0s autopkgtest [00:32:51]: starting date and time: 2024-06-08 00:32:51+0000
  0s autopkgtest [00:32:51]: git checkout: 433ed4cb Merge branch 'skia/nova_flock' into 'ubuntu/5.34+prod'
  0s autopkgtest [00:32:51]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wrtcut17/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:astropy --apt-upgrade python-bayespy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.2.2-1ubuntu1 astropy/6.0.1-4' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@lcy02-36.secgroup --name adt-oracular-amd64-python-bayespy-20240608-003251-juju-7f2275-prod-proposed-migration-environment-3-72480b41-32f0-466d-b3ac-2473a4014975 --image adt/ubuntu-oracular-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
146s autopkgtest [00:35:17]: testbed dpkg architecture: amd64
146s autopkgtest [00:35:17]: testbed apt version: 2.9.3
146s autopkgtest [00:35:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup
146s Get:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease [110 kB]
146s Get:2 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse Sources [2852 B]
147s Get:3 http://ftpmaster.internal/ubuntu oracular-proposed/restricted Sources [7972 B]
147s Get:4 http://ftpmaster.internal/ubuntu oracular-proposed/universe Sources [339 kB]
147s Get:5 http://ftpmaster.internal/ubuntu oracular-proposed/main Sources [44.3 kB]
147s Get:6 http://ftpmaster.internal/ubuntu oracular-proposed/main i386 Packages [37.8 kB]
147s Get:7 http://ftpmaster.internal/ubuntu oracular-proposed/main amd64 Packages [65.6 kB]
147s Get:8 http://ftpmaster.internal/ubuntu oracular-proposed/restricted amd64 Packages [27.4 kB]
147s Get:9 http://ftpmaster.internal/ubuntu oracular-proposed/restricted i386 Packages [9340 B]
147s Get:10 http://ftpmaster.internal/ubuntu oracular-proposed/universe i386 Packages [124 kB]
147s Get:11 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 Packages [300 kB]
147s Get:12 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse i386 Packages [3368 B]
147s Get:13 http://ftpmaster.internal/ubuntu oracular-proposed/multiverse amd64 Packages [9280 B]
147s Fetched 1081 kB in 0s (4570 kB/s)
147s Reading package lists...
148s Reading package lists...
149s Building dependency tree...
149s Reading state information...
149s Calculating upgrade...
149s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
149s Reading package lists...
150s Building dependency tree...
150s Reading state information...
150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
151s Hit:1 http://ftpmaster.internal/ubuntu oracular-proposed InRelease
151s Hit:2 http://ftpmaster.internal/ubuntu oracular InRelease
151s Hit:3 http://ftpmaster.internal/ubuntu oracular-updates InRelease
151s Hit:4 http://ftpmaster.internal/ubuntu oracular-security InRelease
152s Reading package lists...
152s Reading package lists...
152s Building dependency tree...
152s Reading state information...
153s Calculating upgrade...
153s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
153s Reading package lists...
153s Building dependency tree...
153s Reading state information...
154s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
155s autopkgtest [00:35:26]: testbed running kernel: Linux 6.8.0-31-generic #31-Ubuntu SMP PREEMPT_DYNAMIC Sat Apr 20 00:40:06 UTC 2024
155s autopkgtest [00:35:26]: @@@@@@@@@@@@@@@@@@@@ apt-source python-bayespy
156s Get:1 http://ftpmaster.internal/ubuntu oracular/universe python-bayespy 0.5.28-1 (dsc) [2388 B]
156s Get:2 http://ftpmaster.internal/ubuntu oracular/universe python-bayespy 0.5.28-1 (tar) [402 kB]
156s Get:3 http://ftpmaster.internal/ubuntu oracular/universe python-bayespy 0.5.28-1 (diff) [20.9 kB]
156s gpgv: Signature made Wed Feb 28 00:31:40 2024 UTC
156s gpgv:                using RSA key 7E7729476D87D6F11D91ACCBC293E7B461825ACE
156s gpgv: Can't check signature: No public key
156s dpkg-source: warning: cannot verify inline signature for ./python-bayespy_0.5.28-1.dsc: no acceptable signature found
157s autopkgtest [00:35:28]: testing package python-bayespy version 0.5.28-1
157s autopkgtest [00:35:28]: build not needed
157s autopkgtest [00:35:28]: test upstream-unittest: preparing testbed
158s Reading package lists...
158s Building dependency tree...
158s Reading state information...
158s Starting pkgProblemResolver with broken count: 0
158s Starting 2 pkgProblemResolver with broken count: 0
158s Done
159s The following additional packages will be installed:
159s   blt fonts-lyx libaec0 libblas3 libdrm-amdgpu1 libdrm-intel1 libdrm-nouveau2
159s   libdrm-radeon1 libfontenc1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa
159s   libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b
159s   libhdf5-103-1t64 libhdf5-hl-100t64 libice6 libimagequant0 libjs-jquery
159s   libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2 libllvm17t64 liblzf1
159s   libopenjp2-7 libpciaccess0 libpixman-1-0 libqhull-r8.0 libraqm0 libsm6
159s   libsz2 libtcl8.6 libtk8.6 libvulkan1 libwebpdemux2 libwebpmux3 libx11-xcb1
159s   libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
159s   libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxfont2
159s   libxft2 libxkbfile1 libxmu6 libxrandr2 libxrender1 libxshmfence1 libxslt1.1
159s   libxss1 libxt6t64 libxxf86vm1 python-matplotlib-data python3-all
159s   python3-appdirs python3-bayespy python3-brotli python3-contourpy
159s   python3-cycler python3-dateutil python3-decorator python3-fonttools
159s   python3-fs python3-h5py python3-h5py-serial python3-iniconfig
159s   python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib
159s   python3-mpmath python3-nose python3-numpy python3-packaging python3-pil
159s   python3-pil.imagetk python3-pluggy python3-pytest python3-scipy
159s   python3-sympy python3-tk python3-ufolib2 python3-zombie-imp tk8.6-blt2.5
159s   unicode-data x11-common x11-xkb-utils xserver-common xvfb
159s Suggested packages:
159s   blt-demo libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python-cycler-doc
159s   python-h5py-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
159s   fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common
159s   python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
159s   python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc
159s   python3-gmpy2 python-nose-doc gcc gfortran python-numpy-doc python3-dev
159s   python-pil-doc python-scipy-doc texlive-fonts-extra python-sympy-doc tix
159s   python3-tk-dbg
159s Recommended packages:
159s   libgl1-amber-dri javascript-common mesa-vulkan-drivers | vulkan-icd
159s   python3-bs4 python3-cssselect python3-html5lib python3-olefile g++
159s   | c++-compiler isympy-common xfonts-base
159s The following NEW packages will be installed:
159s   autopkgtest-satdep blt fonts-lyx libaec0 libblas3 libdrm-amdgpu1
159s   libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libfontenc1 libgfortran5 libgl1
159s   libgl1-mesa-dri libglapi-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1
159s   libgraphite2-3 libharfbuzz0b libhdf5-103-1t64 libhdf5-hl-100t64 libice6
159s   libimagequant0 libjs-jquery libjs-jquery-ui liblapack3 liblbfgsb0 liblcms2-2
159s   libllvm17t64 liblzf1 libopenjp2-7 libpciaccess0 libpixman-1-0 libqhull-r8.0
159s   libraqm0 libsm6 libsz2 libtcl8.6 libtk8.6 libvulkan1 libwebpdemux2
159s   libwebpmux3 libx11-xcb1 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
159s   libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0
159s   libxfixes3 libxfont2 libxft2 libxkbfile1 libxmu6 libxrandr2 libxrender1
159s   libxshmfence1 libxslt1.1 libxss1 libxt6t64 libxxf86vm1
159s   python-matplotlib-data python3-all python3-appdirs python3-bayespy
159s   python3-brotli python3-contourpy python3-cycler python3-dateutil
159s   python3-decorator python3-fonttools python3-fs python3-h5py
159s   python3-h5py-serial python3-iniconfig python3-kiwisolver python3-lxml
159s   python3-lz4 python3-matplotlib python3-mpmath python3-nose python3-numpy
159s   python3-packaging python3-pil python3-pil.imagetk python3-pluggy
159s   python3-pytest python3-scipy python3-sympy python3-tk python3-ufolib2
159s   python3-zombie-imp tk8.6-blt2.5 unicode-data x11-common x11-xkb-utils
159s   xserver-common xvfb
159s 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded.
159s Need to get 95.8 MB/95.8 MB of archives.
159s After this operation, 410 MB of additional disk space will be used.
159s Get:1 /tmp/autopkgtest.W03Qbz/1-autopkgtest-satdep.deb autopkgtest-satdep amd64 0 [764 B]
159s Get:2 http://ftpmaster.internal/ubuntu oracular/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1build1 [988 kB]
159s Get:3 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
159s Get:4 http://ftpmaster.internal/ubuntu oracular/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
159s Get:5 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-common all 1:7.7+23ubuntu3 [21.7 kB]
159s Get:6 http://ftpmaster.internal/ubuntu oracular/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
159s Get:7 http://ftpmaster.internal/ubuntu oracular/main amd64 libtk8.6 amd64 8.6.14-1build1 [779 kB]
159s Get:8 http://ftpmaster.internal/ubuntu oracular/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7build1 [630 kB]
159s Get:9 http://ftpmaster.internal/ubuntu oracular/main amd64 blt amd64 2.5.3+dfsg-7build1 [4840 B]
159s Get:10 http://ftpmaster.internal/ubuntu oracular/universe amd64 fonts-lyx all 2.4.0-1 [171 kB]
159s Get:11 http://ftpmaster.internal/ubuntu oracular/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB]
159s Get:12 http://ftpmaster.internal/ubuntu oracular/main amd64 libblas3 amd64 3.12.0-3build1 [238 kB]
159s Get:13 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-amdgpu1 amd64 2.4.120-2build1 [20.2 kB]
159s Get:14 http://ftpmaster.internal/ubuntu oracular/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB]
159s Get:15 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-intel1 amd64 2.4.120-2build1 [63.8 kB]
159s Get:16 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-nouveau2 amd64 2.4.120-2build1 [17.7 kB]
159s Get:17 http://ftpmaster.internal/ubuntu oracular/main amd64 libdrm-radeon1 amd64 2.4.120-2build1 [20.8 kB]
159s Get:18 http://ftpmaster.internal/ubuntu oracular/main amd64 libfontenc1 amd64 1:1.1.8-1build1 [14.0 kB]
159s Get:19 http://ftpmaster.internal/ubuntu oracular/main amd64 libgfortran5 amd64 14.1.0-1ubuntu1 [928 kB]
159s Get:20 http://ftpmaster.internal/ubuntu oracular/main amd64 libvulkan1 amd64 1.3.283.0-1 [143 kB]
159s Get:21 http://ftpmaster.internal/ubuntu oracular/main amd64 libglapi-mesa amd64 24.0.8-1ubuntu1 [41.1 kB]
159s Get:22 http://ftpmaster.internal/ubuntu oracular/main amd64 libllvm17t64 amd64 1:17.0.6-12 [26.2 MB]
159s Get:23 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [7508 B]
159s Get:24 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1-mesa-dri amd64 24.0.8-1ubuntu1 [8948 kB]
159s Get:25 http://ftpmaster.internal/ubuntu oracular/main amd64 libx11-xcb1 amd64 2:1.8.7-1build1 [7800 B]
159s Get:26 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [7222 B]
159s Get:27 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-glx0 amd64 1.17.0-2 [24.8 kB]
159s Get:28 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-present0 amd64 1.17.0-2 [6064 B]
159s Get:29 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-randr0 amd64 1.17.0-2 [17.9 kB]
159s Get:30 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
159s Get:31 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-sync1 amd64 1.17.0-2 [9312 B]
159s Get:32 http://ftpmaster.internal/ubuntu oracular/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [10.2 kB]
159s Get:33 http://ftpmaster.internal/ubuntu oracular/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB]
159s Get:34 http://ftpmaster.internal/ubuntu oracular/main amd64 libxshmfence1 amd64 1.3-1build5 [4764 B]
159s Get:35 http://ftpmaster.internal/ubuntu oracular/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B]
159s Get:36 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx-mesa0 amd64 24.0.8-1ubuntu1 [154 kB]
159s Get:37 http://ftpmaster.internal/ubuntu oracular/main amd64 libgomp1 amd64 14.1.0-1ubuntu1 [148 kB]
159s Get:38 http://ftpmaster.internal/ubuntu oracular/main amd64 libgraphite2-3 amd64 1.3.14-2build1 [73.0 kB]
159s Get:39 http://ftpmaster.internal/ubuntu oracular/main amd64 libharfbuzz0b amd64 8.3.0-2build2 [469 kB]
159s Get:40 http://ftpmaster.internal/ubuntu oracular/universe amd64 libsz2 amd64 1.1.3-1 [5456 B]
159s Get:41 http://ftpmaster.internal/ubuntu oracular/universe amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.1ubuntu4 [1270 kB]
159s Get:42 http://ftpmaster.internal/ubuntu oracular/universe amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.1ubuntu4 [56.0 kB]
159s Get:43 http://ftpmaster.internal/ubuntu oracular/main amd64 libice6 amd64 2:1.0.10-1build3 [41.4 kB]
159s Get:44 http://ftpmaster.internal/ubuntu oracular/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB]
159s Get:45 http://ftpmaster.internal/ubuntu oracular/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
159s Get:46 http://ftpmaster.internal/ubuntu oracular/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
159s Get:47 http://ftpmaster.internal/ubuntu oracular/main amd64 liblapack3 amd64 3.12.0-3build1 [2650 kB]
159s Get:48 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB]
159s Get:49 http://ftpmaster.internal/ubuntu oracular/main amd64 liblcms2-2 amd64 2.14-2build1 [161 kB]
159s Get:50 http://ftpmaster.internal/ubuntu oracular/universe amd64 liblzf1 amd64 3.6-4 [7624 B]
159s Get:51 http://ftpmaster.internal/ubuntu oracular/main amd64 libpixman-1-0 amd64 0.42.2-1build1 [279 kB]
159s Get:52 http://ftpmaster.internal/ubuntu oracular/universe amd64 libqhull-r8.0 amd64 2020.2-6build1 [193 kB]
159s Get:53 http://ftpmaster.internal/ubuntu oracular/main amd64 libraqm0 amd64 0.10.1-1build1 [15.0 kB]
159s Get:54 http://ftpmaster.internal/ubuntu oracular/main amd64 libsm6 amd64 2:1.2.3-1build3 [15.7 kB]
159s Get:55 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [12.4 kB]
159s Get:56 http://ftpmaster.internal/ubuntu oracular/main amd64 libwebpmux3 amd64 1.4.0-0.1 [25.8 kB]
159s Get:57 http://ftpmaster.internal/ubuntu oracular/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
159s Get:58 http://ftpmaster.internal/ubuntu oracular/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB]
159s Get:59 http://ftpmaster.internal/ubuntu oracular/main amd64 libxaw7 amd64 2:1.0.14-1build2 [187 kB]
159s Get:60 http://ftpmaster.internal/ubuntu oracular/main amd64 libxfont2 amd64 1:2.0.6-1build1 [93.0 kB]
159s Get:61 http://ftpmaster.internal/ubuntu oracular/main amd64 libxkbfile1 amd64 1:1.1.0-1build4 [70.0 kB]
159s Get:62 http://ftpmaster.internal/ubuntu oracular/main amd64 libxrandr2 amd64 2:1.5.4-1 [19.6 kB]
159s Get:63 http://ftpmaster.internal/ubuntu oracular/main amd64 libxslt1.1 amd64 1.1.39-0exp1build1 [167 kB]
159s Get:64 http://ftpmaster.internal/ubuntu oracular/universe amd64 python-matplotlib-data all 3.6.3-2ubuntu1 [2937 kB]
160s Get:65 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-all amd64 3.12.3-0ubuntu1 [888 B]
160s Get:66 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-appdirs all 1.4.4-4 [10.9 kB]
160s Get:67 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-tk amd64 3.12.3-0ubuntu1 [102 kB]
160s Get:68 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [4437 kB]
160s Get:69 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-h5py-serial amd64 3.10.0-1ubuntu3 [906 kB]
160s Get:70 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-h5py all 3.10.0-1ubuntu3 [7978 B]
160s Get:71 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-decorator all 5.1.1-5 [10.1 kB]
160s Get:72 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-scipy amd64 1.11.4-10 [15.5 MB]
160s Get:73 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-bayespy all 0.5.28-1 [242 kB]
160s Get:74 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-brotli amd64 1.1.0-2build2 [332 kB]
160s Get:75 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-contourpy amd64 1.0.7-3 [181 kB]
160s Get:76 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-cycler all 0.12.1-1 [9716 B]
160s Get:77 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-dateutil all 2.9.0-2 [80.3 kB]
160s Get:78 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [33.5 kB]
160s Get:79 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-mpmath all 1.3.0-1 [425 kB]
160s Get:80 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-sympy all 1.12-8 [3966 kB]
160s Get:81 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-fs all 2.4.16-4 [91.3 kB]
160s Get:82 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-lxml amd64 5.2.1-1 [1243 kB]
160s Get:83 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-lz4 amd64 4.0.2+dfsg-1build4 [26.2 kB]
160s Get:84 http://ftpmaster.internal/ubuntu oracular/universe amd64 unicode-data all 15.1.0-1 [8878 kB]
160s Get:85 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-fonttools amd64 4.46.0-1build2 [1436 kB]
160s Get:86 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B]
160s Get:87 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-kiwisolver amd64 1.4.5-1 [51.0 kB]
160s Get:88 http://ftpmaster.internal/ubuntu oracular/main amd64 libopenjp2-7 amd64 2.5.0-2build3 [173 kB]
160s Get:89 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-pil amd64 10.3.0-2 [457 kB]
160s Get:90 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pil.imagetk amd64 10.3.0-2 [9224 B]
160s Get:91 http://ftpmaster.internal/ubuntu oracular/main amd64 python3-packaging all 24.0-1 [41.1 kB]
160s Get:92 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-matplotlib amd64 3.6.3-2ubuntu1 [6080 kB]
160s Get:93 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-zombie-imp all 0.0.2-2 [11.9 kB]
160s Get:94 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-nose all 1.3.7-12 [117 kB]
160s Get:95 http://ftpmaster.internal/ubuntu oracular/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB]
160s Get:96 http://ftpmaster.internal/ubuntu oracular-proposed/universe amd64 python3-pytest all 8.2.2-1ubuntu1 [250 kB]
160s Get:97 http://ftpmaster.internal/ubuntu oracular/main amd64 x11-xkb-utils amd64 7.7+8build2 [170 kB]
160s Get:98 http://ftpmaster.internal/ubuntu oracular/main amd64 xserver-common all 2:21.1.12-1ubuntu1 [33.3 kB]
160s Get:99 http://ftpmaster.internal/ubuntu oracular/main amd64 libglvnd0 amd64 1.7.0-1build1 [69.6 kB]
160s Get:100 http://ftpmaster.internal/ubuntu oracular/main amd64 libglx0 amd64 1.7.0-1build1 [38.6 kB]
160s Get:101 http://ftpmaster.internal/ubuntu oracular/main amd64 libgl1 amd64 1.7.0-1build1 [102 kB]
160s Get:102 http://ftpmaster.internal/ubuntu oracular/universe amd64 xvfb amd64 2:21.1.12-1ubuntu1 [873 kB]
160s Fetched 95.8 MB in 1s (110 MB/s)
160s Selecting previously unselected package libtcl8.6:amd64.
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161s Preparing to unpack .../000-libtcl8.6_8.6.14+dfsg-1build1_amd64.deb ...
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161s Selecting previously unselected package libxrender1:amd64.
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161s Selecting previously unselected package libtk8.6:amd64.
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162s Selecting previously unselected package libxcb-shm0:amd64.
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163s Selecting previously unselected package liblapack3:amd64.
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163s Selecting previously unselected package libwebpdemux2:amd64.
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163s Selecting previously unselected package libxt6t64:amd64.
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163s Selecting previously unselected package libxaw7:amd64.
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163s Selecting previously unselected package libxfont2:amd64.
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163s Selecting previously unselected package libxkbfile1:amd64.
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163s Selecting previously unselected package libxrandr2:amd64.
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163s Selecting previously unselected package libxslt1.1:amd64.
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163s Selecting previously unselected package python-matplotlib-data.
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164s Selecting previously unselected package python3-decorator.
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164s Selecting previously unselected package python3-scipy.
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164s Selecting previously unselected package python3-bayespy.
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165s Selecting previously unselected package libopenjp2-7:amd64.
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165s Selecting previously unselected package python3-pil:amd64.
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165s Unpacking python3-pil:amd64 (10.3.0-2) ...
165s Selecting previously unselected package python3-pil.imagetk:amd64.
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165s Selecting previously unselected package python3-packaging.
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165s Unpacking python3-packaging (24.0-1) ...
165s Selecting previously unselected package python3-matplotlib.
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166s Selecting previously unselected package python3-zombie-imp.
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166s Selecting previously unselected package python3-nose.
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166s Selecting previously unselected package python3-pytest.
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166s Selecting previously unselected package x11-xkb-utils.
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166s Selecting previously unselected package xserver-common.
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166s Selecting previously unselected package libglvnd0:amd64.
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166s Unpacking libglvnd0:amd64 (1.7.0-1build1) ...
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166s Unpacking xvfb (2:21.1.12-1ubuntu1) ...
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166s Preparing to unpack .../101-1-autopkgtest-satdep.deb ...
166s Unpacking autopkgtest-satdep (0) ...
166s Setting up libgraphite2-3:amd64 (1.3.14-2build1) ...
166s Setting up libxcb-dri3-0:amd64 (1.17.0-2) ...
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166s Setting up libpixman-1-0:amd64 (0.42.2-1build1) ...
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166s Setting up libdrm-radeon1:amd64 (2.4.120-2build1) ...
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167s Setting up python3-all (3.12.3-0ubuntu1) ...
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167s Setting up python3-nose (1.3.7-12) ...
167s /usr/lib/python3/dist-packages/nose/config.py:142: SyntaxWarning: invalid escape sequence '\.'
167s   """nose configuration.
167s /usr/lib/python3/dist-packages/nose/ext/dtcompat.py:686: SyntaxWarning: invalid escape sequence '\S'
167s   _INDENT_RE = re.compile('^([ ]*)(?=\S)', re.MULTILINE)
167s /usr/lib/python3/dist-packages/nose/ext/dtcompat.py:1021: SyntaxWarning: invalid escape sequence '\s'
167s   pat = re.compile('(^|.*:)\s*\w*("|\')')
167s /usr/lib/python3/dist-packages/nose/ext/dtcompat.py:1430: SyntaxWarning: invalid escape sequence '\s'
167s   want = re.sub('(?m)^%s\s*?$' % re.escape(BLANKLINE_MARKER),
167s /usr/lib/python3/dist-packages/nose/ext/dtcompat.py:1434: SyntaxWarning: invalid escape sequence '\s'
167s   got = re.sub('(?m)^\s*?$', '', got)
167s /usr/lib/python3/dist-packages/nose/inspector.py:110: SyntaxWarning: invalid escape sequence '\ '
167s   """Find lines in home that are inspectable.
167s Setting up libaec0:amd64 (1.1.3-1) ...
167s Setting up libxxf86vm1:amd64 (1:1.1.4-1build4) ...
167s Setting up libxcb-present0:amd64 (1.17.0-2) ...
167s Setting up unicode-data (15.1.0-1) ...
167s Setting up python3-decorator (5.1.1-5) ...
167s Setting up libfontenc1:amd64 (1:1.1.8-1build1) ...
167s Setting up libblas3:amd64 (3.12.0-3build1) ...
167s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
167s Setting up python3-packaging (24.0-1) ...
167s Setting up libllvm17t64:amd64 (1:17.0.6-12) ...
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168s Setting up libwebpmux3:amd64 (1.4.0-0.1) ...
168s Setting up python3-appdirs (1.4.4-4) ...
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168s Setting up libdrm-amdgpu1:amd64 (2.4.120-2build1) ...
168s Setting up python3-sympy (1.12-8) ...
175s Setting up libice6:amd64 (2:1.0.10-1build3) ...
175s Setting up liblapack3:amd64 (3.12.0-3build1) ...
175s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
175s Setting up libxft2:amd64 (2.3.6-1build1) ...
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178s Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.1ubuntu4) ...
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178s Setting up libglx-mesa0:amd64 (24.0.8-1ubuntu1) ...
178s Setting up python3-scipy (1.11.4-10) ...
181s Setting up libglx0:amd64 (1.7.0-1build1) ...
181s Setting up blt (2.5.3+dfsg-7build1) ...
181s Setting up python3-h5py-serial (3.10.0-1ubuntu3) ...
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182s Setting up python3-h5py (3.10.0-1ubuntu3) ...
182s Setting up libxmu6:amd64 (2:1.1.3-3build2) ...
182s Setting up python3-bayespy (0.5.28-1) ...
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/add.py:117: SyntaxWarning: invalid escape sequence '\s'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/beta.py:74: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/beta.py:81: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/binomial.py:102: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/binomial.py:111: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/categorical_markov_chain.py:128: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/categorical_markov_chain.py:138: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/logistic.py:61: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/logistic.py:68: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/mixture.py:252: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/mixture.py:259: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/mixture.py:493: SyntaxWarning: invalid escape sequence '\i'
182s   """ Approximates the posterior predictive pdf \int p(x|parents)
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/poisson.py:84: SyntaxWarning: invalid escape sequence '\p'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/poisson.py:94: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/poisson.py:132: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/wishart.py:119: SyntaxWarning: invalid escape sequence '\L'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/transformations.py:62: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/transformations.py:257: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/inference/vmp/transformations.py:1299: SyntaxWarning: invalid escape sequence '\m'
182s   """
182s /usr/lib/python3/dist-packages/bayespy/utils/misc.py:272: SyntaxWarning: invalid escape sequence '\c'
182s   """
182s Setting up libxaw7:amd64 (2:1.0.14-1build2) ...
182s Setting up x11-xkb-utils (7.7+8build2) ...
182s Setting up xserver-common (2:21.1.12-1ubuntu1) ...
182s Setting up xvfb (2:21.1.12-1ubuntu1) ...
182s Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
182s Setting up python3-fonttools (4.46.0-1build2) ...
183s Setting up python3-matplotlib (3.6.3-2ubuntu1) ...
185s Setting up autopkgtest-satdep (0) ...
185s Processing triggers for libc-bin (2.39-0ubuntu8.1) ...
185s Processing triggers for man-db (2.12.1-1) ...
189s (Reading database ... 81601 files and directories currently installed.)
189s Removing autopkgtest-satdep (0) ...
189s autopkgtest [00:36:00]: test upstream-unittest: [-----------------------
189s Testing with python3.12:
191s Test the creation of Bernoulli nodes. ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
191s   warnings.warn("TestResult has no addDuration method",
191s ok
191s Test mixture of Bernoulli ... ok
191s Test the moments of Bernoulli nodes. ... ok
191s Test observation of Bernoulli node ... ok
191s Test random sampling in Bernoulli node ... ok
191s Test the creation of beta nodes. ... ok
191s Test the moments of beta nodes. ... ok
191s Test random sampling of beta nodes. ... ok
191s Test the creation of binomial nodes. ... ok
191s Test binomial mixture ... ok
191s Test binomial mixture with varying number of trials ... ok
191s Test the moments of binomial nodes. ... ok
191s Test observation of Bernoulli node ... ok
191s Test random sampling in Binomial node ... ok
191s Test constant categorical nodes ... ok
191s Check the Euclidean gradient of the categorical node ... ok
191s Test the creation of categorical nodes. ... ok
191s Test initialization of categorical nodes ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
191s   warnings.warn("TestResult has no addDuration method",
191s ok
191s Test the moments of categorical nodes. ... ok
191s Test observed categorical nodes ... ok
191s Test the creation of CategoricalMarkovChain object ... ok
191s Test the message of CategoricalMarkovChain to child ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
191s   warnings.warn("TestResult has no addDuration method",
191s ok
191s Test random sampling of categorical Markov chain ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
191s   warnings.warn("TestResult has no addDuration method",
191s ok
191s Test the creation of Concatenate node ... ok
191s Test the mask handling in Concatenate node ... ok
191s Test the message to child of Concatenate node. ... ok
191s Test the message to parents of Concatenate node. ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
191s   warnings.warn("TestResult has no addDuration method",
191s ok
191s Test the mask message to parent of Tile node. ... ok
191s Test the moments of Tile node. ... ok
191s Test the parent message of Tile node. ... ok
191s Test the constant moments of Dirichlet nodes. ... ok
191s Test the creation of Dirichlet nodes. ... ok
191s Test the moments of Dirichlet nodes. ... ok
191s test_compute_moments (bayespy.inference.vmp.nodes.tests.test_dot.TestSumMultiply.test_compute_moments) ... ok
191s Test the message from SumMultiply to its children. ... ok
191s Test the message from SumMultiply node to its parents. ... ok
191s Test that the parent nodes are validated properly in SumMultiply ... ok
191s test_lower_bound_contribution (bayespy.inference.vmp.nodes.tests.test_gamma.TestGamma.test_lower_bound_contribution) ... ok
191s Test standard gradient of a Gamma node. ... ok
191s Test Riemannian gradient of a Gamma node. ... ok
191s Test the creation of Gate node ... ok
191s Test the mask handling in Gate node ... ok
191s Test the message to child of Gate node. ... ok
191s Test the message to parents of Gate node. ... ok
191s test_message_to_parents (bayespy.inference.vmp.nodes.tests.test_gaussian.TestConcatGaussian.test_message_to_parents) ... ok
191s test_moments (bayespy.inference.vmp.nodes.tests.test_gaussian.TestConcatGaussian.test_moments) ... ok
191s Check gradient passed to inputs parent node ... ok
191s Test the constructor of GaussianARD ... ok
191s Test initialization methods of GaussianARD ... ok
191s Test the variational Bayesian lower bound term for GaussianARD. ... ok
191s Test moments of GaussianARD. ... ok
191s Test the message from GaussianARD the 2nd parent (alpha). ... ok
191s Test that GaussianARD computes the message to the 1st parent correctly. ... ok
191s Check gradient passed to inputs parent node ... ok
191s Test the rotation of Gaussian ARD arrays. ... ok
191s test_rotate_plates (bayespy.inference.vmp.nodes.tests.test_gaussian.TestGaussianARD.test_rotate_plates) ... ok
191s Test the Gaussian array covariance rotation. ... ok
191s Test the creation of GaussianGamma node ... ok
191s Test the mask handling in GaussianGamma node ... ok
191s Test the message to child of GaussianGamma node. ... ok
192s test_messages (bayespy.inference.vmp.nodes.tests.test_gaussian.TestGaussianGamma.test_messages) ... ok
192s Test standard gradient of a Gaussian node. ... ok
192s Test Riemannian gradient of a Gaussian node. ... ok
192s test_message_to_A (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestGaussianMarkovChain.test_message_to_A) ... ok
192s test_message_to_Lambda0 (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestGaussianMarkovChain.test_message_to_Lambda0) ... ok
192s Test the updating of GaussianMarkovChain. ... ok
192s test_message_to_mu0 (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestGaussianMarkovChain.test_message_to_mu0) ... ok
192s Check gradient passed to inputs parent node ... ok
192s Check gradient passed to inputs parent node ... ok
192s test_message_to_v (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestGaussianMarkovChain.test_message_to_v) ... ok
192s Test that plates are handled correctly. ... ok
192s Test the posterior estimation of GaussianMarkovChain. ... ok
192s test_message_to_B (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_B) ... ok
192s test_message_to_Lambda (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_Lambda) ... ok
192s test_message_to_S (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_S) ... ok
193s test_message_to_child (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_child) ... ok
193s test_message_to_mu (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_mu) ... ok
193s test_message_to_v (bayespy.inference.vmp.nodes.tests.test_gaussian_markov_chain.TestVaryingGaussianMarkovChain.test_message_to_v) ... ok
193s Test that VaryingGaussianMarkovChain deduces plates correctly ... ok
193s test_deterministic_mappings (bayespy.inference.vmp.nodes.tests.test_mixture.TestMixture.test_deterministic_mappings) ... /usr/lib/python3/dist-packages/bayespy/inference/vmp/nodes/dirichlet.py:91: RuntimeWarning: divide by zero encountered in log
193s   logp = np.log(p)
193s ok
193s Test the creation of Mixture node ... ok
193s Test log likelihood lower bound for Mixture node ... ok
193s Test the mask handling in Mixture node ... ok
193s Test the message to child of Mixture node. ... ok
193s Test the message to parents of Mixture node. ... ok
193s Test multinomial mixture ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
193s   warnings.warn("TestResult has no addDuration method",
193s ok
193s Test random sampling of mixture node ... ok
193s Test the creation of multinomial nodes. ... ok
193s Test lower bound for multinomial node. ... ok
193s Test multinomial mixture ... ok
193s Test multinomial mixture ... ok
193s Test the moments of multinomial nodes. ... ok
193s Tests complex conversions for moment classes ... ok
193s Test the general sum-multiply function for message computations ... ok
193s Test plate handling in _message_to_parent. ... ok
193s Test the constructor of the X[..] node operator. ... ok
193s Test message to child of X[..] node operator. ... ok
193s Test message to parent of X[..] node operator. ... ok
193s Test the creation of Poisson nodes. ... ok
193s Test the moments of Poisson nodes. ... ok
193s Test parent message computation in Take node ... ok
193s Test moments computation in Take node ... ok
193s Test that the parent nodes are validated properly ... ok
193s test_plates_multiplier_from_parent (bayespy.inference.vmp.nodes.tests.test_take.TestTake.test_plates_multiplier_from_parent) ... ok
193s Test the Wishart VB lower bound ... ok
193s Test the moments of Wishart node ... ok
193s test_annealing (bayespy.inference.vmp.tests.test_annealing.TestVB.test_annealing) ... ok
194s Test the speed-up rotation of Gaussian ARD arrays. ... ok
196s Test gradient of the rotation cost function for Gaussian ARD arrays. ... ok
196s Test the cost function of the speed-up rotation for Markov chain ... ok
197s Test the gradient of the speed-up rotation for Markov chain ... ok
197s Test the speed-up rotation of Markov chain with time-varying dynamics ... ok
197s Test the gradient of the rotation for MC with time-varying dynamics ... ok
197s Test the Gaussian elimination algorithm for block-banded matrices. ... ok
197s Test dot product multiple multi-dimensional arrays. ... ok
197s Test the add_axes method. ... ok
197s test_is_shape_subset (bayespy.utils.tests.test_misc.TestBroadcasting.test_is_shape_subset) ... ok
197s Test the ceil division ... ok
197s test_invpsi (bayespy.utils.tests.test_misc.TestInvPsi.test_invpsi) ... ok
197s Test the ceil division ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
197s   warnings.warn("TestResult has no addDuration method",
197s ok
197s Test the ceil division ... /usr/lib/python3.12/unittest/case.py:580: RuntimeWarning: TestResult has no addDuration method
197s   warnings.warn("TestResult has no addDuration method",
197s ok
197s test_multiply_shapes (bayespy.utils.tests.test_misc.TestMultiplyShapes.test_multiply_shapes) ... ok
197s test_put_simple (bayespy.utils.tests.test_misc.TestPutSimple.test_put_simple) ... ok
197s Test misc.sum_multiply. ... ok
197s Test the results of alpha-beta recursion for Markov chains ... ok
197s test_categorical (bayespy.utils.tests.test_random.TestCeilDiv.test_categorical) ... ok
197s Test random sampling from the Dirichlet distribution. ... ok
197s 
197s ----------------------------------------------------------------------
197s Ran 127 tests in 6.168s
197s 
197s OK
197s autopkgtest [00:36:08]: test upstream-unittest: -----------------------]
198s autopkgtest [00:36:09]: test upstream-unittest:  - - - - - - - - - - results - - - - - - - - - -
198s upstream-unittest    PASS
198s autopkgtest [00:36:09]: @@@@@@@@@@@@@@@@@@@@ summary
198s upstream-unittest    PASS
208s nova [W] Skipping flock for amd64
208s Creating nova instance adt-oracular-amd64-python-bayespy-20240608-003251-juju-7f2275-prod-proposed-migration-environment-3-72480b41-32f0-466d-b3ac-2473a4014975 from image adt/ubuntu-oracular-amd64-server-20240607.img (UUID d996b44c-1e10-4875-aeab-5b4c434d75a2)...