/ubuntu oracular/main arm64 g++-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [962 B] 1415s Get:25 http://ftpmaster.internal/ubuntu oracular/main arm64 g++ arm64 4:13.2.0-7ubuntu1 [1082 B] 1415s Get:26 http://ftpmaster.internal/ubuntu oracular/main arm64 build-essential arm64 12.10ubuntu1 [4932 B] 1415s Get:27 http://ftpmaster.internal/ubuntu oracular/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 1415s Get:28 http://ftpmaster.internal/ubuntu oracular/main arm64 libgfortran-13-dev arm64 13.2.0-23ubuntu4 [478 kB] 1415s Get:29 http://ftpmaster.internal/ubuntu oracular/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-23ubuntu4 [10.8 MB] 1415s Get:30 http://ftpmaster.internal/ubuntu oracular/main arm64 gfortran-13 arm64 13.2.0-23ubuntu4 [11.7 kB] 1415s Get:31 http://ftpmaster.internal/ubuntu oracular/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7ubuntu1 [1022 B] 1415s Get:32 http://ftpmaster.internal/ubuntu oracular/main arm64 gfortran arm64 4:13.2.0-7ubuntu1 [1164 B] 1415s Get:33 http://ftpmaster.internal/ubuntu oracular/main arm64 icu-devtools arm64 74.2-1ubuntu3 [209 kB] 1415s Get:34 http://ftpmaster.internal/ubuntu oracular/main arm64 libblas-dev arm64 3.12.0-3build1 [111 kB] 1415s Get:35 http://ftpmaster.internal/ubuntu oracular/main arm64 libbz2-dev arm64 1.0.8-5.1 [35.8 kB] 1415s Get:36 http://ftpmaster.internal/ubuntu oracular/main arm64 libdeflate-dev arm64 1.20-1 [53.2 kB] 1415s Get:37 http://ftpmaster.internal/ubuntu oracular/main arm64 libicu-dev arm64 74.2-1ubuntu3 [11.9 MB] 1416s Get:38 http://ftpmaster.internal/ubuntu oracular/main arm64 libjpeg-turbo8-dev arm64 2.1.5-2ubuntu2 [305 kB] 1416s Get:39 http://ftpmaster.internal/ubuntu oracular/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 1416s Get:40 http://ftpmaster.internal/ubuntu oracular/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 1416s Get:41 http://ftpmaster.internal/ubuntu oracular/main arm64 liblapack-dev arm64 3.12.0-3build1 [4293 kB] 1416s Get:42 http://ftpmaster.internal/ubuntu oracular/main arm64 libncurses-dev arm64 6.5-2 [385 kB] 1416s Get:43 http://ftpmaster.internal/ubuntu oracular/main arm64 libpcre2-16-0 arm64 10.42-4ubuntu2 [196 kB] 1416s Get:44 http://ftpmaster.internal/ubuntu oracular/main arm64 libpcre2-32-0 arm64 10.42-4ubuntu2 [184 kB] 1416s Get:45 http://ftpmaster.internal/ubuntu oracular/main arm64 libpcre2-posix3 arm64 10.42-4ubuntu2 [6642 B] 1416s Get:46 http://ftpmaster.internal/ubuntu oracular/main arm64 libpcre2-dev arm64 10.42-4ubuntu2 [680 kB] 1416s Get:47 http://ftpmaster.internal/ubuntu oracular/main arm64 libpkgconf3 arm64 1.8.1-3 [31.2 kB] 1416s Get:48 http://ftpmaster.internal/ubuntu oracular/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1ubuntu2 [894 kB] 1416s Get:49 http://ftpmaster.internal/ubuntu oracular/main arm64 libpng-dev arm64 1.6.43-5build1 [266 kB] 1416s Get:50 http://ftpmaster.internal/ubuntu oracular/main arm64 libreadline-dev arm64 8.2-4build1 [177 kB] 1416s Get:51 http://ftpmaster.internal/ubuntu oracular/main arm64 liblzma-dev arm64 5.6.1+really5.4.5-1 [178 kB] 1416s Get:52 http://ftpmaster.internal/ubuntu oracular/main arm64 pkgconf-bin arm64 1.8.1-3 [20.7 kB] 1416s Get:53 http://ftpmaster.internal/ubuntu oracular/main arm64 pkgconf arm64 1.8.1-3 [16.7 kB] 1416s Get:54 http://ftpmaster.internal/ubuntu oracular/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB] 1416s Get:55 http://ftpmaster.internal/ubuntu oracular/universe arm64 r-base-dev all 4.4.1-1 [4338 B] 1416s Get:56 http://ftpmaster.internal/ubuntu oracular/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1417s Fetched 89.5 MB in 3s (32.5 MB/s) 1417s Selecting previously unselected package libisl23:arm64. 1417s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 89667 files and directories currently installed.) 1417s Preparing to unpack .../00-libisl23_0.26-3build1_arm64.deb ... 1417s Unpacking libisl23:arm64 (0.26-3build1) ... 1417s Selecting previously unselected package libmpc3:arm64. 1417s Preparing to unpack .../01-libmpc3_1.3.1-1build1_arm64.deb ... 1417s Unpacking libmpc3:arm64 (1.3.1-1build1) ... 1418s Selecting previously unselected package cpp-13-aarch64-linux-gnu. 1418s Preparing to unpack .../02-cpp-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 1418s Unpacking cpp-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1418s Selecting previously unselected package cpp-13. 1418s Preparing to unpack .../03-cpp-13_13.2.0-23ubuntu4_arm64.deb ... 1418s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 1418s Selecting previously unselected package cpp-aarch64-linux-gnu. 1418s Preparing to unpack .../04-cpp-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 1418s Unpacking cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1418s Selecting previously unselected package cpp. 1419s Preparing to unpack .../05-cpp_4%3a13.2.0-7ubuntu1_arm64.deb ... 1419s Unpacking cpp (4:13.2.0-7ubuntu1) ... 1419s Selecting previously unselected package libcc1-0:arm64. 1419s Preparing to unpack .../06-libcc1-0_14.1.0-1ubuntu1_arm64.deb ... 1419s Unpacking libcc1-0:arm64 (14.1.0-1ubuntu1) ... 1419s Selecting previously unselected package libitm1:arm64. 1420s Preparing to unpack .../07-libitm1_14.1.0-1ubuntu1_arm64.deb ... 1420s Unpacking libitm1:arm64 (14.1.0-1ubuntu1) ... 1420s Selecting previously unselected package libatomic1:arm64. 1420s Preparing to unpack .../08-libatomic1_14.1.0-1ubuntu1_arm64.deb ... 1420s Unpacking libatomic1:arm64 (14.1.0-1ubuntu1) ... 1420s Selecting previously unselected package libasan8:arm64. 1420s Preparing to unpack .../09-libasan8_14.1.0-1ubuntu1_arm64.deb ... 1420s Unpacking libasan8:arm64 (14.1.0-1ubuntu1) ... 1420s Selecting previously unselected package liblsan0:arm64. 1420s Preparing to unpack .../10-liblsan0_14.1.0-1ubuntu1_arm64.deb ... 1420s Unpacking liblsan0:arm64 (14.1.0-1ubuntu1) ... 1420s Selecting previously unselected package libtsan2:arm64. 1421s Preparing to unpack .../11-libtsan2_14.1.0-1ubuntu1_arm64.deb ... 1421s Unpacking libtsan2:arm64 (14.1.0-1ubuntu1) ... 1421s Selecting previously unselected package libubsan1:arm64. 1421s Preparing to unpack .../12-libubsan1_14.1.0-1ubuntu1_arm64.deb ... 1421s Unpacking libubsan1:arm64 (14.1.0-1ubuntu1) ... 1421s Selecting previously unselected package libhwasan0:arm64. 1422s Preparing to unpack .../13-libhwasan0_14.1.0-1ubuntu1_arm64.deb ... 1422s Unpacking libhwasan0:arm64 (14.1.0-1ubuntu1) ... 1422s Selecting previously unselected package libgcc-13-dev:arm64. 1422s Preparing to unpack .../14-libgcc-13-dev_13.2.0-23ubuntu4_arm64.deb ... 1422s Unpacking libgcc-13-dev:arm64 (13.2.0-23ubuntu4) ... 1422s Selecting previously unselected package gcc-13-aarch64-linux-gnu. 1423s Preparing to unpack .../15-gcc-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 1423s Unpacking gcc-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1423s Selecting previously unselected package gcc-13. 1423s Preparing to unpack .../16-gcc-13_13.2.0-23ubuntu4_arm64.deb ... 1423s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 1423s Selecting previously unselected package gcc-aarch64-linux-gnu. 1424s Preparing to unpack .../17-gcc-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 1424s Unpacking gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1424s Selecting previously unselected package gcc. 1424s Preparing to unpack .../18-gcc_4%3a13.2.0-7ubuntu1_arm64.deb ... 1424s Unpacking gcc (4:13.2.0-7ubuntu1) ... 1424s Selecting previously unselected package libstdc++-13-dev:arm64. 1424s Preparing to unpack .../19-libstdc++-13-dev_13.2.0-23ubuntu4_arm64.deb ... 1424s Unpacking libstdc++-13-dev:arm64 (13.2.0-23ubuntu4) ... 1424s Selecting previously unselected package g++-13-aarch64-linux-gnu. 1424s Preparing to unpack .../20-g++-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 1424s Unpacking g++-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1425s Selecting previously unselected package g++-13. 1425s Preparing to unpack .../21-g++-13_13.2.0-23ubuntu4_arm64.deb ... 1425s Unpacking g++-13 (13.2.0-23ubuntu4) ... 1425s Selecting previously unselected package g++-aarch64-linux-gnu. 1425s Preparing to unpack .../22-g++-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 1425s Unpacking g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1425s Selecting previously unselected package g++. 1425s Preparing to unpack .../23-g++_4%3a13.2.0-7ubuntu1_arm64.deb ... 1425s Unpacking g++ (4:13.2.0-7ubuntu1) ... 1425s Selecting previously unselected package build-essential. 1425s Preparing to unpack .../24-build-essential_12.10ubuntu1_arm64.deb ... 1425s Unpacking build-essential (12.10ubuntu1) ... 1425s Selecting previously unselected package dctrl-tools. 1426s Preparing to unpack .../25-dctrl-tools_2.24-3build3_arm64.deb ... 1426s Unpacking dctrl-tools (2.24-3build3) ... 1426s Selecting previously unselected package libgfortran-13-dev:arm64. 1426s Preparing to unpack .../26-libgfortran-13-dev_13.2.0-23ubuntu4_arm64.deb ... 1426s Unpacking libgfortran-13-dev:arm64 (13.2.0-23ubuntu4) ... 1426s Selecting previously unselected package gfortran-13-aarch64-linux-gnu. 1426s Preparing to unpack .../27-gfortran-13-aarch64-linux-gnu_13.2.0-23ubuntu4_arm64.deb ... 1426s Unpacking gfortran-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1426s Selecting previously unselected package gfortran-13. 1427s Preparing to unpack .../28-gfortran-13_13.2.0-23ubuntu4_arm64.deb ... 1427s Unpacking gfortran-13 (13.2.0-23ubuntu4) ... 1427s Selecting previously unselected package gfortran-aarch64-linux-gnu. 1427s Preparing to unpack .../29-gfortran-aarch64-linux-gnu_4%3a13.2.0-7ubuntu1_arm64.deb ... 1427s Unpacking gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1427s Selecting previously unselected package gfortran. 1427s Preparing to unpack .../30-gfortran_4%3a13.2.0-7ubuntu1_arm64.deb ... 1427s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 1427s Selecting previously unselected package icu-devtools. 1427s Preparing to unpack .../31-icu-devtools_74.2-1ubuntu3_arm64.deb ... 1427s Unpacking icu-devtools (74.2-1ubuntu3) ... 1427s Selecting previously unselected package libblas-dev:arm64. 1428s Preparing to unpack .../32-libblas-dev_3.12.0-3build1_arm64.deb ... 1428s Unpacking libblas-dev:arm64 (3.12.0-3build1) ... 1428s Selecting previously unselected package libbz2-dev:arm64. 1428s Preparing to unpack .../33-libbz2-dev_1.0.8-5.1_arm64.deb ... 1428s Unpacking libbz2-dev:arm64 (1.0.8-5.1) ... 1428s Selecting previously unselected package libdeflate-dev:arm64. 1428s Preparing to unpack .../34-libdeflate-dev_1.20-1_arm64.deb ... 1428s Unpacking libdeflate-dev:arm64 (1.20-1) ... 1428s Selecting previously unselected package libicu-dev:arm64. 1428s Preparing to unpack .../35-libicu-dev_74.2-1ubuntu3_arm64.deb ... 1428s Unpacking libicu-dev:arm64 (74.2-1ubuntu3) ... 1429s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 1429s Preparing to unpack .../36-libjpeg-turbo8-dev_2.1.5-2ubuntu2_arm64.deb ... 1429s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu2) ... 1429s Selecting previously unselected package libjpeg8-dev:arm64. 1429s Preparing to unpack .../37-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 1429s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1429s Selecting previously unselected package libjpeg-dev:arm64. 1429s Preparing to unpack .../38-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 1429s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 1429s Selecting previously unselected package liblapack-dev:arm64. 1429s Preparing to unpack .../39-liblapack-dev_3.12.0-3build1_arm64.deb ... 1429s Unpacking liblapack-dev:arm64 (3.12.0-3build1) ... 1430s Selecting previously unselected package libncurses-dev:arm64. 1430s Preparing to unpack .../40-libncurses-dev_6.5-2_arm64.deb ... 1430s Unpacking libncurses-dev:arm64 (6.5-2) ... 1430s Selecting previously unselected package libpcre2-16-0:arm64. 1430s Preparing to unpack .../41-libpcre2-16-0_10.42-4ubuntu2_arm64.deb ... 1430s Unpacking libpcre2-16-0:arm64 (10.42-4ubuntu2) ... 1430s Selecting previously unselected package libpcre2-32-0:arm64. 1430s Preparing to unpack .../42-libpcre2-32-0_10.42-4ubuntu2_arm64.deb ... 1430s Unpacking libpcre2-32-0:arm64 (10.42-4ubuntu2) ... 1430s Selecting previously unselected package libpcre2-posix3:arm64. 1430s Preparing to unpack .../43-libpcre2-posix3_10.42-4ubuntu2_arm64.deb ... 1430s Unpacking libpcre2-posix3:arm64 (10.42-4ubuntu2) ... 1430s Selecting previously unselected package libpcre2-dev:arm64. 1430s Preparing to unpack .../44-libpcre2-dev_10.42-4ubuntu2_arm64.deb ... 1430s Unpacking libpcre2-dev:arm64 (10.42-4ubuntu2) ... 1430s Selecting previously unselected package libpkgconf3:arm64. 1431s Preparing to unpack .../45-libpkgconf3_1.8.1-3_arm64.deb ... 1431s Unpacking libpkgconf3:arm64 (1.8.1-3) ... 1431s Selecting previously unselected package zlib1g-dev:arm64. 1431s Preparing to unpack .../46-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_arm64.deb ... 1431s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3.1ubuntu2) ... 1431s Selecting previously unselected package libpng-dev:arm64. 1431s Preparing to unpack .../47-libpng-dev_1.6.43-5build1_arm64.deb ... 1431s Unpacking libpng-dev:arm64 (1.6.43-5build1) ... 1431s Selecting previously unselected package libreadline-dev:arm64. 1431s Preparing to unpack .../48-libreadline-dev_8.2-4build1_arm64.deb ... 1431s Unpacking libreadline-dev:arm64 (8.2-4build1) ... 1431s Selecting previously unselected package liblzma-dev:arm64. 1431s Preparing to unpack .../49-liblzma-dev_5.6.1+really5.4.5-1_arm64.deb ... 1431s Unpacking liblzma-dev:arm64 (5.6.1+really5.4.5-1) ... 1431s Selecting previously unselected package pkgconf-bin. 1432s Preparing to unpack .../50-pkgconf-bin_1.8.1-3_arm64.deb ... 1432s Unpacking pkgconf-bin (1.8.1-3) ... 1432s Selecting previously unselected package pkgconf:arm64. 1432s Preparing to unpack .../51-pkgconf_1.8.1-3_arm64.deb ... 1432s Unpacking pkgconf:arm64 (1.8.1-3) ... 1432s Selecting previously unselected package libtirpc-dev:arm64. 1432s Preparing to unpack .../52-libtirpc-dev_1.3.4+ds-1.3_arm64.deb ... 1432s Unpacking libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1432s Selecting previously unselected package r-base-dev. 1432s Preparing to unpack .../53-r-base-dev_4.4.1-1_all.deb ... 1432s Unpacking r-base-dev (4.4.1-1) ... 1432s Selecting previously unselected package pkg-r-autopkgtest. 1432s Preparing to unpack .../54-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1432s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1432s Selecting previously unselected package autopkgtest-satdep. 1433s Preparing to unpack .../55-2-autopkgtest-satdep.deb ... 1433s Unpacking autopkgtest-satdep (0) ... 1433s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-2ubuntu2) ... 1433s Setting up libncurses-dev:arm64 (6.5-2) ... 1433s Setting up libreadline-dev:arm64 (8.2-4build1) ... 1433s Setting up libpcre2-16-0:arm64 (10.42-4ubuntu2) ... 1433s Setting up libpcre2-32-0:arm64 (10.42-4ubuntu2) ... 1433s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ... 1433s Setting up libpkgconf3:arm64 (1.8.1-3) ... 1433s Setting up libmpc3:arm64 (1.3.1-1build1) ... 1433s Setting up libatomic1:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up icu-devtools (74.2-1ubuntu3) ... 1433s Setting up pkgconf-bin (1.8.1-3) ... 1433s Setting up liblzma-dev:arm64 (5.6.1+really5.4.5-1) ... 1433s Setting up libubsan1:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1ubuntu2) ... 1433s Setting up libpcre2-posix3:arm64 (10.42-4ubuntu2) ... 1433s Setting up libhwasan0:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up libasan8:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up libtsan2:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 1433s Setting up libisl23:arm64 (0.26-3build1) ... 1433s Setting up libdeflate-dev:arm64 (1.20-1) ... 1433s Setting up libicu-dev:arm64 (74.2-1ubuntu3) ... 1433s Setting up libcc1-0:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up liblsan0:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up libblas-dev:arm64 (3.12.0-3build1) ... 1433s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode 1433s Setting up dctrl-tools (2.24-3build3) ... 1433s Setting up libitm1:arm64 (14.1.0-1ubuntu1) ... 1433s Setting up libbz2-dev:arm64 (1.0.8-5.1) ... 1433s Setting up libpcre2-dev:arm64 (10.42-4ubuntu2) ... 1433s Setting up cpp-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1433s Setting up libpng-dev:arm64 (1.6.43-5build1) ... 1433s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 1433s Setting up pkgconf:arm64 (1.8.1-3) ... 1433s Setting up cpp-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1433s Setting up liblapack-dev:arm64 (3.12.0-3build1) ... 1433s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 1433s Setting up libgcc-13-dev:arm64 (13.2.0-23ubuntu4) ... 1433s Setting up libgfortran-13-dev:arm64 (13.2.0-23ubuntu4) ... 1433s Setting up libstdc++-13-dev:arm64 (13.2.0-23ubuntu4) ... 1433s Setting up cpp-13 (13.2.0-23ubuntu4) ... 1433s Setting up gcc-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1433s Setting up gcc-13 (13.2.0-23ubuntu4) ... 1433s Setting up cpp (4:13.2.0-7ubuntu1) ... 1433s Setting up g++-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1433s Setting up gcc-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1433s Setting up g++-13 (13.2.0-23ubuntu4) ... 1433s Setting up gfortran-13-aarch64-linux-gnu (13.2.0-23ubuntu4) ... 1433s Setting up gcc (4:13.2.0-7ubuntu1) ... 1433s Setting up gfortran-13 (13.2.0-23ubuntu4) ... 1433s Setting up g++-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1433s Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7ubuntu1) ... 1433s Setting up gfortran (4:13.2.0-7ubuntu1) ... 1433s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1433s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1433s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1433s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1433s Setting up g++ (4:13.2.0-7ubuntu1) ... 1433s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1433s Setting up build-essential (12.10ubuntu1) ... 1433s Setting up r-base-dev (4.4.1-1) ... 1433s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1433s Setting up autopkgtest-satdep (0) ... 1433s Processing triggers for man-db (2.12.1-2) ... 1436s Processing triggers for install-info (7.1-3build2) ... 1437s Processing triggers for libc-bin (2.39-0ubuntu9) ... 1443s (Reading database ... 91634 files and directories currently installed.) 1443s Removing autopkgtest-satdep (0) ... 1444s autopkgtest [11:22:12]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1444s autopkgtest [11:22:12]: test pkg-r-autopkgtest: [----------------------- 1444s Test: Try to load the R library gbm 1445s 1445s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 1445s Copyright (C) 2024 The R Foundation for Statistical Computing 1445s Platform: aarch64-unknown-linux-gnu 1445s 1445s R is free software and comes with ABSOLUTELY NO WARRANTY. 1445s You are welcome to redistribute it under certain conditions. 1445s Type 'license()' or 'licence()' for distribution details. 1445s 1445s R is a collaborative project with many contributors. 1445s Type 'contributors()' for more information and 1445s 'citation()' on how to cite R or R packages in publications. 1445s 1445s Type 'demo()' for some demos, 'help()' for on-line help, or 1445s 'help.start()' for an HTML browser interface to help. 1445s Type 'q()' to quit R. 1445s 1445s > library('gbm') 1446s Loaded gbm 2.1.9 1446s This version of gbm is no longer under development. Consider transitioning to gbm3, https://github.com/gbm-developers/gbm3 1446s > 1446s > 1446s Other tests are currently unsupported! 1446s They will be progressively added. 1446s autopkgtest [11:22:14]: test pkg-r-autopkgtest: -----------------------] 1447s pkg-r-autopkgtest PASS 1447s autopkgtest [11:22:15]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1447s autopkgtest [11:22:15]: @@@@@@@@@@@@@@@@@@@@ summary 1447s run-unit-test FAIL non-zero exit status 1 1447s pkg-r-autopkgtest PASS 1472s nova [W] Skipping flock in bos03-arm64 1472s Creating nova instance adt-oracular-arm64-r-cran-gbm-20240616-102301-juju-7f2275-prod-proposed-migration-environment-2-c315ea8a-655b-4f4d-b6a6-ea10552f1659 from image adt/ubuntu-oracular-arm64-server-20240615.img (UUID 891f4ace-6bc2-49e5-8107-dfb2761629d0)...