0s autopkgtest [16:08:09]: starting date and time: 2024-07-26 16:08:09+0000 0s autopkgtest [16:08:09]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [16:08:09]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.b_4tnx7g/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-igraph --apt-upgrade r-cran-tidygraph --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-igraph/2.0.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-2.secgroup --name adt-oracular-amd64-r-cran-tidygraph-20240726-160809-juju-7f2275-prod-proposed-migration-environment-3-6bf66565-3fcb-490b-ae50-fee5a6c8e674 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 73s autopkgtest [16:09:22]: testbed dpkg architecture: amd64 73s autopkgtest [16:09:22]: testbed apt version: 2.9.6 73s autopkgtest [16:09:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup 73s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 73s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [436 kB] 74s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 74s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4288 B] 74s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [50.6 kB] 74s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [53.4 kB] 74s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [94.8 kB] 74s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [2116 B] 74s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [6244 B] 74s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [34.9 kB] 74s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B] 74s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [498 kB] 74s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [296 kB] 74s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [9900 B] 74s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [8792 B] 74s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3052 B] 74s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [276 B] 75s Fetched 1634 kB in 0s (4201 kB/s) 75s Reading package lists... 76s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Calculating upgrade... 77s The following packages will be upgraded: 77s bpfcc-tools bpftrace libbpfcc liblz4-1 mawk python3-bpfcc 77s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 77s Need to get 13.9 MB of archives. 77s After this operation, 37.8 MB of additional disk space will be used. 77s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 liblz4-1 amd64 1.9.4-3 [63.1 kB] 77s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 mawk amd64 1.3.4.20240622-2 [127 kB] 77s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libbpfcc amd64 0.30.0+ds-1ubuntu2 [644 kB] 77s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-bpfcc all 0.30.0+ds-1ubuntu2 [40.3 kB] 77s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 bpfcc-tools all 0.30.0+ds-1ubuntu2 [697 kB] 78s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 bpftrace amd64 0.21.0-1ubuntu6 [12.3 MB] 78s Fetched 13.9 MB in 0s (61.0 MB/s) 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 78s Preparing to unpack .../liblz4-1_1.9.4-3_amd64.deb ... 78s Unpacking liblz4-1:amd64 (1.9.4-3) over (1.9.4-2) ... 78s Setting up liblz4-1:amd64 (1.9.4-3) ... 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 78s Preparing to unpack .../mawk_1.3.4.20240622-2_amd64.deb ... 78s Unpacking mawk (1.3.4.20240622-2) over (1.3.4.20240622-1) ... 78s Preparing to unpack .../libbpfcc_0.30.0+ds-1ubuntu2_amd64.deb ... 78s Unpacking libbpfcc:amd64 (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 78s Preparing to unpack .../python3-bpfcc_0.30.0+ds-1ubuntu2_all.deb ... 79s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 79s Preparing to unpack .../bpfcc-tools_0.30.0+ds-1ubuntu2_all.deb ... 79s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 79s Preparing to unpack .../bpftrace_0.21.0-1ubuntu6_amd64.deb ... 79s Unpacking bpftrace (0.21.0-1ubuntu6) over (0.20.2-1ubuntu4) ... 79s Setting up mawk (1.3.4.20240622-2) ... 79s Setting up libbpfcc:amd64 (0.30.0+ds-1ubuntu2) ... 79s Setting up python3-bpfcc (0.30.0+ds-1ubuntu2) ... 79s Setting up bpftrace (0.21.0-1ubuntu6) ... 79s Setting up bpfcc-tools (0.30.0+ds-1ubuntu2) ... 79s Processing triggers for man-db (2.12.1-2) ... 80s Processing triggers for libc-bin (2.39-0ubuntu9) ... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 82s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 82s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 82s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 83s Reading package lists... 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 84s Calculating upgrade... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s autopkgtest [16:09:35]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 86s autopkgtest [16:09:35]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-tidygraph 87s Get:1 http://ftpmaster.internal/ubuntu oracular/universe r-cran-tidygraph 1.3.0-1 (dsc) [2369 B] 87s Get:2 http://ftpmaster.internal/ubuntu oracular/universe r-cran-tidygraph 1.3.0-1 (tar) [133 kB] 87s Get:3 http://ftpmaster.internal/ubuntu oracular/universe r-cran-tidygraph 1.3.0-1 (diff) [2876 B] 87s gpgv: Signature made Tue Jan 9 08:45:37 2024 UTC 87s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 87s gpgv: issuer "tille@debian.org" 87s gpgv: Can't check signature: No public key 87s dpkg-source: warning: cannot verify inline signature for ./r-cran-tidygraph_1.3.0-1.dsc: no acceptable signature found 87s autopkgtest [16:09:36]: testing package r-cran-tidygraph version 1.3.0-1 88s autopkgtest [16:09:37]: build not needed 89s autopkgtest [16:09:38]: test run-unit-test: preparing testbed 89s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Starting pkgProblemResolver with broken count: 0 90s Starting 2 pkgProblemResolver with broken count: 0 90s Done 90s The following additional packages will be installed: 90s fontconfig fonts-glyphicons-halflings libamd3 libblas3 libcairo2 libcolamd3 90s libdatrie1 libgfortran5 libglpk40 libice6 libjs-bootstrap liblapack3 90s libltdl7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 90s libpaper1 libpixman-1-0 libsm6 libsuitesparseconfig7 libtcl8.6 libthai-data 90s libthai0 libtk8.6 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 90s libxt6t64 littler node-html5shiv r-base-core r-bioc-biocgenerics 90s r-bioc-graph r-cran-ape r-cran-askpass r-cran-brio r-cran-ca r-cran-callr 90s r-cran-cli r-cran-cluster r-cran-coda r-cran-codetools r-cran-colorspace 90s r-cran-covr r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-desc 90s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi 90s r-cran-foreach r-cran-fs r-cran-gclus r-cran-generics r-cran-glue 90s r-cran-httr r-cran-igraph r-cran-iterators r-cran-jsonlite r-cran-lattice 90s r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass 90s r-cran-matrix r-cran-mgcv r-cran-mime r-cran-network r-cran-nlme 90s r-cran-openssl r-cran-permute r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 90s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps 90s r-cran-purrr r-cran-qap r-cran-r6 r-cran-rcpp r-cran-registry 90s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-seriation 90s r-cran-statnet.common r-cran-stringi r-cran-stringr r-cran-sys 90s r-cran-testthat r-cran-tibble r-cran-tidygraph r-cran-tidyr 90s r-cran-tidyselect r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 90s r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 90s Suggested packages: 90s libiodbc2-dev default-libmysqlclient-dev tcl8.6 tk8.6 nodejs elpa-ess 90s r-doc-info | r-doc-pdf r-mathlib r-base-html r-bioc-biobase r-bioc-s4vectors 90s r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings 90s r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 90s r-bioc-annotate r-cran-runit r-cran-sparsem r-cran-xml r-bioc-rbgl 90s r-bioc-biocstyle r-cran-knitr r-cran-gee r-cran-expm clustalw muscle phyml 90s t-coffee r-cran-rgl r-cran-vcd r-cran-kernsmooth r-cran-kernlab 90s r-cran-mvtnorm r-cran-shiny r-cran-shinyjs r-cran-ggplot2 r-cran-scales 90s r-cran-png r-cran-jpeg r-cran-rmarkdown r-cran-rcolorbrewer r-cran-viridis 90s r-cran-rstudioapi r-cran-getopt r-cran-bookdown r-cran-sessioninfo 90s r-cran-bit64 r-cran-dbi r-cran-formattable r-cran-nanotime 90s r-cran-palmerpenguins r-cran-survival r-cran-units r-cran-vdiffr 90s r-cran-inline r-cran-hmisc r-cran-roxygen2 r-cran-rvest r-cran-spelling 90s r-cran-bench r-cran-blob r-cran-here r-cran-hms r-cran-htmltools r-cran-maps 90s r-cran-doparallel 90s Recommended packages: 90s r-recommended r-base-dev r-doc-html r-cran-phangorn r-cran-mockery 90s r-cran-spelling r-cran-htmltools r-cran-htmlwidgets r-cran-knitr 90s r-cran-rmarkdown r-cran-rstudioapi r-cran-whoami r-cran-dt r-cran-xml2 90s r-cran-memoise r-cran-bench r-cran-decor r-cran-ggplot2 r-cran-lobstr 90s r-cran-progress r-cran-scales r-cran-later r-cran-httpuv r-cran-webutils 90s r-cran-gh r-cran-broom r-cran-dbi r-cran-dbplyr r-cran-rmysql 90s r-cran-rpostgresql r-cran-rsqlite r-cran-unitizer r-cran-jpeg r-cran-png 90s r-cran-readr r-cran-rgl r-cran-vdiffr r-cran-r.rsp r-cran-sf r-cran-lintr 90s r-cran-tidyverse r-cran-sna r-cran-sodium r-cran-lubridate r-cran-bitops 90s r-cran-mathjaxr r-cran-remotes r-cran-usethis r-cran-webfakes r-cran-pingr 90s r-cran-mockr r-cran-dbscan r-cran-dendextend r-cran-doparallel r-cran-rtsne 90s r-cran-shiny r-cran-data.table r-cran-formattable r-cran-bit64 90s r-cran-pkgdown r-cran-zeallot r-cran-markdown r-cran-runit 90s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 90s x11-xserver-utils 91s The following NEW packages will be installed: 91s autopkgtest-satdep fontconfig fonts-glyphicons-halflings libamd3 libblas3 91s libcairo2 libcolamd3 libdatrie1 libgfortran5 libglpk40 libice6 91s libjs-bootstrap liblapack3 libltdl7 libpango-1.0-0 libpangocairo-1.0-0 91s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libsm6 91s libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 libtk8.6 91s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 91s node-html5shiv r-base-core r-bioc-biocgenerics r-bioc-graph r-cran-ape 91s r-cran-askpass r-cran-brio r-cran-ca r-cran-callr r-cran-cli r-cran-cluster 91s r-cran-coda r-cran-codetools r-cran-colorspace r-cran-covr r-cran-cpp11 91s r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest 91s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-foreach r-cran-fs 91s r-cran-gclus r-cran-generics r-cran-glue r-cran-httr r-cran-igraph 91s r-cran-iterators r-cran-jsonlite r-cran-lattice r-cran-lazyeval 91s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 91s r-cran-mgcv r-cran-mime r-cran-network r-cran-nlme r-cran-openssl 91s r-cran-permute r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 91s r-cran-pkgkitten r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps 91s r-cran-purrr r-cran-qap r-cran-r6 r-cran-rcpp r-cran-registry 91s r-cran-rematch2 r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-seriation 91s r-cran-statnet.common r-cran-stringi r-cran-stringr r-cran-sys 91s r-cran-testthat r-cran-tibble r-cran-tidygraph r-cran-tidyr 91s r-cran-tidyselect r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 91s r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 91s 0 upgraded, 117 newly installed, 0 to remove and 0 not upgraded. 91s Need to get 92.2 MB/92.2 MB of archives. 91s After this operation, 173 MB of additional disk space will be used. 91s Get:1 /tmp/autopkgtest.2xUT5b/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [756 B] 91s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 91s Get:3 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 91s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libsuitesparseconfig7 amd64 1:7.7.0+dfsg-5 [13.0 kB] 91s Get:5 http://ftpmaster.internal/ubuntu oracular/universe amd64 libamd3 amd64 1:7.7.0+dfsg-5 [27.2 kB] 91s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 91s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 91s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 91s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 91s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 91s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo2 amd64 1.18.0-3build1 [566 kB] 91s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libcolamd3 amd64 1:7.7.0+dfsg-5 [19.4 kB] 91s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 91s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-5ubuntu1 [909 kB] 91s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 91s Get:16 http://ftpmaster.internal/ubuntu oracular/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 91s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 91s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB] 91s Get:19 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 91s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 91s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 91s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 91s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [233 kB] 91s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [42.3 kB] 91s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [28.7 kB] 91s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 91s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 91s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB] 91s Get:29 http://ftpmaster.internal/ubuntu oracular/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 91s Get:30 http://ftpmaster.internal/ubuntu oracular/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 91s Get:31 http://ftpmaster.internal/ubuntu oracular/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 91s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 91s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 91s Get:34 http://ftpmaster.internal/ubuntu oracular/main amd64 zip amd64 3.0-13build1 [175 kB] 91s Get:35 http://ftpmaster.internal/ubuntu oracular/main amd64 unzip amd64 6.0-28ubuntu5 [180 kB] 91s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 91s Get:37 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-base-core amd64 4.4.1-1 [28.5 MB] 91s Get:38 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 91s Get:39 http://ftpmaster.internal/ubuntu oracular/universe amd64 littler all 0.3.20-1 [2486 B] 91s Get:40 http://ftpmaster.internal/ubuntu oracular/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 91s Get:41 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 91s Get:42 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-bioc-graph amd64 1.80.0-1 [1289 kB] 91s Get:43 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 91s Get:44 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-nlme amd64 3.1.165-1 [2309 kB] 91s Get:45 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 91s Get:46 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 91s Get:47 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-digest amd64 0.6.36-1 [199 kB] 91s Get:48 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 91s Get:49 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 91s Get:50 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 91s Get:51 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 91s Get:52 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ca all 0.71.1-2build1 [243 kB] 91s Get:53 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 91s Get:54 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 91s Get:55 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 91s Get:56 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 91s Get:57 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 91s Get:58 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cluster amd64 2.1.6-1build1 [553 kB] 91s Get:59 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-coda all 0.19-4.1-1 [321 kB] 91s Get:60 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 91s Get:61 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 91s Get:62 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 91s Get:63 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 91s Get:64 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rex all 1.2.1-1 [129 kB] 91s Get:65 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 91s Get:66 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 91s Get:67 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2build2 [402 kB] 91s Get:68 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 91s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 91s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 91s Get:71 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 91s Get:72 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 91s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 91s Get:74 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 91s Get:75 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 91s Get:76 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 91s Get:77 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 91s Get:78 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 91s Get:79 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 91s Get:80 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 91s Get:81 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 91s Get:82 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 91s Get:83 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 91s Get:84 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 91s Get:85 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 91s Get:86 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 91s Get:87 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 91s Get:88 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 91s Get:89 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 91s Get:90 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 91s Get:91 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 91s Get:92 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 91s Get:93 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-gclus all 1.3.2-2build1 [406 kB] 91s Get:94 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-matrix amd64 1.7-0-3 [4185 kB] 91s Get:95 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 91s Get:96 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 91s Get:97 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 91s Get:98 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-statnet.common amd64 4.9.0-1 [259 kB] 91s Get:99 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-network amd64 1.18.2-1 [817 kB] 91s Get:100 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 91s Get:101 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 91s Get:102 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 91s Get:103 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 91s Get:104 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 91s Get:105 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 91s Get:106 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB] 92s Get:107 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-registry all 0.5-1-2build1 [202 kB] 92s Get:108 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 92s Get:109 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB] 92s Get:110 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-vegan amd64 2.6-6.1+dfsg-1 [3123 kB] 92s Get:111 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-seriation amd64 1.5.5-1 [1325 kB] 92s Get:112 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 92s Get:113 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 92s Get:114 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 92s Get:115 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 92s Get:116 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 92s Get:117 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidygraph amd64 1.3.0-1 [544 kB] 92s Preconfiguring packages ... 92s Fetched 92.2 MB in 1s (86.6 MB/s) 92s Selecting previously unselected package fontconfig. 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74530 files and directories currently installed.) 92s Preparing to unpack .../000-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 92s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 92s Selecting previously unselected package fonts-glyphicons-halflings. 92s Preparing to unpack .../001-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 92s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 92s Selecting previously unselected package libsuitesparseconfig7:amd64. 92s Preparing to unpack .../002-libsuitesparseconfig7_1%3a7.7.0+dfsg-5_amd64.deb ... 92s Unpacking libsuitesparseconfig7:amd64 (1:7.7.0+dfsg-5) ... 92s Selecting previously unselected package libamd3:amd64. 92s Preparing to unpack .../003-libamd3_1%3a7.7.0+dfsg-5_amd64.deb ... 92s Unpacking libamd3:amd64 (1:7.7.0+dfsg-5) ... 93s Selecting previously unselected package libblas3:amd64. 93s Preparing to unpack .../004-libblas3_3.12.0-3build1_amd64.deb ... 93s Unpacking libblas3:amd64 (3.12.0-3build1) ... 93s Selecting previously unselected package libpixman-1-0:amd64. 93s Preparing to unpack .../005-libpixman-1-0_0.42.2-1build1_amd64.deb ... 93s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 93s Selecting previously unselected package libxcb-render0:amd64. 93s Preparing to unpack .../006-libxcb-render0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxcb-shm0:amd64. 93s Preparing to unpack .../007-libxcb-shm0_1.17.0-2_amd64.deb ... 93s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 93s Selecting previously unselected package libxrender1:amd64. 93s Preparing to unpack .../008-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 93s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 93s Selecting previously unselected package libcairo2:amd64. 93s Preparing to unpack .../009-libcairo2_1.18.0-3build1_amd64.deb ... 93s Unpacking libcairo2:amd64 (1.18.0-3build1) ... 93s Selecting previously unselected package libcolamd3:amd64. 93s Preparing to unpack .../010-libcolamd3_1%3a7.7.0+dfsg-5_amd64.deb ... 93s Unpacking libcolamd3:amd64 (1:7.7.0+dfsg-5) ... 93s Selecting previously unselected package libdatrie1:amd64. 93s Preparing to unpack .../011-libdatrie1_0.2.13-3build1_amd64.deb ... 93s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 93s Selecting previously unselected package libgfortran5:amd64. 93s Preparing to unpack .../012-libgfortran5_14.1.0-5ubuntu1_amd64.deb ... 93s Unpacking libgfortran5:amd64 (14.1.0-5ubuntu1) ... 93s Selecting previously unselected package libltdl7:amd64. 93s Preparing to unpack .../013-libltdl7_2.4.7-7build1_amd64.deb ... 93s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 93s Selecting previously unselected package libglpk40:amd64. 93s Preparing to unpack .../014-libglpk40_5.0-1build2_amd64.deb ... 93s Unpacking libglpk40:amd64 (5.0-1build2) ... 93s Selecting previously unselected package x11-common. 93s Preparing to unpack .../015-x11-common_1%3a7.7+23ubuntu3_all.deb ... 93s Unpacking x11-common (1:7.7+23ubuntu3) ... 93s Selecting previously unselected package libice6:amd64. 93s Preparing to unpack .../016-libice6_2%3a1.0.10-1build3_amd64.deb ... 93s Unpacking libice6:amd64 (2:1.0.10-1build3) ... 93s Selecting previously unselected package libjs-bootstrap. 93s Preparing to unpack .../017-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 93s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 93s Selecting previously unselected package liblapack3:amd64. 93s Preparing to unpack .../018-liblapack3_3.12.0-3build1_amd64.deb ... 93s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 93s Selecting previously unselected package libthai-data. 93s Preparing to unpack .../019-libthai-data_0.1.29-2build1_all.deb ... 93s Unpacking libthai-data (0.1.29-2build1) ... 93s Selecting previously unselected package libthai0:amd64. 93s Preparing to unpack .../020-libthai0_0.1.29-2build1_amd64.deb ... 93s Unpacking libthai0:amd64 (0.1.29-2build1) ... 93s Selecting previously unselected package libpango-1.0-0:amd64. 93s Preparing to unpack .../021-libpango-1.0-0_1.54.0+ds-1_amd64.deb ... 93s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-1) ... 93s Selecting previously unselected package libpangoft2-1.0-0:amd64. 93s Preparing to unpack .../022-libpangoft2-1.0-0_1.54.0+ds-1_amd64.deb ... 93s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 93s Selecting previously unselected package libpangocairo-1.0-0:amd64. 93s Preparing to unpack .../023-libpangocairo-1.0-0_1.54.0+ds-1_amd64.deb ... 93s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 93s Selecting previously unselected package libpaper1:amd64. 93s Preparing to unpack .../024-libpaper1_1.1.29build1_amd64.deb ... 93s Unpacking libpaper1:amd64 (1.1.29build1) ... 93s Selecting previously unselected package libpaper-utils. 93s Preparing to unpack .../025-libpaper-utils_1.1.29build1_amd64.deb ... 93s Unpacking libpaper-utils (1.1.29build1) ... 93s Selecting previously unselected package libsm6:amd64. 93s Preparing to unpack .../026-libsm6_2%3a1.2.3-1build3_amd64.deb ... 93s Unpacking libsm6:amd64 (2:1.2.3-1build3) ... 93s Selecting previously unselected package libtcl8.6:amd64. 93s Preparing to unpack .../027-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 93s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 93s Selecting previously unselected package libxft2:amd64. 93s Preparing to unpack .../028-libxft2_2.3.6-1build1_amd64.deb ... 93s Unpacking libxft2:amd64 (2.3.6-1build1) ... 93s Selecting previously unselected package libxss1:amd64. 93s Preparing to unpack .../029-libxss1_1%3a1.2.3-1build3_amd64.deb ... 93s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 93s Selecting previously unselected package libtk8.6:amd64. 93s Preparing to unpack .../030-libtk8.6_8.6.14-1build1_amd64.deb ... 93s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 94s Selecting previously unselected package libxt6t64:amd64. 94s Preparing to unpack .../031-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 94s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 94s Selecting previously unselected package zip. 94s Preparing to unpack .../032-zip_3.0-13build1_amd64.deb ... 94s Unpacking zip (3.0-13build1) ... 94s Selecting previously unselected package unzip. 94s Preparing to unpack .../033-unzip_6.0-28ubuntu5_amd64.deb ... 94s Unpacking unzip (6.0-28ubuntu5) ... 94s Selecting previously unselected package xdg-utils. 94s Preparing to unpack .../034-xdg-utils_1.2.1-0ubuntu1_all.deb ... 94s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 94s Selecting previously unselected package r-base-core. 94s Preparing to unpack .../035-r-base-core_4.4.1-1_amd64.deb ... 94s Unpacking r-base-core (4.4.1-1) ... 94s Selecting previously unselected package r-cran-littler. 94s Preparing to unpack .../036-r-cran-littler_0.3.20-1_amd64.deb ... 94s Unpacking r-cran-littler (0.3.20-1) ... 94s Selecting previously unselected package littler. 94s Preparing to unpack .../037-littler_0.3.20-1_all.deb ... 94s Unpacking littler (0.3.20-1) ... 94s Selecting previously unselected package node-html5shiv. 94s Preparing to unpack .../038-node-html5shiv_3.7.3+dfsg-5_all.deb ... 94s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 94s Selecting previously unselected package r-bioc-biocgenerics. 94s Preparing to unpack .../039-r-bioc-biocgenerics_0.48.1-2_all.deb ... 94s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 94s Selecting previously unselected package r-bioc-graph. 94s Preparing to unpack .../040-r-bioc-graph_1.80.0-1_amd64.deb ... 94s Unpacking r-bioc-graph (1.80.0-1) ... 94s Selecting previously unselected package r-cran-lattice. 94s Preparing to unpack .../041-r-cran-lattice_0.22-6-1_amd64.deb ... 94s Unpacking r-cran-lattice (0.22-6-1) ... 94s Selecting previously unselected package r-cran-nlme. 94s Preparing to unpack .../042-r-cran-nlme_3.1.165-1_amd64.deb ... 94s Unpacking r-cran-nlme (3.1.165-1) ... 94s Selecting previously unselected package r-cran-pkgkitten. 94s Preparing to unpack .../043-r-cran-pkgkitten_0.2.3-1_all.deb ... 94s Unpacking r-cran-pkgkitten (0.2.3-1) ... 94s Selecting previously unselected package r-cran-rcpp. 94s Preparing to unpack .../044-r-cran-rcpp_1.0.12-1_amd64.deb ... 94s Unpacking r-cran-rcpp (1.0.12-1) ... 95s Selecting previously unselected package r-cran-digest. 95s Preparing to unpack .../045-r-cran-digest_0.6.36-1_amd64.deb ... 95s Unpacking r-cran-digest (0.6.36-1) ... 95s Selecting previously unselected package r-cran-ape. 95s Preparing to unpack .../046-r-cran-ape_5.8-1_amd64.deb ... 95s Unpacking r-cran-ape (5.8-1) ... 95s Selecting previously unselected package r-cran-sys. 95s Preparing to unpack .../047-r-cran-sys_3.4.2-1_amd64.deb ... 95s Unpacking r-cran-sys (3.4.2-1) ... 95s Selecting previously unselected package r-cran-askpass. 95s Preparing to unpack .../048-r-cran-askpass_1.2.0-1_amd64.deb ... 95s Unpacking r-cran-askpass (1.2.0-1) ... 95s Selecting previously unselected package r-cran-brio. 95s Preparing to unpack .../049-r-cran-brio_1.1.5-1_amd64.deb ... 95s Unpacking r-cran-brio (1.1.5-1) ... 95s Selecting previously unselected package r-cran-ca. 95s Preparing to unpack .../050-r-cran-ca_0.71.1-2build1_all.deb ... 95s Unpacking r-cran-ca (0.71.1-2build1) ... 95s Selecting previously unselected package r-cran-ps. 95s Preparing to unpack .../051-r-cran-ps_1.7.6-1_amd64.deb ... 95s Unpacking r-cran-ps (1.7.6-1) ... 95s Selecting previously unselected package r-cran-r6. 95s Preparing to unpack .../052-r-cran-r6_2.5.1-1_all.deb ... 95s Unpacking r-cran-r6 (2.5.1-1) ... 95s Selecting previously unselected package r-cran-processx. 95s Preparing to unpack .../053-r-cran-processx_3.8.4-1_amd64.deb ... 95s Unpacking r-cran-processx (3.8.4-1) ... 95s Selecting previously unselected package r-cran-callr. 95s Preparing to unpack .../054-r-cran-callr_3.7.6-1_all.deb ... 95s Unpacking r-cran-callr (3.7.6-1) ... 95s Selecting previously unselected package r-cran-cli. 95s Preparing to unpack .../055-r-cran-cli_3.6.2-1_amd64.deb ... 95s Unpacking r-cran-cli (3.6.2-1) ... 95s Selecting previously unselected package r-cran-cluster. 95s Preparing to unpack .../056-r-cran-cluster_2.1.6-1build1_amd64.deb ... 95s Unpacking r-cran-cluster (2.1.6-1build1) ... 95s Selecting previously unselected package r-cran-coda. 95s Preparing to unpack .../057-r-cran-coda_0.19-4.1-1_all.deb ... 95s Unpacking r-cran-coda (0.19-4.1-1) ... 95s Selecting previously unselected package r-cran-codetools. 95s 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up r-cran-stringi (1.8.3-1) ... 101s Setting up r-cran-rex (1.2.1-1) ... 101s Setting up r-cran-cpp11 (0.4.7-1) ... 101s Setting up r-cran-matrix (1.7-0-3) ... 101s Setting up r-cran-mgcv (1.9-1-1) ... 101s Setting up r-cran-tsp (1.2-4-1) ... 101s Setting up r-cran-statnet.common (4.9.0-1) ... 101s Setting up r-cran-vctrs (0.6.5-1) ... 101s Setting up r-bioc-graph (1.80.0-1) ... 101s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 101s Setting up r-cran-openssl (2.1.1+dfsg-2build2) ... 101s Setting up r-cran-stringr (1.5.1-1) ... 101s Setting up r-cran-callr (3.7.6-1) ... 101s Setting up r-cran-desc (1.4.3-1) ... 101s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 101s Setting up r-cran-igraph (2.0.3-1) ... 101s Setting up r-cran-network (1.18.2-1) ... 101s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 101s Setting up r-cran-httr (1.4.7+dfsg-1) ... 101s Setting up r-cran-covr (3.6.4+dfsg-1) ... 101s Setting up r-cran-purrr (1.0.2-1) ... 101s Setting up r-cran-vegan (2.6-6.1+dfsg-1) ... 101s Setting up r-cran-pkgbuild (1.4.4-1) ... 101s Setting up r-cran-seriation (1.5.5-1) ... 101s Setting up r-cran-dplyr (1.1.4-1) ... 101s Setting up r-cran-pkgload (1.4.0-1) ... 101s Setting up r-cran-rematch2 (2.1.2-2build1) ... 101s Setting up r-cran-waldo (0.5.2-1build1) ... 101s Setting up r-cran-tidyr (1.3.1-1) ... 101s Setting up r-cran-tidygraph (1.3.0-1) ... 101s Setting up r-cran-testthat (3.2.1.1-1) ... 101s Setting up autopkgtest-satdep (0) ... 101s Processing triggers for man-db (2.12.1-2) ... 102s Processing triggers for install-info (7.1-3build2) ... 102s Processing triggers for libc-bin (2.39-0ubuntu9) ... 107s (Reading database ... 85019 files and directories currently installed.) 107s Removing autopkgtest-satdep (0) ... 108s autopkgtest [16:09:57]: test run-unit-test: [----------------------- 108s BEGIN TEST testthat.R 108s 108s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 108s Copyright (C) 2024 The R Foundation for Statistical Computing 108s Platform: x86_64-pc-linux-gnu 108s 108s R is free software and comes with ABSOLUTELY NO WARRANTY. 108s You are welcome to redistribute it under certain conditions. 108s Type 'license()' or 'licence()' for distribution details. 108s 108s R is a collaborative project with many contributors. 108s Type 'contributors()' for more information and 108s 'citation()' on how to cite R or R packages in publications. 108s 108s Type 'demo()' for some demos, 'help()' for on-line help, or 108s 'help.start()' for an HTML browser interface to help. 108s Type 'q()' to quit R. 108s 108s > # This file is part of the standard setup for testthat. 108s > # It is recommended that you do not modify it. 108s > # 108s > # Where should you do additional test configuration? 108s > # Learn more about the roles of various files in: 108s > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview 108s > # * https://testthat.r-lib.org/articles/special-files.html 108s > 108s > library(testthat) 108s > library(tidygraph) 109s > 109s > test_check("tidygraph") 109s 109s Attaching package: ‘tidygraph’ 109s 109s The following object is masked from ‘package:testthat’: 109s 109s matches 109s 109s The following object is masked from ‘package:stats’: 109s 109s filter 109s 109s Ungrouping `.data`... 109s Splitting by nodes 112s `focus()` selected all nodes. Returning unfocused graph 112s `focus()` didn't select any nodes. Returning unfocused graph 112s Unfocusing graph... 112s Unfocusing prior to grouping 112s Unfocusing prior to morphing 112s Unfocusing graph... 112s Joining with `by = join_by(from, to)` 112s Joining with `by = join_by(from, to)` 112s Joining with `by = join_by(from, to)` 112s Joining with `by = join_by(from, to)` 112s Joining with `by = join_by(from, to)` 112s Joining with `by = join_by(from, to)` 112s Ungrouping `.data`... 114s Subsetting by nodes 114s Splitting by nodes 115s Unfocusing prior to morphing 118s [ FAIL 2 | WARN 21 | SKIP 0 | PASS 430 ] 118s 118s ══ Failed tests ════════════════════════════════════════════════════════════════ 118s ── Error ('test-centrality.R:45:3'): centrality returns correct length for focus ── 118s 118s Error in `mutate(d_tmp, ...)`: i In argument: `cent = fn`. 118s Caused by error: 118s ! `cent` must be size 2 or 1, not 4. 118s Backtrace: 118s ▆ 118s 1. ├─testthat::expect_length(get_cent(gr1, centrality_degree()), 2) at test-centrality.R:45:3 118s 2. │ └─testthat::quasi_label(enquo(object), arg = "object") 118s 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 118s 4. ├─tidygraph (local) get_cent(gr1, centrality_degree()) 118s 5. │ └─gr %>% mutate(cent = fn) %>% pull(cent) at test-centrality.R:2:3 118s 6. ├─dplyr::pull(., cent) 118s 7. ├─dplyr::mutate(., cent = fn) 118s 8. ├─tidygraph:::mutate.tbl_graph(., cent = fn) 118s 9. │ └─tidygraph::mutate_as_tbl(.data, !!!dot) 118s 10. │ ├─dplyr::mutate(d_tmp, ...) 118s 11. │ └─dplyr:::mutate.data.frame(d_tmp, ...) 118s 12. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 118s 13. │ ├─base::withCallingHandlers(...) 118s 14. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 118s 15. │ └─mask$eval_all_mutate(quo) 118s 16. │ └─dplyr (local) eval() 118s 17. ├─dplyr:::dplyr_internal_error(...) 118s 18. │ └─rlang::abort(class = c(class, "dplyr:::internal_error"), dplyr_error_data = data) 118s 19. │ └─rlang:::signal_abort(cnd, .file) 118s 20. │ └─base::signalCondition(cnd) 118s 21. └─dplyr (local) ``(``) 118s 22. └─rlang::abort(message, class = error_class, parent = parent, call = error_call) 118s ── Error ('test-random-walk.R:3:3'): random_walk_rank returns correct data ───── 118s 118s Error in `mutate(d_tmp, ...)`: i In argument: `walk_rank = random_walk_rank(30, 5)`. 118s Caused by error in `random_walk_impl()`: 118s ! At vendor/cigraph/src/paths/random_walk.c:326 : Invalid weight vector length. Invalid value 118s Backtrace: 118s ▆ 118s 1. ├─dplyr::pull(...) at test-random-walk.R:3:3 118s 2. ├─dplyr::mutate(...) 118s 3. ├─tidygraph:::mutate.tbl_graph(...) 118s 4. │ └─tidygraph::mutate_as_tbl(.data, !!!dot) 118s 5. │ ├─dplyr::mutate(d_tmp, ...) 118s 6. │ └─dplyr:::mutate.data.frame(d_tmp, ...) 118s 7. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by) 118s 8. │ ├─base::withCallingHandlers(...) 118s 9. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns) 118s 10. │ └─mask$eval_all_mutate(quo) 118s 11. │ └─dplyr (local) eval() 118s 12. ├─tidygraph::random_walk_rank(30, 5) 118s 13. │ └─igraph::random_walk(graph, root, n, mode) 118s 14. │ └─igraph:::random_walk_impl(...) 118s 15. └─base::.handleSimpleError(...) 118s 16. └─dplyr (local) h(simpleError(msg, call)) 118s 17. └─rlang::abort(message, class = error_class, parent = parent, call = error_call) 118s 118s [ FAIL 2 | WARN 21 | SKIP 0 | PASS 430 ] 118s Error: Test failures 118s Execution halted 118s autopkgtest [16:10:07]: test run-unit-test: -----------------------] 119s autopkgtest [16:10:08]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 119s run-unit-test FAIL non-zero exit status 1 119s autopkgtest [16:10:08]: test pkg-r-autopkgtest: preparing testbed 187s autopkgtest [16:11:16]: testbed dpkg architecture: amd64 187s autopkgtest [16:11:16]: testbed apt version: 2.9.6 187s autopkgtest [16:11:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 187s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 187s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [4288 B] 187s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [436 kB] 187s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [50.6 kB] 187s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 187s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [94.8 kB] 187s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [53.4 kB] 187s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [2116 B] 187s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [6244 B] 187s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [34.9 kB] 187s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B] 187s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [296 kB] 187s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [498 kB] 187s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [9900 B] 187s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [8792 B] 187s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3052 B] 187s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [276 B] 189s Fetched 1634 kB in 0s (5186 kB/s) 189s Reading package lists... 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 191s Calculating upgrade... 191s The following packages will be upgraded: 191s bpfcc-tools bpftrace libbpfcc liblz4-1 mawk python3-bpfcc 191s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 191s Need to get 13.9 MB of archives. 191s After this operation, 37.8 MB of additional disk space will be used. 191s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 liblz4-1 amd64 1.9.4-3 [63.1 kB] 191s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 mawk amd64 1.3.4.20240622-2 [127 kB] 191s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libbpfcc amd64 0.30.0+ds-1ubuntu2 [644 kB] 191s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-bpfcc all 0.30.0+ds-1ubuntu2 [40.3 kB] 191s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 bpfcc-tools all 0.30.0+ds-1ubuntu2 [697 kB] 191s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 bpftrace amd64 0.21.0-1ubuntu6 [12.3 MB] 191s Fetched 13.9 MB in 0s (64.3 MB/s) 192s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 192s Preparing to unpack .../liblz4-1_1.9.4-3_amd64.deb ... 192s Unpacking liblz4-1:amd64 (1.9.4-3) over (1.9.4-2) ... 192s Setting up liblz4-1:amd64 (1.9.4-3) ... 192s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74523 files and directories currently installed.) 192s Preparing to unpack .../mawk_1.3.4.20240622-2_amd64.deb ... 192s Unpacking mawk (1.3.4.20240622-2) over (1.3.4.20240622-1) ... 192s Preparing to unpack .../libbpfcc_0.30.0+ds-1ubuntu2_amd64.deb ... 192s Unpacking libbpfcc:amd64 (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 192s Preparing to unpack .../python3-bpfcc_0.30.0+ds-1ubuntu2_all.deb ... 192s Unpacking python3-bpfcc (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 192s Preparing to unpack .../bpfcc-tools_0.30.0+ds-1ubuntu2_all.deb ... 192s Unpacking bpfcc-tools (0.30.0+ds-1ubuntu2) over (0.29.1+ds-1ubuntu7) ... 192s Preparing to unpack .../bpftrace_0.21.0-1ubuntu6_amd64.deb ... 192s Unpacking bpftrace (0.21.0-1ubuntu6) over (0.20.2-1ubuntu4) ... 192s Setting up mawk (1.3.4.20240622-2) ... 192s Setting up libbpfcc:amd64 (0.30.0+ds-1ubuntu2) ... 192s Setting up python3-bpfcc (0.30.0+ds-1ubuntu2) ... 193s Setting up bpftrace (0.21.0-1ubuntu6) ... 193s Setting up bpfcc-tools (0.30.0+ds-1ubuntu2) ... 193s Processing triggers for man-db (2.12.1-2) ... 194s Processing triggers for libc-bin (2.39-0ubuntu9) ... 194s Reading package lists... 194s Building dependency tree... 194s Reading state information... 194s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 195s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 195s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 195s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 195s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 196s Reading package lists... 196s Reading package lists... 196s Building dependency tree... 196s Reading state information... 196s Calculating upgrade... 197s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 197s Reading package lists... 197s Building dependency tree... 197s Reading state information... 197s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 198s Reading package lists... 198s Building dependency tree... 198s Reading state information... 199s Starting pkgProblemResolver with broken count: 0 199s Starting 2 pkgProblemResolver with broken count: 0 199s Done 199s The following additional packages will be installed: 199s build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu 199s dctrl-tools fontconfig fonts-glyphicons-halflings g++ g++-14 199s g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 199s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 199s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libamd3 199s libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libcairo2 libcc1-0 199s libcolamd3 libdatrie1 libdeflate-dev libgcc-14-dev libgfortran-14-dev 199s libgfortran5 libglpk40 libhwasan0 libice6 libicu-dev libisl23 libitm1 199s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap liblapack-dev 199s liblapack3 liblsan0 libltdl7 liblzma-dev libmpc3 libncurses-dev 199s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 199s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 199s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev libsm6 199s libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 199s libtirpc-dev libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0 libxft2 199s libxrender1 libxss1 libxt6t64 littler node-html5shiv pkg-r-autopkgtest 199s pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-graph 199s r-cran-ape r-cran-askpass r-cran-brio r-cran-ca r-cran-callr r-cran-cli 199s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-covr r-cran-cpp11 199s r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest 199s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-foreach r-cran-fs 199s r-cran-gclus r-cran-generics r-cran-glue r-cran-httr r-cran-igraph 199s r-cran-iterators r-cran-jsonlite r-cran-lattice r-cran-lazyeval 199s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 199s r-cran-mgcv r-cran-mime r-cran-nlme r-cran-openssl r-cran-permute 199s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 199s r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-purrr 199s r-cran-qap r-cran-r6 r-cran-rcpp r-cran-registry r-cran-rematch2 r-cran-rex 199s r-cran-rlang r-cran-rprojroot r-cran-seriation r-cran-stringi r-cran-stringr 199s r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidygraph r-cran-tidyr 199s r-cran-tidyselect r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 199s r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 199s zlib1g-dev 199s Suggested packages: 199s cpp-doc gcc-14-locales cpp-14-doc debtags g++-multilib g++-14-multilib 199s gcc-14-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 199s gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib 199s gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev 199s liblapack-doc libiodbc2-dev default-libmysqlclient-dev icu-doc liblzma-doc 199s ncurses-doc readline-doc libstdc++-14-doc tcl8.6 tk8.6 nodejs elpa-ess 199s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 199s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 199s texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo 199s r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges 199s r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi 199s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-runit r-cran-sparsem 199s r-cran-xml r-bioc-rbgl r-bioc-biocstyle r-cran-knitr r-cran-gee r-cran-expm 199s clustalw muscle phyml t-coffee r-cran-rgl r-cran-vcd r-cran-kernsmooth 199s r-cran-kernlab r-cran-mvtnorm r-cran-shiny r-cran-shinyjs r-cran-ggplot2 199s r-cran-scales r-cran-png r-cran-jpeg r-cran-rmarkdown r-cran-rcolorbrewer 199s r-cran-viridis r-cran-rstudioapi r-cran-getopt r-cran-bookdown 199s r-cran-sessioninfo r-cran-bit64 r-cran-dbi r-cran-formattable 199s r-cran-nanotime r-cran-palmerpenguins r-cran-survival r-cran-units 199s r-cran-vdiffr r-cran-inline r-cran-hmisc r-cran-roxygen2 r-cran-rvest 199s r-cran-spelling r-cran-bench r-cran-blob r-cran-here r-cran-hms 199s r-cran-htmltools r-cran-maps r-cran-doparallel 199s Recommended packages: 199s bzip2-doc libpng-tools r-recommended r-doc-html r-cran-phangorn 199s r-cran-mockery r-cran-spelling r-cran-htmltools r-cran-htmlwidgets 199s r-cran-knitr r-cran-rmarkdown r-cran-rstudioapi r-cran-whoami r-cran-dt 199s r-cran-xml2 r-cran-memoise r-cran-bench r-cran-decor r-cran-ggplot2 199s r-cran-lobstr r-cran-progress r-cran-scales r-cran-later r-cran-httpuv 199s r-cran-webutils r-cran-gh r-cran-broom r-cran-dbi r-cran-dbplyr 199s r-cran-rmysql r-cran-rpostgresql r-cran-rsqlite r-cran-unitizer r-cran-jpeg 199s r-cran-png r-cran-readr r-cran-rgl r-cran-vdiffr r-cran-r.rsp r-cran-sf 199s r-cran-lintr r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-bitops 199s r-cran-mathjaxr r-cran-remotes r-cran-usethis r-cran-webfakes r-cran-pingr 199s r-cran-mockr r-cran-dbscan r-cran-dendextend r-cran-doparallel r-cran-rtsne 199s r-cran-shiny r-cran-data.table r-cran-formattable r-cran-network 199s r-cran-bit64 r-cran-pkgdown r-cran-zeallot r-cran-markdown r-cran-runit 199s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 199s x11-xserver-utils 199s The following NEW packages will be installed: 199s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-x86-64-linux-gnu 199s cpp-x86-64-linux-gnu dctrl-tools fontconfig fonts-glyphicons-halflings g++ 199s g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 199s gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-14 199s gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools libamd3 199s libasan8 libatomic1 libblas-dev libblas3 libbz2-dev libcairo2 libcc1-0 199s libcolamd3 libdatrie1 libdeflate-dev libgcc-14-dev libgfortran-14-dev 199s libgfortran5 libglpk40 libhwasan0 libice6 libicu-dev libisl23 libitm1 199s libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap liblapack-dev 199s liblapack3 liblsan0 libltdl7 liblzma-dev libmpc3 libncurses-dev 199s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 199s libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 199s libpixman-1-0 libpkgconf3 libpng-dev libquadmath0 libreadline-dev libsm6 199s libstdc++-14-dev libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 199s libtirpc-dev libtk8.6 libtsan2 libubsan1 libxcb-render0 libxcb-shm0 libxft2 199s libxrender1 libxss1 libxt6t64 littler node-html5shiv pkg-r-autopkgtest 199s pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics r-bioc-graph 199s r-cran-ape r-cran-askpass r-cran-brio r-cran-ca r-cran-callr r-cran-cli 199s r-cran-cluster r-cran-codetools r-cran-colorspace r-cran-covr r-cran-cpp11 199s r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest 199s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-foreach r-cran-fs 199s r-cran-gclus r-cran-generics r-cran-glue r-cran-httr r-cran-igraph 199s r-cran-iterators r-cran-jsonlite r-cran-lattice r-cran-lazyeval 199s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 199s r-cran-mgcv r-cran-mime r-cran-nlme r-cran-openssl r-cran-permute 199s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 199s r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-purrr 199s r-cran-qap r-cran-r6 r-cran-rcpp r-cran-registry r-cran-rematch2 r-cran-rex 199s r-cran-rlang r-cran-rprojroot r-cran-seriation r-cran-stringi r-cran-stringr 199s r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidygraph r-cran-tidyr 199s r-cran-tidyselect r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan 199s r-cran-waldo r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 199s zlib1g-dev 199s 0 upgraded, 170 newly installed, 0 to remove and 0 not upgraded. 199s Need to get 191 MB/191 MB of archives. 199s After this operation, 525 MB of additional disk space will be used. 199s Get:1 /tmp/autopkgtest.2xUT5b/2-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [752 B] 199s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 libisl23 amd64 0.26-3build1 [680 kB] 199s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libmpc3 amd64 1.3.1-1build1 [54.5 kB] 199s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [11.9 MB] 199s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-14 amd64 14.1.0-5ubuntu1 [1030 B] 199s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [5452 B] 199s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp amd64 4:14.1.0-2ubuntu1 [22.4 kB] 199s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libcc1-0 amd64 14.1.0-5ubuntu1 [47.6 kB] 199s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 libitm1 amd64 14.1.0-5ubuntu1 [29.1 kB] 199s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 libatomic1 amd64 14.1.0-5ubuntu1 [10.3 kB] 199s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 libasan8 amd64 14.1.0-5ubuntu1 [2997 kB] 199s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 liblsan0 amd64 14.1.0-5ubuntu1 [1317 kB] 199s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libtsan2 amd64 14.1.0-5ubuntu1 [2733 kB] 199s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 libubsan1 amd64 14.1.0-5ubuntu1 [1178 kB] 199s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libhwasan0 amd64 14.1.0-5ubuntu1 [1634 kB] 199s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libquadmath0 amd64 14.1.0-5ubuntu1 [153 kB] 199s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcc-14-dev amd64 14.1.0-5ubuntu1 [2813 kB] 199s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [23.4 MB] 200s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-14 amd64 14.1.0-5ubuntu1 [516 kB] 200s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1214 B] 200s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc amd64 4:14.1.0-2ubuntu1 [5000 B] 200s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libstdc++-14-dev amd64 14.1.0-5ubuntu1 [2476 kB] 200s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [13.4 MB] 200s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-14 amd64 14.1.0-5ubuntu1 [18.0 kB] 200s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [966 B] 200s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 g++ amd64 4:14.1.0-2ubuntu1 [1100 B] 200s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 200s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 dctrl-tools amd64 2.24-3build3 [106 kB] 200s Get:29 http://ftpmaster.internal/ubuntu oracular/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 200s Get:30 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 200s Get:31 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-5ubuntu1 [909 kB] 200s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran-14-dev amd64 14.1.0-5ubuntu1 [965 kB] 200s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.1.0-5ubuntu1 [12.6 MB] 200s Get:34 http://ftpmaster.internal/ubuntu oracular/main amd64 gfortran-14 amd64 14.1.0-5ubuntu1 [10.6 kB] 200s Get:35 http://ftpmaster.internal/ubuntu oracular/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2ubuntu1 [1022 B] 200s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 gfortran amd64 4:14.1.0-2ubuntu1 [1172 B] 200s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 icu-devtools amd64 74.2-1ubuntu3 [212 kB] 200s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 libsuitesparseconfig7 amd64 1:7.7.0+dfsg-5 [13.0 kB] 200s Get:39 http://ftpmaster.internal/ubuntu oracular/universe amd64 libamd3 amd64 1:7.7.0+dfsg-5 [27.2 kB] 200s Get:40 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 200s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas-dev amd64 3.12.0-3build1 [170 kB] 200s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 libbz2-dev amd64 1.0.8-5.1 [33.6 kB] 200s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 200s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 200s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 200s Get:46 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 200s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo2 amd64 1.18.0-3build1 [566 kB] 200s Get:48 http://ftpmaster.internal/ubuntu oracular/main amd64 libcolamd3 amd64 1:7.7.0+dfsg-5 [19.4 kB] 200s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 200s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 libdeflate-dev amd64 1.20-1 [55.8 kB] 200s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 libltdl7 amd64 2.4.7-7build1 [40.3 kB] 200s Get:52 http://ftpmaster.internal/ubuntu oracular/universe amd64 libglpk40 amd64 5.0-1build2 [369 kB] 200s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 200s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB] 200s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 libicu-dev amd64 74.2-1ubuntu3 [11.9 MB] 200s Get:56 http://ftpmaster.internal/ubuntu oracular/main amd64 libjpeg-turbo8-dev amd64 2.1.5-2ubuntu2 [295 kB] 200s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 200s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 200s Get:59 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 200s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 200s Get:61 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack-dev amd64 3.12.0-3build1 [5196 kB] 200s Get:62 http://ftpmaster.internal/ubuntu oracular/main amd64 libncurses-dev amd64 6.5-2 [384 kB] 200s Get:63 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 200s Get:64 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 200s Get:65 http://ftpmaster.internal/ubuntu oracular/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [233 kB] 200s Get:66 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [42.3 kB] 200s Get:67 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [28.7 kB] 200s Get:68 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 200s Get:69 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 200s Get:70 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcre2-16-0 amd64 10.42-4ubuntu2 [210 kB] 200s Get:71 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcre2-32-0 amd64 10.42-4ubuntu2 [197 kB] 200s Get:72 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcre2-posix3 amd64 10.42-4ubuntu2 [6686 B] 200s Get:73 http://ftpmaster.internal/ubuntu oracular/main amd64 libpcre2-dev amd64 10.42-4ubuntu2 [737 kB] 200s Get:74 http://ftpmaster.internal/ubuntu oracular/main amd64 libpkgconf3 amd64 1.8.1-3 [30.7 kB] 200s Get:75 http://ftpmaster.internal/ubuntu oracular/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1ubuntu2 [894 kB] 200s Get:76 http://ftpmaster.internal/ubuntu oracular/main amd64 libpng-dev amd64 1.6.43-5build1 [264 kB] 200s Get:77 http://ftpmaster.internal/ubuntu oracular/main amd64 libreadline-dev amd64 8.2-4build1 [167 kB] 200s Get:78 http://ftpmaster.internal/ubuntu oracular/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB] 200s Get:79 http://ftpmaster.internal/ubuntu oracular/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 200s Get:80 http://ftpmaster.internal/ubuntu oracular/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 200s Get:81 http://ftpmaster.internal/ubuntu oracular/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 200s Get:82 http://ftpmaster.internal/ubuntu oracular/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 200s Get:83 http://ftpmaster.internal/ubuntu oracular/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 200s Get:84 http://ftpmaster.internal/ubuntu oracular/main amd64 zip amd64 3.0-13build1 [175 kB] 200s Get:85 http://ftpmaster.internal/ubuntu oracular/main amd64 unzip amd64 6.0-28ubuntu5 [180 kB] 200s Get:86 http://ftpmaster.internal/ubuntu oracular/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 200s Get:87 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-base-core amd64 4.4.1-1 [28.5 MB] 200s Get:88 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-littler amd64 0.3.20-1 [96.0 kB] 200s Get:89 http://ftpmaster.internal/ubuntu oracular/universe amd64 littler all 0.3.20-1 [2486 B] 200s Get:90 http://ftpmaster.internal/ubuntu oracular/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 200s Get:91 http://ftpmaster.internal/ubuntu oracular/main amd64 liblzma-dev amd64 5.6.2-2 [176 kB] 200s Get:92 http://ftpmaster.internal/ubuntu oracular/main amd64 pkgconf-bin amd64 1.8.1-3 [21.0 kB] 200s Get:93 http://ftpmaster.internal/ubuntu oracular/main amd64 pkgconf amd64 1.8.1-3 [16.8 kB] 200s Get:94 http://ftpmaster.internal/ubuntu oracular/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [193 kB] 200s Get:95 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-base-dev all 4.4.1-1 [4338 B] 200s Get:96 http://ftpmaster.internal/ubuntu oracular/universe amd64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 200s Get:97 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-bioc-biocgenerics all 0.48.1-2 [595 kB] 200s Get:98 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-bioc-graph amd64 1.80.0-1 [1289 kB] 200s Get:99 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 200s Get:100 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-nlme amd64 3.1.165-1 [2309 kB] 200s Get:101 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 200s Get:102 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rcpp amd64 1.0.12-1 [1981 kB] 200s Get:103 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-digest amd64 0.6.36-1 [199 kB] 200s Get:104 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ape amd64 5.8-1 [2923 kB] 200s Get:105 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-sys amd64 3.4.2-1 [44.6 kB] 200s Get:106 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-askpass amd64 1.2.0-1 [24.6 kB] 200s Get:107 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB] 200s Get:108 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ca all 0.71.1-2build1 [243 kB] 200s Get:109 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-ps amd64 1.7.6-1 [313 kB] 200s Get:110 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-r6 all 2.5.1-1 [99.0 kB] 200s Get:111 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-processx amd64 3.8.4-1 [353 kB] 200s Get:112 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-callr all 3.7.6-1 [458 kB] 200s Get:113 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cli amd64 3.6.2-1 [1380 kB] 200s Get:114 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cluster amd64 2.1.6-1build1 [553 kB] 200s Get:115 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 200s Get:116 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1541 kB] 200s Get:117 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [441 kB] 200s Get:118 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lazyeval amd64 0.2.2-1build1 [144 kB] 200s Get:119 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rex all 1.2.1-1 [129 kB] 200s Get:120 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-curl amd64 5.2.1+dfsg-1 [180 kB] 200s Get:121 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 200s Get:122 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-openssl amd64 2.1.1+dfsg-2build2 [402 kB] 200s Get:123 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 200s Get:124 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-crayon all 1.5.2-1 [164 kB] 200s Get:125 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-withr all 2.5.0-1 [225 kB] 200s Get:126 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-yaml amd64 2.3.8-2 [108 kB] 200s Get:127 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-covr amd64 3.6.4+dfsg-1 [303 kB] 200s Get:128 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cpp11 all 0.4.7-1 [266 kB] 200s Get:129 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-desc all 1.4.3-1 [359 kB] 200s Get:130 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB] 200s Get:131 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB] 200s Get:132 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-glue amd64 1.7.0-1 [154 kB] 200s Get:133 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rlang amd64 1.1.4-1 [1708 kB] 200s Get:134 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 200s Get:135 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 200s Get:136 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-fansi amd64 1.0.5-1 [619 kB] 200s Get:137 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 200s Get:138 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 200s Get:139 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 200s Get:140 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 200s Get:141 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [415 kB] 200s Get:142 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB] 200s Get:143 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-dplyr amd64 1.1.4-1 [1515 kB] 200s Get:144 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-evaluate all 0.24.0-1 [93.5 kB] 200s Get:145 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 200s Get:146 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 200s Get:147 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-fs amd64 1.6.4+dfsg-1 [245 kB] 200s Get:148 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-gclus all 1.3.2-2build1 [406 kB] 200s Get:149 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-matrix amd64 1.7-0-3 [4185 kB] 200s Get:150 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 r-cran-igraph amd64 2.0.3-1 [5098 kB] 200s Get:151 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 200s Get:152 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 201s Get:153 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 201s Get:154 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgbuild all 1.4.4-1 [212 kB] 201s Get:155 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] 201s Get:156 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB] 201s Get:157 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB] 201s Get:158 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-purrr amd64 1.0.2-1 [502 kB] 201s Get:159 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB] 201s Get:160 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-registry all 0.5-1-2build1 [202 kB] 201s Get:161 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 201s Get:162 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB] 201s Get:163 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-vegan amd64 2.6-6.1+dfsg-1 [3123 kB] 201s Get:164 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-seriation amd64 1.5.5-1 [1325 kB] 201s Get:165 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-stringi amd64 1.8.3-1 [873 kB] 201s Get:166 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB] 201s Get:167 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-waldo all 0.5.2-1build1 [120 kB] 201s Get:168 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-testthat amd64 3.2.1.1-1 [1636 kB] 201s Get:169 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB] 201s Get:170 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-tidygraph amd64 1.3.0-1 [544 kB] 201s Preconfiguring packages ... 201s Fetched 191 MB in 1s (135 MB/s) 201s Selecting previously unselected package libisl23:amd64. 201s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74530 files and directories currently installed.) 201s Preparing to unpack .../000-libisl23_0.26-3build1_amd64.deb ... 201s Unpacking libisl23:amd64 (0.26-3build1) ... 201s Selecting previously unselected package libmpc3:amd64. 201s Preparing to unpack .../001-libmpc3_1.3.1-1build1_amd64.deb ... 201s Unpacking libmpc3:amd64 (1.3.1-1build1) ... 201s Selecting previously unselected package cpp-14-x86-64-linux-gnu. 201s Preparing to unpack .../002-cpp-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 201s Unpacking cpp-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package cpp-14. 202s Preparing to unpack .../003-cpp-14_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking cpp-14 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package cpp-x86-64-linux-gnu. 202s Preparing to unpack .../004-cpp-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 202s Unpacking cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 202s Selecting previously unselected package cpp. 202s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_amd64.deb ... 202s Unpacking cpp (4:14.1.0-2ubuntu1) ... 202s Selecting previously unselected package libcc1-0:amd64. 202s Preparing to unpack .../006-libcc1-0_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libcc1-0:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libitm1:amd64. 202s Preparing to unpack .../007-libitm1_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libitm1:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libatomic1:amd64. 202s Preparing to unpack .../008-libatomic1_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libatomic1:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libasan8:amd64. 202s Preparing to unpack .../009-libasan8_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libasan8:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package liblsan0:amd64. 202s Preparing to unpack .../010-liblsan0_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking liblsan0:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libtsan2:amd64. 202s Preparing to unpack .../011-libtsan2_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libtsan2:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libubsan1:amd64. 202s Preparing to unpack .../012-libubsan1_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libubsan1:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libhwasan0:amd64. 202s Preparing to unpack .../013-libhwasan0_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libhwasan0:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libquadmath0:amd64. 202s Preparing to unpack .../014-libquadmath0_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libquadmath0:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package libgcc-14-dev:amd64. 202s Preparing to unpack .../015-libgcc-14-dev_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking libgcc-14-dev:amd64 (14.1.0-5ubuntu1) ... 202s Selecting previously unselected package gcc-14-x86-64-linux-gnu. 202s Preparing to unpack .../016-gcc-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 202s Unpacking gcc-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package gcc-14. 203s Preparing to unpack .../017-gcc-14_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking gcc-14 (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package gcc-x86-64-linux-gnu. 203s Preparing to unpack .../018-gcc-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 203s Unpacking gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 203s Selecting previously unselected package gcc. 203s Preparing to unpack .../019-gcc_4%3a14.1.0-2ubuntu1_amd64.deb ... 203s Unpacking gcc (4:14.1.0-2ubuntu1) ... 203s Selecting previously unselected package libstdc++-14-dev:amd64. 203s Preparing to unpack .../020-libstdc++-14-dev_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking libstdc++-14-dev:amd64 (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package g++-14-x86-64-linux-gnu. 203s Preparing to unpack .../021-g++-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking g++-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package g++-14. 203s Preparing to unpack .../022-g++-14_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking g++-14 (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package g++-x86-64-linux-gnu. 203s Preparing to unpack .../023-g++-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 203s Unpacking g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 203s Selecting previously unselected package g++. 203s Preparing to unpack .../024-g++_4%3a14.1.0-2ubuntu1_amd64.deb ... 203s Unpacking g++ (4:14.1.0-2ubuntu1) ... 203s Selecting previously unselected package build-essential. 203s Preparing to unpack .../025-build-essential_12.10ubuntu1_amd64.deb ... 203s Unpacking build-essential (12.10ubuntu1) ... 203s Selecting previously unselected package dctrl-tools. 203s Preparing to unpack .../026-dctrl-tools_2.24-3build3_amd64.deb ... 203s Unpacking dctrl-tools (2.24-3build3) ... 203s Selecting previously unselected package fontconfig. 203s Preparing to unpack .../027-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 203s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 203s Selecting previously unselected package fonts-glyphicons-halflings. 203s Preparing to unpack .../028-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 203s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 203s Selecting previously unselected package libgfortran5:amd64. 203s Preparing to unpack .../029-libgfortran5_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking libgfortran5:amd64 (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package libgfortran-14-dev:amd64. 203s Preparing to unpack .../030-libgfortran-14-dev_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking libgfortran-14-dev:amd64 (14.1.0-5ubuntu1) ... 203s Selecting previously unselected package gfortran-14-x86-64-linux-gnu. 203s Preparing to unpack .../031-gfortran-14-x86-64-linux-gnu_14.1.0-5ubuntu1_amd64.deb ... 203s Unpacking gfortran-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 204s Selecting previously unselected package gfortran-14. 204s Preparing to unpack .../032-gfortran-14_14.1.0-5ubuntu1_amd64.deb ... 204s Unpacking gfortran-14 (14.1.0-5ubuntu1) ... 204s Selecting previously unselected package gfortran-x86-64-linux-gnu. 204s Preparing to unpack .../033-gfortran-x86-64-linux-gnu_4%3a14.1.0-2ubuntu1_amd64.deb ... 204s Unpacking gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 204s Selecting previously unselected package gfortran. 204s Preparing to unpack .../034-gfortran_4%3a14.1.0-2ubuntu1_amd64.deb ... 204s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 204s Selecting previously unselected package icu-devtools. 204s Preparing to unpack .../035-icu-devtools_74.2-1ubuntu3_amd64.deb ... 204s Unpacking icu-devtools (74.2-1ubuntu3) ... 204s Selecting previously unselected package libsuitesparseconfig7:amd64. 204s Preparing to unpack .../036-libsuitesparseconfig7_1%3a7.7.0+dfsg-5_amd64.deb ... 204s Unpacking libsuitesparseconfig7:amd64 (1:7.7.0+dfsg-5) ... 204s Selecting previously unselected package libamd3:amd64. 204s Preparing to unpack .../037-libamd3_1%3a7.7.0+dfsg-5_amd64.deb ... 204s Unpacking libamd3:amd64 (1:7.7.0+dfsg-5) ... 204s Selecting previously unselected package libblas3:amd64. 204s Preparing to unpack .../038-libblas3_3.12.0-3build1_amd64.deb ... 204s Unpacking libblas3:amd64 (3.12.0-3build1) ... 204s Selecting previously unselected package libblas-dev:amd64. 204s Preparing to unpack .../039-libblas-dev_3.12.0-3build1_amd64.deb ... 204s Unpacking libblas-dev:amd64 (3.12.0-3build1) ... 204s Selecting previously unselected package libbz2-dev:amd64. 204s Preparing to unpack .../040-libbz2-dev_1.0.8-5.1_amd64.deb ... 204s Unpacking libbz2-dev:amd64 (1.0.8-5.1) ... 204s Selecting previously unselected package libpixman-1-0:amd64. 204s Preparing to unpack .../041-libpixman-1-0_0.42.2-1build1_amd64.deb ... 204s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 204s Selecting previously unselected package libxcb-render0:amd64. 204s Preparing to unpack .../042-libxcb-render0_1.17.0-2_amd64.deb ... 204s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 204s Selecting previously unselected package libxcb-shm0:amd64. 204s Preparing to unpack .../043-libxcb-shm0_1.17.0-2_amd64.deb ... 204s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 204s Selecting previously unselected package libxrender1:amd64. 204s Preparing to unpack .../044-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 204s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 204s Selecting previously unselected package libcairo2:amd64. 204s Preparing to unpack .../045-libcairo2_1.18.0-3build1_amd64.deb ... 204s Unpacking libcairo2:amd64 (1.18.0-3build1) ... 204s Selecting previously unselected package libcolamd3:amd64. 204s Preparing to unpack .../046-libcolamd3_1%3a7.7.0+dfsg-5_amd64.deb ... 204s Unpacking libcolamd3:amd64 (1:7.7.0+dfsg-5) ... 204s Selecting previously unselected package libdatrie1:amd64. 204s Preparing to unpack .../047-libdatrie1_0.2.13-3build1_amd64.deb ... 204s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 204s Selecting previously unselected package libdeflate-dev:amd64. 204s Preparing to unpack .../048-libdeflate-dev_1.20-1_amd64.deb ... 204s Unpacking libdeflate-dev:amd64 (1.20-1) ... 204s Selecting previously unselected package libltdl7:amd64. 204s Preparing to unpack .../049-libltdl7_2.4.7-7build1_amd64.deb ... 204s Unpacking libltdl7:amd64 (2.4.7-7build1) ... 204s Selecting previously unselected package libglpk40:amd64. 204s Preparing to unpack .../050-libglpk40_5.0-1build2_amd64.deb ... 204s Unpacking libglpk40:amd64 (5.0-1build2) ... 204s Selecting previously unselected package x11-common. 204s Preparing to unpack .../051-x11-common_1%3a7.7+23ubuntu3_all.deb ... 204s Unpacking x11-common (1:7.7+23ubuntu3) ... 204s Selecting previously unselected package libice6:amd64. 204s Preparing to unpack .../052-libice6_2%3a1.0.10-1build3_amd64.deb ... 204s Unpacking libice6:amd64 (2:1.0.10-1build3) ... 204s Selecting previously unselected package libicu-dev:amd64. 204s Preparing to unpack .../053-libicu-dev_74.2-1ubuntu3_amd64.deb ... 204s Unpacking libicu-dev:amd64 (74.2-1ubuntu3) ... 204s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 204s Preparing to unpack .../054-libjpeg-turbo8-dev_2.1.5-2ubuntu2_amd64.deb ... 204s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu2) ... 204s Selecting previously unselected package libjpeg8-dev:amd64. 204s Preparing to unpack .../055-libjpeg8-dev_8c-2ubuntu11_amd64.deb ... 204s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu11) ... 204s Selecting previously unselected package libjpeg-dev:amd64. 204s Preparing to unpack .../056-libjpeg-dev_8c-2ubuntu11_amd64.deb ... 204s Unpacking libjpeg-dev:amd64 (8c-2ubuntu11) ... 205s Selecting previously unselected package libjs-bootstrap. 205s Preparing to unpack .../057-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 205s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 205s Selecting previously unselected package liblapack3:amd64. 205s Preparing to unpack .../058-liblapack3_3.12.0-3build1_amd64.deb ... 205s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 205s Selecting previously unselected package liblapack-dev:amd64. 205s Preparing to unpack .../059-liblapack-dev_3.12.0-3build1_amd64.deb ... 205s Unpacking liblapack-dev:amd64 (3.12.0-3build1) ... 205s Selecting previously unselected package libncurses-dev:amd64. 205s Preparing to unpack .../060-libncurses-dev_6.5-2_amd64.deb ... 205s Unpacking libncurses-dev:amd64 (6.5-2) ... 205s Selecting previously unselected package libthai-data. 205s Preparing to unpack .../061-libthai-data_0.1.29-2build1_all.deb ... 205s Unpacking libthai-data (0.1.29-2build1) ... 205s Selecting previously unselected package libthai0:amd64. 205s Preparing to unpack .../062-libthai0_0.1.29-2build1_amd64.deb ... 205s Unpacking libthai0:amd64 (0.1.29-2build1) ... 205s Selecting previously unselected package libpango-1.0-0:amd64. 205s Preparing to unpack .../063-libpango-1.0-0_1.54.0+ds-1_amd64.deb ... 205s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-1) ... 205s Selecting previously unselected package libpangoft2-1.0-0:amd64. 205s Preparing to unpack .../064-libpangoft2-1.0-0_1.54.0+ds-1_amd64.deb ... 205s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 205s Selecting previously unselected package libpangocairo-1.0-0:amd64. 205s Preparing to unpack .../065-libpangocairo-1.0-0_1.54.0+ds-1_amd64.deb ... 205s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 205s Selecting previously unselected package libpaper1:amd64. 205s Preparing to unpack .../066-libpaper1_1.1.29build1_amd64.deb ... 205s Unpacking libpaper1:amd64 (1.1.29build1) ... 205s Selecting previously unselected package libpaper-utils. 205s Preparing to unpack .../067-libpaper-utils_1.1.29build1_amd64.deb ... 205s Unpacking libpaper-utils (1.1.29build1) ... 205s Selecting previously unselected package libpcre2-16-0:amd64. 205s Preparing to unpack .../068-libpcre2-16-0_10.42-4ubuntu2_amd64.deb ... 205s Unpacking libpcre2-16-0:amd64 (10.42-4ubuntu2) ... 205s Selecting previously unselected package libpcre2-32-0:amd64. 205s Preparing to unpack .../069-libpcre2-32-0_10.42-4ubuntu2_amd64.deb ... 205s Unpacking libpcre2-32-0:amd64 (10.42-4ubuntu2) ... 205s Selecting previously unselected package libpcre2-posix3:amd64. 205s Preparing to unpack .../070-libpcre2-posix3_10.42-4ubuntu2_amd64.deb ... 205s Unpacking libpcre2-posix3:amd64 (10.42-4ubuntu2) ... 205s Selecting previously unselected package libpcre2-dev:amd64. 205s Preparing to unpack .../071-libpcre2-dev_10.42-4ubuntu2_amd64.deb ... 205s Unpacking libpcre2-dev:amd64 (10.42-4ubuntu2) ... 205s Selecting previously unselected package libpkgconf3:amd64. 205s Preparing to unpack .../072-libpkgconf3_1.8.1-3_amd64.deb ... 205s Unpacking libpkgconf3:amd64 (1.8.1-3) ... 205s Selecting previously unselected package zlib1g-dev:amd64. 205s Preparing to unpack .../073-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_amd64.deb ... 205s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3.1ubuntu2) ... 205s Selecting previously unselected package libpng-dev:amd64. 205s Preparing to unpack .../074-libpng-dev_1.6.43-5build1_amd64.deb ... 205s Unpacking libpng-dev:amd64 (1.6.43-5build1) ... 205s Selecting previously unselected package libreadline-dev:amd64. 205s Preparing to unpack .../075-libreadline-dev_8.2-4build1_amd64.deb ... 205s Unpacking libreadline-dev:amd64 (8.2-4build1) ... 205s Selecting previously unselected package libsm6:amd64. 205s Preparing to unpack .../076-libsm6_2%3a1.2.3-1build3_amd64.deb ... 205s Unpacking libsm6:amd64 (2:1.2.3-1build3) ... 205s Selecting previously unselected package libtcl8.6:amd64. 205s Preparing to unpack .../077-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 205s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 205s Selecting previously unselected package libxft2:amd64. 205s Preparing to unpack .../078-libxft2_2.3.6-1build1_amd64.deb ... 205s Unpacking libxft2:amd64 (2.3.6-1build1) ... 205s Selecting previously unselected package libxss1:amd64. 205s Preparing to unpack .../079-libxss1_1%3a1.2.3-1build3_amd64.deb ... 205s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 205s Selecting previously unselected package libtk8.6:amd64. 205s Preparing to unpack .../080-libtk8.6_8.6.14-1build1_amd64.deb ... 205s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 205s Selecting previously unselected package libxt6t64:amd64. 206s Preparing to unpack .../081-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 206s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 206s Selecting previously unselected package zip. 206s Preparing to unpack .../082-zip_3.0-13build1_amd64.deb ... 206s Unpacking zip (3.0-13build1) ... 206s Selecting previously unselected package unzip. 206s Preparing to unpack .../083-unzip_6.0-28ubuntu5_amd64.deb ... 206s Unpacking unzip (6.0-28ubuntu5) ... 206s Selecting previously unselected package xdg-utils. 206s Preparing to unpack .../084-xdg-utils_1.2.1-0ubuntu1_all.deb ... 206s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 206s Selecting previously unselected package r-base-core. 206s Preparing to unpack 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206s Preparing to unpack .../091-pkgconf_1.8.1-3_amd64.deb ... 206s Unpacking pkgconf:amd64 (1.8.1-3) ... 206s Selecting previously unselected package libtirpc-dev:amd64. 206s Preparing to unpack .../092-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... 206s Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 206s Selecting previously unselected package r-base-dev. 206s Preparing to unpack .../093-r-base-dev_4.4.1-1_all.deb ... 206s Unpacking r-base-dev (4.4.1-1) ... 206s Selecting previously unselected package pkg-r-autopkgtest. 206s Preparing to unpack .../094-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 206s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 206s Selecting previously unselected package r-bioc-biocgenerics. 206s Preparing to unpack .../095-r-bioc-biocgenerics_0.48.1-2_all.deb ... 206s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 206s Selecting previously unselected package r-bioc-graph. 206s Preparing to unpack .../096-r-bioc-graph_1.80.0-1_amd64.deb ... 206s Unpacking r-bioc-graph (1.80.0-1) ... 206s Selecting previously unselected package r-cran-lattice. 206s Preparing to unpack .../097-r-cran-lattice_0.22-6-1_amd64.deb ... 206s Unpacking r-cran-lattice (0.22-6-1) ... 206s Selecting previously unselected package r-cran-nlme. 206s Preparing to unpack .../098-r-cran-nlme_3.1.165-1_amd64.deb ... 206s Unpacking r-cran-nlme (3.1.165-1) ... 206s Selecting previously unselected package r-cran-pkgkitten. 206s Preparing to unpack .../099-r-cran-pkgkitten_0.2.3-1_all.deb ... 206s Unpacking r-cran-pkgkitten (0.2.3-1) ... 206s Selecting previously unselected package r-cran-rcpp. 206s Preparing to unpack .../100-r-cran-rcpp_1.0.12-1_amd64.deb ... 206s Unpacking r-cran-rcpp (1.0.12-1) ... 207s Selecting previously unselected package r-cran-digest. 207s Preparing to unpack .../101-r-cran-digest_0.6.36-1_amd64.deb ... 207s Unpacking r-cran-digest (0.6.36-1) ... 207s Selecting previously unselected package r-cran-ape. 207s Preparing to unpack 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.../108-r-cran-r6_2.5.1-1_all.deb ... 207s Unpacking r-cran-r6 (2.5.1-1) ... 207s Selecting previously unselected package r-cran-processx. 207s Preparing to unpack .../109-r-cran-processx_3.8.4-1_amd64.deb ... 207s Unpacking r-cran-processx (3.8.4-1) ... 207s Selecting previously unselected package r-cran-callr. 207s Preparing to unpack .../110-r-cran-callr_3.7.6-1_all.deb ... 207s Unpacking r-cran-callr (3.7.6-1) ... 207s Selecting previously unselected package r-cran-cli. 207s Preparing to unpack .../111-r-cran-cli_3.6.2-1_amd64.deb ... 207s Unpacking r-cran-cli (3.6.2-1) ... 207s Selecting previously unselected package r-cran-cluster. 207s Preparing to unpack .../112-r-cran-cluster_2.1.6-1build1_amd64.deb ... 207s Unpacking r-cran-cluster (2.1.6-1build1) ... 207s Selecting previously unselected package r-cran-codetools. 207s Preparing to unpack .../113-r-cran-codetools_0.2-20-1_all.deb ... 207s Unpacking r-cran-codetools (0.2-20-1) ... 207s Selecting previously unselected package r-cran-colorspace. 207s Preparing to unpack .../114-r-cran-colorspace_2.1-0+dfsg-1_amd64.deb ... 207s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 207s Selecting previously unselected package r-cran-jsonlite. 207s Preparing to unpack .../115-r-cran-jsonlite_1.8.8+dfsg-1_amd64.deb ... 207s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 207s Selecting previously unselected package r-cran-lazyeval. 207s Preparing to unpack .../116-r-cran-lazyeval_0.2.2-1build1_amd64.deb ... 207s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 207s Selecting previously unselected package r-cran-rex. 207s Preparing to unpack .../117-r-cran-rex_1.2.1-1_all.deb ... 207s Unpacking r-cran-rex (1.2.1-1) ... 207s Selecting previously unselected package r-cran-curl. 207s Preparing to unpack .../118-r-cran-curl_5.2.1+dfsg-1_amd64.deb ... 207s Unpacking r-cran-curl (5.2.1+dfsg-1) ... 207s Selecting previously unselected package r-cran-mime. 207s Preparing to unpack .../119-r-cran-mime_0.12-2_amd64.deb ... 207s Unpacking r-cran-mime (0.12-2) ... 207s Selecting previously unselected package r-cran-openssl. 207s Preparing to unpack .../120-r-cran-openssl_2.1.1+dfsg-2build2_amd64.deb ... 207s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ... 207s Selecting previously unselected package r-cran-httr. 207s Preparing to unpack .../121-r-cran-httr_1.4.7+dfsg-1_all.deb ... 207s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 207s Selecting previously unselected package r-cran-crayon. 207s Preparing to unpack .../122-r-cran-crayon_1.5.2-1_all.deb ... 207s Unpacking r-cran-crayon (1.5.2-1) ... 207s Selecting previously unselected package r-cran-withr. 207s Preparing to unpack .../123-r-cran-withr_2.5.0-1_all.deb ... 207s Unpacking r-cran-withr (2.5.0-1) ... 207s Selecting previously unselected package r-cran-yaml. 207s Preparing to unpack .../124-r-cran-yaml_2.3.8-2_amd64.deb ... 207s Unpacking r-cran-yaml (2.3.8-2) ... 207s Selecting previously unselected package r-cran-covr. 207s Preparing to unpack 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208s Preparing to unpack .../131-r-cran-rlang_1.1.4-1_amd64.deb ... 208s Unpacking r-cran-rlang (1.1.4-1) ... 208s Selecting previously unselected package r-cran-lifecycle. 208s Preparing to unpack .../132-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 208s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 208s Selecting previously unselected package r-cran-magrittr. 208s Preparing to unpack .../133-r-cran-magrittr_2.0.3-1_amd64.deb ... 208s Unpacking r-cran-magrittr (2.0.3-1) ... 208s Selecting previously unselected package r-cran-fansi. 208s Preparing to unpack .../134-r-cran-fansi_1.0.5-1_amd64.deb ... 208s Unpacking r-cran-fansi (1.0.5-1) ... 208s Selecting previously unselected package r-cran-utf8. 208s Preparing to unpack .../135-r-cran-utf8_1.2.4-1_amd64.deb ... 208s Unpacking r-cran-utf8 (1.2.4-1) ... 208s Selecting previously unselected package r-cran-vctrs. 208s Preparing to unpack .../136-r-cran-vctrs_0.6.5-1_amd64.deb ... 208s Unpacking r-cran-vctrs (0.6.5-1) ... 208s Selecting previously unselected package r-cran-pillar. 208s Preparing to unpack .../137-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 208s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 208s Selecting previously unselected package r-cran-pkgconfig. 208s Preparing to unpack .../138-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 208s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 208s Selecting previously unselected package r-cran-tibble. 208s Preparing to unpack .../139-r-cran-tibble_3.2.1+dfsg-2_amd64.deb ... 208s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 208s Selecting previously unselected package r-cran-tidyselect. 208s Preparing to unpack .../140-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ... 208s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 208s Selecting previously unselected package r-cran-dplyr. 208s Preparing to unpack .../141-r-cran-dplyr_1.1.4-1_amd64.deb ... 208s Unpacking r-cran-dplyr (1.1.4-1) ... 208s Selecting previously unselected package r-cran-evaluate. 208s Preparing to unpack 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unselected package r-cran-igraph. 208s Preparing to unpack .../148-r-cran-igraph_2.0.3-1_amd64.deb ... 208s Unpacking r-cran-igraph (2.0.3-1) ... 209s Selecting previously unselected package r-cran-mass. 209s Preparing to unpack .../149-r-cran-mass_7.3-61-1_amd64.deb ... 209s Unpacking r-cran-mass (7.3-61-1) ... 209s Selecting previously unselected package r-cran-mgcv. 209s Preparing to unpack .../150-r-cran-mgcv_1.9-1-1_amd64.deb ... 209s Unpacking r-cran-mgcv (1.9-1-1) ... 209s Selecting previously unselected package r-cran-permute. 209s Preparing to unpack .../151-r-cran-permute_0.9-7-1_all.deb ... 209s Unpacking r-cran-permute (0.9-7-1) ... 209s Selecting previously unselected package r-cran-pkgbuild. 209s Preparing to unpack .../152-r-cran-pkgbuild_1.4.4-1_all.deb ... 209s Unpacking r-cran-pkgbuild (1.4.4-1) ... 209s Selecting previously unselected package r-cran-rprojroot. 209s Preparing to unpack .../153-r-cran-rprojroot_2.0.4-1_all.deb ... 209s Unpacking r-cran-rprojroot 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previously unselected package r-cran-waldo. 209s Preparing to unpack .../165-r-cran-waldo_0.5.2-1build1_all.deb ... 209s Unpacking r-cran-waldo (0.5.2-1build1) ... 209s Selecting previously unselected package r-cran-testthat. 209s Preparing to unpack .../166-r-cran-testthat_3.2.1.1-1_amd64.deb ... 209s Unpacking r-cran-testthat (3.2.1.1-1) ... 209s Selecting previously unselected package r-cran-tidyr. 209s Preparing to unpack .../167-r-cran-tidyr_1.3.1-1_amd64.deb ... 209s Unpacking r-cran-tidyr (1.3.1-1) ... 209s Selecting previously unselected package r-cran-tidygraph. 209s Preparing to unpack .../168-r-cran-tidygraph_1.3.0-1_amd64.deb ... 209s Unpacking r-cran-tidygraph (1.3.0-1) ... 209s Selecting previously unselected package autopkgtest-satdep. 209s Preparing to unpack .../169-2-autopkgtest-satdep.deb ... 209s Unpacking autopkgtest-satdep (0) ... 209s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ... 209s Setting up libpaper1:amd64 (1.1.29build1) ... 210s 210s Creating config file /etc/papersize with new version 210s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 212s Regenerating fonts cache... done. 212s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-2ubuntu2) ... 212s Setting up libncurses-dev:amd64 (6.5-2) ... 212s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 212s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 212s Setting up libxcb-render0:amd64 (1.17.0-2) ... 212s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 212s Setting up unzip (6.0-28ubuntu5) ... 212s Setting up x11-common (1:7.7+23ubuntu3) ... 212s Setting up node-html5shiv (3.7.3+dfsg-5) ... 212s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 212s Setting up libpaper-utils (1.1.29build1) ... 212s Setting up libreadline-dev:amd64 (8.2-4build1) ... 212s Setting up libcairo2:amd64 (1.18.0-3build1) ... 212s Setting up libpcre2-16-0:amd64 (10.42-4ubuntu2) ... 212s Setting up zip (3.0-13build1) ... 212s Setting up libpcre2-32-0:amd64 (10.42-4ubuntu2) ... 212s Setting up libblas3:amd64 (3.12.0-3build1) ... 212s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 212s Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... 212s Setting up libpkgconf3:amd64 (1.8.1-3) ... 212s Setting up libquadmath0:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libmpc3:amd64 (1.3.1-1build1) ... 212s Setting up libatomic1:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 212s Setting up icu-devtools (74.2-1ubuntu3) ... 212s Setting up pkgconf-bin (1.8.1-3) ... 212s Setting up libltdl7:amd64 (2.4.7-7build1) ... 212s Setting up libgfortran5:amd64 (14.1.0-5ubuntu1) ... 212s Setting up liblzma-dev:amd64 (5.6.2-2) ... 212s Setting up libubsan1:amd64 (14.1.0-5ubuntu1) ... 212s Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3.1ubuntu2) ... 212s Setting up libpcre2-posix3:amd64 (10.42-4ubuntu2) ... 212s Setting up libhwasan0:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libasan8:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libsuitesparseconfig7:amd64 (1:7.7.0+dfsg-5) ... 212s Setting up libthai-data (0.1.29-2build1) ... 212s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 212s Setting up libtsan2:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 212s Setting up libisl23:amd64 (0.26-3build1) ... 212s Setting up libdeflate-dev:amd64 (1.20-1) ... 212s Setting up libicu-dev:amd64 (74.2-1ubuntu3) ... 212s Setting up xdg-utils (1.2.1-0ubuntu1) ... 212s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 212s Setting up libcc1-0:amd64 (14.1.0-5ubuntu1) ... 212s Setting up liblsan0:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libblas-dev:amd64 (3.12.0-3build1) ... 212s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 212s Setting up dctrl-tools (2.24-3build3) ... 212s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 212s Setting up libitm1:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libbz2-dev:amd64 (1.0.8-5.1) ... 212s Setting up libice6:amd64 (2:1.0.10-1build3) ... 212s Setting up liblapack3:amd64 (3.12.0-3build1) ... 212s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 212s Setting up libxft2:amd64 (2.3.6-1build1) ... 212s Setting up libamd3:amd64 (1:7.7.0+dfsg-5) ... 212s Setting up libpcre2-dev:amd64 (10.42-4ubuntu2) ... 212s Setting up libcolamd3:amd64 (1:7.7.0+dfsg-5) ... 212s Setting up libtk8.6:amd64 (8.6.14-1build1) ... 212s Setting up libpng-dev:amd64 (1.6.43-5build1) ... 212s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 212s Setting up pkgconf:amd64 (1.8.1-3) ... 212s Setting up libthai0:amd64 (0.1.29-2build1) ... 212s Setting up libglpk40:amd64 (5.0-1build2) ... 212s Setting up liblapack-dev:amd64 (3.12.0-3build1) ... 212s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 212s Setting up cpp-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 212s Setting up cpp-14 (14.1.0-5ubuntu1) ... 212s Setting up libgcc-14-dev:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libstdc++-14-dev:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libsm6:amd64 (2:1.2.3-1build3) ... 212s Setting up cpp-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 212s Setting up libgfortran-14-dev:amd64 (14.1.0-5ubuntu1) ... 212s Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ... 212s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 212s Setting up cpp (4:14.1.0-2ubuntu1) ... 212s Setting up gcc-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 212s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 212s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 212s Setting up gcc-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 212s Setting up gcc-14 (14.1.0-5ubuntu1) ... 212s Setting up gfortran-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 212s Setting up r-base-core (4.4.1-1) ... 212s 212s Creating config file /etc/R/Renviron with new version 212s Setting up r-cran-crayon (1.5.2-1) ... 212s Setting up r-cran-lattice (0.22-6-1) ... 212s Setting up r-cran-ps (1.7.6-1) ... 212s Setting up r-cran-nlme (3.1.165-1) ... 212s Setting up g++-14-x86-64-linux-gnu (14.1.0-5ubuntu1) ... 212s Setting up r-cran-cluster (2.1.6-1build1) ... 212s Setting up g++-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 212s Setting up r-cran-lazyeval (0.2.2-1build1) ... 212s Setting up g++-14 (14.1.0-5ubuntu1) ... 212s Setting up r-cran-r6 (2.5.1-1) ... 212s Setting up r-cran-pkgkitten (0.2.3-1) ... 212s Setting up gfortran-14 (14.1.0-5ubuntu1) ... 212s Setting up r-cran-ca (0.71.1-2build1) ... 212s Setting up r-cran-magrittr (2.0.3-1) ... 212s Setting up r-cran-registry (0.5-1-2build1) ... 212s Setting up r-cran-littler (0.3.20-1) ... 212s Setting up r-cran-permute (0.9-7-1) ... 212s Setting up r-cran-fs (1.6.4+dfsg-1) ... 212s Setting up r-cran-rcpp (1.0.12-1) ... 212s Setting up r-cran-curl (5.2.1+dfsg-1) ... 212s Setting up r-cran-codetools (0.2-20-1) ... 212s Setting up r-cran-brio (1.1.5-1) ... 212s Setting up r-cran-diffobj (0.3.5-1) ... 212s Setting up r-bioc-biocgenerics (0.48.1-2) ... 212s Setting up r-cran-rlang (1.1.4-1) ... 212s Setting up littler (0.3.20-1) ... 212s Setting up r-cran-sys (3.4.2-1) ... 212s Setting up r-cran-gclus (1.3.2-2build1) ... 212s Setting up r-cran-withr (2.5.0-1) ... 212s Setting up r-cran-processx (3.8.4-1) ... 212s Setting up r-cran-mime (0.12-2) ... 212s Setting up r-cran-qap (0.1-2-1) ... 212s Setting up r-cran-praise (1.0.0-4build1) ... 212s Setting up r-cran-generics (0.1.3-1) ... 212s Setting up r-cran-iterators (1.0.14-1) ... 212s Setting up r-cran-digest (0.6.36-1) ... 212s Setting up r-cran-ape (5.8-1) ... 212s Setting up r-cran-yaml (2.3.8-2) ... 212s Setting up r-cran-evaluate (0.24.0-1) ... 212s Setting up r-cran-foreach (1.5.2-1) ... 212s Setting up r-cran-fansi (1.0.5-1) ... 212s Setting up r-cran-mass (7.3-61-1) ... 212s Setting up r-cran-glue (1.7.0-1) ... 212s Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2ubuntu1) ... 212s Setting up r-cran-cli (3.6.2-1) ... 212s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 212s Setting up r-cran-rprojroot (2.0.4-1) ... 212s Setting up gcc (4:14.1.0-2ubuntu1) ... 212s Setting up r-cran-askpass (1.2.0-1) ... 212s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 212s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 212s Setting up r-cran-utf8 (1.2.4-1) ... 212s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 212s Setting up r-cran-stringi (1.8.3-1) ... 212s Setting up r-cran-rex (1.2.1-1) ... 212s Setting up r-cran-cpp11 (0.4.7-1) ... 212s Setting up r-cran-matrix (1.7-0-3) ... 212s Setting up r-cran-mgcv (1.9-1-1) ... 212s Setting up g++ (4:14.1.0-2ubuntu1) ... 212s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 212s Setting up build-essential (12.10ubuntu1) ... 212s Setting up r-cran-tsp (1.2-4-1) ... 212s Setting up r-cran-vctrs (0.6.5-1) ... 212s Setting up r-bioc-graph (1.80.0-1) ... 212s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 212s Setting up r-cran-openssl (2.1.1+dfsg-2build2) ... 212s Setting up r-cran-stringr (1.5.1-1) ... 212s Setting up r-cran-callr (3.7.6-1) ... 212s Setting up r-cran-desc (1.4.3-1) ... 212s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 212s Setting up r-cran-igraph (2.0.3-1) ... 212s Setting up gfortran (4:14.1.0-2ubuntu1) ... 212s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 212s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 212s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 212s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 212s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 212s Setting up r-cran-httr (1.4.7+dfsg-1) ... 212s Setting up r-cran-covr (3.6.4+dfsg-1) ... 212s Setting up r-cran-purrr (1.0.2-1) ... 212s Setting up r-cran-vegan (2.6-6.1+dfsg-1) ... 212s Setting up r-cran-pkgbuild (1.4.4-1) ... 212s Setting up r-cran-seriation (1.5.5-1) ... 212s Setting up r-cran-dplyr (1.1.4-1) ... 212s Setting up r-cran-pkgload (1.4.0-1) ... 212s Setting up r-base-dev (4.4.1-1) ... 212s Setting up r-cran-rematch2 (2.1.2-2build1) ... 212s Setting up r-cran-waldo (0.5.2-1build1) ... 212s Setting up r-cran-tidyr (1.3.1-1) ... 212s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 212s Setting up r-cran-tidygraph (1.3.0-1) ... 212s Setting up r-cran-testthat (3.2.1.1-1) ... 212s Setting up autopkgtest-satdep (0) ... 212s Processing triggers for man-db (2.12.1-2) ... 214s Processing triggers for install-info (7.1-3build2) ... 214s Processing triggers for libc-bin (2.39-0ubuntu9) ... 219s (Reading database ... 86976 files and directories currently installed.) 219s Removing autopkgtest-satdep (0) ... 219s autopkgtest [16:11:48]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 219s autopkgtest [16:11:48]: test pkg-r-autopkgtest: [----------------------- 220s Test: Try to load the R library tidygraph 220s 220s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 220s Copyright (C) 2024 The R Foundation for Statistical Computing 220s Platform: x86_64-pc-linux-gnu 220s 220s R is free software and comes with ABSOLUTELY NO WARRANTY. 220s You are welcome to redistribute it under certain conditions. 220s Type 'license()' or 'licence()' for distribution details. 220s 220s R is a collaborative project with many contributors. 220s Type 'contributors()' for more information and 220s 'citation()' on how to cite R or R packages in publications. 220s 220s Type 'demo()' for some demos, 'help()' for on-line help, or 220s 'help.start()' for an HTML browser interface to help. 220s Type 'q()' to quit R. 220s 220s > library('tidygraph') 220s 220s Attaching package: ‘tidygraph’ 220s 220s > 220s > 220s The following object is masked from ‘package:stats’: 220s 220s filter 220s 220s Other tests are currently unsupported! 220s They will be progressively added. 221s autopkgtest [16:11:50]: test pkg-r-autopkgtest: -----------------------] 221s pkg-r-autopkgtest PASS 221s autopkgtest [16:11:50]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 221s autopkgtest [16:11:50]: @@@@@@@@@@@@@@@@@@@@ summary 221s run-unit-test FAIL non-zero exit status 1 221s pkg-r-autopkgtest PASS 232s nova [W] Skipping flock for amd64 232s Creating nova instance adt-oracular-amd64-r-cran-tidygraph-20240726-160809-juju-7f2275-prod-proposed-migration-environment-3-6bf66565-3fcb-490b-ae50-fee5a6c8e674 from image adt/ubuntu-oracular-amd64-server-20240726.img (UUID 6c5f29e9-79d7-45b1-9721-03e2205f6a0e)... 232s nova [W] Skipping flock for amd64 232s Creating nova instance adt-oracular-amd64-r-cran-tidygraph-20240726-160809-juju-7f2275-prod-proposed-migration-environment-3-6bf66565-3fcb-490b-ae50-fee5a6c8e674 from image adt/ubuntu-oracular-amd64-server-20240726.img (UUID 6c5f29e9-79d7-45b1-9721-03e2205f6a0e)...