0s autopkgtest [09:02:11]: starting date and time: 2024-07-08 09:02:11+0000 0s autopkgtest [09:02:11]: git checkout: fd3bed09 nova: allow more retries for quota issues 0s autopkgtest [09:02:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wi84mki7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pandas --apt-upgrade python-pyomop --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pandas/2.2.2+dfsg-4 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-11.secgroup --name adt-oracular-amd64-python-pyomop-20240708-090211-juju-7f2275-prod-proposed-migration-environment-2-a5778230-1624-45d1-bbe7-87c231a5cb16 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 407s autopkgtest [09:08:58]: testbed dpkg architecture: amd64 408s autopkgtest [09:08:59]: testbed apt version: 2.9.6 408s autopkgtest [09:08:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 410s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [126 kB] 410s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [353 kB] 410s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2576 B] 410s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [43.2 kB] 410s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [8548 B] 410s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [74.0 kB] 410s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [101 kB] 410s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 c-n-f Metadata [2592 B] 410s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [34.9 kB] 410s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [6244 B] 410s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 c-n-f Metadata [368 B] 410s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [199 kB] 410s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [345 kB] 410s Get:14 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 c-n-f Metadata [9628 B] 410s Get:15 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3052 B] 410s Get:16 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [7644 B] 410s Get:17 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 c-n-f Metadata [276 B] 411s Fetched 1317 kB in 0s (4243 kB/s) 411s Reading package lists... 500s Reading package lists...Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 500s Get:2 http://ftpmaster.internal/ubuntu oracular InRelease [121 kB] 500s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 500s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 500s Get:5 http://ftpmaster.internal/ubuntu oracular/universe Sources [20.3 MB] 500s Get:6 http://ftpmaster.internal/ubuntu oracular/universe i386 Packages [8739 kB] 500s Get:7 http://ftpmaster.internal/ubuntu oracular/universe amd64 Packages [15.8 MB] 500s Fetched 44.9 MB in 4s (12.1 MB/s) 500s Reading package lists... 500s autopkgtest [09:10:17]: rebooting testbed after setup commands that affected boot 500s 500s Building dependency tree... 500s Reading state information... 500s Calculating upgrade... 500s The following packages will be upgraded: 500s fuse3 libfuse3-3 500s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 500s Need to get 109 kB of archives. 500s After this operation, 4096 B of additional disk space will be used. 500s Get:1 http://ftpmaster.internal/ubuntu oracular/main amd64 fuse3 amd64 3.14.0-6 [25.5 kB] 500s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 libfuse3-3 amd64 3.14.0-6 [83.2 kB] 500s Fetched 109 kB in 0s (3169 kB/s) 500s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74464 files and directories currently installed.) 500s Preparing to unpack .../fuse3_3.14.0-6_amd64.deb ... 500s Adding 'diversion of /bin/fusermount to /bin/fusermount.usr-is-merged by fuse3' 500s Adding 'diversion of /sbin/mount.fuse to /sbin/mount.fuse.usr-is-merged by fuse3' 500s Unpacking fuse3 (3.14.0-6) over (3.14.0-5build1) ... 500s Preparing to unpack .../libfuse3-3_3.14.0-6_amd64.deb ... 500s Unpacking libfuse3-3:amd64 (3.14.0-6) over (3.14.0-5build1) ... 500s Setting up libfuse3-3:amd64 (3.14.0-6) ... 500s Setting up fuse3 (3.14.0-6) ... 500s Removing 'diversion of /bin/fusermount to /bin/fusermount.usr-is-merged by fuse3' 500s Removing 'diversion of /sbin/mount.fuse to /sbin/mount.fuse.usr-is-merged by fuse3' 500s update-initramfs: deferring update (trigger activated) 500s Processing triggers for libc-bin (2.39-0ubuntu9) ... 500s Processing triggers for man-db (2.12.1-2) ... 500s Processing triggers for initramfs-tools (0.142ubuntu29) ... 500s update-initramfs: Generating /boot/initrd.img-6.8.0-31-generic 500s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 500s Reading package lists... 500s Building dependency tree... 500s Reading state information... 500s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 500s Reading package lists... 500s Building dependency tree... 500s Reading state information... 500s Calculating upgrade... 500s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 500s Reading package lists... 500s Building dependency tree... 500s Reading state information... 500s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 505s autopkgtest [09:10:36]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 515s autopkgtest [09:10:46]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pyomop 536s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-pyomop 4.2.0-2 (dsc) [2492 B] 536s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-pyomop 4.2.0-2 (tar) [40.3 kB] 536s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-pyomop 4.2.0-2 (diff) [5336 B] 536s gpgv: Signature made Fri Apr 26 12:33:11 2024 UTC 536s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 536s gpgv: Can't check signature: No public key 536s dpkg-source: warning: cannot verify inline signature for ./python-pyomop_4.2.0-2.dsc: no acceptable signature found 536s autopkgtest [09:11:07]: testing package python-pyomop version 4.2.0-2 536s autopkgtest [09:11:07]: build not needed 537s autopkgtest [09:11:08]: test upstream: preparing testbed 537s Reading package lists... 537s Building dependency tree... 537s Reading state information... 538s Starting pkgProblemResolver with broken count: 0 538s Starting 2 pkgProblemResolver with broken count: 0 538s Done 538s The following additional packages will be installed: 538s autoconf automake autopoint autotools-dev build-essential cpp cpp-13 538s cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 538s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common docutils-doc 538s dwz fonts-mathjax fonts-open-sans g++ g++-13 g++-13-x86-64-linux-gnu 538s g++-x86-64-linux-gnu gcc gcc-13 gcc-13-base gcc-13-x86-64-linux-gnu 538s gcc-x86-64-linux-gnu gettext help2man intltool-debian javascript-common 538s libarchive-zip-perl libasan8 libatomic1 libblas3 libcc1-0 libdebhelper-perl 538s libfile-stripnondeterminism-perl libgcc-13-dev libgfortran5 libgomp1 538s libhwasan0 libisl23 libitm1 libjs-bootstrap4 libjs-jquery libjs-mathjax 538s libjs-popper.js libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 538s liblbfgsb0 liblsan0 libmpc3 libquadmath0 libstdc++-13-dev libtool libtsan2 538s libubsan1 m4 po-debconf pybuild-plugin-pyproject pyomop python-pandas-doc 538s python-pyomop-doc python-requests-doc python-scipy-doc python-sklearn-doc 538s python3-aiosqlite python3-alabaster python3-all python3-build python3-click 538s python3-colorama python3-commonmark python3-dateutil python3-decorator 538s python3-defusedxml python3-doc python3-docutils python3-greenlet 538s python3-imagesize python3-iniconfig python3-installer python3-numpy 538s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 538s python3-pyomop python3-pyproject-hooks python3-pytest python3-recommonmark 538s python3-roman python3-scipy python3-setuptools-scm python3-snowballstemmer 538s python3-sphinx python3-sqlalchemy python3-toml python3-wheel python3.12-doc 538s sgml-base sphinx-common sphinx-doc xml-core 538s Suggested packages: 538s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-13-locales 538s cpp-13-doc dh-make flit g++-multilib g++-13-multilib gcc-13-doc gcc-multilib 538s manpages-dev flex bison gdb gcc-doc gcc-13-multilib gdb-x86-64-linux-gnu 538s gettext-doc libasprintf-dev libgettextpo-dev apache2 | lighttpd | httpd 538s fonts-mathjax-extras fonts-stix libjs-mathjax-doc libstdc++-13-doc 538s libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl 538s python-numpy-doc python-aiosqlite-doc python3-pip python3-venv 538s python-build-doc python3-examples fonts-linuxlibertine | ttf-linux-libertine 538s texlive-lang-french texlive-latex-base texlive-latex-recommended 538s python-greenlet-dev python-greenlet-doc python-installer-doc gfortran 538s python3-dev python3-statsmodels python3-stemmer dvipng dvisvgm 538s fonts-freefont-otf imagemagick-6.q16 latexmk python3-lib2to3 538s python3-sphinx-rtd-theme tex-gyre texlive-fonts-recommended 538s texlive-latex-extra texlive-plain-generic python-sqlalchemy-doc python3-fdb 538s python3-pymssql python3-mysqldb python3-psycopg2 python3-asyncpg 538s sgml-base-doc 538s Recommended packages: 538s libarchive-cpio-perl node-jquery libjson-xs-perl libltdl-dev 538s libmail-sendmail-perl libpaper-utils python3-pil python3-matplotlib 538s python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-bs4 538s python3-html5lib python3-lxml python3-tables python3-numba 538s python3-sqlalchemy-ext 538s The following NEW packages will be installed: 538s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 538s cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 538s dh-autoreconf dh-python dh-strip-nondeterminism docutils-common docutils-doc 538s dwz fonts-mathjax fonts-open-sans g++ g++-13 g++-13-x86-64-linux-gnu 538s g++-x86-64-linux-gnu gcc gcc-13 gcc-13-base gcc-13-x86-64-linux-gnu 538s gcc-x86-64-linux-gnu gettext help2man intltool-debian javascript-common 538s libarchive-zip-perl libasan8 libatomic1 libblas3 libcc1-0 libdebhelper-perl 538s libfile-stripnondeterminism-perl libgcc-13-dev libgfortran5 libgomp1 538s libhwasan0 libisl23 libitm1 libjs-bootstrap4 libjs-jquery libjs-mathjax 538s libjs-popper.js libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 538s liblbfgsb0 liblsan0 libmpc3 libquadmath0 libstdc++-13-dev libtool libtsan2 538s libubsan1 m4 po-debconf pybuild-plugin-pyproject pyomop python-pandas-doc 538s python-pyomop-doc python-requests-doc python-scipy-doc python-sklearn-doc 538s python3-aiosqlite python3-alabaster python3-all python3-build python3-click 538s python3-colorama python3-commonmark python3-dateutil python3-decorator 538s python3-defusedxml python3-doc python3-docutils python3-greenlet 538s python3-imagesize python3-iniconfig python3-installer python3-numpy 538s python3-packaging python3-pandas python3-pandas-lib python3-pluggy 538s python3-pyomop python3-pyproject-hooks python3-pytest python3-recommonmark 538s python3-roman python3-scipy python3-setuptools-scm python3-snowballstemmer 538s python3-sphinx python3-sqlalchemy python3-toml python3-wheel python3.12-doc 538s sgml-base sphinx-common sphinx-doc xml-core 538s 0 upgraded, 109 newly installed, 0 to remove and 0 not upgraded. 538s Need to get 229 MB/229 MB of archives. 538s After this operation, 994 MB of additional disk space will be used. 538s Get:1 /tmp/autopkgtest.xQyGYj/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [888 B] 538s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 sgml-base all 1.31 [11.4 kB] 538s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 538s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 autoconf all 2.71-3 [339 kB] 538s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 autotools-dev all 20220109.1 [44.9 kB] 538s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 538s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 autopoint all 0.21-14ubuntu2 [422 kB] 538s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13-base amd64 13.2.0-23ubuntu4 [49.0 kB] 538s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 libisl23 amd64 0.26-3build1 [680 kB] 538s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 libmpc3 amd64 1.3.1-1build1 [54.5 kB] 538s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [11.2 MB] 538s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-13 amd64 13.2.0-23ubuntu4 [1032 B] 538s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 538s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 538s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libcc1-0 amd64 14.1.0-1ubuntu1 [48.0 kB] 538s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libgomp1 amd64 14.1.0-1ubuntu1 [148 kB] 538s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 libitm1 amd64 14.1.0-1ubuntu1 [29.1 kB] 538s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 libatomic1 amd64 14.1.0-1ubuntu1 [10.4 kB] 538s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 libasan8 amd64 14.1.0-1ubuntu1 [3025 kB] 538s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 liblsan0 amd64 14.1.0-1ubuntu1 [1313 kB] 538s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 libtsan2 amd64 14.1.0-1ubuntu1 [2736 kB] 538s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libubsan1 amd64 14.1.0-1ubuntu1 [1174 kB] 539s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libhwasan0 amd64 14.1.0-1ubuntu1 [1632 kB] 539s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libquadmath0 amd64 14.1.0-1ubuntu1 [153 kB] 539s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcc-13-dev amd64 13.2.0-23ubuntu4 [2688 kB] 539s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [21.9 MB] 539s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13 amd64 13.2.0-23ubuntu4 [482 kB] 539s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 539s Get:29 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 539s Get:30 http://ftpmaster.internal/ubuntu oracular/main amd64 libstdc++-13-dev amd64 13.2.0-23ubuntu4 [2399 kB] 539s Get:31 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [12.5 MB] 539s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-13 amd64 13.2.0-23ubuntu4 [14.5 kB] 539s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 539s Get:34 http://ftpmaster.internal/ubuntu oracular/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 539s Get:35 http://ftpmaster.internal/ubuntu oracular/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 539s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 libdebhelper-perl all 13.16ubuntu2 [92.9 kB] 539s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 libtool all 2.4.7-7build1 [166 kB] 539s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 dh-autoreconf all 20 [16.1 kB] 539s Get:39 http://ftpmaster.internal/ubuntu oracular/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 539s Get:40 http://ftpmaster.internal/ubuntu oracular/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 539s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 539s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 debugedit amd64 1:5.0-5build2 [46.1 kB] 539s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 dwz amd64 0.15-1build6 [115 kB] 539s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 gettext amd64 0.21-14ubuntu2 [864 kB] 539s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 539s Get:46 http://ftpmaster.internal/ubuntu oracular/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 539s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 debhelper all 13.16ubuntu2 [869 kB] 539s Get:48 http://ftpmaster.internal/ubuntu oracular/universe amd64 dh-python all 6.20240603 [112 kB] 539s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 xml-core all 0.19 [20.3 kB] 539s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 docutils-common all 0.20.1+dfsg-3 [132 kB] 539s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 docutils-doc all 0.20.1+dfsg-3 [1130 kB] 539s Get:52 http://ftpmaster.internal/ubuntu oracular/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 539s Get:53 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-open-sans all 1.11-2 [635 kB] 539s Get:54 http://ftpmaster.internal/ubuntu oracular/universe amd64 help2man amd64 1.49.3 [201 kB] 539s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 javascript-common all 11+nmu1 [5936 B] 539s Get:56 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 539s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-1ubuntu1 [928 kB] 539s Get:58 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 539s Get:59 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 539s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 539s Get:61 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 539s Get:62 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-sphinxdoc all 7.3.7-3 [154 kB] 539s Get:63 http://ftpmaster.internal/ubuntu oracular/main amd64 libjson-perl all 4.10000-1 [81.9 kB] 539s Get:64 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 539s Get:65 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 539s Get:66 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-packaging all 24.0-1 [41.1 kB] 539s Get:67 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pyproject-hooks all 1.1.0-1 [9852 B] 539s Get:68 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-toml all 0.10.2-1 [16.5 kB] 539s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-wheel all 0.43.0-1 [53.5 kB] 539s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-build all 1.2.1-1 [29.7 kB] 539s Get:71 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 539s Get:72 http://ftpmaster.internal/ubuntu oracular/universe amd64 pybuild-plugin-pyproject all 6.20240603 [1732 B] 539s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-aiosqlite all 0.17.0-2 [14.4 kB] 539s Get:74 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-colorama all 0.4.6-4 [32.1 kB] 539s Get:75 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-click all 8.1.7-1 [79.1 kB] 539s Get:76 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB] 539s Get:77 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [4437 kB] 539s Get:78 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pandas-lib amd64 2.2.2+dfsg-4 [4444 kB] 539s Get:79 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pandas all 2.2.2+dfsg-4 [3111 kB] 539s Get:80 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-greenlet amd64 3.0.3-0ubuntu5 [154 kB] 539s Get:81 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-sqlalchemy all 1.4.50+ds1-1build1 [1020 kB] 539s Get:82 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pyomop all 4.2.0-2 [13.2 kB] 539s Get:83 http://ftpmaster.internal/ubuntu oracular/universe amd64 pyomop all 4.2.0-2 [2812 B] 539s Get:84 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 539s Get:85 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python-pandas-doc all 2.2.2+dfsg-4 [10.4 MB] 539s Get:86 http://ftpmaster.internal/ubuntu oracular/universe amd64 python-pyomop-doc all 4.2.0-2 [69.8 kB] 539s Get:87 http://ftpmaster.internal/ubuntu oracular/main amd64 python-requests-doc all 2.32.3+dfsg-1ubuntu1 [174 kB] 539s Get:88 http://ftpmaster.internal/ubuntu oracular/universe amd64 python-sklearn-doc all 1.4.2+dfsg-3 [52.7 MB] 541s Get:89 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-all amd64 3.12.3-0ubuntu1 [888 B] 541s Get:90 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-commonmark all 0.9.1-6 [46.0 kB] 541s Get:91 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 541s Get:92 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-defusedxml all 0.7.1-2 [42.0 kB] 541s Get:93 http://ftpmaster.internal/ubuntu oracular/main amd64 python3.12-doc all 3.12.4-1ubuntu1 [12.1 MB] 541s Get:94 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-doc all 3.12.3-0ubuntu1 [10.1 kB] 541s Get:95 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-roman all 3.3-3 [9632 B] 541s Get:96 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-docutils all 0.20.1+dfsg-3 [393 kB] 541s Get:97 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-imagesize all 1.4.1-1 [6844 B] 541s Get:98 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 541s Get:99 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 541s Get:100 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pytest all 7.4.4-1 [305 kB] 541s Get:101 http://ftpmaster.internal/ubuntu oracular/main amd64 sphinx-common all 7.3.7-3 [773 kB] 541s Get:102 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-alabaster all 0.7.16-0.1 [18.5 kB] 541s Get:103 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 541s Get:104 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-sphinx all 7.3.7-3 [574 kB] 541s Get:105 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-recommonmark all 0.7.1+ds-5 [16.9 kB] 541s Get:106 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-setuptools-scm all 8.1.0-1 [32.2 kB] 541s Get:107 http://ftpmaster.internal/ubuntu oracular/main amd64 sphinx-doc all 7.3.7-3 [2313 kB] 541s Get:108 http://ftpmaster.internal/ubuntu oracular/universe amd64 python-scipy-doc all 1.12.0-2 [36.9 MB] 542s Get:109 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-scipy amd64 1.12.0-2 [16.5 MB] 543s Fetched 229 MB in 4s (58.4 MB/s) 543s Selecting previously unselected package sgml-base. 543s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74466 files and directories currently installed.) 543s Preparing to unpack .../000-sgml-base_1.31_all.deb ... 543s Unpacking sgml-base (1.31) ... 543s Selecting previously unselected package m4. 543s Preparing to unpack .../001-m4_1.4.19-4build1_amd64.deb ... 543s Unpacking m4 (1.4.19-4build1) ... 543s Selecting previously unselected package autoconf. 543s Preparing to unpack .../002-autoconf_2.71-3_all.deb ... 543s Unpacking autoconf (2.71-3) ... 543s Selecting previously unselected package autotools-dev. 543s Preparing to unpack .../003-autotools-dev_20220109.1_all.deb ... 543s Unpacking autotools-dev (20220109.1) ... 543s Selecting previously unselected package automake. 543s Preparing to unpack .../004-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 543s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 543s Selecting previously unselected package autopoint. 543s Preparing to unpack .../005-autopoint_0.21-14ubuntu2_all.deb ... 543s Unpacking autopoint (0.21-14ubuntu2) ... 543s Selecting previously unselected package gcc-13-base:amd64. 543s Preparing to unpack .../006-gcc-13-base_13.2.0-23ubuntu4_amd64.deb ... 543s Unpacking gcc-13-base:amd64 (13.2.0-23ubuntu4) ... 543s Selecting previously unselected package libisl23:amd64. 543s Preparing to unpack .../007-libisl23_0.26-3build1_amd64.deb ... 543s Unpacking libisl23:amd64 (0.26-3build1) ... 543s Selecting previously unselected package libmpc3:amd64. 543s Preparing to unpack .../008-libmpc3_1.3.1-1build1_amd64.deb ... 543s Unpacking libmpc3:amd64 (1.3.1-1build1) ... 543s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 543s Preparing to unpack .../009-cpp-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 543s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 544s Selecting previously unselected package cpp-13. 544s Preparing to unpack .../010-cpp-13_13.2.0-23ubuntu4_amd64.deb ... 544s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 544s Selecting previously unselected package cpp-x86-64-linux-gnu. 544s Preparing to unpack .../011-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 544s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 544s Selecting previously unselected package cpp. 544s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 544s Unpacking cpp (4:13.2.0-7ubuntu1) ... 544s Selecting previously unselected package libcc1-0:amd64. 544s Preparing to unpack .../013-libcc1-0_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libcc1-0:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libgomp1:amd64. 544s Preparing to unpack .../014-libgomp1_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libgomp1:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libitm1:amd64. 544s Preparing to unpack .../015-libitm1_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libitm1:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libatomic1:amd64. 544s Preparing to unpack .../016-libatomic1_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libatomic1:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libasan8:amd64. 544s Preparing to unpack .../017-libasan8_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libasan8:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package liblsan0:amd64. 544s Preparing to unpack .../018-liblsan0_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking liblsan0:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libtsan2:amd64. 544s Preparing to unpack .../019-libtsan2_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libtsan2:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libubsan1:amd64. 544s Preparing to unpack .../020-libubsan1_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libubsan1:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libhwasan0:amd64. 544s Preparing to unpack .../021-libhwasan0_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libhwasan0:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libquadmath0:amd64. 544s Preparing to unpack .../022-libquadmath0_14.1.0-1ubuntu1_amd64.deb ... 544s Unpacking libquadmath0:amd64 (14.1.0-1ubuntu1) ... 544s Selecting previously unselected package libgcc-13-dev:amd64. 544s Preparing to unpack .../023-libgcc-13-dev_13.2.0-23ubuntu4_amd64.deb ... 544s Unpacking libgcc-13-dev:amd64 (13.2.0-23ubuntu4) ... 544s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 544s Preparing to unpack .../024-gcc-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 544s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 545s Selecting previously unselected package gcc-13. 545s Preparing to unpack .../025-gcc-13_13.2.0-23ubuntu4_amd64.deb ... 545s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 545s Selecting previously unselected package gcc-x86-64-linux-gnu. 545s Preparing to unpack .../026-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 545s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 545s Selecting previously unselected package gcc. 545s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 545s Unpacking gcc (4:13.2.0-7ubuntu1) ... 545s Selecting previously unselected package libstdc++-13-dev:amd64. 545s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-23ubuntu4_amd64.deb ... 545s Unpacking libstdc++-13-dev:amd64 (13.2.0-23ubuntu4) ... 545s Selecting previously unselected package g++-13-x86-64-linux-gnu. 545s Preparing to unpack .../029-g++-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 545s Unpacking g++-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 545s Selecting previously unselected package g++-13. 545s Preparing to unpack .../030-g++-13_13.2.0-23ubuntu4_amd64.deb ... 545s Unpacking g++-13 (13.2.0-23ubuntu4) ... 545s Selecting previously unselected package g++-x86-64-linux-gnu. 545s Preparing to unpack .../031-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 545s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 545s Selecting previously unselected package g++. 545s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 545s Unpacking g++ (4:13.2.0-7ubuntu1) ... 545s Selecting previously unselected package build-essential. 545s Preparing to unpack .../033-build-essential_12.10ubuntu1_amd64.deb ... 545s Unpacking build-essential (12.10ubuntu1) ... 545s Selecting previously unselected package libdebhelper-perl. 545s Preparing to unpack .../034-libdebhelper-perl_13.16ubuntu2_all.deb ... 545s Unpacking libdebhelper-perl (13.16ubuntu2) ... 545s Selecting previously unselected package libtool. 545s Preparing to unpack .../035-libtool_2.4.7-7build1_all.deb ... 545s Unpacking libtool (2.4.7-7build1) ... 545s Selecting previously unselected package dh-autoreconf. 545s Preparing to unpack .../036-dh-autoreconf_20_all.deb ... 545s Unpacking dh-autoreconf (20) ... 545s Selecting previously unselected package libarchive-zip-perl. 545s Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ... 545s Unpacking libarchive-zip-perl (1.68-1) ... 545s Selecting previously unselected package libfile-stripnondeterminism-perl. 545s Preparing to unpack .../038-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 545s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 545s Selecting previously unselected package dh-strip-nondeterminism. 545s Preparing to unpack .../039-dh-strip-nondeterminism_1.14.0-1_all.deb ... 545s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 545s Selecting previously unselected package debugedit. 545s Preparing to unpack .../040-debugedit_1%3a5.0-5build2_amd64.deb ... 545s Unpacking debugedit (1:5.0-5build2) ... 545s Selecting previously unselected package dwz. 545s Preparing to unpack .../041-dwz_0.15-1build6_amd64.deb ... 545s Unpacking dwz (0.15-1build6) ... 545s Selecting previously unselected package gettext. 545s Preparing to unpack .../042-gettext_0.21-14ubuntu2_amd64.deb ... 545s Unpacking gettext (0.21-14ubuntu2) ... 546s Selecting previously unselected package intltool-debian. 546s Preparing to unpack .../043-intltool-debian_0.35.0+20060710.6_all.deb ... 546s Unpacking intltool-debian (0.35.0+20060710.6) ... 546s Selecting previously unselected package po-debconf. 546s Preparing to unpack .../044-po-debconf_1.0.21+nmu1_all.deb ... 546s Unpacking po-debconf (1.0.21+nmu1) ... 546s Selecting previously unselected package debhelper. 546s Preparing to unpack .../045-debhelper_13.16ubuntu2_all.deb ... 546s Unpacking debhelper (13.16ubuntu2) ... 546s Selecting previously unselected package dh-python. 546s Preparing to unpack .../046-dh-python_6.20240603_all.deb ... 546s Unpacking dh-python (6.20240603) ... 546s Selecting previously unselected package xml-core. 546s Preparing to unpack .../047-xml-core_0.19_all.deb ... 546s Unpacking xml-core (0.19) ... 546s Selecting previously unselected package docutils-common. 546s Preparing to unpack .../048-docutils-common_0.20.1+dfsg-3_all.deb ... 546s Unpacking docutils-common (0.20.1+dfsg-3) ... 546s Selecting previously unselected package docutils-doc. 546s Preparing to unpack .../049-docutils-doc_0.20.1+dfsg-3_all.deb ... 546s Unpacking docutils-doc (0.20.1+dfsg-3) ... 546s Selecting previously unselected package fonts-mathjax. 546s Preparing to unpack .../050-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 546s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 546s Selecting previously unselected package fonts-open-sans. 546s Preparing to unpack .../051-fonts-open-sans_1.11-2_all.deb ... 546s Unpacking fonts-open-sans (1.11-2) ... 546s Selecting previously unselected package help2man. 546s Preparing to unpack .../052-help2man_1.49.3_amd64.deb ... 546s Unpacking help2man (1.49.3) ... 546s Selecting previously unselected package javascript-common. 546s Preparing to unpack .../053-javascript-common_11+nmu1_all.deb ... 546s Unpacking javascript-common (11+nmu1) ... 546s Selecting previously unselected package libblas3:amd64. 546s Preparing to unpack .../054-libblas3_3.12.0-3build1_amd64.deb ... 546s Unpacking libblas3:amd64 (3.12.0-3build1) ... 546s Selecting previously unselected package libgfortran5:amd64. 546s Preparing to unpack .../055-libgfortran5_14.1.0-1ubuntu1_amd64.deb ... 546s Unpacking libgfortran5:amd64 (14.1.0-1ubuntu1) ... 546s Selecting previously unselected package libjs-popper.js. 546s Preparing to unpack .../056-libjs-popper.js_1.16.1+ds-6_all.deb ... 546s Unpacking libjs-popper.js (1.16.1+ds-6) ... 546s Selecting previously unselected package libjs-bootstrap4. 546s Preparing to unpack .../057-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 546s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 546s Selecting previously unselected package libjs-jquery. 546s Preparing to unpack .../058-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 546s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 546s Selecting previously unselected package libjs-underscore. 546s Preparing to unpack .../059-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 546s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 546s Selecting previously unselected package libjs-sphinxdoc. 546s Preparing to unpack .../060-libjs-sphinxdoc_7.3.7-3_all.deb ... 546s Unpacking libjs-sphinxdoc (7.3.7-3) ... 546s Selecting previously unselected package libjson-perl. 546s Preparing to unpack .../061-libjson-perl_4.10000-1_all.deb ... 546s Unpacking libjson-perl (4.10000-1) ... 546s Selecting previously unselected package liblapack3:amd64. 546s Preparing to unpack .../062-liblapack3_3.12.0-3build1_amd64.deb ... 546s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 547s Selecting previously unselected package liblbfgsb0:amd64. 547s Preparing to unpack .../063-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 547s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 547s Selecting previously unselected package python3-packaging. 547s Preparing to unpack .../064-python3-packaging_24.0-1_all.deb ... 547s Unpacking python3-packaging (24.0-1) ... 547s Selecting previously unselected package python3-pyproject-hooks. 547s Preparing to unpack .../065-python3-pyproject-hooks_1.1.0-1_all.deb ... 547s Unpacking python3-pyproject-hooks (1.1.0-1) ... 547s Selecting previously unselected package python3-toml. 547s Preparing to unpack .../066-python3-toml_0.10.2-1_all.deb ... 547s Unpacking python3-toml (0.10.2-1) ... 547s Selecting previously unselected package python3-wheel. 547s Preparing to unpack .../067-python3-wheel_0.43.0-1_all.deb ... 547s Unpacking python3-wheel (0.43.0-1) ... 547s Selecting previously unselected package python3-build. 547s Preparing to unpack .../068-python3-build_1.2.1-1_all.deb ... 547s Unpacking python3-build (1.2.1-1) ... 547s Selecting previously unselected package python3-installer. 547s Preparing to unpack .../069-python3-installer_0.7.0+dfsg1-3_all.deb ... 547s Unpacking python3-installer (0.7.0+dfsg1-3) ... 547s Selecting previously unselected package pybuild-plugin-pyproject. 547s Preparing to unpack .../070-pybuild-plugin-pyproject_6.20240603_all.deb ... 547s Unpacking pybuild-plugin-pyproject (6.20240603) ... 547s Selecting previously unselected package python3-aiosqlite. 547s Preparing to unpack .../071-python3-aiosqlite_0.17.0-2_all.deb ... 547s Unpacking python3-aiosqlite (0.17.0-2) ... 547s Selecting previously unselected package python3-colorama. 547s Preparing to unpack .../072-python3-colorama_0.4.6-4_all.deb ... 547s Unpacking python3-colorama (0.4.6-4) ... 547s Selecting previously unselected package python3-click. 547s Preparing to unpack .../073-python3-click_8.1.7-1_all.deb ... 547s Unpacking python3-click (8.1.7-1) ... 547s Selecting previously unselected package python3-dateutil. 547s Preparing to unpack .../074-python3-dateutil_2.9.0-2_all.deb ... 547s Unpacking python3-dateutil (2.9.0-2) ... 547s Selecting previously unselected package python3-numpy. 547s Preparing to unpack .../075-python3-numpy_1%3a1.26.4+ds-10_amd64.deb ... 547s Unpacking python3-numpy (1:1.26.4+ds-10) ... 547s Selecting previously unselected package python3-pandas-lib:amd64. 547s Preparing to unpack .../076-python3-pandas-lib_2.2.2+dfsg-4_amd64.deb ... 547s Unpacking python3-pandas-lib:amd64 (2.2.2+dfsg-4) ... 547s Selecting previously unselected package python3-pandas. 547s Preparing to unpack .../077-python3-pandas_2.2.2+dfsg-4_all.deb ... 547s Unpacking python3-pandas (2.2.2+dfsg-4) ... 548s Selecting previously unselected package python3-greenlet. 548s Preparing to unpack .../078-python3-greenlet_3.0.3-0ubuntu5_amd64.deb ... 548s Unpacking python3-greenlet (3.0.3-0ubuntu5) ... 548s Selecting previously unselected package python3-sqlalchemy. 548s Preparing to unpack .../079-python3-sqlalchemy_1.4.50+ds1-1build1_all.deb ... 548s Unpacking python3-sqlalchemy (1.4.50+ds1-1build1) ... 548s Selecting previously unselected package python3-pyomop. 548s Preparing to unpack .../080-python3-pyomop_4.2.0-2_all.deb ... 548s Unpacking python3-pyomop (4.2.0-2) ... 548s Selecting previously unselected package pyomop. 548s Preparing to unpack .../081-pyomop_4.2.0-2_all.deb ... 548s Unpacking pyomop (4.2.0-2) ... 548s Selecting previously unselected package libjs-mathjax. 548s Preparing to unpack .../082-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 548s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 549s Selecting previously unselected package python-pandas-doc. 549s Preparing to unpack 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552s Selecting previously unselected package python3-docutils. 552s Preparing to unpack .../094-python3-docutils_0.20.1+dfsg-3_all.deb ... 552s Unpacking python3-docutils (0.20.1+dfsg-3) ... 552s Selecting previously unselected package python3-imagesize. 552s Preparing to unpack .../095-python3-imagesize_1.4.1-1_all.deb ... 552s Unpacking python3-imagesize (1.4.1-1) ... 552s Selecting previously unselected package python3-iniconfig. 552s Preparing to unpack .../096-python3-iniconfig_1.1.1-2_all.deb ... 552s Unpacking python3-iniconfig (1.1.1-2) ... 552s Selecting previously unselected package python3-pluggy. 552s Preparing to unpack .../097-python3-pluggy_1.5.0-1_all.deb ... 552s Unpacking python3-pluggy (1.5.0-1) ... 552s Selecting previously unselected package python3-pytest. 552s Preparing to unpack .../098-python3-pytest_7.4.4-1_all.deb ... 552s Unpacking python3-pytest (7.4.4-1) ... 553s Selecting previously unselected package sphinx-common. 553s Preparing to unpack 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553s Unpacking python3-setuptools-scm (8.1.0-1) ... 553s Selecting previously unselected package sphinx-doc. 553s Preparing to unpack .../105-sphinx-doc_7.3.7-3_all.deb ... 553s Unpacking sphinx-doc (7.3.7-3) ... 553s Selecting previously unselected package python-scipy-doc. 553s Preparing to unpack .../106-python-scipy-doc_1.12.0-2_all.deb ... 553s Unpacking python-scipy-doc (1.12.0-2) ... 554s Selecting previously unselected package python3-scipy. 554s Preparing to unpack .../107-python3-scipy_1.12.0-2_amd64.deb ... 554s Unpacking python3-scipy (1.12.0-2) ... 555s Selecting previously unselected package autopkgtest-satdep. 555s Preparing to unpack .../108-1-autopkgtest-satdep.deb ... 555s Unpacking autopkgtest-satdep (0) ... 555s Setting up dh-python (6.20240603) ... 555s Setting up javascript-common (11+nmu1) ... 555s Setting up python3-iniconfig (1.1.1-2) ... 555s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 555s Setting up docutils-doc (0.20.1+dfsg-3) ... 555s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 555s Setting up libjs-popper.js (1.16.1+ds-6) ... 555s Setting up python3-colorama (0.4.6-4) ... 555s Setting up python3-defusedxml (0.7.1-2) ... 555s Setting up libarchive-zip-perl (1.68-1) ... 555s Setting up python3-alabaster (0.7.16-0.1) ... 556s Setting up libdebhelper-perl (13.16ubuntu2) ... 556s Setting up m4 (1.4.19-4build1) ... 556s Setting up python3-all (3.12.3-0ubuntu1) ... 556s Setting up libgomp1:amd64 (14.1.0-1ubuntu1) ... 556s Setting up python3-click (8.1.7-1) ... 556s Setting up fonts-open-sans (1.11-2) ... 556s Setting up python3-wheel (0.43.0-1) ... 556s Setting up help2man (1.49.3) ... 556s Setting up python3-roman (3.3-3) ... 556s Setting up python3-decorator (5.1.1-5) ... 556s Setting up autotools-dev (20220109.1) ... 556s Setting up libblas3:amd64 (3.12.0-3build1) ... 556s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 556s Setting up python3-packaging (24.0-1) ... 556s Setting up gcc-13-base:amd64 (13.2.0-23ubuntu4) ... 556s Setting up python3-pyproject-hooks (1.1.0-1) ... 556s Setting up python3-snowballstemmer (2.2.0-4build1) ... 557s Setting up python3-greenlet (3.0.3-0ubuntu5) ... 557s Setting up libquadmath0:amd64 (14.1.0-1ubuntu1) ... 557s Setting up python3-aiosqlite (0.17.0-2) ... 557s Setting up libmpc3:amd64 (1.3.1-1build1) ... 557s Setting up libatomic1:amd64 (14.1.0-1ubuntu1) ... 557s Setting up autopoint (0.21-14ubuntu2) ... 557s Setting up python3-toml (0.10.2-1) ... 557s Setting up python3-installer (0.7.0+dfsg1-3) ... 557s Setting up libgfortran5:amd64 (14.1.0-1ubuntu1) ... 557s Setting up autoconf (2.71-3) ... 557s Setting up python3-pluggy (1.5.0-1) ... 557s Setting up libubsan1:amd64 (14.1.0-1ubuntu1) ... 557s Setting up dwz (0.15-1build6) ... 557s Setting up libhwasan0:amd64 (14.1.0-1ubuntu1) ... 557s Setting up libasan8:amd64 (14.1.0-1ubuntu1) ... 557s Setting up libjson-perl (4.10000-1) ... 557s Setting up debugedit (1:5.0-5build2) ... 557s Setting up python3-dateutil (2.9.0-2) ... 557s Setting up sgml-base (1.31) ... 557s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 557s Setting up libtsan2:amd64 (14.1.0-1ubuntu1) ... 557s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 557s Setting up libisl23:amd64 (0.26-3build1) ... 557s Setting up python3-build (1.2.1-1) ... 558s Setting up libcc1-0:amd64 (14.1.0-1ubuntu1) ... 558s Setting up liblsan0:amd64 (14.1.0-1ubuntu1) ... 558s Setting up libitm1:amd64 (14.1.0-1ubuntu1) ... 558s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 558s Setting up python3-imagesize (1.4.1-1) ... 558s Setting up python3-commonmark (0.9.1-6) ... 558s Setting up automake (1:1.16.5-1.3ubuntu1) ... 558s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 558s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 558s Setting up liblapack3:amd64 (3.12.0-3build1) ... 558s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 558s Setting up gettext (0.21-14ubuntu2) ... 558s Setting up cpp-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 558s Setting up pybuild-plugin-pyproject (6.20240603) ... 558s Setting up python3-pytest (7.4.4-1) ... 558s Setting up python3-setuptools-scm (8.1.0-1) ... 558s Setting up python3-sqlalchemy (1.4.50+ds1-1build1) ... 559s Setting up intltool-debian (0.35.0+20060710.6) ... 559s Setting up python3-numpy (1:1.26.4+ds-10) ... 561s Setting up libjs-sphinxdoc (7.3.7-3) ... 561s Setting up python-requests-doc (2.32.3+dfsg-1ubuntu1) ... 561s Setting up dh-strip-nondeterminism (1.14.0-1) ... 561s Setting up libgcc-13-dev:amd64 (13.2.0-23ubuntu4) ... 561s Setting up xml-core (0.19) ... 561s Setting up python3.12-doc (3.12.4-1ubuntu1) ... 561s Setting up python3-doc (3.12.3-0ubuntu1) ... 561s Setting up libstdc++-13-dev:amd64 (13.2.0-23ubuntu4) ... 561s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 561s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 561s Setting up sphinx-doc (7.3.7-3) ... 561s Setting up python3-scipy (1.12.0-2) ... 564s Setting up cpp-13 (13.2.0-23ubuntu4) ... 564s Setting up python-pandas-doc (2.2.2+dfsg-4) ... 564s Setting up python-pyomop-doc (4.2.0-2) ... 564s Setting up gcc-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 564s Setting up po-debconf (1.0.21+nmu1) ... 564s Setting up python3-pandas-lib:amd64 (2.2.2+dfsg-4) ... 564s Setting up python-sklearn-doc (1.4.2+dfsg-3) ... 564s Setting up python3-pandas (2.2.2+dfsg-4) ... 569s Setting up sphinx-common (7.3.7-3) ... 569s Setting up python-scipy-doc (1.12.0-2) ... 569s Setting up gcc-13 (13.2.0-23ubuntu4) ... 569s Setting up cpp (4:13.2.0-7ubuntu1) ... 569s Setting up python3-pyomop (4.2.0-2) ... 569s /usr/lib/python3/dist-packages/pyomop/main.py:36: SyntaxWarning: "is not" with 'str' literal. Did you mean "!="? 569s if vocab is not '': 569s Setting up pyomop (4.2.0-2) ... 569s Setting up g++-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 569s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 569s Setting up libtool (2.4.7-7build1) ... 569s Setting up gcc (4:13.2.0-7ubuntu1) ... 569s Setting up dh-autoreconf (20) ... 569s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 569s Setting up g++-13 (13.2.0-23ubuntu4) ... 569s Setting up debhelper (13.16ubuntu2) ... 569s Setting up g++ (4:13.2.0-7ubuntu1) ... 569s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 569s Setting up build-essential (12.10ubuntu1) ... 569s Processing triggers for libc-bin (2.39-0ubuntu9) ... 569s Processing triggers for man-db (2.12.1-2) ... 571s Processing triggers for install-info (7.1-3build2) ... 571s Processing triggers for sgml-base (1.31) ... 571s Setting up docutils-common (0.20.1+dfsg-3) ... 571s Processing triggers for sgml-base (1.31) ... 571s Setting up python3-docutils (0.20.1+dfsg-3) ... 572s Setting up python3-sphinx (7.3.7-3) ... 573s Setting up python3-recommonmark (0.7.1+ds-5) ... 573s /usr/lib/python3/dist-packages/recommonmark/transform.py:254: SyntaxWarning: invalid escape sequence '\w' 573s match = re.search('[ ]?[\w_-]+::.*', language) 573s Setting up autopkgtest-satdep (0) ... 577s (Reading database ... 107310 files and directories currently installed.) 577s Removing autopkgtest-satdep (0) ... 578s autopkgtest [09:11:49]: test upstream: [----------------------- 578s ============================= test session starts ============================== 578s platform linux -- Python 3.12.4, pytest-7.4.4, pluggy-1.5.0 -- /usr/bin/python3.12 578s cachedir: .pytest_cache 578s rootdir: /tmp/autopkgtest.xQyGYj/autopkgtest_tmp 578s configfile: setup.cfg 578s collecting ... collected 6 items 578s 579s tests/test_a_pyomop.py::test_create_cohort PASSED [ 16%] 579s tests/test_ab_vector.py::test_create_patient PASSED [ 33%] 580s tests/test_b_create_vocab.py::test_create_tables PASSED [ 50%] 582s tests/test_b_create_vocab.py::test_create_vocab PASSED [ 66%] 582s tests/test_c_vocab.py::test_vocab PASSED [ 83%] 582s tests/test_d_vector.py::test_create_vector PASSED [100%] 582s 582s =============================== warnings summary =============================== 582s tests/test_a_pyomop.py::test_create_cohort 582s tests/test_a_pyomop.py::test_create_cohort 582s tests/test_ab_vector.py::test_create_patient 582s tests/test_ab_vector.py::test_create_patient 582s tests/test_ab_vector.py::test_create_patient 582s tests/test_ab_vector.py::test_create_patient 582s tests/test_d_vector.py::test_create_vector 582s tests/test_d_vector.py::test_create_vector 582s /usr/lib/python3/dist-packages/aiosqlite/core.py:102: DeprecationWarning: The default datetime adapter is deprecated as of Python 3.12; see the sqlite3 documentation for suggested replacement recipes 582s result = function() 582s 582s tests/test_b_create_vocab.py::test_create_vocab 582s /usr/lib/python3/dist-packages/pyomop/vocabulary.py:133: SAWarning: The garbage collector is trying to clean up connection >. This feature is unsupported on unsupported on asyncio dbapis that lack a "terminate" feature, since no IO can be performed at this stage to reset the connection. Please close out all connections when they are no longer used, calling ``close()`` or using a context manager to manage their lifetime. 582s await conn.run_sync(lambda sync_conn: automap.prepare(autoload_with=sync_conn)) 582s 582s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 582s ======================== 6 passed, 9 warnings in 4.27s ========================= 583s autopkgtest [09:11:54]: test upstream: -----------------------] 583s autopkgtest [09:11:54]: test upstream: - - - - - - - - - - results - - - - - - - - - - 583s upstream PASS 583s autopkgtest [09:11:54]: @@@@@@@@@@@@@@@@@@@@ summary 583s upstream PASS 598s nova [W] Skipping flock for amd64 598s Creating nova instance adt-oracular-amd64-python-pyomop-20240708-090211-juju-7f2275-prod-proposed-migration-environment-2-a5778230-1624-45d1-bbe7-87c231a5cb16 from image adt/ubuntu-oracular-amd64-server-20240707.img (UUID a564d08f-b120-4297-9fe1-fa5551c3a09b)...