0s autopkgtest [00:41:10]: starting date and time: 2024-06-08 00:41:10+0000 0s autopkgtest [00:41:10]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod' 0s autopkgtest [00:41:10]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lj4hoj95/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade python-griddataformats --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@lcy02-67.secgroup --name adt-oracular-amd64-python-griddataformats-20240608-004110-juju-7f2275-prod-proposed-migration-environment-2-9c4f4feb-1981-46bc-934d-21baaddd1c04 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 102s autopkgtest [00:42:52]: testbed dpkg architecture: amd64 102s autopkgtest [00:42:52]: testbed apt version: 2.9.3 102s autopkgtest [00:42:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup 102s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB] 102s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B] 102s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.3 kB] 102s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [339 kB] 102s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2852 B] 102s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [65.6 kB] 102s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [37.8 kB] 102s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [9340 B] 102s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [27.4 kB] 102s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [124 kB] 102s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [300 kB] 102s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3368 B] 102s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [9280 B] 103s Fetched 1081 kB in 0s (4152 kB/s) 103s Reading package lists... 104s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s Calculating upgrade... 105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 105s Reading package lists... 106s Building dependency tree... 106s Reading state information... 106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease 106s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease 106s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease 106s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease 108s Reading package lists... 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Calculating upgrade... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 110s autopkgtest [00:43:00]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024 110s autopkgtest [00:43:00]: @@@@@@@@@@@@@@@@@@@@ apt-source python-griddataformats 111s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (dsc) [2267 B] 111s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (tar) [2159 kB] 111s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-griddataformats 1.0.2-1 (diff) [3172 B] 111s gpgv: Signature made Thu Jan 18 12:51:40 2024 UTC 111s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 111s gpgv: Can't check signature: No public key 111s dpkg-source: warning: cannot verify inline signature for ./python-griddataformats_1.0.2-1.dsc: no acceptable signature found 111s autopkgtest [00:43:01]: testing package python-griddataformats version 1.0.2-1 111s autopkgtest [00:43:01]: build not needed 112s autopkgtest [00:43:02]: test command1: preparing testbed 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 113s Starting pkgProblemResolver with broken count: 0 113s Starting 2 pkgProblemResolver with broken count: 0 113s Done 113s The following additional packages will be installed: 113s autoconf automake autopoint autotools-dev build-essential cpp cpp-13 113s cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 113s dh-autoreconf dh-python dh-strip-nondeterminism dwz fonts-font-awesome 113s fonts-lato g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 113s gcc-13 gcc-13-base gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext 113s intltool-debian libarchive-zip-perl libasan8 libatomic1 libblas3 libcc1-0 113s libdebhelper-perl libfile-stripnondeterminism-perl libgcc-13-dev 113s libgfortran5 libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery 113s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 113s libquadmath0 libstdc++-13-dev libtool libtsan2 libubsan1 m4 po-debconf 113s python3-all python3-decorator python3-griddataformats python3-iniconfig 113s python3-mrcfile python3-numpy python3-packaging python3-pluggy 113s python3-pytest python3-scipy sphinx-rtd-theme-common 113s Suggested packages: 113s autoconf-archive gnu-standards autoconf-doc cpp-doc gcc-13-locales 113s cpp-13-doc dh-make flit python3-build python3-installer python3-wheel 113s g++-multilib g++-13-multilib gcc-13-doc gcc-multilib manpages-dev flex bison 113s gdb gcc-doc gcc-13-multilib gdb-x86-64-linux-gnu gettext-doc libasprintf-dev 113s libgettextpo-dev libstdc++-13-doc libtool-doc gfortran | fortran95-compiler 113s gcj-jdk m4-doc libmail-box-perl gfortran python-numpy-doc python3-dev 113s python-scipy-doc 113s Recommended packages: 113s libarchive-cpio-perl javascript-common libltdl-dev libmail-sendmail-perl 113s python3-pil 113s The following NEW packages will be installed: 113s autoconf automake autopkgtest-satdep autopoint autotools-dev build-essential 113s cpp cpp-13 cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper debugedit 113s dh-autoreconf dh-python dh-strip-nondeterminism dwz fonts-font-awesome 113s fonts-lato g++ g++-13 g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc 113s gcc-13 gcc-13-base gcc-13-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext 113s intltool-debian libarchive-zip-perl libasan8 libatomic1 libblas3 libcc1-0 113s libdebhelper-perl libfile-stripnondeterminism-perl libgcc-13-dev 113s libgfortran5 libgomp1 libhwasan0 libisl23 libitm1 libjs-jquery 113s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblsan0 libmpc3 113s libquadmath0 libstdc++-13-dev libtool libtsan2 libubsan1 m4 po-debconf 113s python3-all python3-decorator python3-griddataformats python3-iniconfig 113s python3-mrcfile python3-numpy python3-packaging python3-pluggy 113s python3-pytest python3-scipy sphinx-rtd-theme-common 113s 0 upgraded, 67 newly installed, 0 to remove and 0 not upgraded. 113s Need to get 97.8 MB/97.8 MB of archives. 113s After this operation, 353 MB of additional disk space will be used. 113s Get:1 /tmp/autopkgtest.MZu9OI/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [804 B] 113s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 fonts-lato all 2.015-1 [2781 kB] 113s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 m4 amd64 1.4.19-4build1 [244 kB] 113s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 autoconf all 2.71-3 [339 kB] 113s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 autotools-dev all 20220109.1 [44.9 kB] 113s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 automake all 1:1.16.5-1.3ubuntu1 [558 kB] 113s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 autopoint all 0.21-14ubuntu2 [422 kB] 113s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13-base amd64 13.2.0-23ubuntu4 [49.0 kB] 113s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 libisl23 amd64 0.26-3build1 [680 kB] 113s Get:10 http://ftpmaster.internal/ubuntu oracular/main amd64 libmpc3 amd64 1.3.1-1build1 [54.5 kB] 113s Get:11 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [11.2 MB] 113s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-13 amd64 13.2.0-23ubuntu4 [1032 B] 113s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [5326 B] 113s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 cpp amd64 4:13.2.0-7ubuntu1 [22.4 kB] 113s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libcc1-0 amd64 14.1.0-1ubuntu1 [48.0 kB] 113s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libgomp1 amd64 14.1.0-1ubuntu1 [148 kB] 113s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 libitm1 amd64 14.1.0-1ubuntu1 [29.1 kB] 113s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 libatomic1 amd64 14.1.0-1ubuntu1 [10.4 kB] 113s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 libasan8 amd64 14.1.0-1ubuntu1 [3025 kB] 114s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 liblsan0 amd64 14.1.0-1ubuntu1 [1313 kB] 114s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 libtsan2 amd64 14.1.0-1ubuntu1 [2736 kB] 114s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libubsan1 amd64 14.1.0-1ubuntu1 [1174 kB] 114s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libhwasan0 amd64 14.1.0-1ubuntu1 [1632 kB] 114s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libquadmath0 amd64 14.1.0-1ubuntu1 [153 kB] 114s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libgcc-13-dev amd64 13.2.0-23ubuntu4 [2688 kB] 114s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [21.9 MB] 114s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-13 amd64 13.2.0-23ubuntu4 [482 kB] 114s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [1212 B] 114s Get:29 http://ftpmaster.internal/ubuntu oracular/main amd64 gcc amd64 4:13.2.0-7ubuntu1 [5018 B] 114s Get:30 http://ftpmaster.internal/ubuntu oracular/main amd64 libstdc++-13-dev amd64 13.2.0-23ubuntu4 [2399 kB] 114s Get:31 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-13-x86-64-linux-gnu amd64 13.2.0-23ubuntu4 [12.5 MB] 114s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-13 amd64 13.2.0-23ubuntu4 [14.5 kB] 114s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 g++-x86-64-linux-gnu amd64 4:13.2.0-7ubuntu1 [964 B] 114s Get:34 http://ftpmaster.internal/ubuntu oracular/main amd64 g++ amd64 4:13.2.0-7ubuntu1 [1100 B] 114s Get:35 http://ftpmaster.internal/ubuntu oracular/main amd64 build-essential amd64 12.10ubuntu1 [4928 B] 114s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 libdebhelper-perl all 13.14.1ubuntu5 [89.8 kB] 114s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 libtool all 2.4.7-7build1 [166 kB] 114s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 dh-autoreconf all 20 [16.1 kB] 114s Get:39 http://ftpmaster.internal/ubuntu oracular/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 114s Get:40 http://ftpmaster.internal/ubuntu oracular/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [20.1 kB] 114s Get:41 http://ftpmaster.internal/ubuntu oracular/main amd64 dh-strip-nondeterminism all 1.14.0-1 [5058 B] 114s Get:42 http://ftpmaster.internal/ubuntu oracular/main amd64 debugedit amd64 1:5.0-5build2 [46.1 kB] 114s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 dwz amd64 0.15-1build6 [115 kB] 114s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 gettext amd64 0.21-14ubuntu2 [864 kB] 114s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] 114s Get:46 http://ftpmaster.internal/ubuntu oracular/main amd64 po-debconf all 1.0.21+nmu1 [233 kB] 114s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 debhelper all 13.14.1ubuntu5 [869 kB] 114s Get:48 http://ftpmaster.internal/ubuntu oracular/universe amd64 dh-python all 6.20240422 [110 kB] 114s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 114s Get:50 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB] 114s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-1ubuntu1 [928 kB] 114s Get:52 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 114s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 114s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] 114s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB] 114s Get:56 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 114s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-all amd64 3.12.3-0ubuntu1 [888 B] 114s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-decorator all 5.1.1-5 [10.1 kB] 114s Get:59 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [4437 kB] 114s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 sphinx-rtd-theme-common all 2.0.0+dfsg-1 [1012 kB] 114s Get:61 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-mrcfile all 1.4.3-3 [110 kB] 114s Get:62 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-scipy amd64 1.11.4-10 [15.5 MB] 114s Get:63 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-griddataformats all 1.0.2-1 [2101 kB] 114s Get:64 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 114s Get:65 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-packaging all 24.0-1 [41.1 kB] 114s Get:66 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 114s Get:67 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pytest all 8.2.2-1ubuntu1 [250 kB] 115s Fetched 97.8 MB in 1s (121 MB/s) 115s Selecting previously unselected package fonts-lato. 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 74365 files and directories currently installed.) 115s Preparing to unpack .../00-fonts-lato_2.015-1_all.deb ... 115s Unpacking fonts-lato (2.015-1) ... 115s Selecting previously unselected package m4. 115s Preparing to unpack .../01-m4_1.4.19-4build1_amd64.deb ... 115s Unpacking m4 (1.4.19-4build1) ... 115s Selecting previously unselected package autoconf. 115s Preparing to unpack .../02-autoconf_2.71-3_all.deb ... 115s Unpacking autoconf (2.71-3) ... 115s Selecting previously unselected package autotools-dev. 115s Preparing to unpack .../03-autotools-dev_20220109.1_all.deb ... 115s Unpacking autotools-dev (20220109.1) ... 115s Selecting previously unselected package automake. 115s Preparing to unpack .../04-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 115s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 115s Selecting previously unselected package autopoint. 115s Preparing to unpack .../05-autopoint_0.21-14ubuntu2_all.deb ... 115s Unpacking autopoint (0.21-14ubuntu2) ... 115s Selecting previously unselected package gcc-13-base:amd64. 115s Preparing to unpack .../06-gcc-13-base_13.2.0-23ubuntu4_amd64.deb ... 115s Unpacking gcc-13-base:amd64 (13.2.0-23ubuntu4) ... 116s Selecting previously unselected package libisl23:amd64. 116s Preparing to unpack .../07-libisl23_0.26-3build1_amd64.deb ... 116s Unpacking libisl23:amd64 (0.26-3build1) ... 116s Selecting previously unselected package libmpc3:amd64. 116s Preparing to unpack .../08-libmpc3_1.3.1-1build1_amd64.deb ... 116s Unpacking libmpc3:amd64 (1.3.1-1build1) ... 116s Selecting previously unselected package cpp-13-x86-64-linux-gnu. 116s Preparing to unpack .../09-cpp-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 116s Unpacking cpp-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 116s Selecting previously unselected package cpp-13. 116s Preparing to unpack .../10-cpp-13_13.2.0-23ubuntu4_amd64.deb ... 116s Unpacking cpp-13 (13.2.0-23ubuntu4) ... 116s Selecting previously unselected package cpp-x86-64-linux-gnu. 116s Preparing to unpack .../11-cpp-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 116s Unpacking cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 116s Selecting previously unselected package cpp. 116s Preparing to unpack .../12-cpp_4%3a13.2.0-7ubuntu1_amd64.deb ... 116s Unpacking cpp (4:13.2.0-7ubuntu1) ... 116s Selecting previously unselected package libcc1-0:amd64. 116s Preparing to unpack .../13-libcc1-0_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libcc1-0:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libgomp1:amd64. 116s Preparing to unpack .../14-libgomp1_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libgomp1:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libitm1:amd64. 116s Preparing to unpack .../15-libitm1_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libitm1:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libatomic1:amd64. 116s Preparing to unpack .../16-libatomic1_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libatomic1:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libasan8:amd64. 116s Preparing to unpack .../17-libasan8_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libasan8:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package liblsan0:amd64. 116s Preparing to unpack .../18-liblsan0_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking liblsan0:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libtsan2:amd64. 116s Preparing to unpack .../19-libtsan2_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libtsan2:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libubsan1:amd64. 116s Preparing to unpack .../20-libubsan1_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libubsan1:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libhwasan0:amd64. 116s Preparing to unpack .../21-libhwasan0_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libhwasan0:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libquadmath0:amd64. 116s Preparing to unpack .../22-libquadmath0_14.1.0-1ubuntu1_amd64.deb ... 116s Unpacking libquadmath0:amd64 (14.1.0-1ubuntu1) ... 116s Selecting previously unselected package libgcc-13-dev:amd64. 116s Preparing to unpack .../23-libgcc-13-dev_13.2.0-23ubuntu4_amd64.deb ... 116s Unpacking libgcc-13-dev:amd64 (13.2.0-23ubuntu4) ... 116s Selecting previously unselected package gcc-13-x86-64-linux-gnu. 116s Preparing to unpack .../24-gcc-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 116s Unpacking gcc-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 117s Selecting previously unselected package gcc-13. 117s Preparing to unpack .../25-gcc-13_13.2.0-23ubuntu4_amd64.deb ... 117s Unpacking gcc-13 (13.2.0-23ubuntu4) ... 117s Selecting previously unselected package gcc-x86-64-linux-gnu. 117s Preparing to unpack .../26-gcc-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 117s Unpacking gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 117s Selecting previously unselected package gcc. 117s Preparing to unpack .../27-gcc_4%3a13.2.0-7ubuntu1_amd64.deb ... 117s Unpacking gcc (4:13.2.0-7ubuntu1) ... 117s Selecting previously unselected package libstdc++-13-dev:amd64. 117s Preparing to unpack .../28-libstdc++-13-dev_13.2.0-23ubuntu4_amd64.deb ... 117s Unpacking libstdc++-13-dev:amd64 (13.2.0-23ubuntu4) ... 117s Selecting previously unselected package g++-13-x86-64-linux-gnu. 117s Preparing to unpack .../29-g++-13-x86-64-linux-gnu_13.2.0-23ubuntu4_amd64.deb ... 117s Unpacking g++-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 117s Selecting previously unselected package g++-13. 117s Preparing to unpack .../30-g++-13_13.2.0-23ubuntu4_amd64.deb ... 117s Unpacking g++-13 (13.2.0-23ubuntu4) ... 117s Selecting previously unselected package g++-x86-64-linux-gnu. 117s Preparing to unpack .../31-g++-x86-64-linux-gnu_4%3a13.2.0-7ubuntu1_amd64.deb ... 117s Unpacking g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 117s Selecting previously unselected package g++. 117s Preparing to unpack .../32-g++_4%3a13.2.0-7ubuntu1_amd64.deb ... 117s Unpacking g++ (4:13.2.0-7ubuntu1) ... 117s Selecting previously unselected package build-essential. 117s Preparing to unpack .../33-build-essential_12.10ubuntu1_amd64.deb ... 117s Unpacking build-essential (12.10ubuntu1) ... 117s Selecting previously unselected package libdebhelper-perl. 117s Preparing to unpack .../34-libdebhelper-perl_13.14.1ubuntu5_all.deb ... 117s Unpacking libdebhelper-perl (13.14.1ubuntu5) ... 118s Selecting previously unselected package libtool. 118s Preparing to unpack .../35-libtool_2.4.7-7build1_all.deb ... 118s Unpacking libtool (2.4.7-7build1) ... 118s Selecting previously unselected package dh-autoreconf. 118s Preparing to unpack .../36-dh-autoreconf_20_all.deb ... 118s Unpacking dh-autoreconf (20) ... 118s Selecting previously unselected package libarchive-zip-perl. 118s Preparing to unpack .../37-libarchive-zip-perl_1.68-1_all.deb ... 118s Unpacking libarchive-zip-perl (1.68-1) ... 118s Selecting previously unselected package libfile-stripnondeterminism-perl. 118s Preparing to unpack .../38-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... 118s Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... 118s Selecting previously unselected package dh-strip-nondeterminism. 118s Preparing to unpack .../39-dh-strip-nondeterminism_1.14.0-1_all.deb ... 118s Unpacking dh-strip-nondeterminism (1.14.0-1) ... 118s Selecting previously unselected package debugedit. 118s Preparing to unpack .../40-debugedit_1%3a5.0-5build2_amd64.deb ... 118s Unpacking debugedit (1:5.0-5build2) ... 118s Selecting previously unselected package dwz. 118s Preparing to unpack .../41-dwz_0.15-1build6_amd64.deb ... 118s Unpacking dwz (0.15-1build6) ... 118s Selecting previously unselected package gettext. 118s Preparing to unpack .../42-gettext_0.21-14ubuntu2_amd64.deb ... 118s Unpacking gettext (0.21-14ubuntu2) ... 118s Selecting previously unselected package intltool-debian. 118s Preparing to unpack .../43-intltool-debian_0.35.0+20060710.6_all.deb ... 118s Unpacking intltool-debian (0.35.0+20060710.6) ... 118s Selecting previously unselected package po-debconf. 118s Preparing to unpack .../44-po-debconf_1.0.21+nmu1_all.deb ... 118s Unpacking po-debconf (1.0.21+nmu1) ... 118s Selecting previously unselected package debhelper. 118s Preparing to unpack .../45-debhelper_13.14.1ubuntu5_all.deb ... 118s Unpacking debhelper (13.14.1ubuntu5) ... 118s Selecting previously unselected package dh-python. 118s Preparing to unpack .../46-dh-python_6.20240422_all.deb ... 118s Unpacking dh-python (6.20240422) ... 118s Selecting previously unselected package fonts-font-awesome. 118s Preparing to unpack .../47-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 118s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 118s Selecting previously unselected package libblas3:amd64. 118s Preparing to unpack .../48-libblas3_3.12.0-3build1_amd64.deb ... 118s Unpacking libblas3:amd64 (3.12.0-3build1) ... 118s Selecting previously unselected package libgfortran5:amd64. 118s Preparing to unpack .../49-libgfortran5_14.1.0-1ubuntu1_amd64.deb ... 118s Unpacking libgfortran5:amd64 (14.1.0-1ubuntu1) ... 118s Selecting previously unselected package libjs-jquery. 118s Preparing to unpack .../50-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 118s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 118s Selecting previously unselected package libjs-underscore. 118s Preparing to unpack .../51-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 118s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 118s Selecting previously unselected package libjs-sphinxdoc. 118s Preparing to unpack .../52-libjs-sphinxdoc_7.2.6-8_all.deb ... 118s Unpacking libjs-sphinxdoc (7.2.6-8) ... 118s Selecting previously unselected package liblapack3:amd64. 118s Preparing to unpack .../53-liblapack3_3.12.0-3build1_amd64.deb ... 118s Unpacking liblapack3:amd64 (3.12.0-3build1) ... 118s Selecting previously unselected package liblbfgsb0:amd64. 118s Preparing to unpack .../54-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 118s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 118s Selecting previously unselected package python3-all. 118s Preparing to unpack .../55-python3-all_3.12.3-0ubuntu1_amd64.deb ... 118s Unpacking python3-all (3.12.3-0ubuntu1) ... 118s Selecting previously unselected package python3-decorator. 118s Preparing to unpack .../56-python3-decorator_5.1.1-5_all.deb ... 118s Unpacking python3-decorator (5.1.1-5) ... 118s Selecting previously unselected package python3-numpy. 118s Preparing to unpack .../57-python3-numpy_1%3a1.26.4+ds-10_amd64.deb ... 118s Unpacking python3-numpy (1:1.26.4+ds-10) ... 119s Selecting previously unselected package sphinx-rtd-theme-common. 119s Preparing to unpack .../58-sphinx-rtd-theme-common_2.0.0+dfsg-1_all.deb ... 119s Unpacking sphinx-rtd-theme-common (2.0.0+dfsg-1) ... 119s Selecting previously unselected package python3-mrcfile. 119s Preparing to unpack .../59-python3-mrcfile_1.4.3-3_all.deb ... 119s Unpacking python3-mrcfile (1.4.3-3) ... 119s Selecting previously unselected package python3-scipy. 119s Preparing to unpack .../60-python3-scipy_1.11.4-10_amd64.deb ... 119s Unpacking python3-scipy (1.11.4-10) ... 119s Selecting previously unselected package python3-griddataformats. 119s Preparing to unpack .../61-python3-griddataformats_1.0.2-1_all.deb ... 119s Unpacking python3-griddataformats (1.0.2-1) ... 119s Selecting previously unselected package python3-iniconfig. 119s Preparing to unpack .../62-python3-iniconfig_1.1.1-2_all.deb ... 119s Unpacking python3-iniconfig (1.1.1-2) ... 119s Selecting previously unselected package python3-packaging. 119s Preparing to unpack .../63-python3-packaging_24.0-1_all.deb ... 119s Unpacking python3-packaging (24.0-1) ... 119s Selecting previously unselected package python3-pluggy. 119s Preparing to unpack .../64-python3-pluggy_1.5.0-1_all.deb ... 119s Unpacking python3-pluggy (1.5.0-1) ... 119s Selecting previously unselected package python3-pytest. 119s Preparing to unpack .../65-python3-pytest_8.2.2-1ubuntu1_all.deb ... 119s Unpacking python3-pytest (8.2.2-1ubuntu1) ... 119s Selecting previously unselected package autopkgtest-satdep. 119s Preparing to unpack .../66-1-autopkgtest-satdep.deb ... 119s Unpacking autopkgtest-satdep (0) ... 119s Setting up dh-python (6.20240422) ... 120s Setting up python3-iniconfig (1.1.1-2) ... 120s Setting up fonts-lato (2.015-1) ... 120s Setting up libarchive-zip-perl (1.68-1) ... 120s Setting up libdebhelper-perl (13.14.1ubuntu5) ... 120s Setting up m4 (1.4.19-4build1) ... 120s Setting up python3-all (3.12.3-0ubuntu1) ... 120s Setting up libgomp1:amd64 (14.1.0-1ubuntu1) ... 120s Setting up python3-decorator (5.1.1-5) ... 120s Setting up autotools-dev (20220109.1) ... 120s Setting up libblas3:amd64 (3.12.0-3build1) ... 120s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 120s Setting up python3-packaging (24.0-1) ... 120s Setting up gcc-13-base:amd64 (13.2.0-23ubuntu4) ... 120s Setting up libquadmath0:amd64 (14.1.0-1ubuntu1) ... 120s Setting up libmpc3:amd64 (1.3.1-1build1) ... 120s Setting up libatomic1:amd64 (14.1.0-1ubuntu1) ... 120s Setting up autopoint (0.21-14ubuntu2) ... 120s Setting up libgfortran5:amd64 (14.1.0-1ubuntu1) ... 120s Setting up autoconf (2.71-3) ... 120s Setting up python3-pluggy (1.5.0-1) ... 120s Setting up libubsan1:amd64 (14.1.0-1ubuntu1) ... 120s Setting up dwz (0.15-1build6) ... 120s Setting up libhwasan0:amd64 (14.1.0-1ubuntu1) ... 120s Setting up libasan8:amd64 (14.1.0-1ubuntu1) ... 120s Setting up debugedit (1:5.0-5build2) ... 120s Setting up libtsan2:amd64 (14.1.0-1ubuntu1) ... 120s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 120s Setting up libisl23:amd64 (0.26-3build1) ... 120s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 120s Setting up sphinx-rtd-theme-common (2.0.0+dfsg-1) ... 120s Setting up libcc1-0:amd64 (14.1.0-1ubuntu1) ... 120s Setting up liblsan0:amd64 (14.1.0-1ubuntu1) ... 120s Setting up libitm1:amd64 (14.1.0-1ubuntu1) ... 120s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 120s Setting up automake (1:1.16.5-1.3ubuntu1) ... 120s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 120s Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... 120s Setting up liblapack3:amd64 (3.12.0-3build1) ... 120s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 120s Setting up gettext (0.21-14ubuntu2) ... 120s Setting up cpp-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 120s Setting up python3-pytest (8.2.2-1ubuntu1) ... 121s Setting up intltool-debian (0.35.0+20060710.6) ... 121s Setting up python3-numpy (1:1.26.4+ds-10) ... 123s Setting up libjs-sphinxdoc (7.2.6-8) ... 123s Setting up dh-strip-nondeterminism (1.14.0-1) ... 123s Setting up libgcc-13-dev:amd64 (13.2.0-23ubuntu4) ... 123s Setting up libstdc++-13-dev:amd64 (13.2.0-23ubuntu4) ... 123s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 123s Setting up python3-mrcfile (1.4.3-3) ... 123s Setting up cpp-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 123s Setting up python3-scipy (1.11.4-10) ... 126s Setting up cpp-13 (13.2.0-23ubuntu4) ... 126s Setting up gcc-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 126s Setting up po-debconf (1.0.21+nmu1) ... 126s Setting up python3-griddataformats (1.0.2-1) ... 126s Setting up gcc-13 (13.2.0-23ubuntu4) ... 126s Setting up cpp (4:13.2.0-7ubuntu1) ... 126s Setting up g++-13-x86-64-linux-gnu (13.2.0-23ubuntu4) ... 126s Setting up gcc-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 126s Setting up libtool (2.4.7-7build1) ... 126s Setting up gcc (4:13.2.0-7ubuntu1) ... 126s Setting up dh-autoreconf (20) ... 126s Setting up g++-x86-64-linux-gnu (4:13.2.0-7ubuntu1) ... 126s Setting up g++-13 (13.2.0-23ubuntu4) ... 126s Setting up debhelper (13.14.1ubuntu5) ... 126s Setting up g++ (4:13.2.0-7ubuntu1) ... 126s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 126s Setting up build-essential (12.10ubuntu1) ... 126s Setting up autopkgtest-satdep (0) ... 126s Processing triggers for man-db (2.12.1-1) ... 127s Processing triggers for install-info (7.1-3build2) ... 128s Processing triggers for libc-bin (2.39-0ubuntu8.1) ... 130s (Reading database ... 79468 files and directories currently installed.) 130s Removing autopkgtest-satdep (0) ... 130s autopkgtest [00:43:20]: test command1: for py3 in `py3versions -s`; do $py3 -m pytest -v; done 130s autopkgtest [00:43:20]: test command1: [----------------------- 131s ============================= test session starts ============================== 131s platform linux -- Python 3.12.3, pytest-8.2.2, pluggy-1.5.0 -- /usr/bin/python3.12 131s cachedir: .pytest_cache 131s rootdir: /tmp/autopkgtest.MZu9OI/build.fXx/src 131s collecting ... collected 106 items 131s 131s gridData/tests/test_dx.py::test_read_dx[infile0] PASSED [ 0%] 131s gridData/tests/test_dx.py::test_read_dx[infile1] PASSED [ 1%] 131s gridData/tests/test_dx.py::test_write_dx[float16-float-grid.dx] PASSED [ 2%] 131s gridData/tests/test_dx.py::test_write_dx[float16-float-grid.dx.gz] PASSED [ 3%] 131s gridData/tests/test_dx.py::test_write_dx[float32-float-grid.dx] PASSED [ 4%] 131s gridData/tests/test_dx.py::test_write_dx[float32-float-grid.dx.gz] PASSED [ 5%] 131s gridData/tests/test_dx.py::test_write_dx[float64-double-grid.dx] PASSED [ 6%] 131s gridData/tests/test_dx.py::test_write_dx[float64-double-grid.dx.gz] PASSED [ 7%] 131s gridData/tests/test_dx.py::test_write_dx[int64-int-grid.dx] PASSED [ 8%] 131s gridData/tests/test_dx.py::test_write_dx[int64-int-grid.dx.gz] PASSED [ 9%] 131s gridData/tests/test_dx.py::test_write_dx[int32-int-grid.dx] PASSED [ 10%] 131s gridData/tests/test_dx.py::test_write_dx[int32-int-grid.dx.gz] PASSED [ 11%] 131s gridData/tests/test_dx.py::test_write_dx[uint32-unsigned int-grid.dx] PASSED [ 12%] 131s gridData/tests/test_dx.py::test_write_dx[uint32-unsigned int-grid.dx.gz] PASSED [ 13%] 131s gridData/tests/test_dx.py::test_write_dx[uint64-unsigned int-grid.dx] PASSED [ 14%] 131s gridData/tests/test_dx.py::test_write_dx[uint64-unsigned int-grid.dx.gz] PASSED [ 15%] 131s gridData/tests/test_dx.py::test_write_dx[int16-short-grid.dx] PASSED [ 16%] 131s gridData/tests/test_dx.py::test_write_dx[int16-short-grid.dx.gz] PASSED [ 16%] 131s gridData/tests/test_dx.py::test_write_dx[uint16-unsigned short-grid.dx] PASSED [ 17%] 131s gridData/tests/test_dx.py::test_write_dx[uint16-unsigned short-grid.dx.gz] PASSED [ 18%] 131s gridData/tests/test_dx.py::test_write_dx[int8-signed byte-grid.dx] PASSED [ 19%] 131s gridData/tests/test_dx.py::test_write_dx[int8-signed byte-grid.dx.gz] PASSED [ 20%] 131s gridData/tests/test_dx.py::test_write_dx[uint8-byte-grid.dx] PASSED [ 21%] 131s gridData/tests/test_dx.py::test_write_dx[uint8-byte-grid.dx.gz] PASSED [ 22%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[complex64-grid.dx] PASSED [ 23%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[complex64-grid.dx.gz] PASSED [ 24%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[complex128-grid.dx] PASSED [ 25%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[complex128-grid.dx.gz] PASSED [ 26%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[bool_-grid.dx] PASSED [ 27%] 131s gridData/tests/test_dx.py::test_write_dx_ValueError[bool_-grid.dx.gz] PASSED [ 28%] 131s gridData/tests/test_dx.py::test_delta_precision PASSED [ 29%] 131s gridData/tests/test_gOpenMol.py::test_gOpenMol PASSED [ 30%] 131s gridData/tests/test_grid.py::TestGrid::test_init PASSED [ 31%] 131s gridData/tests/test_grid.py::TestGrid::test_init_wrong_origin PASSED [ 32%] 131s gridData/tests/test_grid.py::TestGrid::test_init_wrong_delta PASSED [ 33%] 131s gridData/tests/test_grid.py::TestGrid::test_empty_Grid PASSED [ 33%] 131s gridData/tests/test_grid.py::TestGrid::test_init_missing_delta_ValueError PASSED [ 34%] 131s gridData/tests/test_grid.py::TestGrid::test_init_missing_origin_ValueError PASSED [ 35%] 131s gridData/tests/test_grid.py::TestGrid::test_init_wrong_data_exception PASSED [ 36%] 131s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat_ValueError PASSED [ 37%] 131s gridData/tests/test_grid.py::TestGrid::test_equality PASSED [ 38%] 131s gridData/tests/test_grid.py::TestGrid::test_addition PASSED [ 39%] 131s gridData/tests/test_grid.py::TestGrid::test_subtraction PASSED [ 40%] 131s gridData/tests/test_grid.py::TestGrid::test_multiplication PASSED [ 41%] 131s gridData/tests/test_grid.py::TestGrid::test_division PASSED [ 42%] 131s gridData/tests/test_grid.py::TestGrid::test_floordivision PASSED [ 43%] 131s gridData/tests/test_grid.py::TestGrid::test_power PASSED [ 44%] 131s gridData/tests/test_grid.py::TestGrid::test_compatibility_type PASSED [ 45%] 131s gridData/tests/test_grid.py::TestGrid::test_wrong_compatibile_type PASSED [ 46%] 131s gridData/tests/test_grid.py::TestGrid::test_non_orthonormal_boxes PASSED [ 47%] 131s gridData/tests/test_grid.py::TestGrid::test_centers PASSED [ 48%] 131s gridData/tests/test_grid.py::TestGrid::test_resample_factor_failure PASSED [ 49%] 131s gridData/tests/test_grid.py::TestGrid::test_resample_factor PASSED [ 50%] 131s gridData/tests/test_grid.py::TestGrid::test_load_pickle PASSED [ 50%] 131s gridData/tests/test_grid.py::TestGrid::test_init_pickle_pathobjects PASSED [ 51%] 131s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[pkl] PASSED [ 52%] 131s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[PKL] PASSED [ 53%] 131s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[pickle] PASSED [ 54%] 131s gridData/tests/test_grid.py::TestGrid::test_load_fileformat[python] PASSED [ 55%] 131s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[ccp4] XFAIL [ 56%] 131s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[plt] XFAIL [ 57%] 131s gridData/tests/test_grid.py::TestGrid::test_load_wrong_fileformat[dx] XFAIL [ 58%] 131s gridData/tests/test_grid.py::TestGrid::test_export[dx] PASSED [ 59%] 131s gridData/tests/test_grid.py::TestGrid::test_export[pkl] PASSED [ 60%] 131s gridData/tests/test_grid.py::TestGrid::test_export_not_supported[ccp4] PASSED [ 61%] 131s gridData/tests/test_grid.py::TestGrid::test_export_not_supported[plt] PASSED [ 62%] 131s gridData/tests/test_grid.py::test_inheritance PASSED [ 63%] 131s gridData/tests/test_grid.py::test_anyarray PASSED [ 64%] 131s gridData/tests/test_mrc.py::test_ccp4_Grid PASSED [ 65%] 131s gridData/tests/test_mrc.py::test_ccp4_mrc PASSED [ 66%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nx-96] PASSED [ 66%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[ny-76] PASSED [ 67%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nz-70] PASSED [ 68%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[mode-2] PASSED [ 69%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nxstart--4] PASSED [ 70%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nystart--23] PASSED [ 71%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nzstart-102] PASSED [ 72%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[mx-84] PASSED [ 73%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[my-84] PASSED [ 74%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[mz-160] PASSED [ 75%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[cella-recarray] PASSED [ 76%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[cellb-recarray] PASSED [ 77%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[mapc-2] PASSED [ 78%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[mapr-1] PASSED [ 79%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[maps-3] PASSED [ 80%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[dmin--0.9930942058563232] PASSED [ 81%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[dmax-9.050403594970703] PASSED [ 82%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[dmean--0.0005801090155728161] PASSED [ 83%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[ispg-92] PASSED [ 83%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nsymbt-640] PASSED [ 84%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nversion-0] PASSED [ 85%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[origin-recarray] PASSED [ 86%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[map-MAP ] PASSED [ 87%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[machst-value23] PASSED [ 88%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[rms-0.40349153] PASSED [ 89%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[nlabl-1] PASSED [ 90%] 131s gridData/tests/test_mrc.py::test_ccp4_read_header[label-value26] PASSED [ 91%] 131s gridData/tests/test_mrc.py::test_axes_orientation PASSED [ 92%] 131s gridData/tests/test_mrc.py::test_delta PASSED [ 93%] 131s gridData/tests/test_mrc.py::test_origin PASSED [ 94%] 132s gridData/tests/test_mrc.py::test_triclinic_ValueError PASSED [ 95%] 132s gridData/tests/test_mrc.py::TestGridMRC::test_shape PASSED [ 96%] 132s gridData/tests/test_mrc.py::TestGridMRC::test_mrc_header PASSED [ 97%] 132s gridData/tests/test_mrc.py::TestGridMRC::test_delta PASSED [ 98%] 132s gridData/tests/test_mrc.py::TestGridMRC::test_origin PASSED [ 99%] 132s gridData/tests/test_mrc.py::TestGridMRC::test_data PASSED [100%] 132s 132s ======================== 103 passed, 3 xfailed in 0.82s ======================== 132s autopkgtest [00:43:22]: test command1: -----------------------] 132s autopkgtest [00:43:22]: test command1: - - - - - - - - - - results - - - - - - - - - - 132s command1 PASS 132s autopkgtest [00:43:22]: @@@@@@@@@@@@@@@@@@@@ summary 132s command1 PASS 143s nova [W] Skipping flock for amd64 143s Creating nova instance adt-oracular-amd64-python-griddataformats-20240608-004110-juju-7f2275-prod-proposed-migration-environment-2-9c4f4feb-1981-46bc-934d-21baaddd1c04 from image adt/ubuntu-oracular-amd64-server-20240607.img (UUID d996b44c-1e10-4875-aeab-5b4c434d75a2)...