0s autopkgtest [00:41:14]: starting date and time: 2024-06-08 00:41:14+0000 0s autopkgtest [00:41:14]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [00:41:14]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.3sojcj8_/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade python-gsd --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-72.secgroup --name adt-oracular-amd64-python-gsd-20240608-004114-juju-7f2275-prod-proposed-migration-environment-2-f57360c2-d588-4b7f-9d2d-40b6b1247167 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 152s autopkgtest [00:43:46]: testbed dpkg architecture: amd64 152s autopkgtest [00:43:46]: testbed apt version: 2.9.3 152s autopkgtest [00:43:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 152s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 152s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2852 B] 152s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 152s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [339 kB] 152s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.3 kB] 152s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [65.6 kB] 152s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [37.8 kB] 152s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [27.4 kB] 152s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [9340 B] 152s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [300 kB] 152s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [124 kB] 152s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [9280 B] 152s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3368 B] 152s Fetched 1081 kB in 0s (4590 kB/s) 152s Reading package lists... 154s Reading package lists... 154s Building dependency tree... 154s Reading state information... 154s Calculating upgrade... 154s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 154s Reading package lists... 155s Building dependency tree... 155s Reading state information... 155s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 155s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 155s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 155s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 155s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 157s Reading package lists... 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s Calculating upgrade... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s autopkgtest [00:43:53]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 159s autopkgtest [00:43:53]: @@@@@@@@@@@@@@@@@@@@ apt-source python-gsd 160s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-gsd 3.0.1-3build2 (dsc) [2383 B] 160s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-gsd 3.0.1-3build2 (tar) [107 kB] 160s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-gsd 3.0.1-3build2 (diff) [5672 B] 160s gpgv: Signature made Wed Apr 10 18:32:12 2024 UTC 160s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 160s gpgv: Can't check signature: No public key 160s dpkg-source: warning: cannot verify inline signature for ./python-gsd_3.0.1-3build2.dsc: no acceptable signature found 160s autopkgtest [00:43:54]: testing package python-gsd version 3.0.1-3build2 160s autopkgtest [00:43:54]: build not needed 160s autopkgtest [00:43:54]: test command1: preparing testbed 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s Starting pkgProblemResolver with broken count: 0 161s Starting 2 pkgProblemResolver with broken count: 0 161s Done 162s The following additional packages will be installed: 162s libblas3 libgfortran5 liblapack3 python3-gsd python3-iniconfig python3-numpy 162s python3-packaging python3-pluggy python3-pytest 162s Suggested packages: 162s python-gsd-doc gcc gfortran python-numpy-doc python3-dev 162s The following NEW packages will be installed: 162s autopkgtest-satdep libblas3 libgfortran5 liblapack3 python3-gsd 162s python3-iniconfig python3-numpy python3-packaging python3-pluggy 162s python3-pytest 162s 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 162s Need to get 8773 kB/8774 kB of archives. 162s After this operation, 38.2 MB of additional disk space will be used. 162s Get:1 /tmp/autopkgtest.uuLNFn/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [716 B] 162s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 162s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-1ubuntu1 [928 kB] 162s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 162s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [4437 kB] 162s Get:6 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-gsd amd64 3.0.1-3build2 [202 kB] 162s Get:7 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 162s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-packaging all 24.0-1 [41.1 kB] 162s Get:9 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 162s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pytest all 8.2.2-1ubuntu1 [250 kB] 162s Fetched 8773 kB in 0s (77.7 MB/s) 162s Selecting previously unselected package libblas3:amd64. 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74365 files and directories currently installed.) 163s Preparing to unpack .../0-libblas3_3.12.0-3build1_amd64.deb ... 163s Unpacking libblas3:amd64 (3.12.0-3build1) ... 163s Selecting previously unselected package libgfortran5:amd64. 163s Preparing to unpack .../1-libgfortran5_14.1.0-1ubuntu1_amd64.deb ... 163s Unpacking libgfortran5:amd64 (14.1.0-1ubuntu1) ... 163s Selecting previously unselected package liblapack3:amd64. 163s Preparing to unpack .../2-liblapack3_3.12.0-3build1_amd64.deb ... 163s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 163s Selecting previously unselected package python3-numpy. 163s Preparing to unpack .../3-python3-numpy_1%3a1.26.4+ds-10_amd64.deb ... 163s Unpacking python3-numpy (1:1.26.4+ds-10) ... 163s Selecting previously unselected package python3-gsd. 163s Preparing to unpack .../4-python3-gsd_3.0.1-3build2_amd64.deb ... 163s Unpacking python3-gsd (3.0.1-3build2) ... 163s Selecting previously unselected package python3-iniconfig. 163s Preparing to unpack .../5-python3-iniconfig_1.1.1-2_all.deb ... 163s Unpacking python3-iniconfig (1.1.1-2) ... 163s Selecting previously unselected package python3-packaging. 163s Preparing to unpack .../6-python3-packaging_24.0-1_all.deb ... 163s Unpacking python3-packaging (24.0-1) ... 163s Selecting previously unselected package python3-pluggy. 163s Preparing to unpack .../7-python3-pluggy_1.5.0-1_all.deb ... 163s Unpacking python3-pluggy (1.5.0-1) ... 163s Selecting previously unselected package python3-pytest. 163s Preparing to unpack .../8-python3-pytest_8.2.2-1ubuntu1_all.deb ... 163s Unpacking python3-pytest (8.2.2-1ubuntu1) ... 163s Selecting previously unselected package autopkgtest-satdep. 163s Preparing to unpack .../9-1-autopkgtest-satdep.deb ... 163s Unpacking autopkgtest-satdep (0) ... 163s Setting up python3-iniconfig (1.1.1-2) ... 163s Setting up libblas3:amd64 (3.12.0-3build1) ... 163s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 163s Setting up python3-packaging (24.0-1) ... 163s Setting up libgfortran5:amd64 (14.1.0-1ubuntu1) ... 163s Setting up python3-pluggy (1.5.0-1) ... 164s Setting up liblapack3:amd64 (3.12.0-3build1) ... 164s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 164s Setting up python3-pytest (8.2.2-1ubuntu1) ... 164s Setting up python3-numpy (1:1.26.4+ds-10) ... 166s Setting up python3-gsd (3.0.1-3build2) ... 166s Setting up autopkgtest-satdep (0) ... 166s Processing triggers for man-db (2.12.1-1) ... 167s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 169s (Reading database ... 75462 files and directories currently installed.) 169s Removing autopkgtest-satdep (0) ... 169s autopkgtest [00:44:03]: test command1: pytest-3 -v /usr/lib/python3/dist-packages/gsd 169s autopkgtest [00:44:03]: test command1: [----------------------- 169s ============================= test session starts ============================== 169s platform linux -- Python 3.12.3, pytest-8.2.2, pluggy-1.5.0 -- /usr/bin/python3 169s cachedir: .pytest_cache 169s rootdir: /usr/lib/python3/dist-packages/gsd 170s collecting ... collected 125 items 170s 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_create[(r,w)] PASSED [ 0%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_create[(a,x)] PASSED [ 1%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_create[(r,a)] PASSED [ 2%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[uint8] PASSED [ 3%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[uint16] PASSED [ 4%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[uint32] PASSED [ 4%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[uint64] PASSED [ 5%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[int8] PASSED [ 6%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[int16] PASSED [ 7%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[int32] PASSED [ 8%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[int64] PASSED [ 8%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[float32] PASSED [ 9%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype[float64] PASSED [ 10%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_metadata[(r,w)] PASSED [ 11%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_metadata[(a,x)] PASSED [ 12%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_metadata[(r,a)] PASSED [ 12%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_append[(r,w)] PASSED [ 13%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_append[(a,x)] PASSED [ 14%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_append[(r,a)] PASSED [ 15%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_exists[(r,w)] PASSED [ 16%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_exists[(a,x)] PASSED [ 16%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_exists[(r,a)] PASSED [ 17%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_readonly_errors[(r,w)] PASSED [ 18%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_readonly_errors[(a,x)] PASSED [ 19%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_readonly_errors[(r,a)] PASSED [ 20%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_fileio_errors[(r,w)] PASSED [ 20%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_fileio_errors[(a,x)] PASSED [ 21%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_fileio_errors[(r,a)] PASSED [ 22%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype_errors[(r,w)] PASSED [ 23%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype_errors[(a,x)] PASSED [ 24%] 170s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_dtype_errors[(r,a)] PASSED [ 24%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_truncate PASSED [ 25%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_namelen[(r,w)] PASSED [ 26%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_namelen[(a,x)] PASSED [ 27%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_namelen[(r,a)] PASSED [ 28%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_open PASSED [ 28%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_find_matching_chunk_names[(r,w)] PASSED [ 29%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_find_matching_chunk_names[(a,x)] PASSED [ 30%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_find_matching_chunk_names[(r,a)] PASSED [ 31%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_name_limit[(r,w)] PASSED [ 32%] 171s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_name_limit[(a,x)] PASSED [ 32%] 172s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_chunk_name_limit[(r,a)] PASSED [ 33%] 173s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_many_names[(r,w)] PASSED [ 34%] 175s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_many_names[(a,x)] PASSED [ 35%] 176s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_many_names[(r,a)] PASSED [ 36%] 176s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_read PASSED [ 36%] 176s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_read[(r,w)] PASSED [ 37%] 176s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_read[(a,x)] PASSED [ 38%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_read[(r,a)] PASSED [ 39%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_write[(r,w)] PASSED [ 40%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_write[(a,x)] PASSED [ 40%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_write[(r,a)] PASSED [ 41%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_write[(r,w)] PASSED [ 42%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_write[(a,x)] PASSED [ 43%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_gsd_v1_upgrade_write[(r,a)] PASSED [ 44%] 177s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_zero_size[(r,w)] PASSED [ 44%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_zero_size[(a,x)] PASSED [ 45%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_zero_size[(r,a)] PASSED [ 46%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_utf8 PASSED [ 47%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_read_write[w] PASSED [ 48%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_read_write[x] PASSED [ 48%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_read_write[a] PASSED [ 49%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_read_write[r+] PASSED [ 50%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,w)-0] PASSED [ 51%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,w)-1] PASSED [ 52%] 178s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,w)-2] PASSED [ 52%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(a,x)-0] PASSED [ 53%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(a,x)-1] PASSED [ 54%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(a,x)-2] PASSED [ 55%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,a)-0] PASSED [ 56%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,a)-1] PASSED [ 56%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_flush[(r,a)-2] PASSED [ 57%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_maximum_write_buffer_size[(r,w)] PASSED [ 58%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_maximum_write_buffer_size[(a,x)] PASSED [ 59%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_maximum_write_buffer_size[(r,a)] PASSED [ 60%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_index_entries_to_buffer[(r,w)] PASSED [ 60%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_index_entries_to_buffer[(a,x)] PASSED [ 61%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_fl.py::test_index_entries_to_buffer[(r,a)] PASSED [ 62%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_create PASSED [ 63%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_append[(r,w)] PASSED [ 64%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_append[(a,x)] PASSED [ 64%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_append[(r,a)] PASSED [ 65%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_extend[(r,w)] PASSED [ 66%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_extend[(a,x)] PASSED [ 67%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_extend[(r,a)] PASSED [ 68%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_defaults[(r,w)] PASSED [ 68%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_defaults[(a,x)] PASSED [ 69%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_defaults[(r,a)] PASSED [ 70%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback[(r,w)] PASSED [ 71%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback[(a,x)] PASSED [ 72%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback[(r,a)] PASSED [ 72%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback_to_frame0[(r,w)] PASSED [ 73%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback_to_frame0[(a,x)] PASSED [ 74%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_fallback_to_frame0[(r,a)] PASSED [ 75%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_fallback[(r,w)] PASSED [ 76%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_fallback[(a,x)] PASSED [ 76%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_fallback[(r,a)] PASSED [ 77%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_iteration[(r,w)] PASSED [ 78%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_iteration[(a,x)] PASSED [ 79%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_iteration[(r,a)] PASSED [ 80%] 179s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_slicing_and_iteration[(r,w)] PASSED [ 80%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_slicing_and_iteration[(a,x)] PASSED [ 81%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_slicing_and_iteration[(r,a)] PASSED [ 82%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_view_slicing_and_iteration[(r,w)] PASSED [ 83%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_view_slicing_and_iteration[(a,x)] PASSED [ 84%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_view_slicing_and_iteration[(r,a)] PASSED [ 84%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_truncate PASSED [ 85%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_state[(r,w)] PASSED [ 86%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_state[(a,x)] PASSED [ 87%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_state[(r,a)] PASSED [ 88%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_log[(r,w)] PASSED [ 88%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_log[(a,x)] PASSED [ 89%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_log[(r,a)] PASSED [ 90%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_pickle PASSED [ 91%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[particles] PASSED [ 92%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[bonds] PASSED [ 92%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[angles] PASSED [ 93%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[dihedrals] PASSED [ 94%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[impropers] PASSED [ 95%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_no_duplicate_types[pairs] PASSED [ 96%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_read_log PASSED [ 96%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_hoomd.py::test_read_log_warning PASSED [ 97%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_largefile.py::test_large_n[134217728] SKIPPED [ 98%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_largefile.py::test_large_n[268435456] SKIPPED [ 99%] 180s ../../../../usr/lib/python3/dist-packages/gsd/test/test_largefile.py::test_large_n[536870913] SKIPPED [100%] 180s 180s =============================== warnings summary =============================== 180s test/test_hoomd.py: 10 warnings 180s /usr/lib/python3/dist-packages/gsd/hoomd.py:1168: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) 180s logged_data_dict[log][idx] = gsdfileobj.read_chunk( 180s 180s ../../../../usr/lib/python3/dist-packages/_pytest/cacheprovider.py:479 180s /usr/lib/python3/dist-packages/_pytest/cacheprovider.py:479: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/gsd/.pytest_cache/v/cache/nodeids: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/gsd/pytest-cache-files-ojk1lfbm' 180s config.cache.set("cache/nodeids", sorted(self.cached_nodeids)) 180s 180s ../../../../usr/lib/python3/dist-packages/_pytest/stepwise.py:57 180s /usr/lib/python3/dist-packages/_pytest/stepwise.py:57: PytestCacheWarning: could not create cache path /usr/lib/python3/dist-packages/gsd/.pytest_cache/v/cache/stepwise: [Errno 13] Permission denied: '/usr/lib/python3/dist-packages/gsd/pytest-cache-files-xe3pgt9f' 180s session.config.cache.set(STEPWISE_CACHE_DIR, []) 180s 180s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 180s ================= 122 passed, 3 skipped, 12 warnings in 10.97s ================= 181s autopkgtest [00:44:15]: test command1: -----------------------] 181s autopkgtest [00:44:15]: test command1: - - - - - - - - - - results - - - - - - - - - - 181s command1 PASS 181s autopkgtest [00:44:15]: @@@@@@@@@@@@@@@@@@@@ summary 181s command1 PASS 195s nova [W] Skipping flock for amd64 195s Creating nova instance adt-oracular-amd64-python-gsd-20240608-004114-juju-7f2275-prod-proposed-migration-environment-2-f57360c2-d588-4b7f-9d2d-40b6b1247167 from image adt/ubuntu-oracular-amd64-server-20240607.img (UUID d996b44c-1e10-4875-aeab-5b4c434d75a2)...