6s autopkgtest [00:32:01]: starting date and time: 2024-07-11 00:32:01+0000 6s autopkgtest [00:32:01]: git checkout: fd3bed09 nova: allow more retries for quota issues 6s autopkgtest [00:32:01]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ro_rgkfa/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pandas --apt-upgrade q2-diversity-lib --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pandas/2.2.2+dfsg-4 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-17.secgroup --name adt-oracular-amd64-q2-diversity-lib-20240711-003155-juju-7f2275-prod-proposed-migration-environment-2-22367b8a-5f80-47cb-9a55-ca0c3cdacad9 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 114s autopkgtest [00:33:49]: testbed dpkg architecture: amd64 114s autopkgtest [00:33:49]: testbed apt version: 2.9.6 114s autopkgtest [00:33:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 114s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 114s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 114s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [55.3 kB] 114s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [336 kB] 114s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 114s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [93.3 kB] 114s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [122 kB] 114s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [2508 B] 114s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [34.9 kB] 114s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [6244 B] 114s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B] 114s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [367 kB] 114s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [230 kB] 114s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [8940 B] 114s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [7644 B] 114s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3052 B] 114s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [276 B] 115s Fetched 1404 kB in 0s (6347 kB/s) 115s Reading package lists... 117s Reading package lists... 117s Building dependency tree... 118s Reading state information... 118s Calculating upgrade... 118s The following package was automatically installed and is no longer required: 118s systemd-dev 118s Use 'sudo apt autoremove' to remove it. 118s The following packages will be upgraded: 118s curl libcurl3t64-gnutls libcurl4t64 libgcrypt20 libgnutls30t64 118s libnss-systemd libpam-systemd libsystemd-shared libsystemd0 libudev1 systemd 118s systemd-dev systemd-resolved systemd-sysv systemd-timesyncd udev 118s 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 118s Need to get 11.9 MB of archives. 118s After this operation, 2272 kB of additional disk space will be used. 118s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 libnss-systemd amd64 256-1ubuntu1 [164 kB] 118s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 systemd-dev all 256-1ubuntu1 [111 kB] 118s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 systemd-timesyncd amd64 256-1ubuntu1 [35.6 kB] 118s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 systemd-resolved amd64 256-1ubuntu1 [311 kB] 118s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 libsystemd-shared amd64 256-1ubuntu1 [2191 kB] 118s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libsystemd0 amd64 256-1ubuntu1 [442 kB] 118s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 systemd-sysv amd64 256-1ubuntu1 [11.8 kB] 118s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libpam-systemd amd64 256-1ubuntu1 [243 kB] 118s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 systemd amd64 256-1ubuntu1 [3652 kB] 118s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 udev amd64 256-1ubuntu1 [1963 kB] 118s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 libudev1 amd64 256-1ubuntu1 [193 kB] 118s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcrypt20 amd64 1.11.0-2 [630 kB] 118s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libgnutls30t64 amd64 3.8.6-2ubuntu1 [1005 kB] 118s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 curl amd64 8.8.0-3ubuntu3 [234 kB] 118s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libcurl4t64 amd64 8.8.0-3ubuntu3 [360 kB] 118s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libcurl3t64-gnutls amd64 8.8.0-3ubuntu3 [351 kB] 119s Fetched 11.9 MB in 0s (64.2 MB/s) 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74466 files and directories currently installed.) 119s Preparing to unpack .../0-libnss-systemd_256-1ubuntu1_amd64.deb ... 119s Unpacking libnss-systemd:amd64 (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../1-systemd-dev_256-1ubuntu1_all.deb ... 119s Unpacking systemd-dev (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../2-systemd-timesyncd_256-1ubuntu1_amd64.deb ... 119s Unpacking systemd-timesyncd (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../3-systemd-resolved_256-1ubuntu1_amd64.deb ... 119s Unpacking systemd-resolved (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../4-libsystemd-shared_256-1ubuntu1_amd64.deb ... 119s Unpacking libsystemd-shared:amd64 (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../5-libsystemd0_256-1ubuntu1_amd64.deb ... 119s Unpacking libsystemd0:amd64 (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Setting up libsystemd0:amd64 (256-1ubuntu1) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74468 files and directories currently installed.) 119s Preparing to unpack .../systemd-sysv_256-1ubuntu1_amd64.deb ... 119s Unpacking systemd-sysv (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../libpam-systemd_256-1ubuntu1_amd64.deb ... 119s Unpacking libpam-systemd:amd64 (256-1ubuntu1) over (255.4-1ubuntu8) ... 119s Preparing to unpack .../systemd_256-1ubuntu1_amd64.deb ... 119s Unpacking systemd (256-1ubuntu1) over (255.4-1ubuntu8) ... 120s Preparing to unpack .../udev_256-1ubuntu1_amd64.deb ... 120s Unpacking udev (256-1ubuntu1) over (255.4-1ubuntu8) ... 120s Preparing to unpack .../libudev1_256-1ubuntu1_amd64.deb ... 120s Unpacking libudev1:amd64 (256-1ubuntu1) over (255.4-1ubuntu8) ... 120s Setting up libudev1:amd64 (256-1ubuntu1) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74530 files and directories currently installed.) 120s Preparing to unpack .../libgcrypt20_1.11.0-2_amd64.deb ... 120s Unpacking libgcrypt20:amd64 (1.11.0-2) over (1.10.3-3) ... 120s Setting up libgcrypt20:amd64 (1.11.0-2) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74530 files and directories currently installed.) 120s Preparing to unpack .../libgnutls30t64_3.8.6-2ubuntu1_amd64.deb ... 120s Unpacking libgnutls30t64:amd64 (3.8.6-2ubuntu1) over (3.8.5-4ubuntu1) ... 120s Setting up libgnutls30t64:amd64 (3.8.6-2ubuntu1) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74530 files and directories currently installed.) 120s Preparing to unpack .../curl_8.8.0-3ubuntu3_amd64.deb ... 120s Unpacking curl (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 120s Preparing to unpack .../libcurl4t64_8.8.0-3ubuntu3_amd64.deb ... 120s Unpacking libcurl4t64:amd64 (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 120s Preparing to unpack .../libcurl3t64-gnutls_8.8.0-3ubuntu3_amd64.deb ... 120s Unpacking libcurl3t64-gnutls:amd64 (8.8.0-3ubuntu3) over (8.8.0-1ubuntu1) ... 120s Setting up libcurl4t64:amd64 (8.8.0-3ubuntu3) ... 120s Setting up libcurl3t64-gnutls:amd64 (8.8.0-3ubuntu3) ... 120s Setting up systemd-dev (256-1ubuntu1) ... 120s Setting up libsystemd-shared:amd64 (256-1ubuntu1) ... 120s Setting up curl (8.8.0-3ubuntu3) ... 120s Setting up systemd (256-1ubuntu1) ... 120s Installing new version of config file /etc/systemd/journald.conf ... 120s Installing new version of config file /etc/systemd/logind.conf ... 120s Installing new version of config file /etc/systemd/networkd.conf ... 120s Installing new version of config file /etc/systemd/sleep.conf ... 120s Installing new version of config file /etc/systemd/system.conf ... 120s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 120s Created symlink '/run/systemd/system/tmp.mount' → '/dev/null'. 120s /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. 121s Setting up systemd-timesyncd (256-1ubuntu1) ... 122s Setting up udev (256-1ubuntu1) ... 122s Setting up systemd-resolved (256-1ubuntu1) ... 122s Installing new version of config file /etc/systemd/resolved.conf ... 123s Setting up systemd-sysv (256-1ubuntu1) ... 123s Setting up libnss-systemd:amd64 (256-1ubuntu1) ... 123s Setting up libpam-systemd:amd64 (256-1ubuntu1) ... 123s Processing triggers for libc-bin (2.39-0ubuntu9) ... 123s Processing triggers for man-db (2.12.1-2) ... 124s Processing triggers for dbus (1.14.10-4ubuntu4) ... 124s Processing triggers for shared-mime-info (2.4-5) ... 124s Warning: program compiled against libxml 212 using older 209 125s Processing triggers for initramfs-tools (0.142ubuntu29) ... 125s update-initramfs: Generating /boot/initrd.img-6.8.0-31-generic 125s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 133s Reading package lists... 133s Building dependency tree... 133s Reading state information... 134s The following packages will be REMOVED: 134s systemd-dev* 134s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 134s After this operation, 760 kB disk space will be freed. 134s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74534 files and directories currently installed.) 134s Removing systemd-dev (256-1ubuntu1) ... 135s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 135s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 135s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 135s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 136s Reading package lists... 136s Reading package lists... 136s Building dependency tree... 136s Reading state information... 137s Calculating upgrade... 137s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 137s Reading package lists... 137s Building dependency tree... 137s Reading state information... 137s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 138s autopkgtest [00:34:13]: rebooting testbed after setup commands that affected boot 141s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 153s autopkgtest [00:34:28]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 154s autopkgtest [00:34:29]: @@@@@@@@@@@@@@@@@@@@ apt-source q2-diversity-lib 155s Get:1 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (dsc) [2283 B] 155s Get:2 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (tar) [331 kB] 155s Get:3 http://ftpmaster.internal/ubuntu oracular/universe q2-diversity-lib 2024.5.0-1ubuntu1 (diff) [9348 B] 155s gpgv: Signature made Wed Jul 10 13:06:22 2024 UTC 155s gpgv: using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9 155s gpgv: Can't check signature: No public key 155s dpkg-source: warning: cannot verify inline signature for ./q2-diversity-lib_2024.5.0-1ubuntu1.dsc: no acceptable signature found 155s autopkgtest [00:34:30]: testing package q2-diversity-lib version 2024.5.0-1ubuntu1 155s autopkgtest [00:34:30]: build not needed 155s autopkgtest [00:34:30]: test run-unit-test: preparing testbed 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 157s Starting pkgProblemResolver with broken count: 0 157s Starting 2 pkgProblemResolver with broken count: 0 157s Done 157s The following additional packages will be installed: 157s blt fontconfig fonts-glyphicons-halflings fonts-lyx javascript-common 157s jupyter-nbextension-jupyter-js-widgets libaec0 libblas3 libcairo2 libdatrie1 157s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 157s libhdf5-cpp-103-1t64 libhdf5-hl-100t64 libice6 libimagequant0 157s libjs-bootstrap libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen 157s libjs-jquery-metadata libjs-jquery-tablesorter 157s libjs-jquery-throttle-debounce libjs-jquery-ui libjs-popper.js liblapack3 157s liblapacke liblbfgsb0 liblcms2-2 liblzf1 libnorm1t64 libopenblas0 157s libopenblas0-pthread libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 157s libpangoft2-1.0-0 libpaper-utils libpaper1 libpgm-5.3-0t64 libpixman-1-0 157s libqhull-r8.0 libraqm0 libsm6 libsodium23 libssu0 libssw0 libsz2 libtcl8.6 157s libthai-data libthai0 libtk8.6 libtmglib3 libwebpdemux2 libwebpmux3 157s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 libxt6t64 157s libyajl2 libzmq5 node-fortawesome-fontawesome-free node-normalize.css 157s python-matplotlib-data python3-all python3-appdirs python3-asttokens 157s python3-bcrypt python3-bibtexparser python3-biom-format python3-brotli 157s python3-click python3-colorama python3-comm python3-contourpy 157s python3-coverage python3-cycler python3-dateutil python3-decorator 157s python3-dill python3-emperor python3-executing python3-filelock 157s python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-fonttools 157s python3-fs python3-globus-sdk python3-greenlet python3-h5py 157s python3-h5py-serial python3-hdmedians python3-ijson python3-iniconfig 157s python3-iow python3-ipython python3-ipywidgets python3-itsdangerous 157s python3-jedi python3-joblib python3-kiwisolver python3-lxml python3-lz4 157s python3-matplotlib python3-matplotlib-inline python3-mpmath python3-nacl 157s python3-natsort python3-networkx python3-numpy python3-packaging 157s python3-pandas python3-pandas-lib python3-paramiko python3-parsl 157s python3-parso python3-patsy python3-pexpect python3-pil python3-pil.imagetk 157s python3-platformdirs python3-pluggy python3-prompt-toolkit python3-psutil 157s python3-ptyprocess python3-public python3-pure-eval python3-py 157s python3-pytest python3-pytest-cov python3-scipy python3-seaborn 157s python3-setproctitle python3-skbio python3-sklearn python3-sklearn-lib 157s python3-sqlalchemy python3-stack-data python3-statsmodels 157s python3-statsmodels-lib python3-sympy python3-tblib python3-threadpoolctl 157s python3-tk python3-tomlkit python3-traitlets python3-typeguard 157s python3-typeshed python3-tzlocal python3-ufolib2 python3-unicodedata2 157s python3-unifrac python3-wcwidth python3-werkzeug python3-widgetsnbextension 157s python3-zmq q2-diversity-lib q2-emperor q2-feature-table q2-types 157s q2templates qiime r-base-core r-cran-cluster r-cran-lattice r-cran-mass 157s r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-permute r-cran-vegan 157s tk8.6-blt2.5 unicode-data unifrac-tools unzip x11-common xdg-utils zip 157s Suggested packages: 157s blt-demo apache2 | lighttpd | httpd libjs-jquery-ui-docs liblcms2-utils 157s tcl8.6 tk8.6 libjs-html5shiv python-biom-format-doc python-coverage-doc 157s python-cycler-doc python3-objgraph python3-dotenv python-flask-doc 157s python-flufl.lock-doc python-greenlet-dev python-greenlet-doc 157s python-h5py-doc python-ipython-doc python-ipywidgets-doc python-lxml-doc 157s cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 157s inkscape ipython3 librsvg2-common python3-cairocffi python3-gi-cairo 157s python3-gobject python3-pyqt5 python3-sip python3-tornado 157s texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 157s python-nacl-doc python-natsort-doc python3-gdal python3-pydot 157s python3-pygraphviz gcc gfortran python-numpy-doc python3-dev 157s python-pandas-doc python3-gssapi python3-invoke python-patsy-doc 157s python-pexpect-doc python-pil-doc python-public-doc subversion 157s python-scipy-doc python-skbio-doc python3-dap python-sklearn-doc 157s python-sqlalchemy-doc python3-fdb python3-pymssql python3-mysqldb 157s python3-psycopg2 python3-asyncpg python3-aiosqlite python-statsmodels-doc 157s texlive-fonts-extra python-sympy-doc tix python3-tk-dbg python-werkzeug-doc 157s python3-watchdog elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 157s r-cran-knitr r-cran-rmarkdown r-cran-bookdown r-cran-sessioninfo 157s Recommended packages: 157s jupyter-notebook node-jquery python3-asgiref python3-simplejson python3-bs4 157s python3-cssselect python3-html5lib python3-bottleneck python3-numexpr 157s python3-odf python3-openpyxl python3-tables python3-numba r-cran-plotly 157s python3-olefile g++ | c++-compiler python3-sqlalchemy-ext python3-cvxopt 157s isympy-common python3-pyinotify q2cli q2-cutadapt q2-metadata q2-demux 157s q2-quality-filter q2-feature-classifier r-recommended r-base-dev r-doc-html 157s r-cran-testthat r-cran-knitr r-cran-markdown libfile-mimeinfo-perl 157s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 157s The following NEW packages will be installed: 157s autopkgtest-satdep blt fontconfig fonts-glyphicons-halflings fonts-lyx 157s javascript-common jupyter-nbextension-jupyter-js-widgets libaec0 libblas3 157s libcairo2 libdatrie1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 157s libhdf5-103-1t64 libhdf5-cpp-103-1t64 libhdf5-hl-100t64 libice6 157s libimagequant0 libjs-bootstrap libjs-jquery libjs-jquery-hotkeys 157s libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter 157s libjs-jquery-throttle-debounce libjs-jquery-ui libjs-popper.js liblapack3 157s liblapacke liblbfgsb0 liblcms2-2 liblzf1 libnorm1t64 libopenblas0 157s libopenblas0-pthread libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 157s libpangoft2-1.0-0 libpaper-utils libpaper1 libpgm-5.3-0t64 libpixman-1-0 157s libqhull-r8.0 libraqm0 libsm6 libsodium23 libssu0 libssw0 libsz2 libtcl8.6 157s libthai-data libthai0 libtk8.6 libtmglib3 libwebpdemux2 libwebpmux3 157s libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxslt1.1 libxss1 libxt6t64 157s libyajl2 libzmq5 node-fortawesome-fontawesome-free node-normalize.css 157s python-matplotlib-data python3-all python3-appdirs python3-asttokens 157s python3-bcrypt python3-bibtexparser python3-biom-format python3-brotli 157s python3-click python3-colorama python3-comm python3-contourpy 157s python3-coverage python3-cycler python3-dateutil python3-decorator 157s python3-dill python3-emperor python3-executing python3-filelock 157s python3-flask python3-flask-sqlalchemy python3-flufl.lock python3-fonttools 157s python3-fs python3-globus-sdk python3-greenlet python3-h5py 157s python3-h5py-serial python3-hdmedians python3-ijson python3-iniconfig 157s python3-iow python3-ipython python3-ipywidgets python3-itsdangerous 157s python3-jedi python3-joblib python3-kiwisolver python3-lxml python3-lz4 157s python3-matplotlib python3-matplotlib-inline python3-mpmath python3-nacl 157s python3-natsort python3-networkx python3-numpy python3-packaging 157s python3-pandas python3-pandas-lib python3-paramiko python3-parsl 157s python3-parso python3-patsy python3-pexpect python3-pil python3-pil.imagetk 157s python3-platformdirs python3-pluggy python3-prompt-toolkit python3-psutil 157s python3-ptyprocess python3-public python3-pure-eval python3-py 157s python3-pytest python3-pytest-cov python3-scipy python3-seaborn 157s python3-setproctitle python3-skbio python3-sklearn python3-sklearn-lib 157s python3-sqlalchemy python3-stack-data python3-statsmodels 157s python3-statsmodels-lib python3-sympy python3-tblib python3-threadpoolctl 157s python3-tk python3-tomlkit python3-traitlets python3-typeguard 157s python3-typeshed python3-tzlocal python3-ufolib2 python3-unicodedata2 157s python3-unifrac python3-wcwidth python3-werkzeug python3-widgetsnbextension 157s python3-zmq q2-diversity-lib q2-emperor q2-feature-table q2-types 157s q2templates qiime r-base-core r-cran-cluster r-cran-lattice r-cran-mass 157s r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-permute r-cran-vegan 157s tk8.6-blt2.5 unicode-data unifrac-tools unzip x11-common xdg-utils zip 157s 0 upgraded, 186 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 166 MB/166 MB of archives. 157s After this operation, 705 MB of additional disk space will be used. 157s Get:1 /tmp/autopkgtest.nHW5X6/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [732 B] 157s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 157s Get:3 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] 157s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB] 157s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB] 157s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 157s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB] 157s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 157s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB] 157s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB] 157s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B] 157s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 fontconfig amd64 2.15.0-1.1ubuntu2 [180 kB] 157s Get:13 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 157s Get:14 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-lyx all 2.4.1-1 [171 kB] 157s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 javascript-common all 11+nmu1 [5936 B] 157s Get:16 http://ftpmaster.internal/ubuntu oracular/universe amd64 jupyter-nbextension-jupyter-js-widgets all 8.1.1-2 [5210 B] 157s Get:17 http://ftpmaster.internal/ubuntu oracular/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 157s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 157s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB] 157s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 157s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 157s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libcairo2 amd64 1.18.0-3build1 [566 kB] 157s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 157s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-1ubuntu1 [928 kB] 158s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libgomp1 amd64 14.1.0-1ubuntu1 [148 kB] 158s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 158s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 libharfbuzz0b amd64 8.3.0-2build2 [469 kB] 158s Get:28 http://ftpmaster.internal/ubuntu oracular/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 158s Get:29 http://ftpmaster.internal/ubuntu oracular/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.1ubuntu4 [1270 kB] 158s Get:30 http://ftpmaster.internal/ubuntu oracular/universe amd64 libhdf5-cpp-103-1t64 amd64 1.10.10+repack-3.1ubuntu4 [128 kB] 158s Get:31 http://ftpmaster.internal/ubuntu oracular/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.1ubuntu4 [56.0 kB] 158s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB] 158s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 158s Get:34 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 158s Get:35 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-metadata all 12-4 [6582 B] 158s Get:36 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB] 158s Get:37 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 158s Get:38 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 158s Get:39 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 158s Get:40 http://ftpmaster.internal/ubuntu oracular/universe amd64 libopenblas0-pthread amd64 0.3.27+ds-2 [7185 kB] 158s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 158s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 libtmglib3 amd64 3.12.0-3build1 [141 kB] 158s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapacke amd64 3.12.0-3build1 [412 kB] 158s Get:44 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 158s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB] 158s Get:46 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 158s Get:47 http://ftpmaster.internal/ubuntu oracular/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1build1 [154 kB] 158s Get:48 http://ftpmaster.internal/ubuntu oracular/universe amd64 libopenblas0 amd64 0.3.27+ds-2 [6218 B] 158s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 158s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 158s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 libpango-1.0-0 amd64 1.54.0+ds-1 [233 kB] 158s Get:52 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-1 [42.3 kB] 158s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-1 [28.7 kB] 158s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper1 amd64 1.1.29build1 [13.4 kB] 158s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 libpaper-utils amd64 1.1.29build1 [8650 B] 158s Get:56 http://ftpmaster.internal/ubuntu oracular/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build1 [167 kB] 158s Get:57 http://ftpmaster.internal/ubuntu oracular/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB] 158s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 libraqm0 amd64 0.10.1-1build1 [15.0 kB] 158s Get:59 http://ftpmaster.internal/ubuntu oracular/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB] 158s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 libsodium23 amd64 1.0.18-1build3 [161 kB] 158s Get:61 http://ftpmaster.internal/ubuntu oracular/universe amd64 libssu0 amd64 1.4-3build2 [163 kB] 158s Get:62 http://ftpmaster.internal/ubuntu oracular/universe amd64 libssw0 amd64 1.1-14build1 [22.1 kB] 158s Get:63 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB] 158s Get:64 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB] 158s Get:65 http://ftpmaster.internal/ubuntu oracular/main amd64 libxslt1.1 amd64 1.1.39-0exp1build1 [167 kB] 158s Get:66 http://ftpmaster.internal/ubuntu oracular/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 158s Get:67 http://ftpmaster.internal/ubuntu oracular/universe amd64 libzmq5 amd64 4.3.5-1build2 [260 kB] 158s Get:68 http://ftpmaster.internal/ubuntu oracular/universe amd64 node-fortawesome-fontawesome-free all 6.4.2+ds1-1 [1573 kB] 158s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB] 158s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 python-matplotlib-data all 3.6.3-2ubuntu1 [2937 kB] 158s Get:71 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-all amd64 3.12.3-0ubuntu1 [888 B] 158s Get:72 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB] 158s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-asttokens all 2.4.1-1 [20.9 kB] 158s Get:74 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-bibtexparser all 2.0.0b5+really1.4.1-1 [34.5 kB] 158s Get:75 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [4437 kB] 158s Get:76 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-h5py-serial amd64 3.10.0-1ubuntu3 [906 kB] 158s Get:77 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-h5py all 3.10.0-1ubuntu3 [7978 B] 158s Get:78 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-colorama all 0.4.6-4 [32.1 kB] 158s Get:79 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-click all 8.1.7-1 [79.1 kB] 158s Get:80 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB] 158s Get:81 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pandas-lib amd64 2.2.2+dfsg-4 [4444 kB] 158s Get:82 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pandas all 2.2.2+dfsg-4 [3111 kB] 158s Get:83 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 158s Get:84 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-scipy amd64 1.12.0-2 [16.5 MB] 158s Get:85 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-biom-format amd64 2.1.16-1 [141 kB] 158s Get:86 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-brotli amd64 1.1.0-2build2 [332 kB] 158s Get:87 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-traitlets all 5.5.0-2 [85.0 kB] 158s Get:88 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-comm all 0.2.1-1 [7016 B] 158s Get:89 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-contourpy amd64 1.0.7-3 [181 kB] 158s Get:90 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-coverage amd64 7.4.4+dfsg1-0ubuntu2 [147 kB] 158s Get:91 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-cycler all 0.12.1-1 [9716 B] 158s Get:92 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-dill all 0.3.8-1 [83.0 kB] 158s Get:93 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-natsort all 8.0.2-2 [33.8 kB] 158s Get:94 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-hdmedians amd64 0.14.2-5.1build1 [124 kB] 158s Get:95 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-skbio amd64 0.6.1-2 [1333 kB] 158s Get:96 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-emperor all 1.0.3+ds-9.1 [133 kB] 158s Get:97 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-executing all 2.0.1-0.1 [23.3 kB] 158s Get:98 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-filelock all 3.15.4-1 [12.8 kB] 158s Get:99 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-itsdangerous all 2.2.0-1 [15.2 kB] 158s Get:100 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-werkzeug all 3.0.3-1 [170 kB] 158s Get:101 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-flask all 3.0.3-1ubuntu1 [83.2 kB] 158s Get:102 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-greenlet amd64 3.0.3-0ubuntu5 [154 kB] 158s Get:103 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-sqlalchemy all 1.4.50+ds1-1build1 [1020 kB] 158s Get:104 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-flask-sqlalchemy all 3.0.3-1 [30.9 kB] 158s Get:105 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-psutil amd64 5.9.8-2build2 [195 kB] 158s Get:106 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-public all 4.1.0-1 [7052 B] 158s Get:107 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-flufl.lock all 8.1.0-1 [12.4 kB] 158s Get:108 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB] 158s Get:109 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-mpmath all 1.3.0-1 [425 kB] 158s Get:110 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-sympy all 1.12-8 [3966 kB] 158s Get:111 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-fs all 2.4.16-4 [91.3 kB] 158s Get:112 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-lxml amd64 5.2.1-1 [1243 kB] 158s Get:113 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build4 [26.2 kB] 158s Get:114 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-unicodedata2 amd64 15.1.0+ds-1build1 [362 kB] 158s Get:115 http://ftpmaster.internal/ubuntu oracular/universe amd64 unicode-data all 15.1.0-1 [8878 kB] 158s Get:116 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-fonttools amd64 4.46.0-1build2 [1436 kB] 158s Get:117 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-globus-sdk all 3.41.0-1 [225 kB] 158s Get:118 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 158s Get:119 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iow amd64 1.0.6-5 [387 kB] 158s Get:120 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-parso all 0.8.3-1 [67.2 kB] 158s Get:121 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-typeshed all 0.0~git20231111.6764465-3 [1274 kB] 158s Get:122 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-jedi all 0.19.1+ds1-1 [693 kB] 158s Get:123 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-matplotlib-inline all 0.1.6-2 [8784 B] 158s Get:124 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-ptyprocess all 0.7.0-5 [15.1 kB] 158s Get:125 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-pexpect all 4.9-2 [48.1 kB] 158s Get:126 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-wcwidth all 0.2.5+dfsg1-1.1ubuntu1 [22.5 kB] 158s Get:127 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-prompt-toolkit all 3.0.47-1 [256 kB] 158s Get:128 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pure-eval all 0.2.2-2 [11.1 kB] 158s Get:129 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-stack-data all 0.6.3-1 [22.0 kB] 158s Get:130 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-ipython all 8.20.0-1ubuntu1 [561 kB] 159s Get:131 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-widgetsnbextension all 8.1.1-2 [50.3 kB] 159s Get:132 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-ipywidgets all 8.1.1-2 [86.6 kB] 159s Get:133 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-joblib all 1.3.2-2 [208 kB] 159s Get:134 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-kiwisolver amd64 1.4.5-1 [51.0 kB] 159s Get:135 http://ftpmaster.internal/ubuntu oracular/main amd64 libopenjp2-7 amd64 2.5.0-2build3 [173 kB] 159s Get:136 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-pil amd64 10.3.0-2 [457 kB] 159s Get:137 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-tk amd64 3.12.3-0ubuntu1 [102 kB] 159s Get:138 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pil.imagetk amd64 10.3.0-2 [9224 B] 159s Get:139 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-packaging all 24.0-1 [41.1 kB] 159s Get:140 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-matplotlib amd64 3.6.3-2ubuntu1 [6080 kB] 159s Get:141 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-nacl amd64 1.5.0-4build1 [57.9 kB] 159s Get:142 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 159s Get:143 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-bcrypt amd64 4.1.2-1 [229 kB] 159s Get:144 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-paramiko all 3.4.0-1ubuntu1 [145 kB] 159s Get:145 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-setproctitle amd64 1.3.3-1build2 [19.0 kB] 159s Get:146 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-tblib all 3.0.0-5 [12.9 kB] 159s Get:147 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-typeguard all 4.1.5-1 [32.7 kB] 159s Get:148 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-py all 1.11.0-2 [72.7 kB] 159s Get:149 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-zmq amd64 24.0.1-5build1 [286 kB] 159s Get:150 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-parsl all 2024.05.27+ds-1 [274 kB] 159s Get:151 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-patsy all 0.5.6-1 [181 kB] 159s Get:152 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-platformdirs all 4.2.1-1 [16.3 kB] 159s Get:153 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 159s Get:154 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pytest all 7.4.4-1 [305 kB] 159s Get:155 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 159s Get:156 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pytest-cov all 5.0.0-1 [21.3 kB] 159s Get:157 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-seaborn all 0.13.2-4 [225 kB] 159s Get:158 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-threadpoolctl all 3.1.0-1 [21.3 kB] 159s Get:159 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-sklearn-lib amd64 1.4.2+dfsg-3 [3786 kB] 159s Get:160 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-sklearn all 1.4.2+dfsg-3 [2257 kB] 159s Get:161 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-statsmodels-lib amd64 0.14.2+dfsg-1 [1597 kB] 159s Get:162 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-statsmodels all 0.14.2+dfsg-1 [5014 kB] 159s Get:163 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-tomlkit all 0.12.5-1 [37.7 kB] 159s Get:164 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-tzlocal all 5.2-1.1 [20.5 kB] 159s Get:165 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-unifrac amd64 1.3-3 [153 kB] 159s Get:166 http://ftpmaster.internal/ubuntu oracular/universe amd64 qiime all 2024.5.0-1ubuntu1 [312 kB] 159s Get:167 http://ftpmaster.internal/ubuntu oracular/universe amd64 q2templates all 2024.5.0+ds-1 [12.0 kB] 159s Get:168 http://ftpmaster.internal/ubuntu oracular/main amd64 libyajl2 amd64 2.1.0-5build1 [20.2 kB] 159s Get:169 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-ijson amd64 3.3.0-1 [36.7 kB] 159s Get:170 http://ftpmaster.internal/ubuntu oracular/universe amd64 q2-types all 2024.5.0-1ubuntu1 [5755 kB] 159s Get:171 http://ftpmaster.internal/ubuntu oracular/universe amd64 q2-emperor all 2024.5.0-2 [12.9 kB] 159s Get:172 http://ftpmaster.internal/ubuntu oracular/universe amd64 q2-feature-table all 2024.5.0+dfsg-1ubuntu1 [347 kB] 159s Get:173 http://ftpmaster.internal/ubuntu oracular/main amd64 zip amd64 3.0-13build1 [175 kB] 159s Get:174 http://ftpmaster.internal/ubuntu oracular/main amd64 unzip amd64 6.0-28ubuntu5 [180 kB] 159s Get:175 http://ftpmaster.internal/ubuntu oracular/main amd64 xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 159s Get:176 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-base-core amd64 4.4.1-1 [28.5 MB] 159s Get:177 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-permute all 0.9-7-1 [228 kB] 159s Get:178 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB] 159s Get:179 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mass amd64 7.3-61-1 [1109 kB] 159s Get:180 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-cluster amd64 2.1.6-1build1 [553 kB] 159s Get:181 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-nlme amd64 3.1.165-1 [2309 kB] 160s Get:182 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-matrix amd64 1.7-0-3 [4185 kB] 160s Get:183 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB] 160s Get:184 http://ftpmaster.internal/ubuntu oracular/universe amd64 r-cran-vegan amd64 2.6-6.1+dfsg-1 [3123 kB] 160s Get:185 http://ftpmaster.internal/ubuntu oracular/universe amd64 unifrac-tools amd64 1.4-3build2 [1719 kB] 160s Get:186 http://ftpmaster.internal/ubuntu oracular/universe amd64 q2-diversity-lib all 2024.5.0-1ubuntu1 [69.9 kB] 160s Preconfiguring packages ... 160s Fetched 166 MB in 2s (69.3 MB/s) 160s Selecting previously unselected package libjs-jquery. 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74487 files and directories currently installed.) 161s Preparing to unpack .../000-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 161s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 161s Selecting previously unselected package libjs-jquery-hotkeys. 161s Preparing to unpack .../001-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... 161s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 161s Selecting previously unselected package libtcl8.6:amd64. 161s Preparing to unpack .../002-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ... 161s Unpacking libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 161s Selecting previously unselected package libxrender1:amd64. 161s Preparing to unpack .../003-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ... 161s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ... 161s Selecting previously unselected package libxft2:amd64. 161s Preparing to unpack .../004-libxft2_2.3.6-1build1_amd64.deb ... 161s Unpacking libxft2:amd64 (2.3.6-1build1) ... 161s Selecting previously unselected package x11-common. 161s Preparing to unpack .../005-x11-common_1%3a7.7+23ubuntu3_all.deb ... 161s Unpacking x11-common (1:7.7+23ubuntu3) ... 161s Selecting previously unselected package libxss1:amd64. 161s Preparing to unpack .../006-libxss1_1%3a1.2.3-1build3_amd64.deb ... 161s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 161s Selecting previously unselected package libtk8.6:amd64. 161s Preparing to unpack .../007-libtk8.6_8.6.14-1build1_amd64.deb ... 161s Unpacking libtk8.6:amd64 (8.6.14-1build1) ... 161s Selecting previously unselected package tk8.6-blt2.5. 161s Preparing to unpack .../008-tk8.6-blt2.5_2.5.3+dfsg-7build1_amd64.deb ... 161s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 161s Selecting previously unselected package blt. 161s Preparing to unpack .../009-blt_2.5.3+dfsg-7build1_amd64.deb ... 161s Unpacking blt (2.5.3+dfsg-7build1) ... 161s Selecting previously unselected package fontconfig. 161s Preparing to unpack .../010-fontconfig_2.15.0-1.1ubuntu2_amd64.deb ... 161s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 161s Selecting previously unselected package fonts-glyphicons-halflings. 161s Preparing to unpack .../011-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 161s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 161s Selecting previously unselected package fonts-lyx. 161s Preparing to unpack .../012-fonts-lyx_2.4.1-1_all.deb ... 161s Unpacking fonts-lyx (2.4.1-1) ... 161s Selecting previously unselected package javascript-common. 161s Preparing to unpack .../013-javascript-common_11+nmu1_all.deb ... 161s Unpacking javascript-common (11+nmu1) ... 161s Selecting previously unselected package jupyter-nbextension-jupyter-js-widgets. 161s Preparing to unpack .../014-jupyter-nbextension-jupyter-js-widgets_8.1.1-2_all.deb ... 161s Unpacking jupyter-nbextension-jupyter-js-widgets (8.1.1-2) ... 161s Selecting previously unselected package libaec0:amd64. 161s Preparing to unpack .../015-libaec0_1.1.3-1_amd64.deb ... 161s Unpacking libaec0:amd64 (1.1.3-1) ... 161s Selecting previously unselected package libblas3:amd64. 161s Preparing to unpack .../016-libblas3_3.12.0-3build1_amd64.deb ... 161s Unpacking libblas3:amd64 (3.12.0-3build1) ... 161s Selecting previously unselected package libpixman-1-0:amd64. 161s Preparing to unpack .../017-libpixman-1-0_0.42.2-1build1_amd64.deb ... 161s Unpacking libpixman-1-0:amd64 (0.42.2-1build1) ... 161s Selecting previously unselected package libxcb-render0:amd64. 161s Preparing to unpack .../018-libxcb-render0_1.17.0-2_amd64.deb ... 161s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 161s Selecting previously unselected package libxcb-shm0:amd64. 161s Preparing to unpack .../019-libxcb-shm0_1.17.0-2_amd64.deb ... 161s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 161s Selecting previously unselected package libcairo2:amd64. 161s Preparing to unpack .../020-libcairo2_1.18.0-3build1_amd64.deb ... 161s Unpacking libcairo2:amd64 (1.18.0-3build1) ... 161s Selecting previously unselected package libdatrie1:amd64. 161s Preparing to unpack .../021-libdatrie1_0.2.13-3build1_amd64.deb ... 161s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 161s Selecting previously unselected package libgfortran5:amd64. 161s Preparing to unpack .../022-libgfortran5_14.1.0-1ubuntu1_amd64.deb ... 161s Unpacking libgfortran5:amd64 (14.1.0-1ubuntu1) ... 161s Selecting previously unselected package libgomp1:amd64. 161s Preparing to unpack .../023-libgomp1_14.1.0-1ubuntu1_amd64.deb ... 161s Unpacking libgomp1:amd64 (14.1.0-1ubuntu1) ... 161s Selecting previously unselected package libgraphite2-3:amd64. 161s Preparing to unpack .../024-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 161s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 161s Selecting previously unselected package libharfbuzz0b:amd64. 161s Preparing to unpack .../025-libharfbuzz0b_8.3.0-2build2_amd64.deb ... 161s Unpacking libharfbuzz0b:amd64 (8.3.0-2build2) ... 161s Selecting previously unselected package libsz2:amd64. 161s Preparing to unpack .../026-libsz2_1.1.3-1_amd64.deb ... 161s Unpacking libsz2:amd64 (1.1.3-1) ... 161s Selecting previously unselected package libhdf5-103-1t64:amd64. 161s Preparing to unpack .../027-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu4_amd64.deb ... 161s Unpacking libhdf5-103-1t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 161s Selecting previously unselected package libhdf5-cpp-103-1t64:amd64. 161s Preparing to unpack .../028-libhdf5-cpp-103-1t64_1.10.10+repack-3.1ubuntu4_amd64.deb ... 161s Unpacking libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 161s Selecting previously unselected package libhdf5-hl-100t64:amd64. 161s Preparing to unpack .../029-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu4_amd64.deb ... 161s Unpacking libhdf5-hl-100t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 161s Selecting previously unselected package libice6:amd64. 161s Preparing to unpack .../030-libice6_2%3a1.0.10-1build3_amd64.deb ... 161s Unpacking libice6:amd64 (2:1.0.10-1build3) ... 161s Selecting previously unselected package libimagequant0:amd64. 161s Preparing to unpack .../031-libimagequant0_2.18.0-1build1_amd64.deb ... 161s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 161s Selecting previously unselected package libjs-bootstrap. 161s Preparing to unpack .../032-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 161s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 161s Selecting previously unselected package libjs-jquery-metadata. 161s Preparing to unpack .../033-libjs-jquery-metadata_12-4_all.deb ... 161s Unpacking libjs-jquery-metadata (12-4) ... 162s Selecting previously unselected package libjs-jquery-tablesorter. 162s Preparing to unpack .../034-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-3_all.deb ... 162s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... 162s Selecting previously unselected package libjs-jquery-throttle-debounce. 162s Preparing to unpack .../035-libjs-jquery-throttle-debounce_1.1+dfsg.1-2_all.deb ... 162s Unpacking libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 162s Selecting previously unselected package libjs-jquery-ui. 162s Preparing to unpack .../036-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 162s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 162s Selecting previously unselected package libjs-popper.js. 162s Preparing to unpack .../037-libjs-popper.js_1.16.1+ds-6_all.deb ... 162s Unpacking libjs-popper.js (1.16.1+ds-6) ... 162s Selecting previously unselected package libopenblas0-pthread:amd64. 162s Preparing to unpack .../038-libopenblas0-pthread_0.3.27+ds-2_amd64.deb ... 162s Unpacking libopenblas0-pthread:amd64 (0.3.27+ds-2) ... 162s Selecting previously unselected package liblapack3:amd64. 162s Preparing to unpack .../039-liblapack3_3.12.0-3build1_amd64.deb ... 162s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 162s Selecting previously unselected package libtmglib3:amd64. 162s Preparing to unpack .../040-libtmglib3_3.12.0-3build1_amd64.deb ... 162s Unpacking libtmglib3:amd64 (3.12.0-3build1) ... 162s Selecting previously unselected package liblapacke:amd64. 162s Preparing to unpack .../041-liblapacke_3.12.0-3build1_amd64.deb ... 162s Unpacking liblapacke:amd64 (3.12.0-3build1) ... 162s Selecting previously unselected package liblbfgsb0:amd64. 162s Preparing to unpack .../042-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 162s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 162s Selecting previously unselected package liblcms2-2:amd64. 162s Preparing to unpack .../043-liblcms2-2_2.14-2build1_amd64.deb ... 162s Unpacking liblcms2-2:amd64 (2.14-2build1) ... 162s Selecting previously unselected package liblzf1:amd64. 162s Preparing to unpack .../044-liblzf1_3.6-4_amd64.deb ... 162s Unpacking liblzf1:amd64 (3.6-4) ... 162s Selecting previously unselected package libnorm1t64:amd64. 162s Preparing to unpack .../045-libnorm1t64_1.5.9+dfsg-3.1build1_amd64.deb ... 162s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-3.1build1) ... 162s Selecting previously unselected package libopenblas0:amd64. 162s Preparing to unpack .../046-libopenblas0_0.3.27+ds-2_amd64.deb ... 162s Unpacking libopenblas0:amd64 (0.3.27+ds-2) ... 162s Selecting previously unselected package libthai-data. 162s Preparing to unpack .../047-libthai-data_0.1.29-2build1_all.deb ... 162s Unpacking libthai-data (0.1.29-2build1) ... 162s Selecting previously unselected package libthai0:amd64. 162s Preparing to unpack .../048-libthai0_0.1.29-2build1_amd64.deb ... 162s Unpacking libthai0:amd64 (0.1.29-2build1) ... 162s Selecting previously unselected package libpango-1.0-0:amd64. 162s Preparing to unpack .../049-libpango-1.0-0_1.54.0+ds-1_amd64.deb ... 162s Unpacking libpango-1.0-0:amd64 (1.54.0+ds-1) ... 162s Selecting previously unselected package libpangoft2-1.0-0:amd64. 162s Preparing to unpack .../050-libpangoft2-1.0-0_1.54.0+ds-1_amd64.deb ... 162s Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 162s Selecting previously unselected package libpangocairo-1.0-0:amd64. 162s Preparing to unpack .../051-libpangocairo-1.0-0_1.54.0+ds-1_amd64.deb ... 162s Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 162s Selecting previously unselected package libpaper1:amd64. 162s Preparing to unpack .../052-libpaper1_1.1.29build1_amd64.deb ... 162s Unpacking libpaper1:amd64 (1.1.29build1) ... 162s Selecting previously unselected package libpaper-utils. 162s Preparing to unpack .../053-libpaper-utils_1.1.29build1_amd64.deb ... 162s Unpacking libpaper-utils (1.1.29build1) ... 162s Selecting previously unselected package libpgm-5.3-0t64:amd64. 162s Preparing to unpack .../054-libpgm-5.3-0t64_5.3.128~dfsg-2.1build1_amd64.deb ... 162s Unpacking libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build1) ... 162s Selecting previously unselected package libqhull-r8.0:amd64. 162s Preparing to unpack .../055-libqhull-r8.0_2020.2-6build1_amd64.deb ... 162s Unpacking libqhull-r8.0:amd64 (2020.2-6build1) ... 162s Selecting previously unselected package libraqm0:amd64. 162s Preparing to unpack .../056-libraqm0_0.10.1-1build1_amd64.deb ... 162s Unpacking libraqm0:amd64 (0.10.1-1build1) ... 162s Selecting previously unselected package libsm6:amd64. 162s Preparing to unpack .../057-libsm6_2%3a1.2.3-1build3_amd64.deb ... 162s Unpacking libsm6:amd64 (2:1.2.3-1build3) ... 162s Selecting previously unselected package libsodium23:amd64. 162s Preparing to unpack .../058-libsodium23_1.0.18-1build3_amd64.deb ... 162s Unpacking libsodium23:amd64 (1.0.18-1build3) ... 162s Selecting previously unselected package libssu0:amd64. 162s Preparing to unpack .../059-libssu0_1.4-3build2_amd64.deb ... 162s Unpacking libssu0:amd64 (1.4-3build2) ... 162s Selecting previously unselected package libssw0:amd64. 163s Preparing to unpack .../060-libssw0_1.1-14build1_amd64.deb ... 163s Unpacking libssw0:amd64 (1.1-14build1) ... 163s Selecting previously unselected package libwebpdemux2:amd64. 163s Preparing to unpack .../061-libwebpdemux2_1.4.0-0.1_amd64.deb ... 163s Unpacking libwebpdemux2:amd64 (1.4.0-0.1) ... 163s Selecting previously unselected package libwebpmux3:amd64. 163s Preparing to unpack .../062-libwebpmux3_1.4.0-0.1_amd64.deb ... 163s Unpacking libwebpmux3:amd64 (1.4.0-0.1) ... 163s Selecting previously unselected package libxslt1.1:amd64. 163s Preparing to unpack .../063-libxslt1.1_1.1.39-0exp1build1_amd64.deb ... 163s Unpacking libxslt1.1:amd64 (1.1.39-0exp1build1) ... 163s Selecting previously unselected package libxt6t64:amd64. 163s Preparing to unpack .../064-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 163s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 163s Selecting previously unselected package libzmq5:amd64. 163s Preparing to unpack .../065-libzmq5_4.3.5-1build2_amd64.deb ... 163s Unpacking libzmq5:amd64 (4.3.5-1build2) ... 163s Selecting previously unselected package node-fortawesome-fontawesome-free. 163s Preparing to unpack .../066-node-fortawesome-fontawesome-free_6.4.2+ds1-1_all.deb ... 163s Unpacking node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 163s Selecting previously unselected package node-normalize.css. 163s Preparing to unpack .../067-node-normalize.css_8.0.1-5_all.deb ... 163s Unpacking node-normalize.css (8.0.1-5) ... 163s Selecting previously unselected package python-matplotlib-data. 163s Preparing to unpack .../068-python-matplotlib-data_3.6.3-2ubuntu1_all.deb ... 163s Unpacking python-matplotlib-data (3.6.3-2ubuntu1) ... 163s Selecting previously unselected package python3-all. 163s Preparing to unpack .../069-python3-all_3.12.3-0ubuntu1_amd64.deb ... 163s Unpacking python3-all (3.12.3-0ubuntu1) ... 163s Selecting previously unselected package python3-appdirs. 163s Preparing to unpack .../070-python3-appdirs_1.4.4-4_all.deb ... 163s Unpacking python3-appdirs (1.4.4-4) ... 163s Selecting previously unselected package python3-asttokens. 163s Preparing to unpack .../071-python3-asttokens_2.4.1-1_all.deb ... 163s Unpacking python3-asttokens (2.4.1-1) ... 163s Selecting previously unselected package python3-bibtexparser. 163s Preparing to unpack .../072-python3-bibtexparser_2.0.0b5+really1.4.1-1_all.deb ... 163s Unpacking python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 163s Selecting previously unselected package python3-numpy. 163s Preparing to unpack .../073-python3-numpy_1%3a1.26.4+ds-10_amd64.deb ... 163s Unpacking python3-numpy (1:1.26.4+ds-10) ... 163s Selecting previously unselected package python3-h5py-serial. 163s Preparing to unpack .../074-python3-h5py-serial_3.10.0-1ubuntu3_amd64.deb ... 163s Unpacking python3-h5py-serial (3.10.0-1ubuntu3) ... 163s Selecting previously unselected package python3-h5py. 163s Preparing to unpack .../075-python3-h5py_3.10.0-1ubuntu3_all.deb ... 163s Unpacking python3-h5py (3.10.0-1ubuntu3) ... 164s Selecting previously unselected package python3-colorama. 164s Preparing to unpack .../076-python3-colorama_0.4.6-4_all.deb ... 164s Unpacking python3-colorama (0.4.6-4) ... 164s Selecting previously unselected package python3-click. 164s Preparing to unpack .../077-python3-click_8.1.7-1_all.deb ... 164s Unpacking python3-click (8.1.7-1) ... 164s Selecting previously unselected package python3-dateutil. 164s Preparing to unpack .../078-python3-dateutil_2.9.0-2_all.deb ... 164s Unpacking python3-dateutil (2.9.0-2) ... 164s Selecting previously unselected package python3-pandas-lib:amd64. 164s Preparing to unpack .../079-python3-pandas-lib_2.2.2+dfsg-4_amd64.deb ... 164s Unpacking python3-pandas-lib:amd64 (2.2.2+dfsg-4) ... 164s Selecting previously unselected package python3-pandas. 164s Preparing to unpack .../080-python3-pandas_2.2.2+dfsg-4_all.deb ... 164s Unpacking python3-pandas (2.2.2+dfsg-4) ... 164s Selecting previously unselected package python3-decorator. 164s Preparing to unpack .../081-python3-decorator_5.1.1-5_all.deb ... 164s Unpacking python3-decorator (5.1.1-5) ... 164s Selecting previously unselected package python3-scipy. 164s Preparing to unpack .../082-python3-scipy_1.12.0-2_amd64.deb ... 164s Unpacking python3-scipy (1.12.0-2) ... 164s Selecting previously unselected package python3-biom-format. 164s Preparing to unpack .../083-python3-biom-format_2.1.16-1_amd64.deb ... 164s Unpacking python3-biom-format (2.1.16-1) ... 165s Selecting previously unselected package python3-brotli. 165s Preparing to unpack .../084-python3-brotli_1.1.0-2build2_amd64.deb ... 165s Unpacking python3-brotli (1.1.0-2build2) ... 165s Selecting previously unselected package python3-traitlets. 165s Preparing to unpack .../085-python3-traitlets_5.5.0-2_all.deb ... 165s Unpacking python3-traitlets (5.5.0-2) ... 165s Selecting previously unselected package python3-comm. 165s Preparing to unpack .../086-python3-comm_0.2.1-1_all.deb ... 165s Unpacking python3-comm (0.2.1-1) ... 165s Selecting previously unselected package python3-contourpy. 165s Preparing to unpack .../087-python3-contourpy_1.0.7-3_amd64.deb ... 165s Unpacking python3-contourpy (1.0.7-3) ... 165s Selecting previously unselected package python3-coverage. 165s Preparing to unpack .../088-python3-coverage_7.4.4+dfsg1-0ubuntu2_amd64.deb ... 165s Unpacking python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 165s Selecting previously unselected package python3-cycler. 165s Preparing to unpack .../089-python3-cycler_0.12.1-1_all.deb ... 165s Unpacking python3-cycler (0.12.1-1) ... 165s Selecting previously unselected package python3-dill. 165s Preparing to unpack .../090-python3-dill_0.3.8-1_all.deb ... 165s Unpacking python3-dill (0.3.8-1) ... 165s Selecting previously unselected package python3-natsort. 165s Preparing to unpack .../091-python3-natsort_8.0.2-2_all.deb ... 165s Unpacking python3-natsort (8.0.2-2) ... 165s Selecting previously unselected package python3-hdmedians. 165s Preparing to unpack .../092-python3-hdmedians_0.14.2-5.1build1_amd64.deb ... 165s Unpacking python3-hdmedians (0.14.2-5.1build1) ... 165s Selecting previously unselected package python3-skbio. 165s Preparing to unpack .../093-python3-skbio_0.6.1-2_amd64.deb ... 165s Unpacking python3-skbio (0.6.1-2) ... 165s Selecting previously unselected package python3-emperor. 165s Preparing to unpack .../094-python3-emperor_1.0.3+ds-9.1_all.deb ... 165s Unpacking python3-emperor (1.0.3+ds-9.1) ... 165s Selecting previously unselected package python3-executing. 165s Preparing to unpack .../095-python3-executing_2.0.1-0.1_all.deb ... 165s Unpacking python3-executing (2.0.1-0.1) ... 165s Selecting previously unselected package python3-filelock. 165s Preparing to unpack .../096-python3-filelock_3.15.4-1_all.deb ... 165s Unpacking python3-filelock (3.15.4-1) ... 165s Selecting previously unselected package python3-itsdangerous. 165s Preparing to unpack .../097-python3-itsdangerous_2.2.0-1_all.deb ... 165s Unpacking python3-itsdangerous (2.2.0-1) ... 165s Selecting previously unselected package python3-werkzeug. 165s Preparing to unpack .../098-python3-werkzeug_3.0.3-1_all.deb ... 165s Unpacking python3-werkzeug (3.0.3-1) ... 165s Selecting previously unselected package python3-flask. 165s Preparing to unpack .../099-python3-flask_3.0.3-1ubuntu1_all.deb ... 165s Unpacking python3-flask (3.0.3-1ubuntu1) ... 165s Selecting previously unselected package python3-greenlet. 165s Preparing to unpack .../100-python3-greenlet_3.0.3-0ubuntu5_amd64.deb ... 165s Unpacking python3-greenlet (3.0.3-0ubuntu5) ... 165s Selecting previously unselected package python3-sqlalchemy. 165s Preparing to unpack .../101-python3-sqlalchemy_1.4.50+ds1-1build1_all.deb ... 165s Unpacking python3-sqlalchemy (1.4.50+ds1-1build1) ... 165s Selecting previously unselected package python3-flask-sqlalchemy. 165s Preparing to unpack .../102-python3-flask-sqlalchemy_3.0.3-1_all.deb ... 165s Unpacking python3-flask-sqlalchemy (3.0.3-1) ... 165s Selecting previously unselected package python3-psutil. 165s Preparing to unpack .../103-python3-psutil_5.9.8-2build2_amd64.deb ... 165s Unpacking python3-psutil (5.9.8-2build2) ... 165s Selecting previously unselected package python3-public. 165s Preparing to unpack .../104-python3-public_4.1.0-1_all.deb ... 165s Unpacking python3-public (4.1.0-1) ... 165s Selecting previously unselected package python3-flufl.lock. 165s Preparing to unpack .../105-python3-flufl.lock_8.1.0-1_all.deb ... 165s Unpacking python3-flufl.lock (8.1.0-1) ... 165s Selecting previously unselected package python3-ufolib2. 165s Preparing to unpack .../106-python3-ufolib2_0.16.0+dfsg1-1_all.deb ... 165s Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ... 165s Selecting previously unselected package python3-mpmath. 165s Preparing to unpack .../107-python3-mpmath_1.3.0-1_all.deb ... 165s Unpacking python3-mpmath (1.3.0-1) ... 165s Selecting previously unselected package python3-sympy. 165s Preparing to unpack .../108-python3-sympy_1.12-8_all.deb ... 165s Unpacking python3-sympy (1.12-8) ... 166s Selecting previously unselected package python3-fs. 166s Preparing to unpack .../109-python3-fs_2.4.16-4_all.deb ... 166s Unpacking python3-fs (2.4.16-4) ... 166s Selecting previously unselected package python3-lxml:amd64. 166s Preparing to unpack .../110-python3-lxml_5.2.1-1_amd64.deb ... 166s Unpacking python3-lxml:amd64 (5.2.1-1) ... 166s Selecting previously unselected package python3-lz4. 166s Preparing to unpack .../111-python3-lz4_4.0.2+dfsg-1build4_amd64.deb ... 166s Unpacking python3-lz4 (4.0.2+dfsg-1build4) ... 166s Selecting previously unselected package python3-unicodedata2. 166s Preparing to unpack .../112-python3-unicodedata2_15.1.0+ds-1build1_amd64.deb ... 166s Unpacking python3-unicodedata2 (15.1.0+ds-1build1) ... 166s Selecting previously unselected package unicode-data. 166s Preparing to unpack .../113-unicode-data_15.1.0-1_all.deb ... 166s Unpacking unicode-data (15.1.0-1) ... 166s Selecting previously unselected package python3-fonttools. 166s Preparing to unpack .../114-python3-fonttools_4.46.0-1build2_amd64.deb ... 166s Unpacking python3-fonttools (4.46.0-1build2) ... 166s Selecting previously unselected package python3-globus-sdk. 166s Preparing to unpack .../115-python3-globus-sdk_3.41.0-1_all.deb ... 166s Unpacking python3-globus-sdk (3.41.0-1) ... 166s Selecting previously unselected package python3-iniconfig. 166s Preparing to unpack .../116-python3-iniconfig_1.1.1-2_all.deb ... 166s Unpacking python3-iniconfig (1.1.1-2) ... 167s Selecting previously unselected package python3-iow. 167s Preparing to unpack .../117-python3-iow_1.0.6-5_amd64.deb ... 167s Unpacking python3-iow (1.0.6-5) ... 167s Selecting previously unselected package python3-parso. 167s Preparing to unpack .../118-python3-parso_0.8.3-1_all.deb ... 167s Unpacking python3-parso (0.8.3-1) ... 167s Selecting previously unselected package python3-typeshed. 167s Preparing to unpack .../119-python3-typeshed_0.0~git20231111.6764465-3_all.deb ... 167s Unpacking python3-typeshed (0.0~git20231111.6764465-3) ... 167s Selecting previously unselected package python3-jedi. 167s Preparing to unpack .../120-python3-jedi_0.19.1+ds1-1_all.deb ... 167s Unpacking python3-jedi (0.19.1+ds1-1) ... 167s Selecting previously unselected package python3-matplotlib-inline. 167s Preparing to unpack .../121-python3-matplotlib-inline_0.1.6-2_all.deb ... 167s Unpacking python3-matplotlib-inline (0.1.6-2) ... 167s Selecting previously unselected package python3-ptyprocess. 167s Preparing to unpack .../122-python3-ptyprocess_0.7.0-5_all.deb ... 167s Unpacking python3-ptyprocess (0.7.0-5) ... 167s Selecting previously unselected package python3-pexpect. 168s Preparing to unpack .../123-python3-pexpect_4.9-2_all.deb ... 168s Unpacking python3-pexpect (4.9-2) ... 168s Selecting previously unselected package python3-wcwidth. 168s Preparing to unpack .../124-python3-wcwidth_0.2.5+dfsg1-1.1ubuntu1_all.deb ... 168s Unpacking python3-wcwidth (0.2.5+dfsg1-1.1ubuntu1) ... 168s Selecting previously unselected package python3-prompt-toolkit. 168s Preparing to unpack .../125-python3-prompt-toolkit_3.0.47-1_all.deb ... 168s Unpacking python3-prompt-toolkit (3.0.47-1) ... 168s Selecting previously unselected package python3-pure-eval. 168s Preparing to unpack .../126-python3-pure-eval_0.2.2-2_all.deb ... 168s Unpacking python3-pure-eval (0.2.2-2) ... 168s Selecting previously unselected package python3-stack-data. 168s Preparing to unpack .../127-python3-stack-data_0.6.3-1_all.deb ... 168s Unpacking python3-stack-data (0.6.3-1) ... 168s Selecting previously unselected package python3-ipython. 168s Preparing to unpack .../128-python3-ipython_8.20.0-1ubuntu1_all.deb ... 168s Unpacking python3-ipython (8.20.0-1ubuntu1) ... 168s Selecting previously unselected package python3-widgetsnbextension. 168s Preparing to unpack .../129-python3-widgetsnbextension_8.1.1-2_all.deb ... 168s Unpacking python3-widgetsnbextension (8.1.1-2) ... 168s Selecting previously unselected package python3-ipywidgets. 168s Preparing to unpack .../130-python3-ipywidgets_8.1.1-2_all.deb ... 168s Unpacking python3-ipywidgets (8.1.1-2) ... 168s Selecting previously unselected package python3-joblib. 168s Preparing to unpack .../131-python3-joblib_1.3.2-2_all.deb ... 168s Unpacking python3-joblib (1.3.2-2) ... 168s Selecting previously unselected package python3-kiwisolver. 168s Preparing to unpack .../132-python3-kiwisolver_1.4.5-1_amd64.deb ... 168s Unpacking python3-kiwisolver (1.4.5-1) ... 168s Selecting previously unselected package libopenjp2-7:amd64. 168s Preparing to unpack .../133-libopenjp2-7_2.5.0-2build3_amd64.deb ... 168s Unpacking libopenjp2-7:amd64 (2.5.0-2build3) ... 168s Selecting previously unselected package python3-pil:amd64. 168s Preparing to unpack .../134-python3-pil_10.3.0-2_amd64.deb ... 168s Unpacking python3-pil:amd64 (10.3.0-2) ... 168s Selecting previously unselected package python3-tk:amd64. 168s Preparing to unpack .../135-python3-tk_3.12.3-0ubuntu1_amd64.deb ... 168s Unpacking python3-tk:amd64 (3.12.3-0ubuntu1) ... 168s Selecting previously unselected package python3-pil.imagetk:amd64. 168s Preparing to unpack .../136-python3-pil.imagetk_10.3.0-2_amd64.deb ... 168s Unpacking python3-pil.imagetk:amd64 (10.3.0-2) ... 168s Selecting previously unselected package python3-packaging. 168s Preparing to unpack .../137-python3-packaging_24.0-1_all.deb ... 168s Unpacking python3-packaging (24.0-1) ... 168s Selecting previously unselected package python3-matplotlib. 168s Preparing to unpack .../138-python3-matplotlib_3.6.3-2ubuntu1_amd64.deb ... 168s Unpacking python3-matplotlib (3.6.3-2ubuntu1) ... 168s Selecting previously unselected package python3-nacl. 168s Preparing to unpack .../139-python3-nacl_1.5.0-4build1_amd64.deb ... 168s Unpacking python3-nacl (1.5.0-4build1) ... 168s Selecting previously unselected package python3-networkx. 168s Preparing to unpack .../140-python3-networkx_3.2.1-4ubuntu1_all.deb ... 168s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 169s Selecting previously unselected package python3-bcrypt. 169s Preparing to unpack .../141-python3-bcrypt_4.1.2-1_amd64.deb ... 169s Unpacking python3-bcrypt (4.1.2-1) ... 169s Selecting previously unselected package python3-paramiko. 169s Preparing to unpack .../142-python3-paramiko_3.4.0-1ubuntu1_all.deb ... 169s Unpacking python3-paramiko (3.4.0-1ubuntu1) ... 169s Selecting previously unselected package python3-setproctitle:amd64. 169s Preparing to unpack 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169s Selecting previously unselected package python3-patsy. 169s Preparing to unpack .../149-python3-patsy_0.5.6-1_all.deb ... 169s Unpacking python3-patsy (0.5.6-1) ... 169s Selecting previously unselected package python3-platformdirs. 169s Preparing to unpack .../150-python3-platformdirs_4.2.1-1_all.deb ... 169s Unpacking python3-platformdirs (4.2.1-1) ... 169s Selecting previously unselected package python3-pluggy. 170s Preparing to unpack .../151-python3-pluggy_1.5.0-1_all.deb ... 170s Unpacking python3-pluggy (1.5.0-1) ... 170s Selecting previously unselected package python3-pytest. 170s Preparing to unpack .../152-python3-pytest_7.4.4-1_all.deb ... 170s Unpacking python3-pytest (7.4.4-1) ... 170s Selecting previously unselected package libjs-jquery-isonscreen. 170s Preparing to unpack .../153-libjs-jquery-isonscreen_1.2.0-1.1_all.deb ... 170s Unpacking libjs-jquery-isonscreen (1.2.0-1.1) ... 170s Selecting previously unselected package python3-pytest-cov. 170s Preparing to unpack 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.../159-python3-statsmodels-lib_0.14.2+dfsg-1_amd64.deb ... 170s Unpacking python3-statsmodels-lib:amd64 (0.14.2+dfsg-1) ... 170s Selecting previously unselected package python3-statsmodels. 170s Preparing to unpack .../160-python3-statsmodels_0.14.2+dfsg-1_all.deb ... 170s Unpacking python3-statsmodels (0.14.2+dfsg-1) ... 170s Selecting previously unselected package python3-tomlkit. 170s Preparing to unpack .../161-python3-tomlkit_0.12.5-1_all.deb ... 170s Unpacking python3-tomlkit (0.12.5-1) ... 170s Selecting previously unselected package python3-tzlocal. 170s Preparing to unpack .../162-python3-tzlocal_5.2-1.1_all.deb ... 170s Unpacking python3-tzlocal (5.2-1.1) ... 170s Selecting previously unselected package python3-unifrac. 170s Preparing to unpack .../163-python3-unifrac_1.3-3_amd64.deb ... 170s Unpacking python3-unifrac (1.3-3) ... 170s Selecting previously unselected package qiime. 170s Preparing to unpack .../164-qiime_2024.5.0-1ubuntu1_all.deb ... 170s Unpacking qiime (2024.5.0-1ubuntu1) ... 171s Selecting previously unselected package q2templates. 171s Preparing to unpack .../165-q2templates_2024.5.0+ds-1_all.deb ... 171s Unpacking q2templates (2024.5.0+ds-1) ... 171s Selecting previously unselected package libyajl2:amd64. 171s Preparing to unpack .../166-libyajl2_2.1.0-5build1_amd64.deb ... 171s Unpacking libyajl2:amd64 (2.1.0-5build1) ... 171s Selecting previously unselected package python3-ijson. 171s Preparing to unpack .../167-python3-ijson_3.3.0-1_amd64.deb ... 171s Unpacking python3-ijson (3.3.0-1) ... 171s Selecting previously unselected package q2-types. 171s Preparing to unpack .../168-q2-types_2024.5.0-1ubuntu1_all.deb ... 171s Unpacking q2-types (2024.5.0-1ubuntu1) ... 171s Selecting previously unselected package q2-emperor. 171s Preparing to unpack .../169-q2-emperor_2024.5.0-2_all.deb ... 171s Unpacking q2-emperor (2024.5.0-2) ... 171s Selecting previously unselected package q2-feature-table. 171s Preparing to unpack .../170-q2-feature-table_2024.5.0+dfsg-1ubuntu1_all.deb ... 171s Unpacking q2-feature-table (2024.5.0+dfsg-1ubuntu1) ... 171s Selecting previously unselected package zip. 171s Preparing to unpack .../171-zip_3.0-13build1_amd64.deb ... 171s Unpacking zip (3.0-13build1) ... 171s Selecting previously unselected package unzip. 171s Preparing to unpack .../172-unzip_6.0-28ubuntu5_amd64.deb ... 171s Unpacking unzip (6.0-28ubuntu5) ... 171s Selecting previously unselected package xdg-utils. 171s Preparing to unpack .../173-xdg-utils_1.2.1-0ubuntu1_all.deb ... 171s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 171s Selecting previously unselected package r-base-core. 171s Preparing to unpack .../174-r-base-core_4.4.1-1_amd64.deb ... 171s Unpacking r-base-core (4.4.1-1) ... 172s Selecting previously unselected package r-cran-permute. 172s Preparing to unpack .../175-r-cran-permute_0.9-7-1_all.deb ... 172s Unpacking r-cran-permute (0.9-7-1) ... 172s Selecting previously unselected package r-cran-lattice. 172s Preparing to unpack .../176-r-cran-lattice_0.22-6-1_amd64.deb ... 172s Unpacking r-cran-lattice (0.22-6-1) ... 172s Selecting previously unselected package r-cran-mass. 172s Preparing to unpack .../177-r-cran-mass_7.3-61-1_amd64.deb ... 172s Unpacking r-cran-mass (7.3-61-1) ... 172s Selecting previously unselected package r-cran-cluster. 172s Preparing to unpack .../178-r-cran-cluster_2.1.6-1build1_amd64.deb ... 172s Unpacking r-cran-cluster (2.1.6-1build1) ... 172s Selecting previously unselected package r-cran-nlme. 172s Preparing to unpack .../179-r-cran-nlme_3.1.165-1_amd64.deb ... 172s Unpacking r-cran-nlme (3.1.165-1) ... 172s Selecting previously unselected package r-cran-matrix. 172s Preparing to unpack .../180-r-cran-matrix_1.7-0-3_amd64.deb ... 172s Unpacking r-cran-matrix (1.7-0-3) ... 172s Selecting previously unselected package r-cran-mgcv. 172s Preparing to unpack .../181-r-cran-mgcv_1.9-1-1_amd64.deb ... 172s Unpacking r-cran-mgcv (1.9-1-1) ... 172s Selecting previously unselected package r-cran-vegan. 172s Preparing to unpack .../182-r-cran-vegan_2.6-6.1+dfsg-1_amd64.deb ... 172s Unpacking r-cran-vegan (2.6-6.1+dfsg-1) ... 172s Selecting previously unselected package unifrac-tools. 172s Preparing to unpack .../183-unifrac-tools_1.4-3build2_amd64.deb ... 172s Unpacking unifrac-tools (1.4-3build2) ... 172s Selecting previously unselected package q2-diversity-lib. 172s Preparing to unpack .../184-q2-diversity-lib_2024.5.0-1ubuntu1_all.deb ... 172s Unpacking q2-diversity-lib (2024.5.0-1ubuntu1) ... 172s Selecting previously unselected package autopkgtest-satdep. 172s Preparing to unpack .../185-1-autopkgtest-satdep.deb ... 172s Unpacking autopkgtest-satdep (0) ... 172s Setting up javascript-common (11+nmu1) ... 172s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 172s Setting up liblcms2-2:amd64 (2.14-2build1) ... 172s Setting up python3-iniconfig (1.1.1-2) ... 172s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ... 172s Setting up libnorm1t64:amd64 (1.5.9+dfsg-3.1build1) ... 172s Setting up libpaper1:amd64 (1.1.29build1) ... 172s 172s Creating config file /etc/papersize with new version 173s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 175s Regenerating fonts cache... done. 175s Setting up python3-pure-eval (0.2.2-2) ... 175s Setting up python3-filelock (3.15.4-1) ... 175s Setting up libsodium23:amd64 (1.0.18-1build3) ... 175s Setting up jupyter-nbextension-jupyter-js-widgets (8.1.1-2) ... 175s Setting up python3-tblib (3.0.0-5) ... 175s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ... 175s Setting up python3-py (1.11.0-2) ... 175s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 175s Setting up python3-joblib (1.3.2-2) ... 175s Setting up libjs-popper.js (1.16.1+ds-6) ... 175s Setting up python3-parso (0.8.3-1) ... 176s Setting up python3-colorama (0.4.6-4) ... 176s Setting up python3-lz4 (4.0.2+dfsg-1build4) ... 176s Setting up python3-public (4.1.0-1) ... 176s Setting up libxcb-render0:amd64 (1.17.0-2) ... 176s Setting up python3-asttokens (2.4.1-1) ... 176s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 176s Setting up python3-unicodedata2 (15.1.0+ds-1build1) ... 176s Setting up fonts-lyx (2.4.1-1) ... 176s Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... 176s Setting up unzip (6.0-28ubuntu5) ... 176s Setting up python3-bcrypt (4.1.2-1) ... 176s Setting up python3-typeguard (4.1.5-1) ... 176s Setting up python3-threadpoolctl (3.1.0-1) ... 176s Setting up libyajl2:amd64 (2.1.0-5build1) ... 176s Setting up x11-common (1:7.7+23ubuntu3) ... 177s Setting up python3-itsdangerous (2.2.0-1) ... 177s Setting up libqhull-r8.0:amd64 (2020.2-6build1) ... 177s Setting up python3-all (3.12.3-0ubuntu1) ... 177s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 177s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 177s Setting up libpaper-utils (1.1.29build1) ... 177s Setting up node-fortawesome-fontawesome-free (6.4.2+ds1-1) ... 177s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 177s Setting up libgomp1:amd64 (14.1.0-1ubuntu1) ... 177s Setting up python3-click (8.1.7-1) ... 177s Setting up python3-networkx (3.2.1-4ubuntu1) ... 179s Setting up libcairo2:amd64 (1.18.0-3build1) ... 179s Setting up libaec0:amd64 (1.1.3-1) ... 179s Setting up python3-platformdirs (4.2.1-1) ... 179s Setting up python3-psutil (5.9.8-2build2) ... 179s Setting up python3-natsort (8.0.2-2) ... 179s Setting up unicode-data (15.1.0-1) ... 179s Setting up python3-flufl.lock (8.1.0-1) ... 179s Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build1) ... 179s Setting up python3-decorator (5.1.1-5) ... 180s Setting up zip (3.0-13build1) ... 180s Setting up libblas3:amd64 (3.12.0-3build1) ... 180s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 180s Setting up python3-packaging (24.0-1) ... 180s Setting up python3-wcwidth (0.2.5+dfsg1-1.1ubuntu1) ... 180s Setting up python3-typeshed (0.0~git20231111.6764465-3) ... 180s Setting up python3-executing (2.0.1-0.1) ... 180s Setting up python3-dill (0.3.8-1) ... 180s Setting up python3-brotli (1.1.0-2build2) ... 180s Setting up liblzf1:amd64 (3.6-4) ... 180s Setting up python3-greenlet (3.0.3-0ubuntu5) ... 180s Setting up python3-cycler (0.12.1-1) ... 181s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 181s Setting up python3-kiwisolver (1.4.5-1) ... 181s Setting up python3-setproctitle:amd64 (1.3.3-1build2) ... 181s Setting up libtcl8.6:amd64 (8.6.14+dfsg-1build1) ... 181s Setting up libgfortran5:amd64 (14.1.0-1ubuntu1) ... 181s Setting up python3-pluggy (1.5.0-1) ... 181s Setting up python3-traitlets (5.5.0-2) ... 181s Setting up libxslt1.1:amd64 (1.1.39-0exp1build1) ... 181s Setting up libopenjp2-7:amd64 (2.5.0-2build3) ... 181s Setting up libharfbuzz0b:amd64 (8.3.0-2build2) ... 181s Setting up libthai-data (0.1.29-2build1) ... 181s Setting up python3-dateutil (2.9.0-2) ... 181s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 181s Setting up python3-bibtexparser (2.0.0b5+really1.4.1-1) ... 182s /usr/lib/python3/dist-packages/bibtexparser/latexenc.py:93: SyntaxWarning: invalid escape sequence '\g' 182s string = re.sub('([^{]|^)([A-Z])([^}]|$)', '\g<1>{\g<2>}\g<3>', string) 182s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 182s Setting up python3-mpmath (1.3.0-1) ... 182s Setting up python3-tzlocal (5.2-1.1) ... 182s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... 182s Setting up python-matplotlib-data (3.6.3-2ubuntu1) ... 182s Setting up python3-tomlkit (0.12.5-1) ... 182s Setting up libwebpmux3:amd64 (1.4.0-0.1) ... 182s Setting up node-normalize.css (8.0.1-5) ... 182s Setting up python3-appdirs (1.4.4-4) ... 182s Setting up python3-stack-data (0.6.3-1) ... 183s Setting up libssw0:amd64 (1.1-14build1) ... 183s Setting up xdg-utils (1.2.1-0ubuntu1) ... 183s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 183s Setting up python3-nacl (1.5.0-4build1) ... 183s Setting up python3-globus-sdk (3.41.0-1) ... 183s Setting up libsz2:amd64 (1.1.3-1) ... 183s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 183s Setting up python3-ptyprocess (0.7.0-5) ... 183s Setting up python3-widgetsnbextension (8.1.1-2) ... 183s Setting up python3-prompt-toolkit (3.0.47-1) ... 184s Setting up python3-sympy (1.12-8) ... 189s Setting up libice6:amd64 (2:1.0.10-1build3) ... 189s Setting up liblapack3:amd64 (3.12.0-3build1) ... 189s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 189s Setting up libxft2:amd64 (2.3.6-1build1) ... 189s Setting up libopenblas0-pthread:amd64 (0.3.27+ds-2) ... 189s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 189s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 189s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode 189s Setting up libzmq5:amd64 (4.3.5-1build2) ... 189s Setting up python3-jedi (0.19.1+ds1-1) ... 190s Setting up python3-ijson (3.3.0-1) ... 190s Setting up python3-pytest (7.4.4-1) ... 190s Setting up libtk8.6:amd64 (8.6.14-1build1) ... 190s Setting up python3-sqlalchemy (1.4.50+ds1-1build1) ... 191s Setting up python3-matplotlib-inline (0.1.6-2) ... 191s Setting up python3-comm (0.2.1-1) ... 191s Setting up python3-fs (2.4.16-4) ... 192s Setting up libthai0:amd64 (0.1.29-2build1) ... 192s Setting up libtmglib3:amd64 (3.12.0-3build1) ... 192s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 192s Setting up python3-werkzeug (3.0.3-1) ... 192s Setting up python3-pexpect (4.9-2) ... 192s Setting up python3-zmq (24.0.1-5build1) ... 192s Setting up libjs-jquery-metadata (12-4) ... 192s Setting up libraqm0:amd64 (0.10.1-1build1) ... 192s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 192s Setting up python3-numpy (1:1.26.4+ds-10) ... 194s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... 194s Setting up python3-hdmedians (0.14.2-5.1build1) ... 194s Setting up libopenblas0:amd64 (0.3.27+ds-2) ... 194s Setting up python3-lxml:amd64 (5.2.1-1) ... 194s Setting up liblapacke:amd64 (3.12.0-3build1) ... 194s Setting up python3-contourpy (1.0.7-3) ... 194s Setting up python3-paramiko (3.4.0-1ubuntu1) ... 195s Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 195s Setting up libsm6:amd64 (2:1.2.3-1build3) ... 195s Setting up python3-statsmodels-lib:amd64 (0.14.2+dfsg-1) ... 195s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 195s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 195s Setting up tk8.6-blt2.5 (2.5.3+dfsg-7build1) ... 195s Setting up python3-scipy (1.12.0-2) ... 198s Setting up python3-flask (3.0.3-1ubuntu1) ... 198s Setting up blt (2.5.3+dfsg-7build1) ... 198s Setting up python3-pandas-lib:amd64 (2.2.2+dfsg-4) ... 198s Setting up libpango-1.0-0:amd64 (1.54.0+ds-1) ... 198s Setting up libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-3.1ubuntu4) ... 198s Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-3) ... 198s Setting up python3-h5py-serial (3.10.0-1ubuntu3) ... 198s Setting up python3-tk:amd64 (3.12.3-0ubuntu1) ... 198s Setting up python3-pytest-cov (5.0.0-1) ... 198s Setting up python3-patsy (0.5.6-1) ... 199s Setting up python3-pil:amd64 (10.3.0-2) ... 199s Setting up python3-pandas (2.2.2+dfsg-4) ... 203s Setting up python3-pil.imagetk:amd64 (10.3.0-2) ... 203s Setting up python3-ipython (8.20.0-1ubuntu1) ... 204s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 204s Setting up python3-h5py (3.10.0-1ubuntu3) ... 204s Setting up python3-sklearn (1.4.2+dfsg-3) ... 206s Setting up python3-statsmodels (0.14.2+dfsg-1) ... 209s Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-1) ... 209s Setting up python3-flask-sqlalchemy (3.0.3-1) ... 209s Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-1) ... 209s Setting up libssu0:amd64 (1.4-3build2) ... 209s Setting up unifrac-tools (1.4-3build2) ... 209s Setting up q2templates (2024.5.0+ds-1) ... 209s Setting up python3-ipywidgets (8.1.1-2) ... 209s /usr/lib/python3/dist-packages/ipywidgets/widgets/tests/test_traits.py:61: SyntaxWarning: invalid escape sequence '\.' 209s 'var(--my-color-\.)', # CSS variable with escaped characters 209s Setting up python3-parsl (2024.05.27+ds-1) ... 210s Setting up qiime (2024.5.0-1ubuntu1) ... 210s Setting up python3-biom-format (2.1.16-1) ... 210s Setting up python3-skbio (0.6.1-2) ... 211s Setting up q2-types (2024.5.0-1ubuntu1) ... 211s Setting up r-base-core (4.4.1-1) ... 211s 211s Creating config file /etc/R/Renviron with new version 211s Setting up r-cran-lattice (0.22-6-1) ... 211s Setting up r-cran-nlme (3.1.165-1) ... 211s Setting up r-cran-cluster (2.1.6-1build1) ... 211s Setting up python3-iow (1.0.6-5) ... 211s Setting up r-cran-permute (0.9-7-1) ... 211s Setting up r-cran-mass (7.3-61-1) ... 211s Setting up python3-emperor (1.0.3+ds-9.1) ... 212s Setting up python3-unifrac (1.3-3) ... 212s Setting up r-cran-matrix (1.7-0-3) ... 212s Setting up r-cran-mgcv (1.9-1-1) ... 212s Setting up q2-emperor (2024.5.0-2) ... 212s Setting up r-cran-vegan (2.6-6.1+dfsg-1) ... 212s Setting up python3-fonttools (4.46.0-1build2) ... 213s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... 213s Setting up python3-matplotlib (3.6.3-2ubuntu1) ... 214s Setting up python3-seaborn (0.13.2-4) ... 214s Setting up q2-feature-table (2024.5.0+dfsg-1ubuntu1) ... 215s Setting up q2-diversity-lib (2024.5.0-1ubuntu1) ... 215s Setting up autopkgtest-satdep (0) ... 215s Processing triggers for libc-bin (2.39-0ubuntu9) ... 215s Processing triggers for man-db (2.12.1-2) ... 216s Processing triggers for install-info (7.1-3build2) ... 224s (Reading database ... 106216 files and directories currently installed.) 224s Removing autopkgtest-satdep (0) ... 224s autopkgtest [00:35:39]: test run-unit-test: [----------------------- 224s /tmp/autopkgtest.nHW5X6/build.nlA/src/debian/tests/run-unit-test: line 27: python3.11: command not found 224s autopkgtest [00:35:39]: test run-unit-test: -----------------------] 225s autopkgtest [00:35:40]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 225s run-unit-test FAIL non-zero exit status 127 225s autopkgtest [00:35:40]: @@@@@@@@@@@@@@@@@@@@ summary 225s run-unit-test FAIL non-zero exit status 127 235s nova [W] Skipping flock for amd64 235s Creating nova instance adt-oracular-amd64-q2-diversity-lib-20240711-003155-juju-7f2275-prod-proposed-migration-environment-2-22367b8a-5f80-47cb-9a55-ca0c3cdacad9 from image adt/ubuntu-oracular-amd64-server-20240710.img (UUID 5752f3e2-d303-4b6d-ba1a-ec007c9a6e6a)...