0s autopkgtest [01:54:26]: starting date and time: 2024-03-27 01:54:26+0000 0s autopkgtest [01:54:26]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [01:54:26]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.185ap4q0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade ray --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 python3-defaults/3.12.2-0ubuntu1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos01-s390x-19.secgroup --name adt-noble-s390x-ray-20240327-015426-juju-7f2275-prod-proposed-migration-environment-3-703a56bf-af27-43ca-95ad-dddfcd558b3b --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 261s autopkgtest [01:58:47]: testbed dpkg architecture: s390x 261s autopkgtest [01:58:47]: testbed apt version: 2.7.12 261s autopkgtest [01:58:47]: @@@@@@@@@@@@@@@@@@@@ test bed setup 262s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 262s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B] 262s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [497 kB] 263s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [55.4 kB] 263s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3984 kB] 264s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [694 kB] 264s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 264s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 264s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 264s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4122 kB] 265s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 265s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [48.3 kB] 265s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 268s Fetched 9539 kB in 4s (2170 kB/s) 268s Reading package lists... 271s Reading package lists... 272s Building dependency tree... 272s Reading state information... 272s Calculating upgrade... 272s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 272s Reading package lists... 273s Building dependency tree... 273s Reading state information... 273s 0 upgraded, 0 newly installed, 0 to remove and 238 not upgraded. 274s Get:1 http://ftpmaster.internal/ubuntu noble InRelease [255 kB] 274s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 274s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 274s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 275s Fetched 255 kB in 1s (218 kB/s) 276s Reading package lists... 276s Reading package lists... 277s Building dependency tree... 277s Reading state information... 277s Calculating upgrade... 277s The following packages were automatically installed and are no longer required: 277s libaio1 libnetplan0 277s Use 'sudo apt autoremove' to remove them. 278s The following packages will be REMOVED: 278s libapt-pkg6.0 libarchive13 libatm1 libcurl3-gnutls libcurl4 libdb5.3 libelf1 278s libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libgpgme11 278s libhogweed6 libmagic1 libnettle8 libnpth0 libnvme1 libparted2 libperl5.38 278s libpng16-16 libpsl5 libreadline8 libreiserfscore0 libssl3 libtirpc3 liburcu8 278s libuv1 278s The following NEW packages will be installed: 278s bpfcc-tools bpftrace fontconfig-config fonts-dejavu-core fonts-dejavu-mono 278s hwdata ieee-data libaio1t64 libapt-pkg6.0t64 libarchive13t64 libatm1t64 278s libbpfcc libc-dev-bin libc-devtools libc6-dev libclang-cpp18 libclang1-18 278s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 278s libdw1t64 libelf1t64 libext2fs2t64 libfontconfig1 libfreetype6 libgd3 278s libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgpgme11t64 278s libhogweed6t64 libjbig0 libjpeg-turbo8 libjpeg8 libllvm18 libmagic1t64 278s libnetplan1 libnettle8t64 libnpth0t64 libnvme1t64 libparted2t64 278s libperl5.38t64 libpng16-16t64 libpsl5t64 libreadline8t64 libreiserfscore0t64 278s libsharpyuv0 libssl3t64 libtiff6 libtirpc3t64 liburcu8t64 libuv1t64 libwebp7 278s libxpm4 linux-headers-6.8.0-20 linux-headers-6.8.0-20-generic 278s linux-image-6.8.0-20-generic linux-libc-dev linux-modules-6.8.0-20-generic 278s linux-modules-extra-6.8.0-20-generic linux-tools-6.8.0-20 278s linux-tools-6.8.0-20-generic linux-tools-common manpages manpages-dev 278s python3-bpfcc python3-netaddr rpcsvc-proto ubuntu-kernel-accessories 278s xdg-user-dirs 278s The following packages have been kept back: 278s s390-tools 278s The following packages will be upgraded: 278s apparmor apt apt-utils base-files bash bind9-dnsutils bind9-host bind9-libs 278s binutils binutils-common binutils-s390x-linux-gnu bolt bsdextrautils 278s bsdutils btrfs-progs coreutils cryptsetup-bin curl dbus dbus-bin dbus-daemon 278s dbus-session-bus-common dbus-system-bus-common dbus-user-session dhcpcd-base 278s dirmngr dmsetup dpkg dpkg-dev e2fsprogs eject fdisk file ftp fwupd gawk 278s gcc-14-base gir1.2-girepository-2.0 gir1.2-glib-2.0 gnupg gnupg-utils gpg 278s gpg-agent gpg-wks-client gpgconf gpgsm gpgv groff-base ibverbs-providers 278s inetutils-telnet info initramfs-tools initramfs-tools-bin 278s initramfs-tools-core install-info iproute2 jq keyboxd kmod kpartx 278s libapparmor1 libaudit-common libaudit1 libbinutils libblkid1 278s libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 libblockdev-mdraid3 278s libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 libblockdev-utils3 278s libblockdev3 libbpf1 libbrotli1 libcap-ng0 libcom-err2 libcryptsetup12 278s libctf-nobfd0 libctf0 libdbus-1-3 libdebconfclient0 libdevmapper1.02.1 278s libdpkg-perl libevent-core-2.1-7 libexpat1 libfdisk1 libfido2-1 libftdi1-2 278s libfwupd2 libgcc-s1 libgirepository-1.0-1 libglib2.0-data libgssapi-krb5-2 278s libgudev-1.0-0 libgusb2 libibverbs1 libjcat1 libjq1 libjson-glib-1.0-0 278s libjson-glib-1.0-common libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 278s libldap-common libldap2 liblocale-gettext-perl liblzma5 libmagic-mgc 278s libmbim-glib4 libmbim-proxy libmm-glib0 libmount1 libnghttp2-14 libnsl2 278s libnss-systemd libpam-modules libpam-modules-bin libpam-runtime 278s libpam-systemd libpam0g libpcsclite1 libplymouth5 libpolkit-agent-1-0 278s libpolkit-gobject-1-0 libproc2-0 libprotobuf-c1 libpython3-stdlib 278s libpython3.12-minimal libpython3.12-stdlib libqmi-glib5 libqmi-proxy 278s libqrtr-glib0 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db 278s libseccomp2 libselinux1 libsemanage-common libsemanage2 libsframe1 libslang2 278s libsmartcols1 libsqlite3-0 libss2 libssh-4 libstdc++6 libsystemd-shared 278s libsystemd0 libtext-charwidth-perl libtext-iconv-perl libtirpc-common 278s libudev1 libudisks2-0 libusb-1.0-0 libuuid1 libvolume-key1 libxml2 libxmlb2 278s libxmuu1 linux-generic linux-headers-generic linux-headers-virtual 278s linux-image-generic linux-image-virtual linux-virtual logsave lshw lsof 278s man-db motd-news-config mount mtr-tiny multipath-tools netplan-generator 278s netplan.io openssh-client openssh-server openssh-sftp-server openssl parted 278s perl perl-base perl-modules-5.38 pinentry-curses plymouth 278s plymouth-theme-ubuntu-text procps python-apt-common python3 python3-apt 278s python3-cryptography python3-dbus python3-distutils python3-gdbm python3-gi 278s python3-lib2to3 python3-minimal python3-netplan python3-pkg-resources 278s python3-pyrsistent python3-setuptools python3-yaml python3.12 278s python3.12-minimal readline-common rsync rsyslog s390-tools-data 278s shared-mime-info sudo systemd systemd-dev systemd-resolved systemd-sysv 278s systemd-timesyncd tcpdump telnet tnftp ubuntu-pro-client 278s ubuntu-pro-client-l10n udev udisks2 usb.ids util-linux util-linux-extra 278s uuid-runtime vim-common vim-tiny wget wpasupplicant xxd xz-utils zlib1g 278s 237 upgraded, 73 newly installed, 28 to remove and 1 not upgraded. 278s Need to get 224 MB of archives. 278s After this operation, 523 MB of additional disk space will be used. 278s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x motd-news-config all 13ubuntu8 [5098 B] 278s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x base-files s390x 13ubuntu8 [74.2 kB] 278s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bash s390x 5.2.21-2ubuntu3 [845 kB] 279s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdutils s390x 1:2.39.3-9ubuntu2 [96.1 kB] 279s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 279s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x parted s390x 3.6-3.1build2 [44.6 kB] 279s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblkid1 s390x 2.39.3-9ubuntu2 [128 kB] 279s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libselinux1 s390x 3.5-2ubuntu1 [84.7 kB] 279s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255.4-1ubuntu5 [103 kB] 279s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-timesyncd s390x 255.4-1ubuntu5 [35.3 kB] 279s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-session-bus-common all 1.14.10-4ubuntu2 [80.3 kB] 279s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit-common all 1:3.1.2-2.1 [5674 B] 279s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcap-ng0 s390x 0.8.4-2build1 [15.7 kB] 279s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit1 s390x 1:3.1.2-2.1 [48.9 kB] 279s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam0g s390x 1.5.3-5ubuntu3 [69.8 kB] 279s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma5 s390x 5.6.0-0.2 [137 kB] 279s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build3 [645 kB] 279s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build3 [2419 kB] 279s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build3 [829 kB] 279s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-5ubuntu1 [21.1 kB] 279s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-base s390x 5.38.2-3.2 [1961 kB] 279s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-modules-5.38 all 5.38.2-3.2 [3110 kB] 280s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gdbm s390x 3.12.2-3ubuntu1.1 [19.0 kB] 280s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x man-db s390x 2.12.0-3build4 [1246 kB] 280s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm6t64 s390x 1.23-5.1 [36.4 kB] 280s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm-compat4t64 s390x 1.23-5.1 [6880 B] 280s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libperl5.38t64 s390x 5.38.2-3.2 [5007 kB] 280s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl s390x 5.38.2-3.2 [231 kB] 280s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-6 [763 kB] 280s Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build3 [2046 kB] 280s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build6 [58.4 kB] 280s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu6 [202 kB] 280s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudisks2-0 s390x 2.10.1-6 [179 kB] 280s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udisks2 s390x 2.10.1-6 [298 kB] 280s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x shared-mime-info s390x 2.4-1build1 [474 kB] 280s Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-girepository-2.0 s390x 1.79.1-1ubuntu6 [24.5 kB] 280s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-glib-2.0 s390x 2.79.3-3ubuntu5 [180 kB] 280s Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgirepository-1.0-1 s390x 1.79.1-1ubuntu6 [84.0 kB] 280s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gi s390x 3.47.0-3build1 [236 kB] 280s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-dbus s390x 1.3.2-5build2 [100 kB] 280s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgpgme11t64 s390x 1.18.0-4.1ubuntu3 [150 kB] 280s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libvolume-key1 s390x 0.3.12-7build1 [40.8 kB] 280s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnetplan1 s390x 1.0-1 [123 kB] 280s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-netplan s390x 1.0-1 [23.0 kB] 280s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan-generator s390x 1.0-1 [59.1 kB] 280s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools-bin s390x 0.142ubuntu23 [20.5 kB] 280s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools-core all 0.142ubuntu23 [50.1 kB] 280s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools all 0.142ubuntu23 [9058 B] 280s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan.io s390x 1.0-1 [65.4 kB] 281s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmlb2 s390x 0.3.15-1build1 [70.6 kB] 281s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqrtr-glib0 s390x 1.2.2-1ubuntu3 [17.5 kB] 281s Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-glib5 s390x 1.35.2-0ubuntu1 [918 kB] 281s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-proxy s390x 1.35.2-0ubuntu1 [6122 B] 281s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-agent-1-0 s390x 124-1ubuntu1 [17.8 kB] 281s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-gobject-1-0 s390x 124-1ubuntu1 [48.3 kB] 281s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmm-glib0 s390x 1.23.4-0ubuntu1 [251 kB] 281s Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-glib4 s390x 1.31.2-0ubuntu2 [238 kB] 281s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-proxy s390x 1.31.2-0ubuntu2 [6154 B] 281s Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-common all 1.8.0-2build1 [4210 B] 281s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-0 s390x 1.8.0-2build1 [68.4 kB] 281s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgusb2 s390x 0.4.8-1build1 [39.0 kB] 281s Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgudev-1.0-0 s390x 1:238-3ubuntu2 [15.7 kB] 281s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main s390x wget s390x 1.21.4-1ubuntu2 [351 kB] 281s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libarchive13t64 s390x 3.7.2-1.1ubuntu2 [419 kB] 281s Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fwupd s390x 1.9.15-2 [4435 kB] 281s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 281s Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu8 [356 kB] 281s Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfwupd2 s390x 1.9.15-2 [136 kB] 281s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-crypto3 s390x 3.1.0-1build1 [21.6 kB] 281s Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev3 s390x 3.1.0-1build1 [52.3 kB] 281s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-utils3 s390x 3.1.0-1build1 [19.2 kB] 281s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-swap3 s390x 3.1.0-1build1 [7778 B] 281s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-part3 s390x 3.1.0-1build1 [15.4 kB] 281s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnvme1t64 s390x 1.8-3 [78.7 kB] 281s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-nvme3 s390x 3.1.0-1build1 [18.3 kB] 281s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-mdraid3 s390x 3.1.0-1build1 [13.2 kB] 281s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-loop3 s390x 3.1.0-1build1 [7138 B] 281s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main s390x logsave s390x 1.47.0-2.4~exp1ubuntu2 [22.5 kB] 281s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libext2fs2t64 s390x 1.47.0-2.4~exp1ubuntu2 [235 kB] 281s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs s390x 1.47.0-2.4~exp1ubuntu2 [615 kB] 281s Get:81 http://ftpmaster.internal/ubuntu noble/main s390x libreiserfscore0t64 s390x 1:3.6.27-7.1 [85.5 kB] 281s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main s390x btrfs-progs s390x 6.6.3-1.1build1 [959 kB] 281s Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-fs3 s390x 3.1.0-1build1 [36.5 kB] 281s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bolt s390x 0.9.6-2build1 [142 kB] 281s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-0t64 s390x 2.79.3-3ubuntu5 [1566 kB] 281s Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjcat1 s390x 0.2.0-2build2 [34.4 kB] 281s Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client-l10n s390x 31.2.2 [19.4 kB] 281s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client s390x 31.2.2 [214 kB] 281s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-utils s390x 2.4.4-2ubuntu15 [116 kB] 281s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x keyboxd s390x 2.4.4-2ubuntu15 [83.1 kB] 281s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libnpth0t64 s390x 1.6-3.1 [8148 B] 281s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgv s390x 2.4.4-2ubuntu15 [165 kB] 281s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-wks-client s390x 2.4.4-2ubuntu15 [76.8 kB] 281s Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-agent s390x 2.4.4-2ubuntu15 [240 kB] 281s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg s390x 2.4.4-2ubuntu15 [589 kB] 281s Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dirmngr s390x 2.4.4-2ubuntu15 [340 kB] 281s Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg all 2.4.4-2ubuntu15 [359 kB] 281s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-apt s390x 2.7.7 [171 kB] 281s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt-utils s390x 2.7.14 [214 kB] 281s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapt-pkg6.0t64 s390x 2.7.14 [1014 kB] 282s Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB] 282s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB] 282s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB] 282s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt s390x 2.7.14 [1390 kB] 282s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgconf s390x 2.4.4-2ubuntu15 [111 kB] 282s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgsm s390x 2.4.4-2ubuntu15 [244 kB] 282s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-4 [170 kB] 282s Get:108 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gawk s390x 1:5.2.1-2build2 [496 kB] 282s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fdisk s390x 2.39.3-9ubuntu2 [124 kB] 282s Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main s390x wpasupplicant s390x 2:2.10-21build2 [1503 kB] 282s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tnftp s390x 20230507-2build1 [107 kB] 282s Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tcpdump s390x 4.99.4-3ubuntu2 [490 kB] 282s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd-shared s390x 255.4-1ubuntu5 [2131 kB] 282s Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-resolved s390x 255.4-1ubuntu5 [304 kB] 282s Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main s390x sudo s390x 1.9.15p5-3ubuntu3 [968 kB] 283s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsync s390x 3.2.7-1build1 [446 kB] 283s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-cryptography s390x 41.0.7-4build2 [918 kB] 283s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-sftp-server s390x 1:9.6p1-3ubuntu11 [39.0 kB] 283s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-client s390x 1:9.6p1-3ubuntu11 [935 kB] 283s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-server s390x 1:9.6p1-3ubuntu11 [529 kB] 283s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssh-4 s390x 0.10.6-2build1 [189 kB] 283s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules s390x 2.1.28+dfsg1-5ubuntu1 [76.6 kB] 283s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-2 s390x 2.1.28+dfsg1-5ubuntu1 [57.8 kB] 283s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libk5crypto3 s390x 1.20.1-6ubuntu1 [90.3 kB] 283s Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgssapi-krb5-2 s390x 1.20.1-6ubuntu1 [149 kB] 283s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5support0 s390x 1.20.1-6ubuntu1 [34.6 kB] 283s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5-3 s390x 1.20.1-6ubuntu1 [360 kB] 283s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kmod s390x 31+20240202-2ubuntu4 [107 kB] 283s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkmod2 s390x 31+20240202-2ubuntu4 [56.3 kB] 283s Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfido2-1 s390x 1.14.0-1build1 [81.0 kB] 283s Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu8 [227 kB] 283s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu8 [363 kB] 283s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 283s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudev1 s390x 255.4-1ubuntu5 [178 kB] 283s Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd s390x 255.4-1ubuntu5 [3533 kB] 283s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udev s390x 255.4-1ubuntu5 [1887 kB] 283s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-sysv s390x 255.4-1ubuntu5 [11.9 kB] 283s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnss-systemd s390x 255.4-1ubuntu5 [166 kB] 283s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-systemd s390x 255.4-1ubuntu5 [242 kB] 283s Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd0 s390x 255.4-1ubuntu5 [443 kB] 283s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules-bin s390x 1.5.3-5ubuntu3 [57.4 kB] 283s Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules s390x 1.5.3-5ubuntu3 [289 kB] 283s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-runtime all 1.5.3-5ubuntu3 [40.8 kB] 283s Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-user-session s390x 1.14.10-4ubuntu2 [9960 B] 283s Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapparmor1 s390x 4.0.0-beta3-0ubuntu2 [50.8 kB] 283s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libexpat1 s390x 2.6.1-2 [94.8 kB] 283s Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-bin s390x 1.14.10-4ubuntu2 [41.4 kB] 283s Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-system-bus-common all 1.14.10-4ubuntu2 [81.5 kB] 283s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus s390x 1.14.10-4ubuntu2 [24.3 kB] 283s Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-daemon s390x 1.14.10-4ubuntu2 [118 kB] 283s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdbus-1-3 s390x 1.14.10-4ubuntu2 [213 kB] 283s Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmount1 s390x 2.39.3-9ubuntu2 [138 kB] 283s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libseccomp2 s390x 2.5.5-1ubuntu2 [53.4 kB] 283s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuuid1 s390x 2.39.3-9ubuntu2 [35.6 kB] 283s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcryptsetup12 s390x 2:2.7.0-1ubuntu2 [264 kB] 284s Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfdisk1 s390x 2.39.3-9ubuntu2 [151 kB] 284s Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mount s390x 2.39.3-9ubuntu2 [119 kB] 284s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdevmapper1.02.1 s390x 2:1.02.185-3ubuntu2 [142 kB] 284s Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libparted2t64 s390x 3.6-3.1build2 [172 kB] 284s Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3.1ubuntu1 [75.7 kB] 284s Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbrotli1 s390x 1.1.0-2build1 [375 kB] 284s Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcom-err2 s390x 1.47.0-2.4~exp1ubuntu2 [22.9 kB] 284s Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnghttp2-14 s390x 1.59.0-1build1 [77.8 kB] 284s Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-14-base s390x 14-20240315-1ubuntu1 [47.0 kB] 284s Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgcc-s1 s390x 14-20240315-1ubuntu1 [35.9 kB] 284s Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libstdc++6 s390x 14-20240315-1ubuntu1 [908 kB] 284s Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg s390x 1.22.6ubuntu5 [1278 kB] 284s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-minimal s390x 3.12.2-0ubuntu1 [27.1 kB] 284s Get:169 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3 s390x 3.12.2-0ubuntu1 [24.1 kB] 284s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-stdlib s390x 3.12.2-0ubuntu1 [9804 B] 284s Get:171 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsmartcols1 s390x 2.39.3-9ubuntu2 [67.9 kB] 284s Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdextrautils s390x 2.39.3-9ubuntu2 [76.3 kB] 284s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main s390x groff-base s390x 1.23.0-3build1 [1049 kB] 284s Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsqlite3-0 s390x 3.45.1-1ubuntu1 [747 kB] 284s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x pinentry-curses s390x 1.2.1-3ubuntu4 [37.6 kB] 284s Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-4 [56.4 kB] 284s Get:177 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpcsclite1 s390x 2.0.3-1 [21.8 kB] 284s Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libproc2-0 s390x 2:4.0.4-4ubuntu2 [60.1 kB] 284s Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main s390x procps s390x 2:4.0.4-4ubuntu2 [724 kB] 284s Get:180 http://ftpmaster.internal/ubuntu noble-proposed/main s390x coreutils s390x 9.4-3ubuntu3 [1482 kB] 284s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x util-linux-extra s390x 2.39.3-9ubuntu2 [121 kB] 284s Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main s390x util-linux s390x 2.39.3-9ubuntu2 [1143 kB] 284s Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxml2 s390x 2.9.14+dfsg-1.3ubuntu2 [818 kB] 284s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbpf1 s390x 1:1.3.0-2build1 [176 kB] 284s Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main s390x iproute2 s390x 6.1.0-1ubuntu5 [1156 kB] 284s Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libelf1t64 s390x 0.190-1.1build2 [69.7 kB] 284s Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dhcpcd-base s390x 1:10.0.6-1ubuntu2 [217 kB] 284s Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main s390x file s390x 1:5.45-3 [22.2 kB] 284s Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic-mgc s390x 1:5.45-3 [305 kB] 284s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic1t64 s390x 1:5.45-3 [93.1 kB] 284s Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libplymouth5 s390x 24.004.60-1ubuntu6 [151 kB] 284s Get:192 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB] 284s Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-common all 1.3.4+ds-1.1 [8018 B] 284s Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lsof s390x 4.95.0-1build2 [248 kB] 284s Get:195 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl2 s390x 1.3.0-3build2 [44.1 kB] 285s Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc3t64 s390x 1.3.4+ds-1.1 [85.8 kB] 285s Get:197 http://ftpmaster.internal/ubuntu noble-proposed/main s390x multipath-tools s390x 0.9.4-5ubuntu6 [318 kB] 285s Get:198 http://ftpmaster.internal/ubuntu noble/main s390x liburcu8t64 s390x 0.14.0-3.1 [67.3 kB] 285s Get:199 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-host s390x 1:9.18.24-0ubuntu3 [50.5 kB] 285s Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-dnsutils s390x 1:9.18.24-0ubuntu3 [162 kB] 285s Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-libs s390x 1:9.18.24-0ubuntu3 [1243 kB] 285s Get:202 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuv1t64 s390x 1.48.0-1.1 [101 kB] 285s Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblocale-gettext-perl s390x 1.07-6ubuntu4 [15.8 kB] 285s Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main s390x uuid-runtime s390x 2.39.3-9ubuntu2 [33.4 kB] 285s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdebconfclient0 s390x 0.271ubuntu2 [11.4 kB] 285s Get:206 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage-common all 3.5-1build4 [10.1 kB] 285s Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage2 s390x 3.5-1build4 [96.7 kB] 285s Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main s390x install-info s390x 7.1-3build1 [64.5 kB] 285s Get:209 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libss2 s390x 1.47.0-2.4~exp1ubuntu2 [17.2 kB] 285s Get:210 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dmsetup s390x 2:1.02.185-3ubuntu2 [80.4 kB] 285s Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main s390x eject s390x 2.39.3-9ubuntu2 [26.2 kB] 285s Get:212 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 285s Get:213 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libslang2 s390x 2.3.3-3build1 [501 kB] 285s Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-charwidth-perl s390x 0.04-11build2 [9484 B] 285s Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-iconv-perl s390x 1.7-8build2 [13.8 kB] 285s Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-yaml s390x 6.0.1-2build1 [121 kB] 285s Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python-apt-common all 2.7.7 [19.8 kB] 285s Get:218 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-setuptools all 68.1.2-2ubuntu1 [396 kB] 285s Get:219 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] 285s Get:220 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsyslog s390x 8.2312.0-3ubuntu7 [536 kB] 285s Get:221 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-tiny s390x 2:9.1.0016-1ubuntu6 [879 kB] 286s Get:222 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-common all 2:9.1.0016-1ubuntu6 [385 kB] 286s Get:223 http://ftpmaster.internal/ubuntu noble/main s390x xdg-user-dirs s390x 0.18-1 [18.5 kB] 286s Get:224 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xxd s390x 2:9.1.0016-1ubuntu6 [63.5 kB] 286s Get:225 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apparmor s390x 4.0.0-beta3-0ubuntu2 [710 kB] 286s Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ftp all 20230507-2build1 [4724 B] 286s Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main s390x inetutils-telnet s390x 2:2.5-3ubuntu3 [105 kB] 286s Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main s390x info s390x 7.1-3build1 [152 kB] 286s Get:229 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libusb-1.0-0 s390x 2:1.0.27-1 [54.8 kB] 286s Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmuu1 s390x 2:1.1.3-3build1 [8860 B] 286s Get:231 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lshw s390x 02.19.git.2021.06.19.996aaad9c7-2build2 [346 kB] 286s Get:232 http://ftpmaster.internal/ubuntu noble/main s390x manpages all 6.05.01-1 [1340 kB] 286s Get:233 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mtr-tiny s390x 0.95-1.1build1 [57.0 kB] 286s Get:234 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth-theme-ubuntu-text s390x 24.004.60-1ubuntu6 [10.2 kB] 286s Get:235 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth s390x 24.004.60-1ubuntu6 [147 kB] 286s Get:236 http://ftpmaster.internal/ubuntu noble-proposed/main s390x telnet all 0.17+2.5-3ubuntu3 [3682 B] 286s Get:237 http://ftpmaster.internal/ubuntu noble-proposed/main s390x usb.ids all 2024.03.18-1 [223 kB] 286s Get:238 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xz-utils s390x 5.6.0-0.2 [274 kB] 286s Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libctf-nobfd0 s390x 2.42-4ubuntu1 [100 kB] 286s Get:240 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libctf0 s390x 2.42-4ubuntu1 [98.4 kB] 286s Get:241 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils-s390x-linux-gnu s390x 2.42-4ubuntu1 [2270 kB] 286s Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbinutils s390x 2.42-4ubuntu1 [477 kB] 286s Get:243 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils s390x 2.42-4ubuntu1 [3056 B] 286s Get:244 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils-common s390x 2.42-4ubuntu1 [217 kB] 286s Get:245 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsframe1 s390x 2.42-4ubuntu1 [14.2 kB] 286s Get:246 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libllvm18 s390x 1:18.1.2-1ubuntu2 [33.4 MB] 290s Get:247 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang-cpp18 s390x 1:18.1.2-1ubuntu2 [16.1 MB] 291s Get:248 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpfcc s390x 0.29.1+ds-1ubuntu4 [697 kB] 291s Get:249 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-bpfcc all 0.29.1+ds-1ubuntu4 [40.2 kB] 291s Get:250 http://ftpmaster.internal/ubuntu noble/main s390x ieee-data all 20220827.1 [2113 kB] 291s Get:251 http://ftpmaster.internal/ubuntu noble/main s390x python3-netaddr all 0.8.0-2ubuntu1 [319 kB] 291s Get:252 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpfcc-tools all 0.29.1+ds-1ubuntu4 [687 kB] 291s Get:253 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang1-18 s390x 1:18.1.2-1ubuntu2 [9349 kB] 292s Get:254 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdw1t64 s390x 0.190-1.1build2 [286 kB] 292s Get:255 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpftrace s390x 0.20.2-1ubuntu1 [1139 kB] 292s Get:256 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cryptsetup-bin s390x 2:2.7.0-1ubuntu2 [211 kB] 292s Get:257 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg-dev all 1.22.6ubuntu5 [1074 kB] 292s Get:258 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdpkg-perl all 1.22.6ubuntu5 [269 kB] 292s Get:259 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 292s Get:260 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 292s Get:261 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu1 [37.4 kB] 292s Get:262 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libprotobuf-c1 s390x 1.4.1-1ubuntu3 [23.4 kB] 292s Get:263 http://ftpmaster.internal/ubuntu noble/main s390x hwdata all 0.379-1 [29.1 kB] 292s Get:264 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libibverbs1 s390x 50.0-2build1 [70.0 kB] 292s Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ibverbs-providers s390x 50.0-2build1 [408 kB] 293s Get:266 http://ftpmaster.internal/ubuntu noble-proposed/main s390x jq s390x 1.7.1-3 [66.5 kB] 293s Get:267 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjq1 s390x 1.7.1-3 [168 kB] 293s Get:268 http://ftpmaster.internal/ubuntu noble/main s390x libaio1t64 s390x 0.3.113-6 [7290 B] 293s Get:269 http://ftpmaster.internal/ubuntu noble/main s390x libatm1t64 s390x 1:2.5.1-5.1 [24.5 kB] 293s Get:270 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu6 [20.2 kB] 293s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfreetype6 s390x 2.13.2+dfsg-1build2 [437 kB] 293s Get:272 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu1 [150 kB] 293s Get:273 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 293s Get:274 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 293s Get:275 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 293s Get:276 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 293s Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsharpyuv0 s390x 1.3.2-0.4build2 [14.9 kB] 293s Get:278 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwebp7 s390x 1.3.2-0.4build2 [207 kB] 293s Get:279 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu1 [218 kB] 293s Get:280 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxpm4 s390x 1:3.5.17-1build1 [41.4 kB] 293s Get:281 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgd3 s390x 2.3.3-9ubuntu3 [141 kB] 293s Get:282 http://ftpmaster.internal/ubuntu noble/main s390x libc-devtools s390x 2.39-0ubuntu6 [30.6 kB] 293s Get:283 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-libc-dev s390x 6.8.0-20.20 [1592 kB] 293s Get:284 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 293s Get:285 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 293s Get:286 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu6 [1629 kB] 293s Get:287 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-core-2.1-7 s390x 2.1.12-stable-9build1 [94.3 kB] 293s Get:288 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libftdi1-2 s390x 1.5-6build4 [29.3 kB] 293s Get:289 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap-common all 2.6.7+dfsg-1~exp1ubuntu6 [31.3 kB] 293s Get:290 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-6.8.0-20-generic s390x 6.8.0-20.20 [21.0 MB] 295s Get:291 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-6.8.0-20-generic s390x 6.8.0-20.20 [9872 kB] 296s Get:292 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-extra-6.8.0-20-generic s390x 6.8.0-20.20 [11.7 MB] 297s Get:293 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-generic s390x 6.8.0-20.20+1 [1734 B] 297s Get:294 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-generic s390x 6.8.0-20.20+1 [9688 B] 297s Get:295 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-virtual s390x 6.8.0-20.20+1 [1682 B] 297s Get:296 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-virtual s390x 6.8.0-20.20+1 [9700 B] 297s Get:297 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-virtual s390x 6.8.0-20.20+1 [1642 B] 297s Get:298 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20 all 6.8.0-20.20 [13.6 MB] 298s Get:299 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20-generic s390x 6.8.0-20.20 [2579 kB] 299s Get:300 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-generic s390x 6.8.0-20.20+1 [9608 B] 299s Get:301 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-common all 6.8.0-20.20 [437 kB] 299s Get:302 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20 s390x 6.8.0-20.20 [2674 kB] 299s Get:303 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20-generic s390x 6.8.0-20.20 [1724 B] 299s Get:304 http://ftpmaster.internal/ubuntu noble/main s390x manpages-dev all 6.05.01-1 [2018 kB] 300s Get:305 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-distutils all 3.12.2-3ubuntu1.1 [133 kB] 300s Get:306 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB] 300s Get:307 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pyrsistent s390x 0.20.0-1build1 [55.8 kB] 300s Get:308 http://ftpmaster.internal/ubuntu noble-proposed/main s390x s390-tools-data all 2.31.0-0ubuntu3 [17.8 kB] 300s Get:309 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-kernel-accessories s390x 1.536build1 [10.5 kB] 300s Get:310 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kpartx s390x 0.9.4-5ubuntu6 [32.8 kB] 303s Preconfiguring packages ... 303s Fetched 224 MB in 22s (10.2 MB/s) 303s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 303s Preparing to unpack .../motd-news-config_13ubuntu8_all.deb ... 303s Unpacking motd-news-config (13ubuntu8) over (13ubuntu7) ... 303s Preparing to unpack .../base-files_13ubuntu8_s390x.deb ... 303s Unpacking base-files (13ubuntu8) over (13ubuntu7) ... 303s Setting up base-files (13ubuntu8) ... 304s motd-news.service is a disabled or a static unit not running, not starting it. 304s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 304s Preparing to unpack .../bash_5.2.21-2ubuntu3_s390x.deb ... 304s Unpacking bash (5.2.21-2ubuntu3) over (5.2.21-2ubuntu2) ... 304s Setting up bash (5.2.21-2ubuntu3) ... 304s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 304s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 304s Preparing to unpack .../bsdutils_1%3a2.39.3-9ubuntu2_s390x.deb ... 304s Unpacking bsdutils (1:2.39.3-9ubuntu2) over (1:2.39.3-6ubuntu2) ... 305s Setting up bsdutils (1:2.39.3-9ubuntu2) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 305s Preparing to unpack .../openssl_3.0.13-0ubuntu2_s390x.deb ... 305s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 305s Preparing to unpack .../parted_3.6-3.1build2_s390x.deb ... 305s Unpacking parted (3.6-3.1build2) over (3.6-3) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 305s Removing libparted2:s390x (3.6-3) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../libblkid1_2.39.3-9ubuntu2_s390x.deb ... 305s Unpacking libblkid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 305s Setting up libblkid1:s390x (2.39.3-9ubuntu2) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../libselinux1_3.5-2ubuntu1_s390x.deb ... 305s Unpacking libselinux1:s390x (3.5-2ubuntu1) over (3.5-2build1) ... 305s Setting up libselinux1:s390x (3.5-2ubuntu1) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../systemd-dev_255.4-1ubuntu5_all.deb ... 305s Unpacking systemd-dev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 305s Preparing to unpack .../systemd-timesyncd_255.4-1ubuntu5_s390x.deb ... 305s Unpacking systemd-timesyncd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 305s Preparing to unpack .../dbus-session-bus-common_1.14.10-4ubuntu2_all.deb ... 305s Unpacking dbus-session-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 305s Preparing to unpack .../libaudit-common_1%3a3.1.2-2.1_all.deb ... 305s Unpacking libaudit-common (1:3.1.2-2.1) over (1:3.1.2-2) ... 305s Setting up libaudit-common (1:3.1.2-2.1) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../libcap-ng0_0.8.4-2build1_s390x.deb ... 305s Unpacking libcap-ng0:s390x (0.8.4-2build1) over (0.8.4-2) ... 305s Setting up libcap-ng0:s390x (0.8.4-2build1) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../libaudit1_1%3a3.1.2-2.1_s390x.deb ... 305s Unpacking libaudit1:s390x (1:3.1.2-2.1) over (1:3.1.2-2) ... 305s Setting up libaudit1:s390x (1:3.1.2-2.1) ... 305s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 305s Preparing to unpack .../libpam0g_1.5.3-5ubuntu3_s390x.deb ... 305s Unpacking libpam0g:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 305s Setting up libpam0g:s390x (1.5.3-5ubuntu3) ... 306s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 306s Preparing to unpack .../liblzma5_5.6.0-0.2_s390x.deb ... 306s Unpacking liblzma5:s390x (5.6.0-0.2) over (5.4.5-0.3) ... 306s Setting up liblzma5:s390x (5.6.0-0.2) ... 306s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 306s Preparing to unpack .../python3.12_3.12.2-4build3_s390x.deb ... 306s Unpacking python3.12 (3.12.2-4build3) over (3.12.2-1) ... 306s Preparing to unpack .../python3.12-minimal_3.12.2-4build3_s390x.deb ... 306s Unpacking python3.12-minimal (3.12.2-4build3) over (3.12.2-1) ... 306s Preparing to unpack .../libpython3.12-minimal_3.12.2-4build3_s390x.deb ... 306s Unpacking libpython3.12-minimal:s390x (3.12.2-4build3) over (3.12.2-1) ... 306s Preparing to unpack .../libsasl2-modules-db_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 306s Unpacking libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 306s Preparing to unpack .../perl-base_5.38.2-3.2_s390x.deb ... 306s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ... 307s Setting up perl-base (5.38.2-3.2) ... 307s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 307s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2_all.deb ... 307s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ... 307s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_s390x.deb ... 307s Unpacking python3-gdbm:s390x (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 307s Preparing to unpack .../man-db_2.12.0-3build4_s390x.deb ... 307s Unpacking man-db (2.12.0-3build4) over (2.12.0-3) ... 307s dpkg: libgdbm-compat4:s390x: dependency problems, but removing anyway as you requested: 307s libperl5.38:s390x depends on libgdbm-compat4 (>= 1.18-3). 307s 307s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 307s Removing libgdbm-compat4:s390x (1.23-5) ... 307s dpkg: libgdbm6:s390x: dependency problems, but removing anyway as you requested: 307s libperl5.38:s390x depends on libgdbm6 (>= 1.21). 307s 307s Removing libgdbm6:s390x (1.23-5) ... 307s Selecting previously unselected package libgdbm6t64:s390x. 307s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51758 files and directories currently installed.) 307s Preparing to unpack .../libgdbm6t64_1.23-5.1_s390x.deb ... 307s Unpacking libgdbm6t64:s390x (1.23-5.1) ... 307s Selecting previously unselected package libgdbm-compat4t64:s390x. 307s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_s390x.deb ... 307s Unpacking libgdbm-compat4t64:s390x (1.23-5.1) ... 307s dpkg: libperl5.38:s390x: dependency problems, but removing anyway as you requested: 307s perl depends on libperl5.38 (= 5.38.2-3). 307s 307s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51770 files and directories currently installed.) 307s Removing libperl5.38:s390x (5.38.2-3) ... 308s Selecting previously unselected package libperl5.38t64:s390x. 308s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51248 files and directories currently installed.) 308s Preparing to unpack .../libperl5.38t64_5.38.2-3.2_s390x.deb ... 308s Unpacking libperl5.38t64:s390x (5.38.2-3.2) ... 308s Preparing to unpack .../perl_5.38.2-3.2_s390x.deb ... 308s Unpacking perl (5.38.2-3.2) over (5.38.2-3) ... 308s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested: 308s libpython3.12-stdlib:s390x depends on libdb5.3. 308s libpam-modules:s390x depends on libdb5.3. 308s iproute2 depends on libdb5.3. 308s apt-utils depends on libdb5.3. 308s 308s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51770 files and directories currently installed.) 308s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ... 308s Selecting previously unselected package libdb5.3t64:s390x. 308s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51764 files and directories currently installed.) 308s Preparing to unpack .../00-libdb5.3t64_5.3.28+dfsg2-6_s390x.deb ... 308s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 308s Preparing to unpack .../01-libpython3.12-stdlib_3.12.2-4build3_s390x.deb ... 308s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build3) over (3.12.2-1) ... 308s Preparing to unpack .../02-librtmp1_2.4+20151223.gitfa8646d.1-2build6_s390x.deb ... 308s Unpacking librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) over (2.4+20151223.gitfa8646d.1-2build4) ... 309s Preparing to unpack .../03-libldap2_2.6.7+dfsg-1~exp1ubuntu6_s390x.deb ... 309s Unpacking libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 309s Preparing to unpack .../04-libudisks2-0_2.10.1-6_s390x.deb ... 309s Unpacking libudisks2-0:s390x (2.10.1-6) over (2.10.1-1ubuntu2) ... 309s Preparing to unpack .../05-udisks2_2.10.1-6_s390x.deb ... 309s Unpacking udisks2 (2.10.1-6) over (2.10.1-1ubuntu2) ... 309s Preparing to unpack .../06-shared-mime-info_2.4-1build1_s390x.deb ... 309s Unpacking shared-mime-info (2.4-1build1) over (2.4-1) ... 309s Preparing to unpack .../07-gir1.2-girepository-2.0_1.79.1-1ubuntu6_s390x.deb ... 309s Unpacking gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 309s Preparing to unpack .../08-gir1.2-glib-2.0_2.79.3-3ubuntu5_s390x.deb ... 309s Unpacking gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 309s Preparing to unpack .../09-libgirepository-1.0-1_1.79.1-1ubuntu6_s390x.deb ... 309s Unpacking libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 309s Preparing to unpack .../10-python3-gi_3.47.0-3build1_s390x.deb ... 309s Unpacking python3-gi (3.47.0-3build1) over (3.47.0-3) ... 309s Preparing to unpack .../11-python3-dbus_1.3.2-5build2_s390x.deb ... 309s Unpacking python3-dbus (1.3.2-5build2) over (1.3.2-5build1) ... 309s dpkg: libgpgme11:s390x: dependency problems, but removing anyway as you requested: 309s libvolume-key1:s390x depends on libgpgme11 (>= 1.4.1). 309s libjcat1:s390x depends on libgpgme11 (>= 1.2.0). 309s 309s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51765 files and directories currently installed.) 309s Removing libgpgme11:s390x (1.18.0-4ubuntu1) ... 309s Selecting previously unselected package libgpgme11t64:s390x. 309s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51759 files and directories currently installed.) 309s Preparing to unpack .../00-libgpgme11t64_1.18.0-4.1ubuntu3_s390x.deb ... 309s Unpacking libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 309s Preparing to unpack .../01-libvolume-key1_0.3.12-7build1_s390x.deb ... 309s Unpacking libvolume-key1:s390x (0.3.12-7build1) over (0.3.12-5build2) ... 309s Selecting previously unselected package libnetplan1:s390x. 309s Preparing to unpack .../02-libnetplan1_1.0-1_s390x.deb ... 309s Unpacking libnetplan1:s390x (1.0-1) ... 309s Preparing to unpack .../03-python3-netplan_1.0-1_s390x.deb ... 309s Unpacking python3-netplan (1.0-1) over (0.107.1-3) ... 309s Preparing to unpack .../04-netplan-generator_1.0-1_s390x.deb ... 310s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 310s Unpacking netplan-generator (1.0-1) over (0.107.1-3) ... 310s Preparing to unpack .../05-initramfs-tools-bin_0.142ubuntu23_s390x.deb ... 310s Unpacking initramfs-tools-bin (0.142ubuntu23) over (0.142ubuntu20) ... 310s Preparing to unpack .../06-initramfs-tools-core_0.142ubuntu23_all.deb ... 310s Unpacking initramfs-tools-core (0.142ubuntu23) over (0.142ubuntu20) ... 310s Preparing to unpack .../07-initramfs-tools_0.142ubuntu23_all.deb ... 310s Unpacking initramfs-tools (0.142ubuntu23) over (0.142ubuntu20) ... 310s Preparing to unpack .../08-netplan.io_1.0-1_s390x.deb ... 310s Unpacking netplan.io (1.0-1) over (0.107.1-3) ... 310s Preparing to unpack .../09-libxmlb2_0.3.15-1build1_s390x.deb ... 310s Unpacking libxmlb2:s390x (0.3.15-1build1) over (0.3.15-1) ... 310s Preparing to unpack .../10-libqrtr-glib0_1.2.2-1ubuntu3_s390x.deb ... 310s Unpacking libqrtr-glib0:s390x (1.2.2-1ubuntu3) over (1.2.2-1ubuntu2) ... 310s Preparing to unpack .../11-libqmi-glib5_1.35.2-0ubuntu1_s390x.deb ... 310s Unpacking libqmi-glib5:s390x (1.35.2-0ubuntu1) over (1.34.0-2) ... 310s Preparing to unpack .../12-libqmi-proxy_1.35.2-0ubuntu1_s390x.deb ... 310s Unpacking libqmi-proxy (1.35.2-0ubuntu1) over (1.34.0-2) ... 310s Preparing to unpack .../13-libpolkit-agent-1-0_124-1ubuntu1_s390x.deb ... 310s Unpacking libpolkit-agent-1-0:s390x (124-1ubuntu1) over (124-1) ... 310s Preparing to unpack .../14-libpolkit-gobject-1-0_124-1ubuntu1_s390x.deb ... 310s Unpacking libpolkit-gobject-1-0:s390x (124-1ubuntu1) over (124-1) ... 310s Preparing to unpack .../15-libmm-glib0_1.23.4-0ubuntu1_s390x.deb ... 310s Unpacking libmm-glib0:s390x (1.23.4-0ubuntu1) over (1.22.0-3) ... 310s Preparing to unpack .../16-libmbim-glib4_1.31.2-0ubuntu2_s390x.deb ... 310s Unpacking libmbim-glib4:s390x (1.31.2-0ubuntu2) over (1.30.0-1) ... 310s Preparing to unpack .../17-libmbim-proxy_1.31.2-0ubuntu2_s390x.deb ... 310s Unpacking libmbim-proxy (1.31.2-0ubuntu2) over (1.30.0-1) ... 310s Preparing to unpack .../18-libjson-glib-1.0-common_1.8.0-2build1_all.deb ... 310s Unpacking libjson-glib-1.0-common (1.8.0-2build1) over (1.8.0-2) ... 310s Preparing to unpack .../19-libjson-glib-1.0-0_1.8.0-2build1_s390x.deb ... 310s Unpacking libjson-glib-1.0-0:s390x (1.8.0-2build1) over (1.8.0-2) ... 310s Preparing to unpack .../20-libgusb2_0.4.8-1build1_s390x.deb ... 310s Unpacking libgusb2:s390x (0.4.8-1build1) over (0.4.8-1) ... 310s Preparing to unpack .../21-libgudev-1.0-0_1%3a238-3ubuntu2_s390x.deb ... 310s Unpacking libgudev-1.0-0:s390x (1:238-3ubuntu2) over (1:238-3) ... 310s Preparing to unpack .../22-wget_1.21.4-1ubuntu2_s390x.deb ... 310s Unpacking wget (1.21.4-1ubuntu2) over (1.21.4-1ubuntu1) ... 310s dpkg: libarchive13:s390x: dependency problems, but removing anyway as you requested: 310s fwupd depends on libarchive13 (>= 3.2.1). 310s 310s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51773 files and directories currently installed.) 310s Removing libarchive13:s390x (3.7.2-1ubuntu2) ... 310s Selecting previously unselected package libarchive13t64:s390x. 310s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51767 files and directories currently installed.) 310s Preparing to unpack .../libarchive13t64_3.7.2-1.1ubuntu2_s390x.deb ... 310s Unpacking libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 310s Preparing to unpack .../fwupd_1.9.15-2_s390x.deb ... 310s Unpacking fwupd (1.9.15-2) over (1.9.14-1) ... 311s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested: 311s libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0). 311s 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51774 files and directories currently installed.) 311s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... 311s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 311s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 311s 311s Removing libpsl5:s390x (0.21.2-1build1) ... 311s Selecting previously unselected package libpsl5t64:s390x. 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51762 files and directories currently installed.) 311s Preparing to unpack .../0-libpsl5t64_0.21.2-1.1_s390x.deb ... 311s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 311s Selecting previously unselected package libcurl3t64-gnutls:s390x. 311s Preparing to unpack .../1-libcurl3t64-gnutls_8.5.0-2ubuntu8_s390x.deb ... 311s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 311s Preparing to unpack .../2-libfwupd2_1.9.15-2_s390x.deb ... 311s Unpacking libfwupd2:s390x (1.9.15-2) over (1.9.14-1) ... 311s Preparing to unpack .../3-libblockdev-crypto3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-crypto3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../4-libblockdev3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../5-libblockdev-utils3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-utils3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../6-libblockdev-swap3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-swap3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../7-libblockdev-part3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-part3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s dpkg: libnvme1: dependency problems, but removing anyway as you requested: 311s libblockdev-nvme3:s390x depends on libnvme1 (>= 1.7.1). 311s 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51775 files and directories currently installed.) 311s Removing libnvme1 (1.8-2) ... 311s Selecting previously unselected package libnvme1t64. 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51768 files and directories currently installed.) 311s Preparing to unpack .../libnvme1t64_1.8-3_s390x.deb ... 311s Unpacking libnvme1t64 (1.8-3) ... 311s Preparing to unpack .../libblockdev-nvme3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-nvme3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../libblockdev-mdraid3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-mdraid3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../libblockdev-loop3_3.1.0-1build1_s390x.deb ... 311s Unpacking libblockdev-loop3:s390x (3.1.0-1build1) over (3.1.0-1) ... 311s Preparing to unpack .../logsave_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 311s Unpacking logsave (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 311s dpkg: libext2fs2:s390x: dependency problems, but removing anyway as you requested: 311s libblockdev-fs3:s390x depends on libext2fs2 (>= 1.42.11). 311s e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1). 311s btrfs-progs depends on libext2fs2 (>= 1.42). 311s 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51776 files and directories currently installed.) 311s Removing libext2fs2:s390x (1.47.0-2ubuntu1) ... 311s Selecting previously unselected package libext2fs2t64:s390x. 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51769 files and directories currently installed.) 311s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 311s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2 to /lib/s390x-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' 311s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2.3 to /lib/s390x-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 311s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2 to /lib/s390x-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' 311s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2.4 to /lib/s390x-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 311s Unpacking libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 311s Setting up libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51785 files and directories currently installed.) 311s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 311s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 311s dpkg: libreiserfscore0: dependency problems, but removing anyway as you requested: 311s btrfs-progs depends on libreiserfscore0 (>= 1:3.6.27). 311s 311s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51785 files and directories currently installed.) 311s Removing libreiserfscore0 (1:3.6.27-7) ... 311s Selecting previously unselected package libreiserfscore0t64. 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51780 files and directories currently installed.) 312s Preparing to unpack .../libreiserfscore0t64_1%3a3.6.27-7.1_s390x.deb ... 312s Unpacking libreiserfscore0t64 (1:3.6.27-7.1) ... 312s Preparing to unpack .../btrfs-progs_6.6.3-1.1build1_s390x.deb ... 312s Unpacking btrfs-progs (6.6.3-1.1build1) over (6.6.3-1.1) ... 312s Preparing to unpack .../libblockdev-fs3_3.1.0-1build1_s390x.deb ... 312s Unpacking libblockdev-fs3:s390x (3.1.0-1build1) over (3.1.0-1) ... 312s Preparing to unpack .../bolt_0.9.6-2build1_s390x.deb ... 312s Unpacking bolt (0.9.6-2build1) over (0.9.6-2) ... 312s dpkg: libglib2.0-0:s390x: dependency problems, but removing anyway as you requested: 312s s390-tools depends on libglib2.0-0 (>= 2.77.0). 312s libnetplan0:s390x depends on libglib2.0-0 (>= 2.75.3). 312s libjcat1:s390x depends on libglib2.0-0 (>= 2.75.3). 312s 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51786 files and directories currently installed.) 312s Removing libglib2.0-0:s390x (2.79.2-1~ubuntu1) ... 312s Selecting previously unselected package libglib2.0-0t64:s390x. 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51761 files and directories currently installed.) 312s Preparing to unpack .../0-libglib2.0-0t64_2.79.3-3ubuntu5_s390x.deb ... 312s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:s390x.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 312s removed '/var/lib/dpkg/info/libglib2.0-0:s390x.postrm' 312s Unpacking libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 312s Preparing to unpack .../1-libjcat1_0.2.0-2build2_s390x.deb ... 312s Unpacking libjcat1:s390x (0.2.0-2build2) over (0.2.0-2) ... 312s Preparing to unpack .../2-ubuntu-pro-client-l10n_31.2.2_s390x.deb ... 312s Unpacking ubuntu-pro-client-l10n (31.2.2) over (31.1) ... 312s Preparing to unpack .../3-ubuntu-pro-client_31.2.2_s390x.deb ... 312s Unpacking ubuntu-pro-client (31.2.2) over (31.1) ... 312s Preparing to unpack .../4-gnupg-utils_2.4.4-2ubuntu15_s390x.deb ... 312s Unpacking gnupg-utils (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 312s Preparing to unpack .../5-keyboxd_2.4.4-2ubuntu15_s390x.deb ... 312s Unpacking keyboxd (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 312s dpkg: libnpth0:s390x: dependency problems, but removing anyway as you requested: 312s gpgv depends on libnpth0 (>= 0.90). 312s gpgsm depends on libnpth0 (>= 0.90). 312s gpg-agent depends on libnpth0 (>= 0.90). 312s gpg depends on libnpth0 (>= 0.90). 312s dirmngr depends on libnpth0 (>= 0.90). 312s 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51786 files and directories currently installed.) 312s Removing libnpth0:s390x (1.6-3build2) ... 312s Selecting previously unselected package libnpth0t64:s390x. 312s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 312s Preparing to unpack .../libnpth0t64_1.6-3.1_s390x.deb ... 312s Unpacking libnpth0t64:s390x (1.6-3.1) ... 312s Setting up libnpth0t64:s390x (1.6-3.1) ... 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51787 files and directories currently installed.) 313s Preparing to unpack .../gpgv_2.4.4-2ubuntu15_s390x.deb ... 313s Unpacking gpgv (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Setting up gpgv (2.4.4-2ubuntu15) ... 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51787 files and directories currently installed.) 313s Preparing to unpack .../0-gpg-wks-client_2.4.4-2ubuntu15_s390x.deb ... 313s Unpacking gpg-wks-client (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Preparing to unpack .../1-gpg-agent_2.4.4-2ubuntu15_s390x.deb ... 313s Unpacking gpg-agent (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Preparing to unpack .../2-gpg_2.4.4-2ubuntu15_s390x.deb ... 313s Unpacking gpg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Preparing to unpack .../3-dirmngr_2.4.4-2ubuntu15_s390x.deb ... 313s Unpacking dirmngr (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Preparing to unpack .../4-gnupg_2.4.4-2ubuntu15_all.deb ... 313s Unpacking gnupg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 313s Preparing to unpack .../5-python3-apt_2.7.7_s390x.deb ... 313s Unpacking python3-apt (2.7.7) over (2.7.6) ... 313s Preparing to unpack .../6-apt-utils_2.7.14_s390x.deb ... 313s Unpacking apt-utils (2.7.14) over (2.7.12) ... 313s dpkg: libapt-pkg6.0:s390x: dependency problems, but removing anyway as you requested: 313s apt depends on libapt-pkg6.0 (>= 2.7.12). 313s 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51785 files and directories currently installed.) 313s Removing libapt-pkg6.0:s390x (2.7.12) ... 313s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested: 313s libhogweed6:s390x depends on libnettle8. 313s libgnutls30:s390x depends on libnettle8 (>= 3.9~). 313s 313s Removing libnettle8:s390x (3.9.1-2) ... 313s Selecting previously unselected package libapt-pkg6.0t64:s390x. 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51729 files and directories currently installed.) 313s Preparing to unpack .../libapt-pkg6.0t64_2.7.14_s390x.deb ... 313s Unpacking libapt-pkg6.0t64:s390x (2.7.14) ... 313s Setting up libapt-pkg6.0t64:s390x (2.7.14) ... 313s Selecting previously unselected package libnettle8t64:s390x. 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51779 files and directories currently installed.) 313s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ... 313s Unpacking libnettle8t64:s390x (3.9.1-2.2) ... 313s Setting up libnettle8t64:s390x (3.9.1-2.2) ... 313s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested: 313s libgnutls30:s390x depends on libhogweed6 (>= 3.6). 313s 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51787 files and directories currently installed.) 313s Removing libhogweed6:s390x (3.9.1-2) ... 313s Selecting previously unselected package libhogweed6t64:s390x. 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51782 files and directories currently installed.) 313s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ... 313s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ... 313s Setting up libhogweed6t64:s390x (3.9.1-2.2) ... 313s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested: 313s apt depends on libgnutls30 (>= 3.8.1). 313s 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51788 files and directories currently installed.) 313s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ... 313s Selecting previously unselected package libgnutls30t64:s390x. 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51779 files and directories currently installed.) 313s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ... 313s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 313s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 313s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51807 files and directories currently installed.) 313s Preparing to unpack .../archives/apt_2.7.14_s390x.deb ... 314s Unpacking apt (2.7.14) over (2.7.12) ... 314s Setting up apt (2.7.14) ... 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51807 files and directories currently installed.) 315s Preparing to unpack .../gpgconf_2.4.4-2ubuntu15_s390x.deb ... 315s Unpacking gpgconf (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 315s Preparing to unpack .../gpgsm_2.4.4-2ubuntu15_s390x.deb ... 315s Unpacking gpgsm (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 315s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested: 315s wpasupplicant depends on libreadline8 (>= 6.0). 315s gawk depends on libreadline8 (>= 6.0). 315s fdisk depends on libreadline8 (>= 6.0). 315s 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51807 files and directories currently installed.) 315s Removing libreadline8:s390x (8.2-3) ... 315s Selecting previously unselected package libreadline8t64:s390x. 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51795 files and directories currently installed.) 315s Preparing to unpack .../libreadline8t64_8.2-4_s390x.deb ... 315s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 315s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 315s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 315s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 315s Unpacking libreadline8t64:s390x (8.2-4) ... 315s Setting up libreadline8t64:s390x (8.2-4) ... 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51815 files and directories currently installed.) 315s Preparing to unpack .../00-gawk_1%3a5.2.1-2build2_s390x.deb ... 315s Unpacking gawk (1:5.2.1-2build2) over (1:5.2.1-2) ... 316s Preparing to unpack .../01-fdisk_2.39.3-9ubuntu2_s390x.deb ... 316s Unpacking fdisk (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 316s Preparing to unpack .../02-wpasupplicant_2%3a2.10-21build2_s390x.deb ... 316s Unpacking wpasupplicant (2:2.10-21build2) over (2:2.10-21) ... 316s Preparing to unpack .../03-tnftp_20230507-2build1_s390x.deb ... 316s Unpacking tnftp (20230507-2build1) over (20230507-2) ... 316s Preparing to unpack .../04-tcpdump_4.99.4-3ubuntu2_s390x.deb ... 316s Unpacking tcpdump (4.99.4-3ubuntu2) over (4.99.4-3ubuntu1) ... 316s Preparing to unpack .../05-libsystemd-shared_255.4-1ubuntu5_s390x.deb ... 316s Unpacking libsystemd-shared:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 316s Preparing to unpack .../06-systemd-resolved_255.4-1ubuntu5_s390x.deb ... 316s Unpacking systemd-resolved (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 316s Preparing to unpack .../07-sudo_1.9.15p5-3ubuntu3_s390x.deb ... 316s Unpacking sudo (1.9.15p5-3ubuntu3) over (1.9.15p5-3ubuntu1) ... 316s Preparing to unpack .../08-rsync_3.2.7-1build1_s390x.deb ... 316s Unpacking rsync (3.2.7-1build1) over (3.2.7-1) ... 316s Preparing to unpack .../09-python3-cryptography_41.0.7-4build2_s390x.deb ... 316s Unpacking python3-cryptography (41.0.7-4build2) over (41.0.7-3) ... 316s Preparing to unpack .../10-openssh-sftp-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 316s Unpacking openssh-sftp-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 316s Preparing to unpack .../11-openssh-client_1%3a9.6p1-3ubuntu11_s390x.deb ... 316s Unpacking openssh-client (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 317s Preparing to unpack .../12-openssh-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 317s Unpacking openssh-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 317s Preparing to unpack .../13-libssh-4_0.10.6-2build1_s390x.deb ... 317s Unpacking libssh-4:s390x (0.10.6-2build1) over (0.10.6-2) ... 317s Preparing to unpack .../14-libsasl2-modules_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 317s Unpacking libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 317s Preparing to unpack .../15-libsasl2-2_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 317s Unpacking libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 317s Preparing to unpack .../16-libk5crypto3_1.20.1-6ubuntu1_s390x.deb ... 317s Unpacking libk5crypto3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 317s Preparing to unpack .../17-libgssapi-krb5-2_1.20.1-6ubuntu1_s390x.deb ... 317s Unpacking libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 317s Preparing to unpack .../18-libkrb5support0_1.20.1-6ubuntu1_s390x.deb ... 317s Unpacking libkrb5support0:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 317s Preparing to unpack .../19-libkrb5-3_1.20.1-6ubuntu1_s390x.deb ... 317s Unpacking libkrb5-3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 317s Preparing to unpack .../20-kmod_31+20240202-2ubuntu4_s390x.deb ... 317s Unpacking kmod (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 317s Preparing to unpack .../21-libkmod2_31+20240202-2ubuntu4_s390x.deb ... 317s Unpacking libkmod2:s390x (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 317s Preparing to unpack .../22-libfido2-1_1.14.0-1build1_s390x.deb ... 317s Unpacking libfido2-1:s390x (1.14.0-1build1) over (1.14.0-1) ... 317s Preparing to unpack .../23-curl_8.5.0-2ubuntu8_s390x.deb ... 317s Unpacking curl (8.5.0-2ubuntu8) over (8.5.0-2ubuntu2) ... 317s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 317s s390-tools depends on libcurl4 (>= 7.16.2). 317s 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51815 files and directories currently installed.) 317s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 317s Selecting previously unselected package libcurl4t64:s390x. 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51810 files and directories currently installed.) 317s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu8_s390x.deb ... 317s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu8) ... 317s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 317s systemd depends on libssl3 (>= 3.0.0). 317s s390-tools depends on libssl3 (>= 3.0.0). 317s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 317s libtss2-esys-3.0.2-0:s390x depends on libssl3 (>= 3.0.0). 317s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 317s dhcpcd-base depends on libssl3 (>= 3.0.0). 317s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 317s 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 317s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 317s Selecting previously unselected package libssl3t64:s390x. 317s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51805 files and directories currently installed.) 317s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 317s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 317s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 318s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51818 files and directories currently installed.) 318s Preparing to unpack .../libudev1_255.4-1ubuntu5_s390x.deb ... 318s Unpacking libudev1:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 318s Setting up libudev1:s390x (255.4-1ubuntu5) ... 318s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51818 files and directories currently installed.) 318s Preparing to unpack .../systemd_255.4-1ubuntu5_s390x.deb ... 318s Unpacking systemd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 318s Preparing to unpack .../udev_255.4-1ubuntu5_s390x.deb ... 318s Unpacking udev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 318s Preparing to unpack .../libsystemd0_255.4-1ubuntu5_s390x.deb ... 318s Unpacking libsystemd0:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 318s Setting up libsystemd0:s390x (255.4-1ubuntu5) ... 318s Setting up libkmod2:s390x (31+20240202-2ubuntu4) ... 318s Setting up libsystemd-shared:s390x (255.4-1ubuntu5) ... 318s Setting up systemd-dev (255.4-1ubuntu5) ... 318s Setting up systemd (255.4-1ubuntu5) ... 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51818 files and directories currently installed.) 320s Preparing to unpack .../systemd-sysv_255.4-1ubuntu5_s390x.deb ... 320s Unpacking systemd-sysv (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 320s Preparing to unpack .../libnss-systemd_255.4-1ubuntu5_s390x.deb ... 320s Unpacking libnss-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 320s Preparing to unpack .../libpam-systemd_255.4-1ubuntu5_s390x.deb ... 320s Unpacking libpam-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 320s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu3_s390x.deb ... 320s Unpacking libpam-modules-bin (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 320s Setting up libpam-modules-bin (1.5.3-5ubuntu3) ... 320s pam_namespace.service is a disabled or a static unit not running, not starting it. 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51818 files and directories currently installed.) 320s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu3_s390x.deb ... 320s Unpacking libpam-modules:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 320s Setting up libpam-modules:s390x (1.5.3-5ubuntu3) ... 320s Installing new version of config file /etc/security/namespace.init ... 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 320s Preparing to unpack .../libpam-runtime_1.5.3-5ubuntu3_all.deb ... 320s Unpacking libpam-runtime (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 320s Setting up libpam-runtime (1.5.3-5ubuntu3) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 321s Preparing to unpack .../0-dbus-user-session_1.14.10-4ubuntu2_s390x.deb ... 321s Unpacking dbus-user-session (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../1-libapparmor1_4.0.0-beta3-0ubuntu2_s390x.deb ... 321s Unpacking libapparmor1:s390x (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 321s Preparing to unpack .../2-libexpat1_2.6.1-2_s390x.deb ... 321s Unpacking libexpat1:s390x (2.6.1-2) over (2.6.0-1) ... 321s Preparing to unpack .../3-dbus-bin_1.14.10-4ubuntu2_s390x.deb ... 321s Unpacking dbus-bin (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../4-dbus-system-bus-common_1.14.10-4ubuntu2_all.deb ... 321s Unpacking dbus-system-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../5-dbus_1.14.10-4ubuntu2_s390x.deb ... 321s Unpacking dbus (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../6-dbus-daemon_1.14.10-4ubuntu2_s390x.deb ... 321s Unpacking dbus-daemon (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../7-libdbus-1-3_1.14.10-4ubuntu2_s390x.deb ... 321s Unpacking libdbus-1-3:s390x (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 321s Preparing to unpack .../8-libmount1_2.39.3-9ubuntu2_s390x.deb ... 321s Unpacking libmount1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 321s Setting up libmount1:s390x (2.39.3-9ubuntu2) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 321s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu2_s390x.deb ... 321s Unpacking libseccomp2:s390x (2.5.5-1ubuntu2) over (2.5.5-1ubuntu1) ... 321s Setting up libseccomp2:s390x (2.5.5-1ubuntu2) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 321s Preparing to unpack .../libuuid1_2.39.3-9ubuntu2_s390x.deb ... 321s Unpacking libuuid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 321s Setting up libuuid1:s390x (2.39.3-9ubuntu2) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51816 files and directories currently installed.) 321s Preparing to unpack .../0-libcryptsetup12_2%3a2.7.0-1ubuntu2_s390x.deb ... 321s Unpacking libcryptsetup12:s390x (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 321s Preparing to unpack .../1-libfdisk1_2.39.3-9ubuntu2_s390x.deb ... 321s Unpacking libfdisk1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 321s Preparing to unpack .../2-mount_2.39.3-9ubuntu2_s390x.deb ... 321s Unpacking mount (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 321s Preparing to unpack .../3-libdevmapper1.02.1_2%3a1.02.185-3ubuntu2_s390x.deb ... 321s Unpacking libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 321s Selecting previously unselected package libparted2t64:s390x. 321s Preparing to unpack .../4-libparted2t64_3.6-3.1build2_s390x.deb ... 321s Unpacking libparted2t64:s390x (3.6-3.1build2) ... 321s Preparing to unpack .../5-zlib1g_1%3a1.3.dfsg-3.1ubuntu1_s390x.deb ... 321s Unpacking zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ... 321s Setting up zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) ... 321s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 321s Preparing to unpack .../libbrotli1_1.1.0-2build1_s390x.deb ... 321s Unpacking libbrotli1:s390x (1.1.0-2build1) over (1.1.0-2) ... 321s Preparing to unpack .../libcom-err2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 321s Unpacking libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 321s Preparing to unpack .../libnghttp2-14_1.59.0-1build1_s390x.deb ... 321s Unpacking libnghttp2-14:s390x (1.59.0-1build1) over (1.59.0-1) ... 321s Preparing to unpack .../gcc-14-base_14-20240315-1ubuntu1_s390x.deb ... 321s Unpacking gcc-14-base:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 321s Setting up gcc-14-base:s390x (14-20240315-1ubuntu1) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 322s Preparing to unpack .../libgcc-s1_14-20240315-1ubuntu1_s390x.deb ... 322s Unpacking libgcc-s1:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 322s Setting up libgcc-s1:s390x (14-20240315-1ubuntu1) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 322s Preparing to unpack .../libstdc++6_14-20240315-1ubuntu1_s390x.deb ... 322s Unpacking libstdc++6:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 322s Setting up libstdc++6:s390x (14-20240315-1ubuntu1) ... 322s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 322s Preparing to unpack .../dpkg_1.22.6ubuntu5_s390x.deb ... 322s Unpacking dpkg (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 322s Setting up dpkg (1.22.6ubuntu5) ... 322s Setting up libpython3.12-minimal:s390x (3.12.2-4build3) ... 322s Setting up libexpat1:s390x (2.6.1-2) ... 322s Setting up python3.12-minimal (3.12.2-4build3) ... 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 324s Preparing to unpack .../python3-minimal_3.12.2-0ubuntu1_s390x.deb ... 324s Unpacking python3-minimal (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 324s Setting up python3-minimal (3.12.2-0ubuntu1) ... 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 324s Preparing to unpack .../python3_3.12.2-0ubuntu1_s390x.deb ... 324s Unpacking python3 (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 324s Preparing to unpack .../libpython3-stdlib_3.12.2-0ubuntu1_s390x.deb ... 324s Unpacking libpython3-stdlib:s390x (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 324s Preparing to unpack .../libsmartcols1_2.39.3-9ubuntu2_s390x.deb ... 324s Unpacking libsmartcols1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 324s Setting up libsmartcols1:s390x (2.39.3-9ubuntu2) ... 324s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51823 files and directories currently installed.) 324s Preparing to unpack .../0-bsdextrautils_2.39.3-9ubuntu2_s390x.deb ... 324s Unpacking bsdextrautils (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 325s Preparing to unpack .../1-groff-base_1.23.0-3build1_s390x.deb ... 325s Unpacking groff-base (1.23.0-3build1) over (1.23.0-3) ... 325s Preparing to unpack .../2-libsqlite3-0_3.45.1-1ubuntu1_s390x.deb ... 325s Unpacking libsqlite3-0:s390x (3.45.1-1ubuntu1) over (3.45.1-1) ... 325s Preparing to unpack .../3-pinentry-curses_1.2.1-3ubuntu4_s390x.deb ... 325s Unpacking pinentry-curses (1.2.1-3ubuntu4) over (1.2.1-3ubuntu1) ... 325s Preparing to unpack .../4-readline-common_8.2-4_all.deb ... 325s Unpacking readline-common (8.2-4) over (8.2-3) ... 325s Preparing to unpack .../5-libpcsclite1_2.0.3-1_s390x.deb ... 325s Unpacking libpcsclite1:s390x (2.0.3-1) over (2.0.0-1) ... 325s Preparing to unpack .../6-libproc2-0_2%3a4.0.4-4ubuntu2_s390x.deb ... 325s Unpacking libproc2-0:s390x (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 325s Preparing to unpack .../7-procps_2%3a4.0.4-4ubuntu2_s390x.deb ... 325s Unpacking procps (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 325s Preparing to unpack .../8-coreutils_9.4-3ubuntu3_s390x.deb ... 325s Unpacking coreutils (9.4-3ubuntu3) over (9.4-2ubuntu4) ... 325s Setting up coreutils (9.4-3ubuntu3) ... 325s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51824 files and directories currently installed.) 325s Preparing to unpack .../util-linux-extra_2.39.3-9ubuntu2_s390x.deb ... 325s Unpacking util-linux-extra (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 325s Preparing to unpack .../util-linux_2.39.3-9ubuntu2_s390x.deb ... 325s Unpacking util-linux (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 326s Setting up util-linux (2.39.3-9ubuntu2) ... 327s fstrim.service is a disabled or a static unit not running, not starting it. 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51824 files and directories currently installed.) 327s Preparing to unpack .../libxml2_2.9.14+dfsg-1.3ubuntu2_s390x.deb ... 327s Unpacking libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) over (2.9.14+dfsg-1.3ubuntu1) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51824 files and directories currently installed.) 327s Removing libatm1:s390x (1:2.5.1-5) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51819 files and directories currently installed.) 327s Preparing to unpack .../libbpf1_1%3a1.3.0-2build1_s390x.deb ... 327s Unpacking libbpf1:s390x (1:1.3.0-2build1) over (1:1.3.0-2) ... 327s Preparing to unpack .../iproute2_6.1.0-1ubuntu5_s390x.deb ... 327s Unpacking iproute2 (6.1.0-1ubuntu5) over (6.1.0-1ubuntu2) ... 327s dpkg: libelf1:s390x: dependency problems, but removing anyway as you requested: 327s linux-headers-6.8.0-11-generic depends on libelf1 (>= 0.144). 327s 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51819 files and directories currently installed.) 327s Removing libelf1:s390x (0.190-1) ... 327s Selecting previously unselected package libelf1t64:s390x. 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51814 files and directories currently installed.) 327s Preparing to unpack .../libelf1t64_0.190-1.1build2_s390x.deb ... 327s Unpacking libelf1t64:s390x (0.190-1.1build2) ... 327s Preparing to unpack .../dhcpcd-base_1%3a10.0.6-1ubuntu2_s390x.deb ... 327s Unpacking dhcpcd-base (1:10.0.6-1ubuntu2) over (1:10.0.6-1ubuntu1) ... 327s Preparing to unpack .../file_1%3a5.45-3_s390x.deb ... 327s Unpacking file (1:5.45-3) over (1:5.45-2) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51819 files and directories currently installed.) 327s Removing libmagic1:s390x (1:5.45-2) ... 327s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51809 files and directories currently installed.) 327s Preparing to unpack .../libmagic-mgc_1%3a5.45-3_s390x.deb ... 327s Unpacking libmagic-mgc (1:5.45-3) over (1:5.45-2) ... 327s Selecting previously unselected package libmagic1t64:s390x. 327s Preparing to unpack .../libmagic1t64_1%3a5.45-3_s390x.deb ... 327s Unpacking libmagic1t64:s390x (1:5.45-3) ... 328s Preparing to unpack .../libplymouth5_24.004.60-1ubuntu6_s390x.deb ... 328s Unpacking libplymouth5:s390x (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51820 files and directories currently installed.) 328s Removing libpng16-16:s390x (1.6.43-1) ... 328s Selecting previously unselected package libpng16-16t64:s390x. 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51810 files and directories currently installed.) 328s Preparing to unpack .../libpng16-16t64_1.6.43-3_s390x.deb ... 328s Unpacking libpng16-16t64:s390x (1.6.43-3) ... 328s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 328s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 328s Preparing to unpack .../lsof_4.95.0-1build2_s390x.deb ... 328s Unpacking lsof (4.95.0-1build2) over (4.95.0-1build1) ... 328s Preparing to unpack .../libnsl2_1.3.0-3build2_s390x.deb ... 328s Unpacking libnsl2:s390x (1.3.0-3build2) over (1.3.0-3) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51821 files and directories currently installed.) 328s Removing libtirpc3:s390x (1.3.4+ds-1build1) ... 328s Selecting previously unselected package libtirpc3t64:s390x. 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51815 files and directories currently installed.) 328s Preparing to unpack .../libtirpc3t64_1.3.4+ds-1.1_s390x.deb ... 328s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3 to /lib/s390x-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 328s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3.0.0 to /lib/s390x-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 328s Unpacking libtirpc3t64:s390x (1.3.4+ds-1.1) ... 328s Preparing to unpack .../multipath-tools_0.9.4-5ubuntu6_s390x.deb ... 328s Unpacking multipath-tools (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 328s dpkg: liburcu8:s390x: dependency problems, but removing anyway as you requested: 328s xfsprogs depends on liburcu8 (>= 0.13.0). 328s 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51825 files and directories currently installed.) 328s Removing liburcu8:s390x (0.14.0-3) ... 328s Selecting previously unselected package liburcu8t64:s390x. 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51806 files and directories currently installed.) 328s Preparing to unpack .../liburcu8t64_0.14.0-3.1_s390x.deb ... 328s Unpacking liburcu8t64:s390x (0.14.0-3.1) ... 328s Preparing to unpack .../bind9-host_1%3a9.18.24-0ubuntu3_s390x.deb ... 328s Unpacking bind9-host (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 328s Preparing to unpack .../bind9-dnsutils_1%3a9.18.24-0ubuntu3_s390x.deb ... 328s Unpacking bind9-dnsutils (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 328s Preparing to unpack .../bind9-libs_1%3a9.18.24-0ubuntu3_s390x.deb ... 328s Unpacking bind9-libs:s390x (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51826 files and directories currently installed.) 328s Removing libuv1:s390x (1.48.0-1) ... 328s Selecting previously unselected package libuv1t64:s390x. 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51821 files and directories currently installed.) 328s Preparing to unpack .../libuv1t64_1.48.0-1.1_s390x.deb ... 328s Unpacking libuv1t64:s390x (1.48.0-1.1) ... 329s Preparing to unpack .../liblocale-gettext-perl_1.07-6ubuntu4_s390x.deb ... 329s Unpacking liblocale-gettext-perl (1.07-6ubuntu4) over (1.07-6build1) ... 329s Preparing to unpack .../uuid-runtime_2.39.3-9ubuntu2_s390x.deb ... 329s Unpacking uuid-runtime (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 329s Preparing to unpack .../libdebconfclient0_0.271ubuntu2_s390x.deb ... 329s Unpacking libdebconfclient0:s390x (0.271ubuntu2) over (0.271ubuntu1) ... 329s Setting up libdebconfclient0:s390x (0.271ubuntu2) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51827 files and directories currently installed.) 329s Preparing to unpack .../libsemanage-common_3.5-1build4_all.deb ... 329s Unpacking libsemanage-common (3.5-1build4) over (3.5-1build2) ... 329s Setting up libsemanage-common (3.5-1build4) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51827 files and directories currently installed.) 329s Preparing to unpack .../libsemanage2_3.5-1build4_s390x.deb ... 329s Unpacking libsemanage2:s390x (3.5-1build4) over (3.5-1build2) ... 329s Setting up libsemanage2:s390x (3.5-1build4) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51827 files and directories currently installed.) 329s Preparing to unpack .../install-info_7.1-3build1_s390x.deb ... 329s Unpacking install-info (7.1-3build1) over (7.1-3) ... 329s Setting up install-info (7.1-3build1) ... 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51827 files and directories currently installed.) 329s Preparing to unpack .../000-libss2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 329s Unpacking libss2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 329s Preparing to unpack .../001-dmsetup_2%3a1.02.185-3ubuntu2_s390x.deb ... 329s Unpacking dmsetup (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 329s Preparing to unpack .../002-eject_2.39.3-9ubuntu2_s390x.deb ... 329s Unpacking eject (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 329s Preparing to unpack .../003-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 329s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 329s Preparing to unpack .../004-libslang2_2.3.3-3build1_s390x.deb ... 329s Unpacking libslang2:s390x (2.3.3-3build1) over (2.3.3-3) ... 329s Preparing to unpack .../005-libtext-charwidth-perl_0.04-11build2_s390x.deb ... 329s Unpacking libtext-charwidth-perl:s390x (0.04-11build2) over (0.04-11build1) ... 329s Preparing to unpack .../006-libtext-iconv-perl_1.7-8build2_s390x.deb ... 329s Unpacking libtext-iconv-perl:s390x (1.7-8build2) over (1.7-8build1) ... 329s Preparing to unpack .../007-python3-yaml_6.0.1-2build1_s390x.deb ... 330s Unpacking python3-yaml (6.0.1-2build1) over (6.0.1-2) ... 330s Preparing to unpack .../008-python-apt-common_2.7.7_all.deb ... 330s Unpacking python-apt-common (2.7.7) over (2.7.6) ... 330s Preparing to unpack .../009-python3-setuptools_68.1.2-2ubuntu1_all.deb ... 330s Unpacking python3-setuptools (68.1.2-2ubuntu1) over (68.1.2-2) ... 330s Preparing to unpack .../010-python3-pkg-resources_68.1.2-2ubuntu1_all.deb ... 330s Unpacking python3-pkg-resources (68.1.2-2ubuntu1) over (68.1.2-2) ... 330s Preparing to unpack .../011-rsyslog_8.2312.0-3ubuntu7_s390x.deb ... 330s Unpacking rsyslog (8.2312.0-3ubuntu7) over (8.2312.0-3ubuntu3) ... 330s Preparing to unpack .../012-vim-tiny_2%3a9.1.0016-1ubuntu6_s390x.deb ... 330s Unpacking vim-tiny (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 330s Preparing to unpack .../013-vim-common_2%3a9.1.0016-1ubuntu6_all.deb ... 330s Unpacking vim-common (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 330s Selecting previously unselected package xdg-user-dirs. 330s Preparing to unpack .../014-xdg-user-dirs_0.18-1_s390x.deb ... 330s Unpacking xdg-user-dirs (0.18-1) ... 330s Preparing to unpack .../015-xxd_2%3a9.1.0016-1ubuntu6_s390x.deb ... 330s Unpacking xxd (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 330s Preparing to unpack .../016-apparmor_4.0.0-beta3-0ubuntu2_s390x.deb ... 331s Unpacking apparmor (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 331s Preparing to unpack .../017-ftp_20230507-2build1_all.deb ... 331s Unpacking ftp (20230507-2build1) over (20230507-2) ... 331s Preparing to unpack .../018-inetutils-telnet_2%3a2.5-3ubuntu3_s390x.deb ... 331s Unpacking inetutils-telnet (2:2.5-3ubuntu3) over (2:2.5-3ubuntu1) ... 331s Preparing to unpack .../019-info_7.1-3build1_s390x.deb ... 331s Unpacking info (7.1-3build1) over (7.1-3) ... 331s Preparing to unpack .../020-libusb-1.0-0_2%3a1.0.27-1_s390x.deb ... 331s Unpacking libusb-1.0-0:s390x (2:1.0.27-1) over (2:1.0.26-1) ... 331s Preparing to unpack .../021-libxmuu1_2%3a1.1.3-3build1_s390x.deb ... 331s Unpacking libxmuu1:s390x (2:1.1.3-3build1) over (2:1.1.3-3) ... 331s Preparing to unpack .../022-lshw_02.19.git.2021.06.19.996aaad9c7-2build2_s390x.deb ... 331s Unpacking lshw (02.19.git.2021.06.19.996aaad9c7-2build2) over (02.19.git.2021.06.19.996aaad9c7-2build1) ... 331s Selecting previously unselected package manpages. 331s Preparing to unpack .../023-manpages_6.05.01-1_all.deb ... 331s Unpacking manpages (6.05.01-1) ... 331s Preparing to unpack .../024-mtr-tiny_0.95-1.1build1_s390x.deb ... 331s Unpacking mtr-tiny (0.95-1.1build1) over (0.95-1.1) ... 332s Preparing to unpack .../025-plymouth-theme-ubuntu-text_24.004.60-1ubuntu6_s390x.deb ... 332s Unpacking plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 332s Preparing to unpack .../026-plymouth_24.004.60-1ubuntu6_s390x.deb ... 332s Unpacking plymouth (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 332s Preparing to unpack .../027-telnet_0.17+2.5-3ubuntu3_all.deb ... 332s Unpacking telnet (0.17+2.5-3ubuntu3) over (0.17+2.5-3ubuntu1) ... 332s Preparing to unpack .../028-usb.ids_2024.03.18-1_all.deb ... 332s Unpacking usb.ids (2024.03.18-1) over (2024.01.30-1) ... 332s Preparing to unpack .../029-xz-utils_5.6.0-0.2_s390x.deb ... 332s Unpacking xz-utils (5.6.0-0.2) over (5.4.5-0.3) ... 332s Preparing to unpack .../030-libctf-nobfd0_2.42-4ubuntu1_s390x.deb ... 332s Unpacking libctf-nobfd0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../031-libctf0_2.42-4ubuntu1_s390x.deb ... 332s Unpacking libctf0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../032-binutils-s390x-linux-gnu_2.42-4ubuntu1_s390x.deb ... 332s Unpacking binutils-s390x-linux-gnu (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../033-libbinutils_2.42-4ubuntu1_s390x.deb ... 332s Unpacking libbinutils:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../034-binutils_2.42-4ubuntu1_s390x.deb ... 332s Unpacking binutils (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../035-binutils-common_2.42-4ubuntu1_s390x.deb ... 332s Unpacking binutils-common:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Preparing to unpack .../036-libsframe1_2.42-4ubuntu1_s390x.deb ... 332s Unpacking libsframe1:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 332s Selecting previously unselected package libllvm18:s390x. 332s Preparing to unpack .../037-libllvm18_1%3a18.1.2-1ubuntu2_s390x.deb ... 332s Unpacking libllvm18:s390x (1:18.1.2-1ubuntu2) ... 334s Selecting previously unselected package libclang-cpp18. 334s Preparing to unpack .../038-libclang-cpp18_1%3a18.1.2-1ubuntu2_s390x.deb ... 334s Unpacking libclang-cpp18 (1:18.1.2-1ubuntu2) ... 335s Selecting previously unselected package libbpfcc:s390x. 335s Preparing to unpack .../039-libbpfcc_0.29.1+ds-1ubuntu4_s390x.deb ... 335s Unpacking libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 335s Selecting previously unselected package python3-bpfcc. 335s Preparing to unpack .../040-python3-bpfcc_0.29.1+ds-1ubuntu4_all.deb ... 335s Unpacking python3-bpfcc (0.29.1+ds-1ubuntu4) ... 335s Selecting previously unselected package ieee-data. 335s Preparing to unpack .../041-ieee-data_20220827.1_all.deb ... 335s Unpacking ieee-data (20220827.1) ... 336s Selecting previously unselected package python3-netaddr. 336s Preparing to unpack .../042-python3-netaddr_0.8.0-2ubuntu1_all.deb ... 336s Unpacking python3-netaddr (0.8.0-2ubuntu1) ... 336s Selecting previously unselected package bpfcc-tools. 336s Preparing to unpack .../043-bpfcc-tools_0.29.1+ds-1ubuntu4_all.deb ... 336s Unpacking bpfcc-tools (0.29.1+ds-1ubuntu4) ... 336s Selecting previously unselected package libclang1-18. 336s Preparing to unpack .../044-libclang1-18_1%3a18.1.2-1ubuntu2_s390x.deb ... 336s Unpacking libclang1-18 (1:18.1.2-1ubuntu2) ... 337s Selecting previously unselected package libdw1t64:s390x. 337s Preparing to unpack .../045-libdw1t64_0.190-1.1build2_s390x.deb ... 337s Unpacking libdw1t64:s390x (0.190-1.1build2) ... 337s Selecting previously unselected package bpftrace. 337s Preparing to unpack .../046-bpftrace_0.20.2-1ubuntu1_s390x.deb ... 337s Unpacking bpftrace (0.20.2-1ubuntu1) ... 337s Preparing to unpack .../047-cryptsetup-bin_2%3a2.7.0-1ubuntu2_s390x.deb ... 337s Unpacking cryptsetup-bin (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 337s Preparing to unpack .../048-dpkg-dev_1.22.6ubuntu5_all.deb ... 337s Unpacking dpkg-dev (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 337s Preparing to unpack .../049-libdpkg-perl_1.22.6ubuntu5_all.deb ... 337s Unpacking libdpkg-perl (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 337s Selecting previously unselected package fonts-dejavu-mono. 337s Preparing to unpack .../050-fonts-dejavu-mono_2.37-8_all.deb ... 337s Unpacking fonts-dejavu-mono (2.37-8) ... 337s Selecting previously unselected package fonts-dejavu-core. 337s Preparing to unpack .../051-fonts-dejavu-core_2.37-8_all.deb ... 337s Unpacking fonts-dejavu-core (2.37-8) ... 337s Selecting previously unselected package fontconfig-config. 337s Preparing to unpack .../052-fontconfig-config_2.15.0-1.1ubuntu1_s390x.deb ... 337s Unpacking fontconfig-config (2.15.0-1.1ubuntu1) ... 337s Preparing to unpack .../053-libprotobuf-c1_1.4.1-1ubuntu3_s390x.deb ... 337s Unpacking libprotobuf-c1:s390x (1.4.1-1ubuntu3) over (1.4.1-1ubuntu2) ... 337s Selecting previously unselected package hwdata. 337s Preparing to unpack .../054-hwdata_0.379-1_all.deb ... 337s Unpacking hwdata (0.379-1) ... 337s Preparing to unpack .../055-libibverbs1_50.0-2build1_s390x.deb ... 337s Unpacking libibverbs1:s390x (50.0-2build1) over (50.0-2) ... 337s Preparing to unpack .../056-ibverbs-providers_50.0-2build1_s390x.deb ... 337s Unpacking ibverbs-providers:s390x (50.0-2build1) over (50.0-2) ... 337s Preparing to unpack .../057-jq_1.7.1-3_s390x.deb ... 337s Unpacking jq (1.7.1-3) over (1.7.1-2) ... 337s Preparing to unpack .../058-libjq1_1.7.1-3_s390x.deb ... 337s Unpacking libjq1:s390x (1.7.1-3) over (1.7.1-2) ... 337s Selecting previously unselected package libaio1t64:s390x. 337s Preparing to unpack .../059-libaio1t64_0.3.113-6_s390x.deb ... 337s Unpacking libaio1t64:s390x (0.3.113-6) ... 337s Selecting previously unselected package libatm1t64:s390x. 337s Preparing to unpack .../060-libatm1t64_1%3a2.5.1-5.1_s390x.deb ... 337s Unpacking libatm1t64:s390x (1:2.5.1-5.1) ... 337s Selecting previously unselected package libc-dev-bin. 337s Preparing to unpack .../061-libc-dev-bin_2.39-0ubuntu6_s390x.deb ... 337s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 337s Selecting previously unselected package libfreetype6:s390x. 337s Preparing to unpack .../062-libfreetype6_2.13.2+dfsg-1build2_s390x.deb ... 337s Unpacking libfreetype6:s390x (2.13.2+dfsg-1build2) ... 337s Selecting previously unselected package libfontconfig1:s390x. 337s Preparing to unpack .../063-libfontconfig1_2.15.0-1.1ubuntu1_s390x.deb ... 337s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 337s Selecting previously unselected package libjpeg-turbo8:s390x. 337s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 337s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 337s Selecting previously unselected package libjpeg8:s390x. 337s Preparing to unpack .../065-libjpeg8_8c-2ubuntu11_s390x.deb ... 337s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 337s Selecting previously unselected package libdeflate0:s390x. 337s Preparing to unpack .../066-libdeflate0_1.19-1_s390x.deb ... 337s Unpacking libdeflate0:s390x (1.19-1) ... 337s Selecting previously unselected package libjbig0:s390x. 337s Preparing to unpack .../067-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 337s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 338s Selecting previously unselected package libsharpyuv0:s390x. 338s Preparing to unpack .../068-libsharpyuv0_1.3.2-0.4build2_s390x.deb ... 338s Unpacking libsharpyuv0:s390x (1.3.2-0.4build2) ... 338s Selecting previously unselected package libwebp7:s390x. 338s Preparing to unpack .../069-libwebp7_1.3.2-0.4build2_s390x.deb ... 338s Unpacking libwebp7:s390x (1.3.2-0.4build2) ... 338s Selecting previously unselected package libtiff6:s390x. 338s Preparing to unpack .../070-libtiff6_4.5.1+git230720-4ubuntu1_s390x.deb ... 338s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 338s Selecting previously unselected package libxpm4:s390x. 338s Preparing to unpack .../071-libxpm4_1%3a3.5.17-1build1_s390x.deb ... 338s Unpacking libxpm4:s390x (1:3.5.17-1build1) ... 338s Selecting previously unselected package libgd3:s390x. 338s Preparing to unpack .../072-libgd3_2.3.3-9ubuntu3_s390x.deb ... 338s Unpacking libgd3:s390x (2.3.3-9ubuntu3) ... 338s Selecting previously unselected package libc-devtools. 338s Preparing to unpack .../073-libc-devtools_2.39-0ubuntu6_s390x.deb ... 338s Unpacking libc-devtools (2.39-0ubuntu6) ... 338s Selecting previously unselected package linux-libc-dev:s390x. 338s Preparing to unpack .../074-linux-libc-dev_6.8.0-20.20_s390x.deb ... 338s Unpacking linux-libc-dev:s390x (6.8.0-20.20) ... 338s Selecting previously unselected package libcrypt-dev:s390x. 338s Preparing to unpack .../075-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 338s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 338s Selecting previously unselected package rpcsvc-proto. 338s Preparing to unpack .../076-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 338s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 338s Selecting previously unselected package libc6-dev:s390x. 338s Preparing to unpack .../077-libc6-dev_2.39-0ubuntu6_s390x.deb ... 338s Unpacking libc6-dev:s390x (2.39-0ubuntu6) ... 338s Preparing to unpack .../078-libevent-core-2.1-7_2.1.12-stable-9build1_s390x.deb ... 338s Unpacking libevent-core-2.1-7:s390x (2.1.12-stable-9build1) over (2.1.12-stable-9) ... 338s Preparing to unpack .../079-libftdi1-2_1.5-6build4_s390x.deb ... 338s Unpacking libftdi1-2:s390x (1.5-6build4) over (1.5-6build3) ... 338s Preparing to unpack .../080-libldap-common_2.6.7+dfsg-1~exp1ubuntu6_all.deb ... 338s Unpacking libldap-common (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 338s Selecting previously unselected package linux-modules-6.8.0-20-generic. 338s Preparing to unpack .../081-linux-modules-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 338s Unpacking linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 338s Selecting previously unselected package linux-image-6.8.0-20-generic. 338s Preparing to unpack .../082-linux-image-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 338s Unpacking linux-image-6.8.0-20-generic (6.8.0-20.20) ... 339s Selecting previously unselected package linux-modules-extra-6.8.0-20-generic. 339s Preparing to unpack .../083-linux-modules-extra-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 339s Unpacking linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 339s Preparing to unpack .../084-linux-generic_6.8.0-20.20+1_s390x.deb ... 339s Unpacking linux-generic (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 339s Preparing to unpack .../085-linux-image-generic_6.8.0-20.20+1_s390x.deb ... 339s Unpacking linux-image-generic (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 339s Preparing to unpack .../086-linux-virtual_6.8.0-20.20+1_s390x.deb ... 339s Unpacking linux-virtual (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 339s Preparing to unpack .../087-linux-image-virtual_6.8.0-20.20+1_s390x.deb ... 339s Unpacking linux-image-virtual (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 339s Preparing to unpack .../088-linux-headers-virtual_6.8.0-20.20+1_s390x.deb ... 339s Unpacking linux-headers-virtual (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 339s Selecting previously unselected package linux-headers-6.8.0-20. 339s Preparing to unpack .../089-linux-headers-6.8.0-20_6.8.0-20.20_all.deb ... 339s Unpacking linux-headers-6.8.0-20 (6.8.0-20.20) ... 343s Selecting previously unselected package linux-headers-6.8.0-20-generic. 343s Preparing to unpack .../090-linux-headers-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 343s Unpacking linux-headers-6.8.0-20-generic (6.8.0-20.20) ... 344s Preparing to unpack .../091-linux-headers-generic_6.8.0-20.20+1_s390x.deb ... 344s Unpacking linux-headers-generic (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 344s Selecting previously unselected package linux-tools-common. 344s Preparing to unpack .../092-linux-tools-common_6.8.0-20.20_all.deb ... 344s Unpacking linux-tools-common (6.8.0-20.20) ... 344s Selecting previously unselected package linux-tools-6.8.0-20. 344s Preparing to unpack .../093-linux-tools-6.8.0-20_6.8.0-20.20_s390x.deb ... 344s Unpacking linux-tools-6.8.0-20 (6.8.0-20.20) ... 344s Selecting previously unselected package linux-tools-6.8.0-20-generic. 344s Preparing to unpack .../094-linux-tools-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 344s Unpacking linux-tools-6.8.0-20-generic (6.8.0-20.20) ... 344s Selecting previously unselected package manpages-dev. 344s Preparing to unpack .../095-manpages-dev_6.05.01-1_all.deb ... 344s Unpacking manpages-dev (6.05.01-1) ... 345s Preparing to unpack .../096-python3-distutils_3.12.2-3ubuntu1.1_all.deb ... 345s Unpacking python3-distutils (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 345s Preparing to unpack .../097-python3-lib2to3_3.12.2-3ubuntu1.1_all.deb ... 345s Unpacking python3-lib2to3 (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 345s Preparing to unpack .../098-python3-pyrsistent_0.20.0-1build1_s390x.deb ... 345s Unpacking python3-pyrsistent:s390x (0.20.0-1build1) over (0.20.0-1) ... 345s Preparing to unpack .../099-s390-tools-data_2.31.0-0ubuntu3_all.deb ... 345s Unpacking s390-tools-data (2.31.0-0ubuntu3) over (2.31.0-0ubuntu1) ... 345s Selecting previously unselected package ubuntu-kernel-accessories. 345s Preparing to unpack .../100-ubuntu-kernel-accessories_1.536build1_s390x.deb ... 345s Unpacking ubuntu-kernel-accessories (1.536build1) ... 345s Preparing to unpack .../101-kpartx_0.9.4-5ubuntu6_s390x.deb ... 345s Unpacking kpartx (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 345s Setting up pinentry-curses (1.2.1-3ubuntu4) ... 345s Setting up motd-news-config (13ubuntu8) ... 345s Setting up libtext-iconv-perl:s390x (1.7-8build2) ... 345s Setting up libtext-charwidth-perl:s390x (0.04-11build2) ... 345s Setting up libsharpyuv0:s390x (1.3.2-0.4build2) ... 345s Setting up liburcu8t64:s390x (0.14.0-3.1) ... 345s Setting up tcpdump (4.99.4-3ubuntu2) ... 345s Setting up libibverbs1:s390x (50.0-2build1) ... 345s Setting up systemd-sysv (255.4-1ubuntu5) ... 345s Setting up ubuntu-kernel-accessories (1.536build1) ... 345s Setting up libapparmor1:s390x (4.0.0-beta3-0ubuntu2) ... 345s Setting up libatm1t64:s390x (1:2.5.1-5.1) ... 345s Setting up libgdbm6t64:s390x (1.23-5.1) ... 345s Setting up bsdextrautils (2.39.3-9ubuntu2) ... 345s Setting up libxpm4:s390x (1:3.5.17-1build1) ... 345s Setting up libgdbm-compat4t64:s390x (1.23-5.1) ... 345s Setting up xdg-user-dirs (0.18-1) ... 345s Setting up ibverbs-providers:s390x (50.0-2build1) ... 345s Setting up linux-headers-6.8.0-20 (6.8.0-20.20) ... 345s Setting up libmagic-mgc (1:5.45-3) ... 345s Setting up gawk (1:5.2.1-2build2) ... 345s Setting up libjq1:s390x (1.7.1-3) ... 345s Setting up manpages (6.05.01-1) ... 345s Setting up libtirpc-common (1.3.4+ds-1.1) ... 345s Setting up libbrotli1:s390x (1.1.0-2build1) ... 345s Setting up libsqlite3-0:s390x (3.45.1-1ubuntu1) ... 345s Setting up libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) ... 345s Setting up libuv1t64:s390x (1.48.0-1.1) ... 345s Setting up libmagic1t64:s390x (1:5.45-3) ... 345s Setting up rsyslog (8.2312.0-3ubuntu7) ... 346s info: The user `syslog' is already a member of `adm'. 347s Setting up binutils-common:s390x (2.42-4ubuntu1) ... 347s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 347s Setting up libnghttp2-14:s390x (1.59.0-1build1) ... 347s Setting up libdeflate0:s390x (1.19-1) ... 347s Setting up linux-libc-dev:s390x (6.8.0-20.20) ... 347s Setting up libctf-nobfd0:s390x (2.42-4ubuntu1) ... 347s Setting up libnss-systemd:s390x (255.4-1ubuntu5) ... 347s Setting up libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) ... 347s Setting up file (1:5.45-3) ... 347s Setting up kmod (31+20240202-2ubuntu4) ... 347s Setting up lshw (02.19.git.2021.06.19.996aaad9c7-2build2) ... 347s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu6) ... 347s Setting up libprotobuf-c1:s390x (1.4.1-1ubuntu3) ... 347s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 347s Setting up xxd (2:9.1.0016-1ubuntu6) ... 347s Setting up libsframe1:s390x (2.42-4ubuntu1) ... 347s Setting up libelf1t64:s390x (0.190-1.1build2) ... 347s Setting up libkrb5support0:s390x (1.20.1-6ubuntu1) ... 347s Setting up libdw1t64:s390x (0.190-1.1build2) ... 347s Setting up linux-headers-6.8.0-20-generic (6.8.0-20.20) ... 347s Setting up eject (2.39.3-9ubuntu2) ... 347s Setting up apparmor (4.0.0-beta3-0ubuntu2) ... 347s Installing new version of config file /etc/apparmor.d/abstractions/authentication ... 347s Installing new version of config file /etc/apparmor.d/abstractions/crypto ... 347s Installing new version of config file /etc/apparmor.d/abstractions/kde-open5 ... 347s Installing new version of config file /etc/apparmor.d/abstractions/openssl ... 348s Installing new version of config file /etc/apparmor.d/code ... 348s Installing new version of config file /etc/apparmor.d/firefox ... 349s Reloading AppArmor profiles 354s Setting up libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 354s No schema files found: doing nothing. 354s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 354s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 354s Setting up vim-common (2:9.1.0016-1ubuntu6) ... 354s Setting up libqrtr-glib0:s390x (1.2.2-1ubuntu3) ... 354s Setting up libslang2:s390x (2.3.3-3build1) ... 354s Setting up libnvme1t64 (1.8-3) ... 354s Setting up mtr-tiny (0.95-1.1build1) ... 354s Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) ... 354s Setting up libdbus-1-3:s390x (1.14.10-4ubuntu2) ... 354s Setting up xz-utils (5.6.0-0.2) ... 354s Setting up perl-modules-5.38 (5.38.2-3.2) ... 354s Setting up libproc2-0:s390x (2:4.0.4-4ubuntu2) ... 354s Setting up libblockdev-utils3:s390x (3.1.0-1build1) ... 354s Setting up fonts-dejavu-mono (2.37-8) ... 354s Setting up libpng16-16t64:s390x (1.6.43-3) ... 354s Setting up systemd-timesyncd (255.4-1ubuntu5) ... 354s Setting up libevent-core-2.1-7:s390x (2.1.12-stable-9build1) ... 354s Setting up udev (255.4-1ubuntu5) ... 355s Setting up libss2:s390x (1.47.0-2.4~exp1ubuntu2) ... 355s Setting up usb.ids (2024.03.18-1) ... 355s Setting up sudo (1.9.15p5-3ubuntu3) ... 355s Setting up fonts-dejavu-core (2.37-8) ... 355s Setting up dhcpcd-base (1:10.0.6-1ubuntu2) ... 355s Setting up libpcsclite1:s390x (2.0.3-1) ... 355s Setting up gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) ... 355s Setting up libk5crypto3:s390x (1.20.1-6ubuntu1) ... 355s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 355s Setting up logsave (1.47.0-2.4~exp1ubuntu2) ... 355s Setting up libwebp7:s390x (1.3.2-0.4build2) ... 355s Setting up libfdisk1:s390x (2.39.3-9ubuntu2) ... 355s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 355s Setting up libblockdev-nvme3:s390x (3.1.0-1build1) ... 355s Setting up libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) ... 355s Setting up libblockdev-fs3:s390x (3.1.0-1build1) ... 355s Setting up libaio1t64:s390x (0.3.113-6) ... 355s Setting up python-apt-common (2.7.7) ... 355s Setting up mount (2.39.3-9ubuntu2) ... 355s Setting up dmsetup (2:1.02.185-3ubuntu2) ... 355s Setting up uuid-runtime (2.39.3-9ubuntu2) ... 356s uuidd.service is a disabled or a static unit not running, not starting it. 356s Setting up libmm-glib0:s390x (1.23.4-0ubuntu1) ... 356s Setting up groff-base (1.23.0-3build1) ... 356s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 356s Setting up libplymouth5:s390x (24.004.60-1ubuntu6) ... 356s Setting up dbus-session-bus-common (1.14.10-4ubuntu2) ... 356s Setting up kpartx (0.9.4-5ubuntu6) ... 356s Setting up jq (1.7.1-3) ... 356s Setting up procps (2:4.0.4-4ubuntu2) ... 357s Setting up gpgconf (2.4.4-2ubuntu15) ... 357s Setting up libcryptsetup12:s390x (2:2.7.0-1ubuntu2) ... 357s Setting up libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) ... 357s Setting up libjson-glib-1.0-common (1.8.0-2build1) ... 357s Setting up libkrb5-3:s390x (1.20.1-6ubuntu1) ... 357s Setting up libusb-1.0-0:s390x (2:1.0.27-1) ... 357s Setting up libperl5.38t64:s390x (5.38.2-3.2) ... 357s Setting up tnftp (20230507-2build1) ... 357s Setting up libbinutils:s390x (2.42-4ubuntu1) ... 357s Setting up dbus-system-bus-common (1.14.10-4ubuntu2) ... 357s Setting up libfido2-1:s390x (1.14.0-1build1) ... 357s Setting up libc-dev-bin (2.39-0ubuntu6) ... 357s Setting up openssl (3.0.13-0ubuntu2) ... 357s Setting up linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 357s Setting up readline-common (8.2-4) ... 357s Setting up libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) ... 357s Setting up libxmuu1:s390x (2:1.1.3-3build1) ... 357s Setting up dbus-bin (1.14.10-4ubuntu2) ... 357s Setting up info (7.1-3build1) ... 357s Setting up liblocale-gettext-perl (1.07-6ubuntu4) ... 357s Setting up gpg (2.4.4-2ubuntu15) ... 357s Setting up libgudev-1.0-0:s390x (1:238-3ubuntu2) ... 357s Setting up libpolkit-gobject-1-0:s390x (124-1ubuntu1) ... 357s Setting up libbpf1:s390x (1:1.3.0-2build1) ... 357s Setting up libmbim-glib4:s390x (1.31.2-0ubuntu2) ... 357s Setting up rsync (3.2.7-1build1) ... 359s rsync.service is a disabled or a static unit not running, not starting it. 359s Setting up libudisks2-0:s390x (2.10.1-6) ... 359s Setting up util-linux-extra (2.39.3-9ubuntu2) ... 359s Setting up bolt (0.9.6-2build1) ... 359s bolt.service is a disabled or a static unit not running, not starting it. 359s Setting up s390-tools-data (2.31.0-0ubuntu3) ... 359s Setting up libllvm18:s390x (1:18.1.2-1ubuntu2) ... 359s Setting up gnupg-utils (2.4.4-2ubuntu15) ... 359s Setting up initramfs-tools-bin (0.142ubuntu23) ... 359s Setting up libctf0:s390x (2.42-4ubuntu1) ... 359s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 359s Setting up cryptsetup-bin (2:2.7.0-1ubuntu2) ... 359s Setting up libclang1-18 (1:18.1.2-1ubuntu2) ... 359s Setting up manpages-dev (6.05.01-1) ... 359s Setting up linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 360s Setting up apt-utils (2.7.14) ... 360s Setting up binutils-s390x-linux-gnu (2.42-4ubuntu1) ... 360s Setting up gpg-agent (2.4.4-2ubuntu15) ... 360s Setting up libpython3.12-stdlib:s390x (3.12.2-4build3) ... 360s Setting up libblockdev-mdraid3:s390x (3.1.0-1build1) ... 360s Setting up wget (1.21.4-1ubuntu2) ... 360s Setting up linux-image-6.8.0-20-generic (6.8.0-20.20) ... 361s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-20-generic 361s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-20-generic 361s Setting up libblockdev-swap3:s390x (3.1.0-1build1) ... 361s Setting up plymouth (24.004.60-1ubuntu6) ... 361s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 361s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 367s Not invoking zipl: initrd doesn't exist yet 367s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 368s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 368s Setting up fontconfig-config (2.15.0-1.1ubuntu1) ... 368s Setting up libxmlb2:s390x (0.3.15-1build1) ... 368s Setting up python3.12 (3.12.2-4build3) ... 370s Setting up libblockdev-loop3:s390x (3.1.0-1build1) ... 370s Setting up gpgsm (2.4.4-2ubuntu15) ... 370s Setting up inetutils-telnet (2:2.5-3ubuntu3) ... 370s Setting up libreiserfscore0t64 (1:3.6.27-7.1) ... 370s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu2) ... 370s update-initramfs: deferring update (trigger activated) 370s e2scrub_all.service is a disabled or a static unit not running, not starting it. 370s Setting up libparted2t64:s390x (3.6-3.1build2) ... 370s Setting up linux-headers-generic (6.8.0-20.20+1) ... 370s Setting up dbus-daemon (1.14.10-4ubuntu2) ... 370s Setting up binutils (2.42-4ubuntu1) ... 370s Setting up libmbim-proxy (1.31.2-0ubuntu2) ... 370s Setting up vim-tiny (2:9.1.0016-1ubuntu6) ... 370s Setting up libnetplan1:s390x (1.0-1) ... 370s Setting up man-db (2.12.0-3build4) ... 370s Updating database of manual pages ... 373s man-db.service is a disabled or a static unit not running, not starting it. 373s Setting up libblockdev3:s390x (3.1.0-1build1) ... 373s Setting up fdisk (2.39.3-9ubuntu2) ... 373s Setting up multipath-tools (0.9.4-5ubuntu6) ... 374s Setting up libjson-glib-1.0-0:s390x (1.8.0-2build1) ... 374s Setting up libblockdev-part3:s390x (3.1.0-1build1) ... 374s Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) ... 374s Setting up hwdata (0.379-1) ... 374s Setting up wpasupplicant (2:2.10-21build2) ... 374s Setting up libftdi1-2:s390x (1.5-6build4) ... 374s Setting up perl (5.38.2-3.2) ... 374s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) ... 374s update-initramfs: deferring update (trigger activated) 374s Setting up libfreetype6:s390x (2.13.2+dfsg-1build2) ... 374s Setting up gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) ... 374s Setting up dbus (1.14.10-4ubuntu2) ... 375s A reboot is required to replace the running dbus-daemon. 375s Please reboot the system when convenient. 375s Setting up shared-mime-info (2.4-1build1) ... 376s Setting up libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) ... 376s Setting up ftp (20230507-2build1) ... 376s Setting up keyboxd (2.4.4-2ubuntu15) ... 376s Setting up libdpkg-perl (1.22.6ubuntu5) ... 376s Setting up libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) ... 376s Setting up libssh-4:s390x (0.10.6-2build1) ... 376s Setting up ieee-data (20220827.1) ... 376s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 376s Setting up libpam-systemd:s390x (255.4-1ubuntu5) ... 376s Setting up libpolkit-agent-1-0:s390x (124-1ubuntu1) ... 376s Setting up libc6-dev:s390x (2.39-0ubuntu6) ... 376s Setting up libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 376s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 376s Setting up linux-image-virtual (6.8.0-20.20+1) ... 376s Setting up netplan-generator (1.0-1) ... 376s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 376s Setting up initramfs-tools-core (0.142ubuntu23) ... 376s Setting up libclang-cpp18 (1:18.1.2-1ubuntu2) ... 376s Setting up libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 376s Setting up linux-tools-common (6.8.0-20.20) ... 376s Setting up libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 376s Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) ... 376s Setting up libpython3-stdlib:s390x (3.12.2-0ubuntu1) ... 376s Setting up systemd-resolved (255.4-1ubuntu5) ... 377s Setting up linux-image-generic (6.8.0-20.20+1) ... 377s Setting up telnet (0.17+2.5-3ubuntu3) ... 377s Setting up initramfs-tools (0.142ubuntu23) ... 377s update-initramfs: deferring update (trigger activated) 377s Setting up linux-headers-virtual (6.8.0-20.20+1) ... 377s Setting up linux-generic (6.8.0-20.20+1) ... 377s Setting up libcurl4t64:s390x (8.5.0-2ubuntu8) ... 377s Setting up bpftrace (0.20.2-1ubuntu1) ... 377s Setting up bind9-libs:s390x (1:9.18.24-0ubuntu3) ... 377s Setting up libtirpc3t64:s390x (1.3.4+ds-1.1) ... 377s Setting up iproute2 (6.1.0-1ubuntu5) ... 377s Setting up openssh-client (1:9.6p1-3ubuntu11) ... 377s Setting up libgusb2:s390x (0.4.8-1build1) ... 377s Setting up btrfs-progs (6.6.3-1.1build1) ... 377s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 377s Setting up parted (3.6-3.1build2) ... 377s Setting up libqmi-glib5:s390x (1.35.2-0ubuntu1) ... 377s Setting up linux-tools-6.8.0-20 (6.8.0-20.20) ... 377s Setting up python3 (3.12.2-0ubuntu1) ... 378s Setting up libjcat1:s390x (0.2.0-2build2) ... 378s Setting up dpkg-dev (1.22.6ubuntu5) ... 378s Setting up linux-virtual (6.8.0-20.20+1) ... 378s Setting up dirmngr (2.4.4-2ubuntu15) ... 378s Setting up dbus-user-session (1.14.10-4ubuntu2) ... 378s Setting up linux-tools-6.8.0-20-generic (6.8.0-20.20) ... 378s Setting up python3-cryptography (41.0.7-4build2) ... 378s Setting up python3-gi (3.47.0-3build1) ... 379s Setting up libgd3:s390x (2.3.3-9ubuntu3) ... 379s Setting up lsof (4.95.0-1build2) ... 379s Setting up python3-pyrsistent:s390x (0.20.0-1build1) ... 379s Setting up python3-netaddr (0.8.0-2ubuntu1) ... 380s Setting up libnsl2:s390x (1.3.0-3build2) ... 380s Setting up gnupg (2.4.4-2ubuntu15) ... 380s Setting up python3-netplan (1.0-1) ... 380s Setting up curl (8.5.0-2ubuntu8) ... 380s Setting up libvolume-key1:s390x (0.3.12-7build1) ... 380s Setting up bind9-host (1:9.18.24-0ubuntu3) ... 380s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ... 380s Setting up python3-bpfcc (0.29.1+ds-1ubuntu4) ... 380s Setting up libc-devtools (2.39-0ubuntu6) ... 380s Setting up python3-pkg-resources (68.1.2-2ubuntu1) ... 381s Setting up python3-distutils (3.12.2-3ubuntu1.1) ... 381s python3.12: can't get files for byte-compilation 381s Setting up openssh-sftp-server (1:9.6p1-3ubuntu11) ... 381s Setting up python3-dbus (1.3.2-5build2) ... 381s Setting up python3-setuptools (68.1.2-2ubuntu1) ... 382s Setting up gpg-wks-client (2.4.4-2ubuntu15) ... 382s Setting up openssh-server (1:9.6p1-3ubuntu11) ... 383s Replacing config file /etc/ssh/sshd_config with new version 385s Created symlink /etc/systemd/system/ssh.service.requires/ssh.socket → /usr/lib/systemd/system/ssh.socket. 387s Setting up libblockdev-crypto3:s390x (3.1.0-1build1) ... 387s Setting up python3-gdbm:s390x (3.12.2-3ubuntu1.1) ... 387s Setting up python3-apt (2.7.7) ... 388s Setting up libfwupd2:s390x (1.9.15-2) ... 388s Setting up python3-yaml (6.0.1-2build1) ... 388s Setting up libqmi-proxy (1.35.2-0ubuntu1) ... 388s Setting up netplan.io (1.0-1) ... 388s Setting up bpfcc-tools (0.29.1+ds-1ubuntu4) ... 388s Setting up bind9-dnsutils (1:9.18.24-0ubuntu3) ... 388s Setting up ubuntu-pro-client (31.2.2) ... 390s Setting up fwupd (1.9.15-2) ... 391s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 391s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 391s Setting up ubuntu-pro-client-l10n (31.2.2) ... 391s Setting up udisks2 (2.10.1-6) ... 392s Processing triggers for ufw (0.36.2-5) ... 392s Processing triggers for debianutils (5.17) ... 392s Processing triggers for install-info (7.1-3build1) ... 392s Processing triggers for libc-bin (2.39-0ubuntu6) ... 392s Processing triggers for linux-image-6.8.0-20-generic (6.8.0-20.20) ... 392s /etc/kernel/postinst.d/initramfs-tools: 392s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 392s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 398s Using config file '/etc/zipl.conf' 398s Building bootmap in '/boot' 398s Adding IPL section 'ubuntu' (default) 398s Preparing boot device for LD-IPL: sda. 398s Done. 398s /etc/kernel/postinst.d/zz-zipl: 398s Using config file '/etc/zipl.conf' 398s Building bootmap in '/boot' 398s Adding IPL section 'ubuntu' (default) 398s Preparing boot device for LD-IPL: sda. 398s Done. 398s Processing triggers for initramfs-tools (0.142ubuntu23) ... 398s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 398s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 404s Using config file '/etc/zipl.conf' 404s Building bootmap in '/boot' 404s Adding IPL section 'ubuntu' (default) 404s Preparing boot device for LD-IPL: sda. 404s Done. 407s Reading package lists... 408s Building dependency tree... 408s Reading state information... 408s The following packages will be REMOVED: 408s libaio1* libnetplan0* 409s 0 upgraded, 0 newly installed, 2 to remove and 1 not upgraded. 409s After this operation, 411 kB disk space will be freed. 409s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81395 files and directories currently installed.) 409s Removing libaio1:s390x (0.3.113-5) ... 409s Removing libnetplan0:s390x (0.107.1-3) ... 409s Processing triggers for libc-bin (2.39-0ubuntu6) ... 410s autopkgtest [02:01:16]: rebooting testbed after setup commands that affected boot 460s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 464s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 472s autopkgtest [02:02:18]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP Mon Mar 18 10:49:25 UTC 2024 475s autopkgtest [02:02:21]: @@@@@@@@@@@@@@@@@@@@ apt-source ray 480s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/universe ray 2.3.1-8build1 (dsc) [2229 B] 480s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe ray 2.3.1-8build1 (tar) [450 kB] 480s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe ray 2.3.1-8build1 (diff) [213 kB] 480s gpgv: Signature made Wed Mar 13 18:35:20 2024 UTC 480s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D 480s gpgv: issuer "steve.langasek@ubuntu.com" 480s gpgv: Can't check signature: No public key 480s dpkg-source: warning: cannot verify inline signature for ./ray_2.3.1-8build1.dsc: no acceptable signature found 481s autopkgtest [02:02:27]: testing package ray version 2.3.1-8build1 485s autopkgtest [02:02:31]: build not needed 489s autopkgtest [02:02:35]: test run-unit-test: preparing testbed 492s Reading package lists... 492s Building dependency tree... 492s Reading state information... 493s Starting pkgProblemResolver with broken count: 0 493s Starting 2 pkgProblemResolver with broken count: 0 493s Done 493s The following additional packages will be installed: 493s fontconfig libatomic1 libblas3 libcairo2 libdatrie1 libevent-pthreads-2.1-7 493s libfabric1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 493s libhwloc-plugins libhwloc15 libice6 liblapack3 libmunge2 libopenmpi3t64 493s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 493s libpaper1 libpciaccess0 libpixman-1-0 libpmix2t64 librdmacm1t64 libsm6 493s libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0 libxft2 493s libxnvctrl0 libxrender1 libxss1 libxt6t64 mpi-default-bin ocl-icd-libopencl1 493s openmpi-bin openmpi-common r-base-core ray ray-doc ray-extra unzip 493s x11-common xdg-utils zip 493s Suggested packages: 493s tcl8.6 tk8.6 opencl-icd gfortran | fortran-compiler elpa-ess r-doc-info 493s | r-doc-pdf r-mathlib r-base-html 493s Recommended packages: 493s r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl 493s libx11-protocol-perl x11-utils x11-xserver-utils 493s The following NEW packages will be installed: 493s autopkgtest-satdep fontconfig libatomic1 libblas3 libcairo2 libdatrie1 493s libevent-pthreads-2.1-7 libfabric1 libgfortran5 libgomp1 libgraphite2-3 493s libharfbuzz0b libhwloc-plugins libhwloc15 libice6 liblapack3 libmunge2 493s libopenmpi3t64 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 493s libpaper-utils libpaper1 libpciaccess0 libpixman-1-0 libpmix2t64 493s librdmacm1t64 libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 493s libxcb-shm0 libxft2 libxnvctrl0 libxrender1 libxss1 libxt6t64 493s mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common r-base-core 493s ray ray-doc ray-extra unzip x11-common xdg-utils zip 493s 0 upgraded, 51 newly installed, 0 to remove and 1 not upgraded. 493s Need to get 41.0 MB/41.0 MB of archives. 493s After this operation, 87.1 MB of additional disk space will be used. 493s Get:1 /tmp/autopkgtest.GwoKJq/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B] 494s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fontconfig s390x 2.15.0-1.1ubuntu1 [191 kB] 494s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libatomic1 s390x 14-20240315-1ubuntu1 [9396 B] 494s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 494s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 494s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 494s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 494s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 494s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcairo2 s390x 1.18.0-1ubuntu1 [589 kB] 494s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 494s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-pthreads-2.1-7 s390x 2.1.12-stable-9build1 [7778 B] 494s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librdmacm1t64 s390x 50.0-2build1 [74.1 kB] 494s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x libfabric1 s390x 1.17.0-3build1 [566 kB] 494s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgfortran5 s390x 14-20240315-1ubuntu1 [600 kB] 494s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgomp1 s390x 14-20240315-1ubuntu1 [151 kB] 494s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 494s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libharfbuzz0b s390x 8.3.0-2build1 [515 kB] 494s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc15 s390x 2.10.0-1 [174 kB] 494s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 494s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 494s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 495s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libmunge2 s390x 0.5.15-4 [15.6 kB] 495s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libpciaccess0 s390x 0.17-3 [18.5 kB] 495s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu3 [12.7 kB] 495s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1 [39.1 kB] 495s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc-plugins s390x 2.10.0-1 [16.1 kB] 495s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libpmix2t64 s390x 5.0.1-4.1 [727 kB] 495s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libopenmpi3t64 s390x 4.1.6-7ubuntu1 [2437 kB] 495s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 495s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 495s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpango-1.0-0 s390x 1.52.1+ds-1 [242 kB] 495s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangoft2-1.0-0 s390x 1.52.1+ds-1 [44.2 kB] 495s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangocairo-1.0-0 s390x 1.52.1+ds-1 [28.7 kB] 495s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 495s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 495s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 495s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtcl8.6 s390x 8.6.14+dfsg-1 [1037 kB] 495s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 495s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 495s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.14-1 [833 kB] 495s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxt6t64 s390x 1:1.2.1-1.2 [184 kB] 495s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-common all 4.1.6-7ubuntu1 [170 kB] 495s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-bin s390x 4.1.6-7ubuntu1 [84.5 kB] 495s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 495s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 495s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 495s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-base-core s390x 4.3.3-2build1 [27.1 MB] 498s Get:48 http://ftpmaster.internal/ubuntu noble/universe s390x mpi-default-bin s390x 1.15 [2338 B] 498s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x ray s390x 2.3.1-8build1 [783 kB] 498s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x ray-doc all 2.3.1-8build1 [35.2 kB] 498s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x ray-extra all 2.3.1-8build1 [12.3 kB] 499s Preconfiguring packages ... 499s Fetched 41.0 MB in 5s (8294 kB/s) 499s Selecting previously unselected package fontconfig. 500s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81386 files and directories currently installed.) 500s Preparing to unpack .../00-fontconfig_2.15.0-1.1ubuntu1_s390x.deb ... 500s Unpacking fontconfig (2.15.0-1.1ubuntu1) ... 500s Selecting previously unselected package libatomic1:s390x. 500s Preparing to unpack .../01-libatomic1_14-20240315-1ubuntu1_s390x.deb ... 500s Unpacking libatomic1:s390x (14-20240315-1ubuntu1) ... 500s Selecting previously unselected package libblas3:s390x. 500s Preparing to unpack .../02-libblas3_3.12.0-3_s390x.deb ... 500s Unpacking libblas3:s390x (3.12.0-3) ... 500s Selecting previously unselected package libpixman-1-0:s390x. 500s Preparing to unpack .../03-libpixman-1-0_0.42.2-1_s390x.deb ... 500s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 500s Selecting previously unselected package libxcb-render0:s390x. 500s Preparing to unpack .../04-libxcb-render0_1.15-1_s390x.deb ... 500s Unpacking libxcb-render0:s390x (1.15-1) ... 500s Selecting previously unselected package libxcb-shm0:s390x. 500s Preparing to unpack .../05-libxcb-shm0_1.15-1_s390x.deb ... 500s Unpacking libxcb-shm0:s390x (1.15-1) ... 500s Selecting previously unselected package libxrender1:s390x. 500s Preparing to unpack .../06-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 500s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 500s Selecting previously unselected package libcairo2:s390x. 500s Preparing to unpack .../07-libcairo2_1.18.0-1ubuntu1_s390x.deb ... 500s Unpacking libcairo2:s390x (1.18.0-1ubuntu1) ... 500s Selecting previously unselected package libdatrie1:s390x. 500s Preparing to unpack .../08-libdatrie1_0.2.13-3_s390x.deb ... 500s Unpacking libdatrie1:s390x (0.2.13-3) ... 500s Selecting previously unselected package libevent-pthreads-2.1-7:s390x. 500s Preparing to unpack .../09-libevent-pthreads-2.1-7_2.1.12-stable-9build1_s390x.deb ... 500s Unpacking libevent-pthreads-2.1-7:s390x (2.1.12-stable-9build1) ... 500s Selecting previously unselected package librdmacm1t64:s390x. 500s Preparing to unpack .../10-librdmacm1t64_50.0-2build1_s390x.deb ... 500s Unpacking librdmacm1t64:s390x (50.0-2build1) ... 500s Selecting previously unselected package libfabric1:s390x. 500s Preparing to unpack .../11-libfabric1_1.17.0-3build1_s390x.deb ... 500s Unpacking libfabric1:s390x (1.17.0-3build1) ... 500s Selecting previously unselected package libgfortran5:s390x. 500s Preparing to unpack .../12-libgfortran5_14-20240315-1ubuntu1_s390x.deb ... 500s Unpacking libgfortran5:s390x (14-20240315-1ubuntu1) ... 500s Selecting previously unselected package libgomp1:s390x. 500s Preparing to unpack .../13-libgomp1_14-20240315-1ubuntu1_s390x.deb ... 500s Unpacking libgomp1:s390x (14-20240315-1ubuntu1) ... 500s Selecting previously unselected package libgraphite2-3:s390x. 500s Preparing to unpack .../14-libgraphite2-3_1.3.14-2_s390x.deb ... 500s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 500s Selecting previously unselected package libharfbuzz0b:s390x. 500s Preparing to unpack .../15-libharfbuzz0b_8.3.0-2build1_s390x.deb ... 500s Unpacking libharfbuzz0b:s390x (8.3.0-2build1) ... 500s Selecting previously unselected package libhwloc15:s390x. 500s Preparing to unpack .../16-libhwloc15_2.10.0-1_s390x.deb ... 500s Unpacking libhwloc15:s390x (2.10.0-1) ... 500s Selecting previously unselected package x11-common. 500s Preparing to unpack .../17-x11-common_1%3a7.7+23ubuntu2_all.deb ... 500s Unpacking x11-common (1:7.7+23ubuntu2) ... 500s Selecting previously unselected package libice6:s390x. 500s Preparing to unpack .../18-libice6_2%3a1.0.10-1build2_s390x.deb ... 500s Unpacking libice6:s390x (2:1.0.10-1build2) ... 500s Selecting previously unselected package liblapack3:s390x. 500s Preparing to unpack .../19-liblapack3_3.12.0-3_s390x.deb ... 500s Unpacking liblapack3:s390x (3.12.0-3) ... 500s Selecting previously unselected package libmunge2:s390x. 500s Preparing to unpack .../20-libmunge2_0.5.15-4_s390x.deb ... 500s Unpacking libmunge2:s390x (0.5.15-4) ... 500s Selecting previously unselected package libpciaccess0:s390x. 500s Preparing to unpack .../21-libpciaccess0_0.17-3_s390x.deb ... 500s Unpacking libpciaccess0:s390x (0.17-3) ... 500s Selecting previously unselected package libxnvctrl0:s390x. 500s Preparing to unpack .../22-libxnvctrl0_510.47.03-0ubuntu3_s390x.deb ... 500s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu3) ... 501s Selecting previously unselected package ocl-icd-libopencl1:s390x. 501s Preparing to unpack .../23-ocl-icd-libopencl1_2.3.2-1_s390x.deb ... 501s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1) ... 501s Selecting previously unselected package libhwloc-plugins:s390x. 501s Preparing to unpack .../24-libhwloc-plugins_2.10.0-1_s390x.deb ... 501s Unpacking libhwloc-plugins:s390x (2.10.0-1) ... 501s Selecting previously unselected package libpmix2t64:s390x. 501s Preparing to unpack .../25-libpmix2t64_5.0.1-4.1_s390x.deb ... 501s Unpacking libpmix2t64:s390x (5.0.1-4.1) ... 501s Selecting previously unselected package libopenmpi3t64:s390x. 501s Preparing to unpack .../26-libopenmpi3t64_4.1.6-7ubuntu1_s390x.deb ... 501s Unpacking libopenmpi3t64:s390x (4.1.6-7ubuntu1) ... 501s Selecting previously unselected package libthai-data. 501s Preparing to unpack .../27-libthai-data_0.1.29-2_all.deb ... 501s Unpacking libthai-data (0.1.29-2) ... 501s Selecting previously unselected package libthai0:s390x. 501s Preparing to unpack .../28-libthai0_0.1.29-2_s390x.deb ... 501s Unpacking libthai0:s390x (0.1.29-2) ... 501s Selecting previously unselected package libpango-1.0-0:s390x. 501s Preparing to unpack .../29-libpango-1.0-0_1.52.1+ds-1_s390x.deb ... 501s Unpacking libpango-1.0-0:s390x (1.52.1+ds-1) ... 501s Selecting previously unselected package libpangoft2-1.0-0:s390x. 501s Preparing to unpack .../30-libpangoft2-1.0-0_1.52.1+ds-1_s390x.deb ... 501s Unpacking libpangoft2-1.0-0:s390x (1.52.1+ds-1) ... 501s Selecting previously unselected package libpangocairo-1.0-0:s390x. 501s Preparing to unpack .../31-libpangocairo-1.0-0_1.52.1+ds-1_s390x.deb ... 501s Unpacking libpangocairo-1.0-0:s390x (1.52.1+ds-1) ... 501s Selecting previously unselected package libpaper1:s390x. 501s Preparing to unpack .../32-libpaper1_1.1.29_s390x.deb ... 501s Unpacking libpaper1:s390x (1.1.29) ... 501s Selecting previously unselected package libpaper-utils. 501s Preparing to unpack .../33-libpaper-utils_1.1.29_s390x.deb ... 501s Unpacking libpaper-utils (1.1.29) ... 501s Selecting previously unselected package libsm6:s390x. 501s Preparing to unpack .../34-libsm6_2%3a1.2.3-1build2_s390x.deb ... 501s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 501s Selecting previously unselected package libtcl8.6:s390x. 501s Preparing to unpack .../35-libtcl8.6_8.6.14+dfsg-1_s390x.deb ... 501s Unpacking libtcl8.6:s390x (8.6.14+dfsg-1) ... 501s Selecting previously unselected package libxft2:s390x. 501s Preparing to unpack .../36-libxft2_2.3.6-1_s390x.deb ... 501s Unpacking libxft2:s390x (2.3.6-1) ... 501s Selecting previously unselected package libxss1:s390x. 501s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build2_s390x.deb ... 501s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 501s Selecting previously unselected package libtk8.6:s390x. 501s Preparing to unpack .../38-libtk8.6_8.6.14-1_s390x.deb ... 501s Unpacking libtk8.6:s390x (8.6.14-1) ... 501s Selecting previously unselected package libxt6t64:s390x. 501s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2_s390x.deb ... 501s Unpacking libxt6t64:s390x (1:1.2.1-1.2) ... 501s Selecting previously unselected package openmpi-common. 502s Preparing to unpack .../40-openmpi-common_4.1.6-7ubuntu1_all.deb ... 502s Unpacking openmpi-common (4.1.6-7ubuntu1) ... 502s Selecting previously unselected package openmpi-bin. 502s Preparing to unpack .../41-openmpi-bin_4.1.6-7ubuntu1_s390x.deb ... 502s Unpacking openmpi-bin (4.1.6-7ubuntu1) ... 502s Selecting previously unselected package zip. 502s Preparing to unpack .../42-zip_3.0-13_s390x.deb ... 502s Unpacking zip (3.0-13) ... 502s Selecting previously unselected package unzip. 502s Preparing to unpack .../43-unzip_6.0-28ubuntu3_s390x.deb ... 502s Unpacking unzip (6.0-28ubuntu3) ... 502s Selecting previously unselected package xdg-utils. 502s Preparing to unpack .../44-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 502s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 502s Selecting previously unselected package r-base-core. 502s Preparing to unpack .../45-r-base-core_4.3.3-2build1_s390x.deb ... 502s Unpacking r-base-core (4.3.3-2build1) ... 503s Selecting previously unselected package mpi-default-bin. 503s Preparing to unpack .../46-mpi-default-bin_1.15_s390x.deb ... 503s Unpacking mpi-default-bin (1.15) ... 503s Selecting previously unselected package ray. 503s Preparing to unpack .../47-ray_2.3.1-8build1_s390x.deb ... 503s Unpacking ray (2.3.1-8build1) ... 503s Selecting previously unselected package ray-doc. 503s Preparing to unpack .../48-ray-doc_2.3.1-8build1_all.deb ... 503s Unpacking ray-doc (2.3.1-8build1) ... 503s Selecting previously unselected package ray-extra. 503s Preparing to unpack .../49-ray-extra_2.3.1-8build1_all.deb ... 503s Unpacking ray-extra (2.3.1-8build1) ... 503s Selecting previously unselected package autopkgtest-satdep. 503s Preparing to unpack .../50-1-autopkgtest-satdep.deb ... 503s Unpacking autopkgtest-satdep (0) ... 503s Setting up libgraphite2-3:s390x (1.3.14-2) ... 503s Setting up libpixman-1-0:s390x (0.42.2-1) ... 503s Setting up libpaper1:s390x (1.1.29) ... 503s 503s Creating config file /etc/papersize with new version 503s Setting up ray-doc (2.3.1-8build1) ... 503s Setting up libpciaccess0:s390x (0.17-3) ... 503s Setting up fontconfig (2.15.0-1.1ubuntu1) ... 506s Regenerating fonts cache... done. 506s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 506s Setting up libdatrie1:s390x (0.2.13-3) ... 506s Setting up libxcb-render0:s390x (1.15-1) ... 506s Setting up unzip (6.0-28ubuntu3) ... 506s Setting up x11-common (1:7.7+23ubuntu2) ... 506s Setting up libxcb-shm0:s390x (1.15-1) ... 506s Setting up libpaper-utils (1.1.29) ... 506s Setting up libgomp1:s390x (14-20240315-1ubuntu1) ... 506s Setting up libcairo2:s390x (1.18.0-1ubuntu1) ... 506s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu3) ... 506s Setting up zip (3.0-13) ... 506s Setting up libblas3:s390x (3.12.0-3) ... 506s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 506s Setting up libmunge2:s390x (0.5.15-4) ... 506s Setting up libhwloc15:s390x (2.10.0-1) ... 506s Setting up libatomic1:s390x (14-20240315-1ubuntu1) ... 506s Setting up libtcl8.6:s390x (8.6.14+dfsg-1) ... 506s Setting up libgfortran5:s390x (14-20240315-1ubuntu1) ... 506s Setting up ocl-icd-libopencl1:s390x (2.3.2-1) ... 506s Setting up openmpi-common (4.1.6-7ubuntu1) ... 506s Setting up librdmacm1t64:s390x (50.0-2build1) ... 506s Setting up libharfbuzz0b:s390x (8.3.0-2build1) ... 506s Setting up libthai-data (0.1.29-2) ... 506s Setting up libxss1:s390x (1:1.2.3-1build2) ... 506s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 506s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 506s Setting up libevent-pthreads-2.1-7:s390x (2.1.12-stable-9build1) ... 506s Setting up libfabric1:s390x (1.17.0-3build1) ... 506s Setting up libice6:s390x (2:1.0.10-1build2) ... 506s Setting up liblapack3:s390x (3.12.0-3) ... 506s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 506s Setting up libxft2:s390x (2.3.6-1) ... 506s Setting up libtk8.6:s390x (8.6.14-1) ... 506s Setting up libhwloc-plugins:s390x (2.10.0-1) ... 506s Setting up libthai0:s390x (0.1.29-2) ... 506s Setting up libpmix2t64:s390x (5.0.1-4.1) ... 506s Setting up libopenmpi3t64:s390x (4.1.6-7ubuntu1) ... 506s Setting up libsm6:s390x (2:1.2.3-1build2) ... 506s Setting up openmpi-bin (4.1.6-7ubuntu1) ... 506s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 506s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 506s Setting up libpango-1.0-0:s390x (1.52.1+ds-1) ... 506s Setting up mpi-default-bin (1.15) ... 506s Setting up libxt6t64:s390x (1:1.2.1-1.2) ... 506s Setting up ray (2.3.1-8build1) ... 506s Setting up libpangoft2-1.0-0:s390x (1.52.1+ds-1) ... 506s Setting up libpangocairo-1.0-0:s390x (1.52.1+ds-1) ... 506s Setting up r-base-core (4.3.3-2build1) ... 506s 506s Creating config file /etc/R/Renviron with new version 507s Setting up ray-extra (2.3.1-8build1) ... 507s Setting up autopkgtest-satdep (0) ... 507s Processing triggers for man-db (2.12.0-3build4) ... 509s Processing triggers for install-info (7.1-3build1) ... 509s Processing triggers for libc-bin (2.39-0ubuntu6) ... 515s (Reading database ... 83764 files and directories currently installed.) 516s Removing autopkgtest-satdep (0) ... 516s autopkgtest [02:03:02]: test run-unit-test: [----------------------- 517s 517s ************************************************** 517s This program comes with ABSOLUTELY NO WARRANTY. 517s This is free software, and you are welcome to redistribute it 517s under certain conditions; see "LICENSE.txt" for details. 517s ************************************************** 517s 517s Ray Copyright (C) 2010, 2011, 2012, 2013 Sébastien Boisvert 517s Centre de recherche en infectiologie de l'Université Laval 517s Project funded by the Canadian Institutes of Health Research (Doctoral award 200902CGM-204212-172830 to S.B.) 517s http://denovoassembler.sf.net/ 517s 517s References to cite: 517s 517s Sébastien Boisvert, Frédéric Raymond, Élénie Godzaridis, François Laviolette and Jacques Corbeil. 517s Ray Meta: scalable de novo metagenome assembly and profiling. 517s Genome Biology (BioMed Central Ltd). 517s 13:R122, Published: 22 December 2012 517s http://dx.doi.org/doi:10.1186/gb-2012-13-12-r122 517s 517s Sébastien Boisvert, François Laviolette & Jacques Corbeil. 517s Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. 517s Journal of Computational Biology (Mary Ann Liebert, Inc. publishers, New York, U.S.A.). 517s November 2010, Volume 17, Issue 11, Pages 1519-1533. 517s http://dx.doi.org/doi:10.1089/cmb.2009.0238 517s 517s Ray version 2.3.1 517s License for Ray: GNU General Public License version 3 517s RayPlatform version: 2.0.1 517s License for RayPlatform: GNU Lesser General Public License version 3 517s 517s MAXKMERLENGTH: 32 517s Maximum coverage depth stored by CoverageDepth: 4294967295 517s MAXIMUM_MESSAGE_SIZE_IN_BYTES: 4000 bytes 517s FORCE_PACKING = n 517s ASSERT = n 517s HAVE_LIBZ = y 517s HAVE_LIBBZ2 = y 517s PROFILER_COLLECT = n 517s MINIRANKS = y 517s CLOCK_GETTIME = n 517s __linux__ = y 517s _MSC_VER = n 517s __GNUC__ = y 517s RAY_32_BITS = n 517s RAY_64_BITS = y 517s MPI standard version: MPI 3.1 517s MPI library: Open-MPI 4.1.6 517s Compiler: GNU gcc/g++ 13.2.0 517s MPI I/O: n 517s 517s 517s -k (to set the k-mer size) 517s Value: 31 517s 517s 517s Paired library # 0 517s -p (paired-end sequences) 517s Left sequences: ecoli_1K_1.fq 517s Right sequences: ecoli_1K_2.fq 517s Average length: automatic detection 517s Standard deviation: automatic detection 517s 517s Ray command: 517s mpiexec -n 1 Ray \ 517s -k \ 517s 31 \ 517s -p \ 517s ecoli_1K_1.fq \ 517s ecoli_1K_2.fq \ 517s -o \ 517s test1 517s 517s Rank 0 wrote test1/RayCommand.txt 517s 517s k-mer length: 31 517s Rank 0: assembler memory usage: 41912 KiB 517s Rank 0: assembler memory usage: 107744 KiB 517s Rank 0: Rank= 0 Size= 1 ProcessIdentifier= 2599 517s Rank 0: testing the network, please wait... 517s 517s Rank 0 is testing the network [0/1000] 517s Rank 0 is testing the network [1000/1000] 517s Rank 0: mode round trip latency when requesting a reply for a message of 4000 bytes is 2 microseconds (10^-6 seconds) 517s Rank 0: average round trip latency when requesting a reply for a message of 4000 bytes is 2 microseconds (10^-6 seconds) 517s 517s Rank 0 wrote test1/NetworkTest.txt 517s 517s 517s *** 517s Step: Network testing 517s Date: Wed Mar 27 02:03:03 2024 517s Elapsed time: 0 seconds 517s Since beginning: 0 seconds 517s *** 517s 517s 517s Rank 0 is fetching file ecoli_1K_1.fq with lazy loading (please wait...) 517s Rank 0: File ecoli_1K_1.fq (Number 0) has 2054 sequences 517s Rank 0 is fetching file ecoli_1K_2.fq with lazy loading (please wait...) 517s Rank 0: File ecoli_1K_2.fq (Number 1) has 2054 sequences 517s Rank 0 wrote test1/NumberOfSequences.txt 517s Rank 0 wrote test1/SequencePartition.txt 517s 517s *** 517s Step: Counting sequences to assemble 517s Date: Wed Mar 27 02:03:03 2024 517s Elapsed time: 0 seconds 517s Since beginning: 0 seconds 517s *** 517s 517s 517s Rank 0 is loading sequence reads 517s Rank 0 : partition is [0;4107], 4108 sequence reads 517s Rank 0 is fetching file ecoli_1K_1.fq with lazy loading (please wait...) 517s Rank 0 has 0 sequence reads 517s Rank 0: assembler memory usage: 120636 KiB 517s Rank 0 is fetching file ecoli_1K_2.fq with lazy loading (please wait...) 517s Rank 0 has 4108 sequence reads (completed) 517s 517s *** 517s Step: Sequence loading 517s Date: Wed Mar 27 02:03:03 2024 517s Elapsed time: 0 seconds 517s Since beginning: 0 seconds 517s *** 517s 517s 517s [BloomFilter] allocated 254696 bytes for table with 2037568 bits 517s Rank 0 created its Bloom filter 517s Rank 0 is counting k-mers in sequence reads [1/4108] 517s Rank 0 is counting k-mers in sequence reads [4108/4108] (completed) 517s Rank 0 : VirtualCommunicator (service provided by BufferedData): 230710 virtual messages generated 462 real messages (0.200251%) 517s 517s 517s *** 517s Step: K-mer counting 517s Date: Wed Mar 27 02:03:03 2024 517s Elapsed time: 0 seconds 517s Since beginning: 0 seconds 517s *** 517s 517s 517s Rank 0 number of set bits in the Bloom filter: [ 7801 / 2037568 ] (0.382858%) 517s Rank 0 destroyed its Bloom filter 517s Rank 0 has 1954 k-mers (completed) 517s [BloomFilter] Rank 0: k-mers sampled -> 1954, k-mers dropped -> 0 (0%), k-mers accepted -> 1954 (100%) 517s Rank 0: assembler memory usage: 117028 KiB 519s 519s 519s Rank 0: the minimum coverage is 3 519s Rank 0: the peak coverage is 3 519s Warning: no peak observed in the k-mer coverage distribution. 519s to deal with the sequencing error rate, try to lower the k-mer length (-k) 519s If you are using RNA-Seq or metagenomic data, then you can ignore this warning. 519s 519s *** 519s Step: Coverage distribution analysis 519s Date: Wed Mar 27 02:03:05 2024 519s Elapsed time: 2 seconds 519s Since beginning: 2 seconds 519s *** 519s 519s 519s 519s Rank 0 is adding edges [1/4108] 519s Rank 0 is adding edges [4108/4108] (completed) 519s Rank 0 : VirtualCommunicator (service provided by BufferedData): 453238 virtual messages generated 1813 real messages (0.400011%) 519s Rank 0 : VirtualCommunicator (service provided by BufferedData): 453238 virtual messages generated 1813 real messages (0.400011%) 519s 519s *** 519s Step: Graph construction 519s Date: Wed Mar 27 02:03:05 2024 519s Elapsed time: 0 seconds 519s Since beginning: 2 seconds 519s *** 519s 519s 519s Rank 0 has 1954 vertices (completed) 519s Rank 0: assembler memory usage: 117028 KiB 521s Rank 0 is purging edges [1/1954] 521s Rank 0 is purging edges [1954/1954] (completed) 521s Rank 0: assembler memory usage: 117556 KiB 521s VirtualProcessor: completed jobs: 1954 521s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 3904 virtual messages generated 11 real messages (0.281762%) 522s Rank 0 wrote test1/degreeDistribution.txt 522s 522s *** 522s Step: Null edge purging 522s Date: Wed Mar 27 02:03:08 2024 522s Elapsed time: 3 seconds 522s Since beginning: 5 seconds 522s *** 522s 522s 522s Rank 0 is selecting optimal read markers [1/4108] 522s Rank 0: assembler memory usage: 117556 KiB 522s Rank 0 is selecting optimal read markers [4108/4108] (completed) 522s Rank 0: peak number of workers: 599, maximum: 32768 522s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 238890 virtual messages generated 609 real messages (0.254929%) 522s Rank 0: assembler memory usage: 125684 KiB 522s Rank 0: Freeing unused assembler memory: 4096 KiB freed 522s Rank 0: assembler memory usage: 125684 KiB 522s 522s *** 522s Step: Selection of optimal read markers 522s Date: Wed Mar 27 02:03:08 2024 522s Elapsed time: 0 seconds 522s Since beginning: 5 seconds 522s *** 522s 522s 522s Rank 0: memory usage for optimal read markers= 4096 KiB 523s Rank 0 is creating seeds [1/1954] 523s Rank 0: assembler memory usage: 125684 KiB 524s Rank 0 has 1 seeds 524s Rank 0 is creating seeds [1954/1954] (completed) 524s Rank 0: peak number of workers: 746, maximum: 32768 524s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13612 virtual messages generated 1720 real messages (12.6359%) 524s Rank 0 runtime statistics for seeding algorithm: 524s Rank 0 Skipped paths because of dead end for head: 0 524s Rank 0 Skipped paths because of dead end for tail: 0 524s Rank 0 Skipped paths because of two dead ends: 0 524s Rank 0 Skipped paths because of bubble weak component: 0 524s Rank 0 Skipped paths because of short length: 1952 524s Rank 0 Skipped paths because of bad ownership: 1 524s Rank 0 Skipped paths because of low coverage: 0 524s Rank 0 Eligible paths: 1 524s Rank 0: assembler memory usage: 125684 KiB 524s Rank 0 has 1 seeds to register. 524s Rank 0 registered 0/1 524s Rank 0 registered 0/1 524s Rank 0 registered its seeds 524s VirtualProcessor: completed jobs: 0 524s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 525s Rank 0 freed 4194304 bytes from the path memory pool (chunks: 1) 535s Rank 0: gossiping generated 0 messages (gossips: 0 ---> 0) 535s Rank 0 merged its seeds: 1 seeds -> 1 seeds 535s 535s *** 535s Step: Detection of assembly seeds 535s Date: Wed Mar 27 02:03:21 2024 535s Elapsed time: 13 seconds 535s Since beginning: 18 seconds 535s *** 535s 535s 535s Rank 0 is calculating library lengths [1/1] 535s Rank 0 detected 1737 library lengths 535s Rank 0 is calculating library lengths [1/1] (completed) 535s Rank 0: peak number of workers: 1, maximum: 32768 535s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 7997 virtual messages generated 7997 real messages (100%) 535s Rank 0: assembler memory usage: 162552 KiB 535s Rank 0 : VirtualCommunicator (service provided by BufferedData): 67 virtual messages generated 1 real messages (1.49254%) 535s 535s Mode= 2 signalAverage= 9 535s CURRENT IS NOISE, 244 535s GOT HIT 212 535s 535s 535s Library # 0 (Automatic) -> average length: 214 and standard deviation: 10 535s 535s *** 535s Step: Estimation of outer distances for paired reads 535s Date: Wed Mar 27 02:03:21 2024 535s Elapsed time: 0 seconds 535s Since beginning: 18 seconds 535s *** 535s 535s 536s Rank 0 starts on seed 0, length is 845, flow 0 [0/1] 536s Rank 0 traversed 1000 nucleotide symbols 536s Rank 0: assembler memory usage: 166648 KiB 536s Rank 0 is extending seeds [1/1] (completed) 536s Rank 0 extended 1 seeds out of 1 (100.00%) 536s Rank 0: assembler memory usage: 158456 KiB 536s Rank 0 starting fusions 536s 536s *** 536s Step: Bidirectional extension of seeds 536s Date: Wed Mar 27 02:03:22 2024 536s Elapsed time: 1 seconds 536s Since beginning: 19 seconds 536s *** 536s 536s 536s Rank 0: starting clear step. cycleNumber= 0 537s Rank 0 adding 0 new fusions 537s Rank 0 cleared, 1 paths 537s Rank 0: starting distribution step 537s Rank 0 is distributing fusions [1/1] 537s Rank 0: assembler memory usage: 158456 KiB 537s Date: Wed Mar 27 02:03:23 2024 537s Rank 0 is distributing fusions [1/1] (completed) 537s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 537s Rank 0: assembler memory usage: 162552 KiB 537s Date: Wed Mar 27 02:03:23 2024 537s Rank 0 tells others to compute fusions. 537s Rank 0 FusionTaskCreator assignNextTask [0/2] 537s Rank 0: assembler memory usage: 162552 KiB 537s Date: Wed Mar 27 02:03:23 2024 537s Rank 0 FusionTaskCreator processWorkerResult [0/2] 537s Rank 0: assembler memory usage: 162552 KiB 537s Date: Wed Mar 27 02:03:23 2024 537s Rank 0 FusionTaskCreator [2/2] 537s Statistics: all paths: 1 eliminated during fusing: 0 537s Rank 0: assembler memory usage: 162552 KiB 537s VirtualProcessor: completed jobs: 2 537s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 10907 virtual messages generated 10907 real messages (100%) 537s Rank 0: starting clear step. cycleNumber= 1 539s Rank 0 adding 0 new fusions 539s Rank 0 cleared, 1 paths 539s Rank 0 is distributing fusions [1/1] 539s Rank 0: assembler memory usage: 162552 KiB 539s Date: Wed Mar 27 02:03:25 2024 539s Rank 0 is distributing fusions [1/1] (completed) 539s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 539s Rank 0: assembler memory usage: 162552 KiB 539s Date: Wed Mar 27 02:03:25 2024 539s Rank 0 JoinerTaskCreator assignNextTask [0/2] 539s Rank 0: assembler memory usage: 162552 KiB 539s Date: Wed Mar 27 02:03:25 2024 539s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 539s Rank 0: assembler memory usage: 162552 KiB 539s Date: Wed Mar 27 02:03:25 2024 539s Rank 0 JoinerTaskCreator [2/2] 539s Statistics: all paths: 1 eliminated during joining: 0 539s Rank 0: assembler memory usage: 162552 KiB 539s Date: Wed Mar 27 02:03:25 2024 539s VirtualProcessor: completed jobs: 2 539s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13817 virtual messages generated 13817 real messages (100%) 540s Rank 0 adding 0 new fusions 540s Rank 0 cleared, 1 paths 540s Rank 0: starting distribution step 540s Rank 0 is distributing fusions [1/1] 540s Rank 0: assembler memory usage: 162552 KiB 540s Date: Wed Mar 27 02:03:26 2024 540s Rank 0 is distributing fusions [1/1] (completed) 540s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 540s Rank 0: assembler memory usage: 162552 KiB 540s Date: Wed Mar 27 02:03:26 2024 540s Rank 0 tells others to compute fusions. 540s Rank 0 FusionTaskCreator assignNextTask [0/2] 540s Rank 0: assembler memory usage: 162552 KiB 540s Date: Wed Mar 27 02:03:26 2024 540s Rank 0 FusionTaskCreator processWorkerResult [0/2] 540s Rank 0: assembler memory usage: 162552 KiB 540s Date: Wed Mar 27 02:03:26 2024 540s Rank 0 FusionTaskCreator [2/2] 540s Statistics: all paths: 1 eliminated during fusing: 0 540s Rank 0: assembler memory usage: 162552 KiB 540s VirtualProcessor: completed jobs: 2 540s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 16727 virtual messages generated 16727 real messages (100%) 540s Rank 0: starting clear step. cycleNumber= 2 542s Rank 0 adding 0 new fusions 542s Rank 0 cleared, 1 paths 542s Rank 0 is distributing fusions [1/1] 542s Rank 0: assembler memory usage: 162552 KiB 542s Date: Wed Mar 27 02:03:27 2024 542s Rank 0 is distributing fusions [1/1] (completed) 542s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 542s Rank 0: assembler memory usage: 162552 KiB 542s Date: Wed Mar 27 02:03:27 2024 542s Rank 0 JoinerTaskCreator assignNextTask [0/2] 542s Rank 0: assembler memory usage: 162552 KiB 542s Date: Wed Mar 27 02:03:27 2024 542s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 542s Rank 0: assembler memory usage: 162552 KiB 542s Date: Wed Mar 27 02:03:28 2024 542s Rank 0 JoinerTaskCreator [2/2] 542s Statistics: all paths: 1 eliminated during joining: 0 542s Rank 0: assembler memory usage: 162552 KiB 542s Date: Wed Mar 27 02:03:28 2024 542s VirtualProcessor: completed jobs: 2 542s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 19637 virtual messages generated 19637 real messages (100%) 543s Rank 0 adding 0 new fusions 543s Rank 0 cleared, 1 paths 543s Rank 0: starting distribution step 543s Rank 0 is distributing fusions [1/1] 543s Rank 0: assembler memory usage: 162552 KiB 543s Date: Wed Mar 27 02:03:29 2024 543s Rank 0 is distributing fusions [1/1] (completed) 543s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 543s Rank 0: assembler memory usage: 162552 KiB 543s Date: Wed Mar 27 02:03:29 2024 543s Rank 0 cycleNumber= 2 543s 543s *** 543s Step: Merging of redundant paths 543s Date: Wed Mar 27 02:03:29 2024 543s Elapsed time: 7 seconds 543s Since beginning: 26 seconds 543s *** 543s 543s 543s Rank 0 appended 1 elements 543s 543s *** 543s Step: Generation of contigs 543s Date: Wed Mar 27 02:03:29 2024 543s Elapsed time: 0 seconds 543s Since beginning: 26 seconds 543s *** 543s 543s Rank 0 objectName: 0 => peakCoverage: 237 blockSize: 970 543s Rank 0: gathering scaffold links [1/1] [970/970] (completed) 543s Rank 0 ineligibleObjects: 0/970 (0.00%) 543s Rank 0: assembler memory usage: 162552 KiB 543s contig: 0 vertices: 970 averageCoverage: 237 standardDeviation: 115 peakCoverage: 237 repeatCoverage: 474 543s Rank 0 finished gathering scaffold links. 543s Rank 0 will write 1 contig lengths 543s Rank 0 will solve the scaffolding problem. 543s Welcome to GreedySolver v1.0 543s 1 vertices; 0 edges 543s 1 contigs >= 500 543s Edges in solution: 0 543s 543s Conflict statistics: 543s 1 scaffolds, 1 >= 500 543s Total: 1000 nucleotides 543s 543s *** 543s Step: Scaffolding of contigs 543s Date: Wed Mar 27 02:03:29 2024 543s Elapsed time: 0 seconds 543s Since beginning: 26 seconds 543s *** 543s 543s Rank 0 syncing with master 543s 543s *** 543s Step: Counting sequences to search 543s Date: Wed Mar 27 02:03:29 2024 543s Elapsed time: 0 seconds 543s Since beginning: 26 seconds 543s *** 543s 543s 543s Rank 0 will add colors, 0 sequences in 0 files to process 543s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0.00%) 545s 545s *** 545s Step: Graph coloring 545s Date: Wed Mar 27 02:03:31 2024 545s Elapsed time: 2 seconds 545s Since beginning: 28 seconds 545s *** 545s 545s 545s Rank 0: starting SlaveMode= call_RAY_SLAVE_MODE_CONTIG_BIOLOGICAL_ABUNDANCES 545s Rank 0 shares its counts 545s Rank 0 computing contig abundances [1/1] [1/970] 545s Rank 0 computing contig abundances [1/1] [970/970] 545s [IO] Input/output operations for coverage XML objects: 1 / bufferSize: 16777216 bytes 545s 545s *** 545s Step: Counting contig biological abundances 545s Date: Wed Mar 27 02:03:31 2024 545s Elapsed time: 0 seconds 545s Since beginning: 28 seconds 545s *** 545s 545s 545s Rank 0 colored the graph with 0 real colors using 1 virtual colors 545s Rank 0 : VirtualCommunicator (service provided by BufferedData): 3880 virtual messages generated 8 real messages (0.21%) 545s 545s *** 545s Step: Counting sequence biological abundances 545s Date: Wed Mar 27 02:03:31 2024 545s Elapsed time: 0 seconds 545s Since beginning: 28 seconds 545s *** 545s 545s 545s [IO] Input/output operations for sequence XML objects: 0 / bufferSize: 16777216 bytes 545s [IO] Input/output operations for identification TSV objects: 0 / bufferSize: 16777216 bytes 546s Rank 0 has exactly 0 k-mer physical colors for the phylogeny. 546s 546s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 546s Rank 0 is starting taxon syncing across the compute tribe. 546s 546s *** 546s Step: Loading taxons 546s Date: Wed Mar 27 02:03:32 2024 546s Elapsed time: 1 seconds 546s Since beginning: 29 seconds 546s *** 546s 546s Rank 0 synced taxons across the grid with 1 poor slaves. 546s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 546s Rank 0 has 0 taxons after syncing with master 547s 547s 547s *** 547s Step: Loading tree 547s Date: Wed Mar 27 02:03:33 2024 547s Elapsed time: 1 seconds 547s Since beginning: 30 seconds 547s *** 547s 549s Rank 0 has exactly 0 k-mer physical colors related to EMBL CDS objects. 549s 549s Rank 0: counting ontology terms in the graph... 550s Rank 0: 0 have some biological signal 550s Number of dereferenced alternate handles: 0 550s Number of k-mer observations with gene ontology terms: 0 550s Rank 0: synced ontology term profiles with master 550s Rank 0: synchronization is complete! 550s Rank 0: ontology terms with biological signal: 0 550s Populated recursive values... 550s Gene ontology terms without depth information: 0 550s [GeneOntology] maximum depth for GeneOntologyDomain  is 0 550s [GeneOntology] maximum depth for GeneOntologyDomain [GeneOntology] maximum depth for GeneOntologyDomain  is 0 550s 550s *** 550s Step: Processing gene ontologies 550s Date: Wed Mar 27 02:03:36 2024 550s Elapsed time: 3 seconds 550s Since beginning: 33 seconds 550s *** 550s 550s Rank 0: the CorePlugin GenomeNeighbourhood is disabled... 550s [GenomeNeighbourhood] in final list: 0 550s 550s *** 550s Step: Computing neighbourhoods 550s Date: Wed Mar 27 02:03:36 2024 550s Elapsed time: 0 seconds 550s Since beginning: 33 seconds 550s *** 550s 550s Contigs >= 100 nt 550s Number: 1 550s Total length: 1000 550s Average: 1000 550s N50: 1000 550s Median: 1000 550s Largest: 1000 550s Contigs >= 500 nt 550s Number: 1 550s Total length: 1000 550s Average: 1000 550s N50: 1000 550s Median: 1000 550s Largest: 1000 550s Scaffolds >= 100 nt 550s Number: 1 550s Total length: 1000 550s Average: 1000 550s N50: 1000 550s Median: 1000 550s Largest: 1000 550s Scaffolds >= 500 nt 550s Number: 1 550s Total length: 1000 550s Average: 1000 550s N50: 1000 550s Median: 1000 550s Largest: 1000 550s 550s Rank 0 wrote test1/Contigs.fasta 550s Rank 0 wrote test1/Scaffolds.fasta 550s Check for test1/* 550s 550s 550s 550s ************************************************** 550s This program comes with ABSOLUTELY NO WARRANTY. 550s This is free software, and you are welcome to redistribute it 550s under certain conditions; see "LICENSE.txt" for details. 550s ************************************************** 550s 550s Ray Copyright (C) 2010, 2011, 2012, 2013 Sébastien Boisvert 550s Centre de recherche en infectiologie de l'Université Laval 550s Project funded by the Canadian Institutes of Health Research (Doctoral award 200902CGM-204212-172830 to S.B.) 550s http://denovoassembler.sf.net/ 550s 550s References to cite: 550s 550s Sébastien Boisvert, Frédéric Raymond, Élénie Godzaridis, François Laviolette and Jacques Corbeil. 550s Ray Meta: scalable de novo metagenome assembly and profiling. 550s Genome Biology (BioMed Central Ltd). 550s 13:R122, Published: 22 December 2012 550s http://dx.doi.org/doi:10.1186/gb-2012-13-12-r122 550s 550s Sébastien Boisvert, François Laviolette & Jacques Corbeil. 550s Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. 550s Journal of Computational Biology (Mary Ann Liebert, Inc. publishers, New York, U.S.A.). 550s November 2010, Volume 17, Issue 11, Pages 1519-1533. 550s http://dx.doi.org/doi:10.1089/cmb.2009.0238 550s 550s Ray version 2.3.1 550s License for Ray: GNU General Public License version 3 550s RayPlatform version: 2.0.1 550s License for RayPlatform: GNU Lesser General Public License version 3 550s 550s MAXKMERLENGTH: 32 550s Maximum coverage depth stored by CoverageDepth: 4294967295 550s MAXIMUM_MESSAGE_SIZE_IN_BYTES: 4000 bytes 550s FORCE_PACKING = n 550s ASSERT = n 550s HAVE_LIBZ = y 550s HAVE_LIBBZ2 = y 550s PROFILER_COLLECT = n 550s MINIRANKS = y 550s CLOCK_GETTIME = n 550s __linux__ = y 550s _MSC_VER = n 550s __GNUC__ = y 550s RAY_32_BITS = n 550s RAY_64_BITS = y 550s MPI standard version: MPI 3.1 550s MPI library: Open-MPI 4.1.6 550s Compiler: GNU gcc/g++ 13.2.0 550s MPI I/O: n 550s 550s 550s -k (to set the k-mer size) 550s Value: 31 550s 550s 550s Paired library # 0 550s -p (paired-end sequences) 550s Left sequences: SampleDirectory/s_6.first1000_1.fastq 550s Right sequences: SampleDirectory/s_6.first1000_2.fastq 550s Average length: automatic detection 550s Standard deviation: automatic detection 550s 550s Ray command: 550s mpiexec -n 1 Ray \ 550s -k \ 550s 31 \ 550s -detect-sequence-files \ 550s SampleDirectory \ 550s -o \ 550s test2 550s 550s Rank 0 wrote test2/RayCommand.txt 550s 550s k-mer length: 31 550s Rank 0: assembler memory usage: 41928 KiB 550s Rank 0: assembler memory usage: 107748 KiB 550s Rank 0: Rank= 0 Size= 1 ProcessIdentifier= 2605 550s Rank 0: testing the network, please wait... 550s 550s Rank 0 is testing the network [0/1000] 550s Rank 0 is testing the network [1000/1000] 550s Rank 0: mode round trip latency when requesting a reply for a message of 4000 bytes is 1 microseconds (10^-6 seconds) 550s Rank 0: average round trip latency when requesting a reply for a message of 4000 bytes is 2 microseconds (10^-6 seconds) 550s 550s Rank 0 wrote test2/NetworkTest.txt 550s 550s 550s *** 550s Step: Network testing 550s Date: Wed Mar 27 02:03:36 2024 550s Elapsed time: 0 seconds 550s Since beginning: 0 seconds 550s *** 550s 550s 550s Rank 0 is fetching file SampleDirectory/s_6.first1000_1.fastq with lazy loading (please wait...) 550s Rank 0: File SampleDirectory/s_6.first1000_1.fastq (Number 0) has 2054 sequences 550s Rank 0 is fetching file SampleDirectory/s_6.first1000_2.fastq with lazy loading (please wait...) 550s Rank 0: File SampleDirectory/s_6.first1000_2.fastq (Number 1) has 2054 sequences 550s Rank 0 wrote test2/NumberOfSequences.txt 550s Rank 0 wrote test2/SequencePartition.txt 550s 550s *** 550s Step: Counting sequences to assemble 550s Date: Wed Mar 27 02:03:36 2024 550s Elapsed time: 0 seconds 550s Since beginning: 0 seconds 550s *** 550s 550s 550s Rank 0 is loading sequence reads 550s Rank 0 : partition is [0;4107], 4108 sequence reads 550s Rank 0 is fetching file SampleDirectory/s_6.first1000_1.fastq with lazy loading (please wait...) 550s Rank 0 has 0 sequence reads 550s Rank 0: assembler memory usage: 120636 KiB 550s Rank 0 is fetching file SampleDirectory/s_6.first1000_2.fastq with lazy loading (please wait...) 550s Rank 0 has 4108 sequence reads (completed) 550s 550s *** 550s Step: Sequence loading 550s Date: Wed Mar 27 02:03:36 2024 550s Elapsed time: 0 seconds 550s Since beginning: 0 seconds 550s *** 550s 550s 550s [BloomFilter] allocated 254696 bytes for table with 2037568 bits 550s Rank 0 created its Bloom filter 551s Rank 0 is counting k-mers in sequence reads [1/4108] 551s Rank 0 is counting k-mers in sequence reads [4108/4108] (completed) 551s Rank 0 : VirtualCommunicator (service provided by BufferedData): 230710 virtual messages generated 462 real messages (0.200251%) 551s 551s 551s *** 551s Step: K-mer counting 551s Date: Wed Mar 27 02:03:37 2024 551s Elapsed time: 1 seconds 551s Since beginning: 1 seconds 551s *** 551s 551s 551s Rank 0 number of set bits in the Bloom filter: [ 7801 / 2037568 ] (0.382858%) 551s Rank 0 destroyed its Bloom filter 551s Rank 0 has 1954 k-mers (completed) 551s [BloomFilter] Rank 0: k-mers sampled -> 1954, k-mers dropped -> 0 (0%), k-mers accepted -> 1954 (100%) 551s Rank 0: assembler memory usage: 117028 KiB 552s 552s 552s Rank 0: the minimum coverage is 3 552s Rank 0: the peak coverage is 3 552s Warning: no peak observed in the k-mer coverage distribution. 552s to deal with the sequencing error rate, try to lower the k-mer length (-k) 552s If you are using RNA-Seq or metagenomic data, then you can ignore this warning. 552s 552s *** 552s Step: Coverage distribution analysis 552s Date: Wed Mar 27 02:03:38 2024 552s Elapsed time: 1 seconds 552s Since beginning: 2 seconds 552s *** 552s 552s 552s 553s Rank 0 is adding edges [1/4108] 553s Rank 0 is adding edges [4108/4108] (completed) 553s Rank 0 : VirtualCommunicator (service provided by BufferedData): 453238 virtual messages generated 1813 real messages (0.400011%) 553s Rank 0 : VirtualCommunicator (service provided by BufferedData): 453238 virtual messages generated 1813 real messages (0.400011%) 553s 553s *** 553s Step: Graph construction 553s Date: Wed Mar 27 02:03:39 2024 553s Elapsed time: 1 seconds 553s Since beginning: 3 seconds 553s *** 553s 553s 553s Rank 0 has 1954 vertices (completed) 553s Rank 0: assembler memory usage: 117028 KiB 554s Rank 0 is purging edges [1/1954] 554s Rank 0 is purging edges [1954/1954] (completed) 554s Rank 0: assembler memory usage: 117556 KiB 554s VirtualProcessor: completed jobs: 1954 554s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 3904 virtual messages generated 11 real messages (0.281762%) 556s Rank 0 wrote test2/degreeDistribution.txt 556s 556s *** 556s Step: Null edge purging 556s Date: Wed Mar 27 02:03:42 2024 556s Elapsed time: 3 seconds 556s Since beginning: 6 seconds 556s *** 556s 556s 556s Rank 0 is selecting optimal read markers [1/4108] 556s Rank 0: assembler memory usage: 117556 KiB 556s Rank 0 is selecting optimal read markers [4108/4108] (completed) 556s Rank 0: peak number of workers: 599, maximum: 32768 556s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 238890 virtual messages generated 609 real messages (0.254929%) 556s Rank 0: assembler memory usage: 125684 KiB 556s Rank 0: Freeing unused assembler memory: 4096 KiB freed 556s Rank 0: assembler memory usage: 125684 KiB 556s 556s *** 556s Step: Selection of optimal read markers 556s Date: Wed Mar 27 02:03:42 2024 556s Elapsed time: 0 seconds 556s Since beginning: 6 seconds 556s *** 556s 556s 556s Rank 0: memory usage for optimal read markers= 4096 KiB 556s Rank 0 is creating seeds [1/1954] 556s Rank 0: assembler memory usage: 125684 KiB 558s Rank 0 has 1 seeds 558s Rank 0 is creating seeds [1954/1954] (completed) 558s Rank 0: peak number of workers: 746, maximum: 32768 558s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13612 virtual messages generated 1720 real messages (12.6359%) 558s Rank 0 runtime statistics for seeding algorithm: 558s Rank 0 Skipped paths because of dead end for head: 0 558s Rank 0 Skipped paths because of dead end for tail: 0 558s Rank 0 Skipped paths because of two dead ends: 0 558s Rank 0 Skipped paths because of bubble weak component: 0 558s Rank 0 Skipped paths because of short length: 1952 558s Rank 0 Skipped paths because of bad ownership: 1 558s Rank 0 Skipped paths because of low coverage: 0 558s Rank 0 Eligible paths: 1 558s Rank 0: assembler memory usage: 125684 KiB 558s Rank 0 has 1 seeds to register. 558s Rank 0 registered 0/1 558s Rank 0 registered 0/1 558s Rank 0 registered its seeds 558s VirtualProcessor: completed jobs: 0 558s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 559s Rank 0 freed 4194304 bytes from the path memory pool (chunks: 1) 569s Rank 0: gossiping generated 0 messages (gossips: 0 ---> 0) 569s Rank 0 merged its seeds: 1 seeds -> 1 seeds 569s 569s *** 569s Step: Detection of assembly seeds 569s Date: Wed Mar 27 02:03:55 2024 569s Elapsed time: 13 seconds 569s Since beginning: 19 seconds 569s *** 569s 569s 569s Rank 0 is calculating library lengths [1/1] 569s Rank 0 detected 1737 library lengths 569s Rank 0 is calculating library lengths [1/1] (completed) 569s Rank 0: peak number of workers: 1, maximum: 32768 569s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 7997 virtual messages generated 7997 real messages (100%) 569s Rank 0: assembler memory usage: 162552 KiB 569s Rank 0 : VirtualCommunicator (service provided by BufferedData): 67 virtual messages generated 1 real messages (1.49254%) 569s 569s Mode= 2 signalAverage= 9 569s CURRENT IS NOISE, 244 569s GOT HIT 212 569s 569s 569s Library # 0 (Automatic) -> average length: 214 and standard deviation: 10 569s 569s *** 569s Step: Estimation of outer distances for paired reads 569s Date: Wed Mar 27 02:03:55 2024 569s Elapsed time: 0 seconds 569s Since beginning: 19 seconds 569s *** 569s 569s 569s Rank 0 starts on seed 0, length is 845, flow 0 [0/1] 569s Rank 0 traversed 1000 nucleotide symbols 569s Rank 0: assembler memory usage: 166648 KiB 569s Rank 0 is extending seeds [1/1] (completed) 569s Rank 0 extended 1 seeds out of 1 (100.00%) 569s Rank 0: assembler memory usage: 158456 KiB 569s Rank 0 starting fusions 569s 569s *** 569s Step: Bidirectional extension of seeds 569s Date: Wed Mar 27 02:03:55 2024 569s Elapsed time: 0 seconds 569s Since beginning: 19 seconds 569s *** 569s 569s 569s Rank 0: starting clear step. cycleNumber= 0 571s Rank 0 adding 0 new fusions 571s Rank 0 cleared, 1 paths 571s Rank 0: starting distribution step 571s Rank 0 is distributing fusions [1/1] 571s Rank 0: assembler memory usage: 158456 KiB 571s Date: Wed Mar 27 02:03:57 2024 571s Rank 0 is distributing fusions [1/1] (completed) 571s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 571s Rank 0: assembler memory usage: 162552 KiB 571s Date: Wed Mar 27 02:03:57 2024 571s Rank 0 tells others to compute fusions. 571s Rank 0 FusionTaskCreator assignNextTask [0/2] 571s Rank 0: assembler memory usage: 162552 KiB 571s Date: Wed Mar 27 02:03:57 2024 571s Rank 0 FusionTaskCreator processWorkerResult [0/2] 571s Rank 0: assembler memory usage: 162552 KiB 571s Date: Wed Mar 27 02:03:57 2024 571s Rank 0 FusionTaskCreator [2/2] 571s Statistics: all paths: 1 eliminated during fusing: 0 571s Rank 0: assembler memory usage: 162552 KiB 571s VirtualProcessor: completed jobs: 2 571s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 10907 virtual messages generated 10907 real messages (100%) 571s Rank 0: starting clear step. cycleNumber= 1 572s Rank 0 adding 0 new fusions 572s Rank 0 cleared, 1 paths 572s Rank 0 is distributing fusions [1/1] 572s Rank 0: assembler memory usage: 162552 KiB 572s Date: Wed Mar 27 02:03:58 2024 572s Rank 0 is distributing fusions [1/1] (completed) 572s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 572s Rank 0: assembler memory usage: 162552 KiB 572s Date: Wed Mar 27 02:03:58 2024 572s Rank 0 JoinerTaskCreator assignNextTask [0/2] 572s Rank 0: assembler memory usage: 162552 KiB 572s Date: Wed Mar 27 02:03:58 2024 572s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 572s Rank 0: assembler memory usage: 162552 KiB 572s Date: Wed Mar 27 02:03:58 2024 572s Rank 0 JoinerTaskCreator [2/2] 572s Statistics: all paths: 1 eliminated during joining: 0 572s Rank 0: assembler memory usage: 162552 KiB 572s Date: Wed Mar 27 02:03:58 2024 572s VirtualProcessor: completed jobs: 2 572s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13817 virtual messages generated 13817 real messages (100%) 574s Rank 0 adding 0 new fusions 574s Rank 0 cleared, 1 paths 574s Rank 0: starting distribution step 574s Rank 0 is distributing fusions [1/1] 574s Rank 0: assembler memory usage: 162552 KiB 574s Date: Wed Mar 27 02:04:00 2024 574s Rank 0 is distributing fusions [1/1] (completed) 574s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 574s Rank 0: assembler memory usage: 162552 KiB 574s Date: Wed Mar 27 02:04:00 2024 574s Rank 0 tells others to compute fusions. 574s Rank 0 FusionTaskCreator assignNextTask [0/2] 574s Rank 0: assembler memory usage: 162552 KiB 574s Date: Wed Mar 27 02:04:00 2024 574s Rank 0 FusionTaskCreator processWorkerResult [0/2] 574s Rank 0: assembler memory usage: 162552 KiB 574s Date: Wed Mar 27 02:04:00 2024 574s Rank 0 FusionTaskCreator [2/2] 574s Statistics: all paths: 1 eliminated during fusing: 0 574s Rank 0: assembler memory usage: 162552 KiB 574s VirtualProcessor: completed jobs: 2 574s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 16727 virtual messages generated 16727 real messages (100%) 574s Rank 0: starting clear step. cycleNumber= 2 575s Rank 0 adding 0 new fusions 575s Rank 0 cleared, 1 paths 575s Rank 0 is distributing fusions [1/1] 575s Rank 0: assembler memory usage: 162552 KiB 575s Date: Wed Mar 27 02:04:01 2024 575s Rank 0 is distributing fusions [1/1] (completed) 575s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 575s Rank 0: assembler memory usage: 162552 KiB 575s Date: Wed Mar 27 02:04:01 2024 575s Rank 0 JoinerTaskCreator assignNextTask [0/2] 575s Rank 0: assembler memory usage: 162552 KiB 575s Date: Wed Mar 27 02:04:01 2024 575s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 575s Rank 0: assembler memory usage: 162552 KiB 575s Date: Wed Mar 27 02:04:01 2024 575s Rank 0 JoinerTaskCreator [2/2] 575s Statistics: all paths: 1 eliminated during joining: 0 575s Rank 0: assembler memory usage: 162552 KiB 575s Date: Wed Mar 27 02:04:01 2024 575s VirtualProcessor: completed jobs: 2 575s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 19637 virtual messages generated 19637 real messages (100%) 576s Rank 0 adding 0 new fusions 576s Rank 0 cleared, 1 paths 576s Rank 0: starting distribution step 576s Rank 0 is distributing fusions [1/1] 576s Rank 0: assembler memory usage: 162552 KiB 576s Date: Wed Mar 27 02:04:02 2024 576s Rank 0 is distributing fusions [1/1] (completed) 576s Rank 0 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 6 real messages (0.618557%) 576s Rank 0: assembler memory usage: 162552 KiB 576s Date: Wed Mar 27 02:04:02 2024 576s Rank 0 cycleNumber= 2 576s 576s *** 576s Step: Merging of redundant paths 576s Date: Wed Mar 27 02:04:02 2024 576s Elapsed time: 7 seconds 576s Since beginning: 26 seconds 576s *** 576s 576s 577s Rank 0 appended 1 elements 577s 577s *** 577s Step: Generation of contigs 577s Date: Wed Mar 27 02:04:02 2024 577s Elapsed time: 0 seconds 577s Since beginning: 26 seconds 577s *** 577s 577s Rank 0 objectName: 0 => peakCoverage: 237 blockSize: 970 577s Rank 0: gathering scaffold links [1/1] [970/970] (completed) 577s Rank 0 ineligibleObjects: 0/970 (0.00%) 577s Rank 0: assembler memory usage: 162552 KiB 577s contig: 0 vertices: 970 averageCoverage: 237 standardDeviation: 115 peakCoverage: 237 repeatCoverage: 474 577s Rank 0 finished gathering scaffold links. 577s Rank 0 will write 1 contig lengths 577s Rank 0 will solve the scaffolding problem. 577s Welcome to GreedySolver v1.0 577s 1 vertices; 0 edges 577s 1 contigs >= 500 577s Edges in solution: 0 577s 577s Conflict statistics: 577s 1 scaffolds, 1 >= 500 577s Total: 1000 nucleotides 577s 577s *** 577s Step: Scaffolding of contigs 577s Date: Wed Mar 27 02:04:03 2024 577s Elapsed time: 1 seconds 577s Since beginning: 27 seconds 577s *** 577s 577s Rank 0 syncing with master 577s 577s *** 577s Step: Counting sequences to search 577s Date: Wed Mar 27 02:04:03 2024 577s Elapsed time: 0 seconds 577s Since beginning: 27 seconds 577s *** 577s 577s 577s Rank 0 will add colors, 0 sequences in 0 files to process 577s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0.00%) 578s 578s *** 578s Step: Graph coloring 578s Date: Wed Mar 27 02:04:04 2024 578s Elapsed time: 1 seconds 578s Since beginning: 28 seconds 578s *** 578s 578s 578s Rank 0: starting SlaveMode= call_RAY_SLAVE_MODE_CONTIG_BIOLOGICAL_ABUNDANCES 578s Rank 0 shares its counts 578s Rank 0 computing contig abundances [1/1] [1/970] 578s Rank 0 computing contig abundances [1/1] [970/970] 578s [IO] Input/output operations for coverage XML objects: 1 / bufferSize: 16777216 bytes 578s 578s *** 578s Step: Counting contig biological abundances 578s Date: Wed Mar 27 02:04:04 2024 578s Elapsed time: 0 seconds 578s Since beginning: 28 seconds 578s *** 578s 578s 578s Rank 0 colored the graph with 0 real colors using 1 virtual colors 578s Rank 0 : VirtualCommunicator (service provided by BufferedData): 3880 virtual messages generated 8 real messages (0.21%) 578s 578s *** 578s Step: Counting sequence biological abundances 578s Date: Wed Mar 27 02:04:04 2024 578s Elapsed time: 0 seconds 578s Since beginning: 28 seconds 578s *** 578s 578s 578s [IO] Input/output operations for sequence XML objects: 0 / bufferSize: 16777216 bytes 578s [IO] Input/output operations for identification TSV objects: 0 / bufferSize: 16777216 bytes 579s Rank 0 has exactly 0 k-mer physical colors for the phylogeny. 579s 579s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 579s Rank 0 is starting taxon syncing across the compute tribe. 579s 579s *** 579s Step: Loading taxons 579s Date: Wed Mar 27 02:04:05 2024 579s Elapsed time: 1 seconds 579s Since beginning: 29 seconds 579s *** 579s 579s Rank 0 synced taxons across the grid with 1 poor slaves. 579s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 579s Rank 0 has 0 taxons after syncing with master 581s 581s 581s *** 581s Step: Loading tree 581s Date: Wed Mar 27 02:04:07 2024 581s Elapsed time: 2 seconds 581s Since beginning: 31 seconds 581s *** 581s 582s Rank 0 has exactly 0 k-mer physical colors related to EMBL CDS objects. 582s 582s Rank 0: counting ontology terms in the graph... 584s Rank 0: 0 have some biological signal 584s Number of dereferenced alternate handles: 0 584s Number of k-mer observations with gene ontology terms: 0 584s Rank 0: synced ontology term profiles with master 584s Rank 0: synchronization is complete! 584s Rank 0: ontology terms with biological signal: 0 584s Populated recursive values... 584s Gene ontology terms without depth information: 0 584s [GeneOntology] maximum depth for GeneOntologyDomain  is 0 584s [GeneOntology] maximum depth for GeneOntologyDomain [GeneOntology] maximum depth for GeneOntologyDomain  is 0 584s 584s *** 584s Step: Processing gene ontologies 584s Date: Wed Mar 27 02:04:09 2024 584s Elapsed time: 2 seconds 584s Since beginning: 33 seconds 584s *** 584s 584s Rank 0: the CorePlugin GenomeNeighbourhood is disabled... 584s [GenomeNeighbourhood] in final list: 0 584s 584s *** 584s Step: Computing neighbourhoods 584s Date: Wed Mar 27 02:04:09 2024 584s Elapsed time: 0 seconds 584s Since beginning: 33 seconds 584s *** 584s 584s Contigs >= 100 nt 584s Number: 1 584s Total length: 1000 584s Average: 1000 584s N50: 1000 584s Median: 1000 584s Largest: 1000 584s Contigs >= 500 nt 584s Number: 1 584s Total length: 1000 584s Average: 1000 584s N50: 1000 584s Median: 1000 584s Largest: 1000 584s Scaffolds >= 100 nt 584s Number: 1 584s Total length: 1000 584s Average: 1000 584s N50: 1000 584s Median: 1000 584s Largest: 1000 584s Scaffolds >= 500 nt 584s Number: 1 584s Total length: 1000 584s Average: 1000 584s N50: 1000 584s Median: 1000 584s Largest: 1000 584s 584s Rank 0 wrote test2/Contigs.fasta 584s Rank 0 wrote test2/Scaffolds.fasta 584s Check for test2/* 584s 584s 584s 584s ************************************************** 584s This program comes with ABSOLUTELY NO WARRANTY. 584s This is free software, and you are welcome to redistribute it 584s under certain conditions; see "LICENSE.txt" for details. 584s ************************************************** 584s 584s Ray Copyright (C) 2010, 2011, 2012, 2013 Sébastien Boisvert 584s Centre de recherche en infectiologie de l'Université Laval 584s Project funded by the Canadian Institutes of Health Research (Doctoral award 200902CGM-204212-172830 to S.B.) 584s http://denovoassembler.sf.net/ 584s 584s References to cite: 584s 584s Sébastien Boisvert, Frédéric Raymond, Élénie Godzaridis, François Laviolette and Jacques Corbeil. 584s Ray Meta: scalable de novo metagenome assembly and profiling. 584s Genome Biology (BioMed Central Ltd). 584s 13:R122, Published: 22 December 2012 584s http://dx.doi.org/doi:10.1186/gb-2012-13-12-r122 584s 584s Sébastien Boisvert, François Laviolette & Jacques Corbeil. 584s Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. 584s Journal of Computational Biology (Mary Ann Liebert, Inc. publishers, New York, U.S.A.). 584s November 2010, Volume 17, Issue 11, Pages 1519-1533. 584s http://dx.doi.org/doi:10.1089/cmb.2009.0238 584s 584s Ray version 2.3.1 584s License for Ray: GNU General Public License version 3 584s RayPlatform version: 2.0.1 584s License for RayPlatform: GNU Lesser General Public License version 3 584s 584s MAXKMERLENGTH: 32 584s Maximum coverage depth stored by CoverageDepth: 4294967295 584s MAXIMUM_MESSAGE_SIZE_IN_BYTES: 4000 bytes 584s FORCE_PACKING = n 584s ASSERT = n 584s HAVE_LIBZ = y 584s HAVE_LIBBZ2 = y 584s PROFILER_COLLECT = n 584s MINIRANKS = y 584s CLOCK_GETTIME = n 584s __linux__ = y 584s _MSC_VER = n 584s __GNUC__ = y 584s RAY_32_BITS = n 584s RAY_64_BITS = y 584s MPI standard version: MPI 3.1 584s MPI library: Open-MPI 4.1.6 584s Compiler: GNU gcc/g++ 13.2.0 584s MPI I/O: n 584s 584s 584s -k (to set the k-mer size) 584s Value: 29 584s 584s 584s Paired library # 0 584s -p (paired-end sequences) 584s Left sequences: SampleDirectory/s_6.first1000_1.fastq 584s Right sequences: SampleDirectory/s_6.first1000_2.fastq 584s Average length: automatic detection 584s Standard deviation: automatic detection 584s 584s Ray command: 584s mpiexec -n 1 Ray \ 584s -k \ 584s 29 \ 584s -desable-recycling \ 584s -p \ 584s SampleDirectory/s_6.first1000_1.fastq \ 584s SampleDirectory/s_6.first1000_2.fastq 584s 584s Rank 0 wrote RayOutput/RayCommand.txt 584s 584s k-mer length: 29 584s Rank 0: assembler memory usage: 41912 KiB 584s Rank 0: assembler memory usage: 107748 KiB 584s Rank 0: Rank= 0 Size= 1 ProcessIdentifier= 2611 584s Rank 0: testing the network, please wait... 584s 584s Rank 0 is testing the network [0/1000] 584s Rank 0 is testing the network [1000/1000] 584s Rank 0: mode round trip latency when requesting a reply for a message of 4000 bytes is 1 microseconds (10^-6 seconds) 584s Rank 0: average round trip latency when requesting a reply for a message of 4000 bytes is 1 microseconds (10^-6 seconds) 584s 584s Rank 0 wrote RayOutput/NetworkTest.txt 584s 584s 584s *** 584s Step: Network testing 584s Date: Wed Mar 27 02:04:10 2024 584s Elapsed time: 0 seconds 584s Since beginning: 0 seconds 584s *** 584s 584s 584s Rank 0 is fetching file SampleDirectory/s_6.first1000_1.fastq with lazy loading (please wait...) 584s Rank 0: File SampleDirectory/s_6.first1000_1.fastq (Number 0) has 2054 sequences 584s Rank 0 is fetching file SampleDirectory/s_6.first1000_2.fastq with lazy loading (please wait...) 584s Rank 0: File SampleDirectory/s_6.first1000_2.fastq (Number 1) has 2054 sequences 584s Rank 0 wrote RayOutput/NumberOfSequences.txt 584s Rank 0 wrote RayOutput/SequencePartition.txt 584s 584s *** 584s Step: Counting sequences to assemble 584s Date: Wed Mar 27 02:04:10 2024 584s Elapsed time: 0 seconds 584s Since beginning: 0 seconds 584s *** 584s 584s 584s Rank 0 is loading sequence reads 584s Rank 0 : partition is [0;4107], 4108 sequence reads 584s Rank 0 is fetching file SampleDirectory/s_6.first1000_1.fastq with lazy loading (please wait...) 584s Rank 0 has 0 sequence reads 584s Rank 0: assembler memory usage: 120636 KiB 584s Rank 0 is fetching file SampleDirectory/s_6.first1000_2.fastq with lazy loading (please wait...) 584s Rank 0 has 4108 sequence reads (completed) 584s 584s *** 584s Step: Sequence loading 584s Date: Wed Mar 27 02:04:10 2024 584s Elapsed time: 0 seconds 584s Since beginning: 0 seconds 584s *** 584s 584s 584s [BloomFilter] allocated 238264 bytes for table with 1906112 bits 584s Rank 0 created its Bloom filter 584s Rank 0 is counting k-mers in sequence reads [1/4108] 584s Rank 0 is counting k-mers in sequence reads [4108/4108] (completed) 584s Rank 0 : VirtualCommunicator (service provided by BufferedData): 238926 virtual messages generated 478 real messages (0.200062%) 584s 584s 584s *** 584s Step: K-mer counting 584s Date: Wed Mar 27 02:04:10 2024 584s Elapsed time: 0 seconds 584s Since beginning: 0 seconds 584s *** 584s 584s 584s Rank 0 number of set bits in the Bloom filter: [ 7820 / 1906112 ] (0.410259%) 584s Rank 0 destroyed its Bloom filter 584s Rank 0 has 1958 k-mers (completed) 584s [BloomFilter] Rank 0: k-mers sampled -> 1958, k-mers dropped -> 0 (0%), k-mers accepted -> 1958 (100%) 584s Rank 0: assembler memory usage: 117012 KiB 585s 585s 585s Rank 0: the minimum coverage is 3 585s Rank 0: the peak coverage is 3 585s Warning: no peak observed in the k-mer coverage distribution. 585s to deal with the sequencing error rate, try to lower the k-mer length (-k) 585s If you are using RNA-Seq or metagenomic data, then you can ignore this warning. 585s 585s *** 585s Step: Coverage distribution analysis 585s Date: Wed Mar 27 02:04:11 2024 585s Elapsed time: 1 seconds 585s Since beginning: 1 seconds 585s *** 585s 585s 585s 586s Rank 0 is adding edges [1/4108] 586s Rank 0 is adding edges [4108/4108] (completed) 586s Rank 0 : VirtualCommunicator (service provided by BufferedData): 469636 virtual messages generated 1879 real messages (0.400097%) 586s Rank 0 : VirtualCommunicator (service provided by BufferedData): 469636 virtual messages generated 1879 real messages (0.400097%) 586s 586s *** 586s Step: Graph construction 586s Date: Wed Mar 27 02:04:12 2024 586s Elapsed time: 1 seconds 586s Since beginning: 2 seconds 586s *** 586s 586s 586s Rank 0 has 1958 vertices (completed) 586s Rank 0: assembler memory usage: 117012 KiB 587s Rank 0 is purging edges [1/1958] 587s Rank 0 is purging edges [1958/1958] (completed) 587s Rank 0: assembler memory usage: 117540 KiB 587s VirtualProcessor: completed jobs: 1958 587s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 3912 virtual messages generated 12 real messages (0.306748%) 589s Rank 0 wrote RayOutput/degreeDistribution.txt 589s 589s *** 589s Step: Null edge purging 589s Date: Wed Mar 27 02:04:15 2024 589s Elapsed time: 3 seconds 589s Since beginning: 5 seconds 589s *** 589s 589s 589s Rank 0 is selecting optimal read markers [1/4108] 589s Rank 0: assembler memory usage: 117540 KiB 589s Rank 0 is selecting optimal read markers [4108/4108] (completed) 589s Rank 0: peak number of workers: 599, maximum: 32768 589s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 247142 virtual messages generated 624 real messages (0.252486%) 589s Rank 0: assembler memory usage: 125760 KiB 589s Rank 0: Freeing unused assembler memory: 4096 KiB freed 589s Rank 0: assembler memory usage: 125760 KiB 589s 589s *** 589s Step: Selection of optimal read markers 589s Date: Wed Mar 27 02:04:15 2024 589s Elapsed time: 0 seconds 589s Since beginning: 5 seconds 589s *** 589s 589s 589s Rank 0: memory usage for optimal read markers= 4096 KiB 589s Rank 0 is creating seeds [1/1958] 589s Rank 0: assembler memory usage: 125760 KiB 591s Rank 0 has 1 seeds 591s Rank 0 is creating seeds [1958/1958] (completed) 591s Rank 0: peak number of workers: 746, maximum: 32768 591s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13640 virtual messages generated 1708 real messages (12.522%) 591s Rank 0 runtime statistics for seeding algorithm: 591s Rank 0 Skipped paths because of dead end for head: 0 591s Rank 0 Skipped paths because of dead end for tail: 0 591s Rank 0 Skipped paths because of two dead ends: 0 591s Rank 0 Skipped paths because of bubble weak component: 0 591s Rank 0 Skipped paths because of short length: 1956 591s Rank 0 Skipped paths because of bad ownership: 1 591s Rank 0 Skipped paths because of low coverage: 0 591s Rank 0 Eligible paths: 1 591s Rank 0: assembler memory usage: 125760 KiB 591s Rank 0 has 1 seeds to register. 591s Rank 0 registered 0/1 591s Rank 0 registered 0/1 591s Rank 0 registered its seeds 591s VirtualProcessor: completed jobs: 0 591s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 592s Rank 0 freed 4194304 bytes from the path memory pool (chunks: 1) 602s Rank 0: gossiping generated 0 messages (gossips: 0 ---> 0) 602s Rank 0 merged its seeds: 1 seeds -> 1 seeds 602s 602s *** 602s Step: Detection of assembly seeds 602s Date: Wed Mar 27 02:04:28 2024 602s Elapsed time: 13 seconds 602s Since beginning: 18 seconds 602s *** 602s 602s 602s Rank 0 is calculating library lengths [1/1] 602s Rank 0 detected 1743 library lengths 602s Rank 0 is calculating library lengths [1/1] (completed) 602s Rank 0: peak number of workers: 1, maximum: 32768 602s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 8005 virtual messages generated 8005 real messages (100%) 602s Rank 0: assembler memory usage: 162628 KiB 602s Rank 0 : VirtualCommunicator (service provided by BufferedData): 67 virtual messages generated 1 real messages (1.49254%) 602s 602s Mode= 2 signalAverage= 10 602s CURRENT IS NOISE, 244 602s GOT HIT 214 602s 602s 602s Library # 0 (Automatic) -> average length: 214 and standard deviation: 10 602s 602s *** 602s Step: Estimation of outer distances for paired reads 602s Date: Wed Mar 27 02:04:28 2024 602s Elapsed time: 0 seconds 602s Since beginning: 18 seconds 602s *** 602s 602s 603s Rank 0 starts on seed 0, length is 845, flow 0 [0/1] 603s Rank 0 traversed 1000 nucleotide symbols 603s Rank 0: assembler memory usage: 166724 KiB 603s Rank 0 is extending seeds [1/1] (completed) 603s Rank 0 extended 1 seeds out of 1 (100.00%) 603s Rank 0: assembler memory usage: 158532 KiB 603s Rank 0 starting fusions 603s 603s *** 603s Step: Bidirectional extension of seeds 603s Date: Wed Mar 27 02:04:29 2024 603s Elapsed time: 1 seconds 603s Since beginning: 19 seconds 603s *** 603s 603s 603s Rank 0: starting clear step. cycleNumber= 0 604s Rank 0 adding 0 new fusions 604s Rank 0 cleared, 1 paths 604s Rank 0: starting distribution step 604s Rank 0 is distributing fusions [1/1] 604s Rank 0: assembler memory usage: 158532 KiB 604s Date: Wed Mar 27 02:04:30 2024 604s Rank 0 is distributing fusions [1/1] (completed) 604s Rank 0 : VirtualCommunicator (service provided by BufferedData): 972 virtual messages generated 6 real messages (0.617284%) 604s Rank 0: assembler memory usage: 162628 KiB 604s Date: Wed Mar 27 02:04:30 2024 604s Rank 0 tells others to compute fusions. 604s Rank 0 FusionTaskCreator assignNextTask [0/2] 604s Rank 0: assembler memory usage: 162628 KiB 604s Date: Wed Mar 27 02:04:30 2024 604s Rank 0 FusionTaskCreator processWorkerResult [0/2] 604s Rank 0: assembler memory usage: 162628 KiB 604s Date: Wed Mar 27 02:04:30 2024 604s Rank 0 FusionTaskCreator [2/2] 604s Statistics: all paths: 1 eliminated during fusing: 0 604s Rank 0: assembler memory usage: 162628 KiB 604s VirtualProcessor: completed jobs: 2 604s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 10921 virtual messages generated 10921 real messages (100%) 604s Rank 0: starting clear step. cycleNumber= 1 605s Rank 0 adding 0 new fusions 605s Rank 0 cleared, 1 paths 605s Rank 0 is distributing fusions [1/1] 605s Rank 0: assembler memory usage: 162628 KiB 605s Date: Wed Mar 27 02:04:31 2024 605s Rank 0 is distributing fusions [1/1] (completed) 605s Rank 0 : VirtualCommunicator (service provided by BufferedData): 972 virtual messages generated 6 real messages (0.617284%) 605s Rank 0: assembler memory usage: 162628 KiB 605s Date: Wed Mar 27 02:04:31 2024 605s Rank 0 JoinerTaskCreator assignNextTask [0/2] 605s Rank 0: assembler memory usage: 162628 KiB 605s Date: Wed Mar 27 02:04:31 2024 605s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 605s Rank 0: assembler memory usage: 162628 KiB 605s Date: Wed Mar 27 02:04:31 2024 605s Rank 0 JoinerTaskCreator [2/2] 605s Statistics: all paths: 1 eliminated during joining: 0 605s Rank 0: assembler memory usage: 162628 KiB 605s Date: Wed Mar 27 02:04:31 2024 605s VirtualProcessor: completed jobs: 2 605s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 13837 virtual messages generated 13837 real messages (100%) 607s Rank 0 adding 0 new fusions 607s Rank 0 cleared, 1 paths 607s Rank 0: starting distribution step 607s Rank 0 is distributing fusions [1/1] 607s Rank 0: assembler memory usage: 162628 KiB 607s Date: Wed Mar 27 02:04:33 2024 607s Rank 0 is distributing fusions [1/1] (completed) 607s Rank 0 : VirtualCommunicator (service provided by BufferedData): 972 virtual messages generated 6 real messages (0.617284%) 607s Rank 0: assembler memory usage: 162628 KiB 607s Date: Wed Mar 27 02:04:33 2024 607s Rank 0 tells others to compute fusions. 607s Rank 0 FusionTaskCreator assignNextTask [0/2] 607s Rank 0: assembler memory usage: 162628 KiB 607s Date: Wed Mar 27 02:04:33 2024 607s Rank 0 FusionTaskCreator processWorkerResult [0/2] 607s Rank 0: assembler memory usage: 162628 KiB 607s Date: Wed Mar 27 02:04:33 2024 607s Rank 0 FusionTaskCreator [2/2] 607s Statistics: all paths: 1 eliminated during fusing: 0 607s Rank 0: assembler memory usage: 162628 KiB 607s VirtualProcessor: completed jobs: 2 607s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 16753 virtual messages generated 16753 real messages (100%) 607s Rank 0: starting clear step. cycleNumber= 2 608s Rank 0 adding 0 new fusions 608s Rank 0 cleared, 1 paths 608s Rank 0 is distributing fusions [1/1] 608s Rank 0: assembler memory usage: 162628 KiB 608s Date: Wed Mar 27 02:04:34 2024 608s Rank 0 is distributing fusions [1/1] (completed) 608s Rank 0 : VirtualCommunicator (service provided by BufferedData): 972 virtual messages generated 6 real messages (0.617284%) 608s Rank 0: assembler memory usage: 162628 KiB 608s Date: Wed Mar 27 02:04:34 2024 608s Rank 0 JoinerTaskCreator assignNextTask [0/2] 608s Rank 0: assembler memory usage: 162628 KiB 608s Date: Wed Mar 27 02:04:34 2024 608s Rank 0 JoinerTaskCreator processWorkerResult [0/2] 608s Rank 0: assembler memory usage: 162628 KiB 608s Date: Wed Mar 27 02:04:34 2024 608s Rank 0 JoinerTaskCreator [2/2] 608s Statistics: all paths: 1 eliminated during joining: 0 608s Rank 0: assembler memory usage: 162628 KiB 608s Date: Wed Mar 27 02:04:34 2024 608s VirtualProcessor: completed jobs: 2 608s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 19669 virtual messages generated 19669 real messages (100%) 610s Rank 0 adding 0 new fusions 610s Rank 0 cleared, 1 paths 610s Rank 0: starting distribution step 610s Rank 0 is distributing fusions [1/1] 610s Rank 0: assembler memory usage: 162628 KiB 610s Date: Wed Mar 27 02:04:36 2024 610s Rank 0 is distributing fusions [1/1] (completed) 610s Rank 0 : VirtualCommunicator (service provided by BufferedData): 972 virtual messages generated 6 real messages (0.617284%) 610s Rank 0: assembler memory usage: 162628 KiB 610s Date: Wed Mar 27 02:04:36 2024 610s Rank 0 cycleNumber= 2 610s 610s *** 610s Step: Merging of redundant paths 610s Date: Wed Mar 27 02:04:36 2024 610s Elapsed time: 7 seconds 610s Since beginning: 26 seconds 610s *** 610s 610s 610s Rank 0 appended 1 elements 610s 610s *** 610s Step: Generation of contigs 610s Date: Wed Mar 27 02:04:36 2024 610s Elapsed time: 0 seconds 610s Since beginning: 26 seconds 610s *** 610s 610s Rank 0 objectName: 0 => peakCoverage: 245 blockSize: 972 610s Rank 0: gathering scaffold links [1/1] [972/972] (completed) 610s Rank 0 ineligibleObjects: 0/972 (0.00%) 610s Rank 0: assembler memory usage: 162628 KiB 610s contig: 0 vertices: 972 averageCoverage: 245 standardDeviation: 117 peakCoverage: 245 repeatCoverage: 490 610s Rank 0 finished gathering scaffold links. 610s Rank 0 will write 1 contig lengths 610s Rank 0 will solve the scaffolding problem. 610s Welcome to GreedySolver v1.0 610s 1 vertices; 0 edges 610s 1 contigs >= 500 610s Edges in solution: 0 610s 610s Conflict statistics: 610s 1 scaffolds, 1 >= 500 610s Total: 1000 nucleotides 610s 610s *** 610s Step: Scaffolding of contigs 610s Date: Wed Mar 27 02:04:36 2024 610s Elapsed time: 0 seconds 610s Since beginning: 26 seconds 610s *** 610s 610s Rank 0 syncing with master 610s 610s *** 610s Step: Counting sequences to search 610s Date: Wed Mar 27 02:04:36 2024 610s Elapsed time: 0 seconds 610s Since beginning: 26 seconds 610s *** 610s 610s 610s Rank 0 will add colors, 0 sequences in 0 files to process 610s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0.00%) 611s 611s *** 611s Step: Graph coloring 611s Date: Wed Mar 27 02:04:37 2024 611s Elapsed time: 1 seconds 611s Since beginning: 27 seconds 611s *** 611s 611s 611s Rank 0: starting SlaveMode= call_RAY_SLAVE_MODE_CONTIG_BIOLOGICAL_ABUNDANCES 611s Rank 0 shares its counts 611s Rank 0 computing contig abundances [1/1] [1/972] 611s Rank 0 computing contig abundances [1/1] [972/972] 611s [IO] Input/output operations for coverage XML objects: 1 / bufferSize: 16777216 bytes 611s 611s *** 611s Step: Counting contig biological abundances 611s Date: Wed Mar 27 02:04:37 2024 611s Elapsed time: 0 seconds 611s Since beginning: 27 seconds 611s *** 611s 611s 611s Rank 0 colored the graph with 0 real colors using 1 virtual colors 611s Rank 0 : VirtualCommunicator (service provided by BufferedData): 3888 virtual messages generated 8 real messages (0.21%) 611s 611s *** 611s Step: Counting sequence biological abundances 611s Date: Wed Mar 27 02:04:37 2024 611s Elapsed time: 0 seconds 611s Since beginning: 27 seconds 611s *** 611s 611s 611s [IO] Input/output operations for sequence XML objects: 0 / bufferSize: 16777216 bytes 611s [IO] Input/output operations for identification TSV objects: 0 / bufferSize: 16777216 bytes 613s Rank 0 has exactly 0 k-mer physical colors for the phylogeny. 613s 613s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 613s Rank 0 is starting taxon syncing across the compute tribe. 613s 613s *** 613s Step: Loading taxons 613s Date: Wed Mar 27 02:04:39 2024 613s Elapsed time: 2 seconds 613s Since beginning: 29 seconds 613s *** 613s 613s Rank 0 synced taxons across the grid with 1 poor slaves. 613s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 613s Rank 0 has 0 taxons after syncing with master 614s 614s 614s *** 614s Step: Loading tree 614s Date: Wed Mar 27 02:04:40 2024 614s Elapsed time: 1 seconds 614s Since beginning: 30 seconds 614s *** 614s 616s Rank 0 has exactly 0 k-mer physical colors related to EMBL CDS objects. 616s 616s Rank 0: counting ontology terms in the graph... 617s Rank 0: 0 have some biological signal 617s Number of dereferenced alternate handles: 0 617s Number of k-mer observations with gene ontology terms: 0 617s Rank 0: synced ontology term profiles with master 617s Rank 0: synchronization is complete! 617s Rank 0: ontology terms with biological signal: 0 617s Populated recursive values... 617s Gene ontology terms without depth information: 0 617s [GeneOntology] maximum depth for GeneOntologyDomain  is 0 617s [GeneOntology] maximum depth for GeneOntologyDomain [GeneOntology] maximum depth for GeneOntologyDomain  is 0 617s 617s *** 617s Step: Processing gene ontologies 617s Date: Wed Mar 27 02:04:43 2024 617s Elapsed time: 3 seconds 617s Since beginning: 33 seconds 617s *** 617s 617s Rank 0: the CorePlugin GenomeNeighbourhood is disabled... 617s [GenomeNeighbourhood] in final list: 0 617s 617s *** 617s Step: Computing neighbourhoods 617s Date: Wed Mar 27 02:04:43 2024 617s Elapsed time: 0 seconds 617s Since beginning: 33 seconds 617s *** 617s 617s Contigs >= 100 nt 617s Number: 1 617s Total length: 1000 617s Average: 1000 617s N50: 1000 617s Median: 1000 617s Largest: 1000 617s Contigs >= 500 nt 617s Number: 1 617s Total length: 1000 617s Average: 1000 617s N50: 1000 617s Median: 1000 617s Largest: 1000 617s Scaffolds >= 100 nt 617s Number: 1 617s Total length: 1000 617s Average: 1000 617s N50: 1000 617s Median: 1000 617s Largest: 1000 617s Scaffolds >= 500 nt 617s Number: 1 617s Total length: 1000 617s Average: 1000 617s N50: 1000 617s Median: 1000 617s Largest: 1000 617s 617s Rank 0 wrote RayOutput/Contigs.fasta 617s Rank 0 wrote RayOutput/Scaffolds.fasta 617s Check for RayOutput/* 617s 617s 617s 617s ************************************************** 617s This program comes with ABSOLUTELY NO WARRANTY. 617s This is free software, and you are welcome to redistribute it 617s under certain conditions; see "LICENSE.txt" for details. 617s ************************************************** 617s 617s Ray Copyright (C) 2010, 2011, 2012, 2013 Sébastien Boisvert 617s Centre de recherche en infectiologie de l'Université Laval 617s Project funded by the Canadian Institutes of Health Research (Doctoral award 200902CGM-204212-172830 to S.B.) 617s http://denovoassembler.sf.net/ 617s 617s References to cite: 617s 617s Sébastien Boisvert, Frédéric Raymond, Élénie Godzaridis, François Laviolette and Jacques Corbeil. 617s Ray Meta: scalable de novo metagenome assembly and profiling. 617s Genome Biology (BioMed Central Ltd). 617s 13:R122, Published: 22 December 2012 617s http://dx.doi.org/doi:10.1186/gb-2012-13-12-r122 617s 617s Sébastien Boisvert, François Laviolette & Jacques Corbeil. 617s Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies. 617s Journal of Computational Biology (Mary Ann Liebert, Inc. publishers, New York, U.S.A.). 617s November 2010, Volume 17, Issue 11, Pages 1519-1533. 617s http://dx.doi.org/doi:10.1089/cmb.2009.0238 617s 617s Ray version 2.3.1 617s License for Ray: GNU General Public License version 3 617s RayPlatform version: 2.0.1 617s License for RayPlatform: GNU Lesser General Public License version 3 617s 617s MAXKMERLENGTH: 32 617s Maximum coverage depth stored by CoverageDepth: 4294967295 617s MAXIMUM_MESSAGE_SIZE_IN_BYTES: 4000 bytes 617s FORCE_PACKING = n 617s ASSERT = n 617s HAVE_LIBZ = y 617s HAVE_LIBBZ2 = y 617s PROFILER_COLLECT = n 617s MINIRANKS = y 617s CLOCK_GETTIME = n 617s __linux__ = y 617s _MSC_VER = n 617s __GNUC__ = y 617s RAY_32_BITS = n 617s RAY_64_BITS = y 617s MPI standard version: MPI 3.1 617s MPI library: Open-MPI 4.1.6 617s Compiler: GNU gcc/g++ 13.2.0 617s MPI I/O: n 617s 617s 617s -k (to set the k-mer size) 617s Value: 31 617s 617s 617s Paired library # 0 617s -p (paired-end sequences) 617s Left sequences: ecoli_1K_1.fq 617s Right sequences: ecoli_1K_2.fq 617s Average length: automatic detection 617s Standard deviation: automatic detection 617s 617s Ray command: 617s mpiexec -n 2 Ray \ 617s -k \ 617s 31 \ 617s -p \ 617s ecoli_1K_1.fq \ 617s ecoli_1K_2.fq \ 617s -o \ 617s test3 617s 617s Rank 0 wrote test3/RayCommand.txt 617s 617s k-mer length: 31 617s Rank 1: assembler memory usage: 41920 KiB 617s Rank 0: assembler memory usage: 41920 KiB 617s Rank 0: assembler memory usage: 107776 KiB 617s Rank 0: Rank= 0 Size= 2 ProcessIdentifier= 2620 617s Rank 0: testing the network, please wait... 617s 617s Rank 1: assembler memory usage: 107768 KiB 617s Rank 1: Rank= 1 Size= 2 ProcessIdentifier= 2622 617s Rank 1 is testing the network [0/1000] 617s Rank 0 is testing the network [0/1000] 617s Rank 1 is testing the network [1000/1000] 617s Rank 1: mode round trip latency when requesting a reply for a message of 4000 bytes is 3 microseconds (10^-6 seconds) 617s Rank 1: average round trip latency when requesting a reply for a message of 4000 bytes is 15 microseconds (10^-6 seconds) 617s Rank 0 is testing the network [1000/1000] 617s Rank 0: mode round trip latency when requesting a reply for a message of 4000 bytes is 3 microseconds (10^-6 seconds) 617s Rank 0: average round trip latency when requesting a reply for a message of 4000 bytes is 16 microseconds (10^-6 seconds) 617s 617s Rank 0 wrote test3/NetworkTest.txt 617s 617s 617s *** 617s Step: Network testing 617s Date: Wed Mar 27 02:04:43 2024 617s Elapsed time: 0 seconds 617s Since beginning: 0 seconds 617s *** 617s 617s 617s Rank 1 is fetching file ecoli_1K_2.fq with lazy loading (please wait...) 617s Rank 0 is fetching file ecoli_1K_1.fq with lazy loading (please wait...) 617s Rank 0: File ecoli_1K_1.fq (Number 0) has 2054 sequences 617s Rank 1: File ecoli_1K_2.fq (Number 1) has 2054 sequences 617s Rank 0 wrote test3/NumberOfSequences.txt 617s Rank 0 wrote test3/SequencePartition.txt 617s 617s *** 617s Step: Counting sequences to assemble 617s Date: Wed Mar 27 02:04:43 2024 617s Elapsed time: 0 seconds 617s Since beginning: 0 seconds 617s *** 617s 617s 617s Rank 0 is loading sequence reads 617s Rank 1 is loading sequence reads 617s Rank 1 : partition is [2054;4107], 2054 sequence reads 617s Rank 0 : partition is [0;2053], 2054 sequence reads 617s Rank 1 is fetching file ecoli_1K_2.fq with lazy loading (please wait...) 617s Rank 0 is fetching file ecoli_1K_1.fq with lazy loading (please wait...) 617s Rank 0 has 0 sequence reads 617s Rank 1 has 0 sequence reads 617s Rank 1: assembler memory usage: 116560 KiB 617s Rank 0: assembler memory usage: 116568 KiB 617s Rank 0 has 2054 sequence reads (completed) 617s Rank 1 has 2054 sequence reads (completed) 617s 617s *** 617s Step: Sequence loading 617s Date: Wed Mar 27 02:04:43 2024 617s Elapsed time: 0 seconds 617s Since beginning: 0 seconds 617s *** 617s 617s 617s [BloomFilter] allocated 127352 bytes for table with 1018784 bits 617s [BloomFilter] allocated 127352 bytes for table with 1018784 bits 617s Rank 0 created its Bloom filter 617s Rank 1 created its Bloom filter 617s Rank 1 is counting k-mers in sequence reads [1/2054] 617s Rank 0 is counting k-mers in sequence reads [1/2054] 618s Rank 1 is counting k-mers in sequence reads [2054/2054] (completed) 618s Rank 1 : VirtualCommunicator (service provided by BufferedData): 114119 virtual messages generated 229 real messages (0.200668%) 618s Rank 0 is counting k-mers in sequence reads [2054/2054] (completed) 618s Rank 0 : VirtualCommunicator (service provided by BufferedData): 116591 virtual messages generated 234 real messages (0.200702%) 618s 618s 618s *** 618s Step: K-mer counting 618s Date: Wed Mar 27 02:04:44 2024 618s Elapsed time: 1 seconds 618s Since beginning: 1 seconds 618s *** 618s 618s 618s Rank 0 number of set bits in the Bloom filter: [ 4119 / 1018784 ] (0.404306%) 618s Rank 1 number of set bits in the Bloom filter: [ 3683 / 1018784 ] (0.361509%) 618s Rank 1 destroyed its Bloom filter 618s Rank 1 has 922 k-mers (completed) 618s [BloomFilter] Rank 1: k-mers sampled -> 922, k-mers dropped -> 0 (0%), k-mers accepted -> 922 (100%) 618s Rank 1: assembler memory usage: 112828 KiB 618s Rank 0 destroyed its Bloom filter 618s Rank 0 has 1032 k-mers (completed) 618s [BloomFilter] Rank 0: k-mers sampled -> 1032, k-mers dropped -> 0 (0%), k-mers accepted -> 1032 (100%) 618s Rank 0: assembler memory usage: 112836 KiB 621s 621s 621s Rank 0: the minimum coverage is 3 621s Rank 0: the peak coverage is 3 621s Warning: no peak observed in the k-mer coverage distribution. 621s to deal with the sequencing error rate, try to lower the k-mer length (-k) 621s If you are using RNA-Seq or metagenomic data, then you can ignore this warning. 621s 621s *** 621s Step: Coverage distribution analysis 621s Date: Wed Mar 27 02:04:47 2024 621s Elapsed time: 3 seconds 621s Since beginning: 4 seconds 621s *** 621s 621s 621s 621s Rank 0 is adding edges [1/2054] 621s Rank 1 is adding edges [1/2054] 622s Rank 1 is adding edges [2054/2054] (completed) 622s Rank 1 : VirtualCommunicator (service provided by BufferedData): 224144 virtual messages generated 897 real messages (0.400189%) 622s Rank 1 : VirtualCommunicator (service provided by BufferedData): 224144 virtual messages generated 897 real messages (0.400189%) 622s Rank 0 is adding edges [2054/2054] (completed) 622s Rank 0 : VirtualCommunicator (service provided by BufferedData): 229094 virtual messages generated 917 real messages (0.400272%) 622s Rank 0 : VirtualCommunicator (service provided by BufferedData): 229094 virtual messages generated 917 real messages (0.400272%) 622s 622s *** 622s Step: Graph construction 622s Date: Wed Mar 27 02:04:48 2024 622s Elapsed time: 1 seconds 622s Since beginning: 5 seconds 622s *** 622s 622s 622s Rank 1 has 922 vertices (completed) 622s Rank 0 has 1032 vertices (completed) 622s Rank 0: assembler memory usage: 112836 KiB 622s Rank 1: assembler memory usage: 112828 KiB 624s Rank 1 is purging edges [1/922] 624s Rank 1 is purging edges [922/922] (completed) 624s Rank 1: assembler memory usage: 112960 KiB 624s VirtualProcessor: completed jobs: 922 624s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 1842 virtual messages generated 11 real messages (0.597177%) 624s Rank 0 is purging edges [1/1032] 624s Rank 0 is purging edges [1032/1032] (completed) 624s Rank 0: assembler memory usage: 113108 KiB 624s VirtualProcessor: completed jobs: 1032 624s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 2062 virtual messages generated 9 real messages (0.436469%) 627s Rank 0 wrote test3/degreeDistribution.txt 627s 627s *** 627s Step: Null edge purging 627s Date: Wed Mar 27 02:04:53 2024 627s Elapsed time: 5 seconds 627s Since beginning: 10 seconds 627s *** 627s 627s 627s Rank 1 is selecting optimal read markers [1/2054] 627s Rank 0 is selecting optimal read markers [1/2054] 627s Rank 0: assembler memory usage: 113108 KiB 627s Rank 1: assembler memory usage: 112960 KiB 629s Rank 0 is selecting optimal read markers [2054/2054] (completed) 629s Rank 0: peak number of workers: 1135, maximum: 32768 629s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 120679 virtual messages generated 369 real messages (0.30577%) 629s Rank 0: assembler memory usage: 121320 KiB 629s Rank 0: Freeing unused assembler memory: 4096 KiB freed 629s Rank 0: assembler memory usage: 121320 KiB 629s Rank 1 is selecting optimal read markers [2054/2054] (completed) 629s Rank 1: peak number of workers: 1121, maximum: 32768 629s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 118211 virtual messages generated 360 real messages (0.30454%) 629s Rank 1: assembler memory usage: 121272 KiB 629s Rank 1: Freeing unused assembler memory: 4096 KiB freed 629s Rank 1: assembler memory usage: 121272 KiB 629s 629s *** 629s Step: Selection of optimal read markers 629s Date: Wed Mar 27 02:04:55 2024 629s Elapsed time: 2 seconds 629s Since beginning: 12 seconds 629s *** 629s 629s 629s Rank 1: memory usage for optimal read markers= 4096 KiB 629s Rank 0: memory usage for optimal read markers= 4096 KiB 629s Rank 0 is creating seeds [1/1032] 629s Rank 1 is creating seeds [1/922] 629s Rank 1: assembler memory usage: 121272 KiB 629s Rank 0: assembler memory usage: 121320 KiB 632s Rank 1 has 1 seeds 632s Rank 1 is creating seeds [922/922] (completed) 632s Rank 1: peak number of workers: 916, maximum: 32768 632s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 6519 virtual messages generated 1755 real messages (26.9213%) 632s Rank 1 runtime statistics for seeding algorithm: 632s Rank 1 Skipped paths because of dead end for head: 0 632s Rank 1 Skipped paths because of dead end for tail: 0 632s Rank 1 Skipped paths because of two dead ends: 0 632s Rank 1 Skipped paths because of bubble weak component: 0 632s Rank 1 Skipped paths because of short length: 921 632s Rank 1 Skipped paths because of bad ownership: 0 632s Rank 1 Skipped paths because of low coverage: 0 632s Rank 1 Eligible paths: 1 632s Rank 1: assembler memory usage: 121272 KiB 632s Rank 0 has 0 seeds 632s Rank 0 is creating seeds [1032/1032] (completed) 632s Rank 0: peak number of workers: 998, maximum: 32768 632s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 7093 virtual messages generated 1744 real messages (24.5876%) 632s Rank 0 runtime statistics for seeding algorithm: 632s Rank 0 Skipped paths because of dead end for head: 0 632s Rank 0 Skipped paths because of dead end for tail: 0 632s Rank 0 Skipped paths because of two dead ends: 0 632s Rank 0 Skipped paths because of bubble weak component: 0 632s Rank 0 Skipped paths because of short length: 1031 632s Rank 0 Skipped paths because of bad ownership: 1 632s Rank 0 Skipped paths because of low coverage: 0 632s Rank 0 Eligible paths: 0 632s Rank 0: assembler memory usage: 121320 KiB 632s Rank 0 registered -1/0 632s Rank 1 has 1 seeds to register. 632s Rank 0 registered its seeds 632s Rank 1 registered 0/1 632s Rank 1 registered 0/1 632s Rank 1 registered its seeds 632s VirtualProcessor: completed jobs: 0 632s VirtualProcessor: completed jobs: 0 632s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 632s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 635s Rank 1 freed 4194304 bytes from the path memory pool (chunks: 1) 635s Rank 0 freed 4194304 bytes from the path memory pool (chunks: 1) 645s Rank 1: gossiping generated 0 messages (gossips: 0 ---> 0) 645s Rank 0: gossiping generated 0 messages (gossips: 0 ---> 0) 645s Rank 0 merged its seeds: 0 seeds -> 0 seeds 645s Rank 1 merged its seeds: 1 seeds -> 1 seeds 645s 645s *** 645s Step: Detection of assembly seeds 645s Date: Wed Mar 27 02:05:11 2024 645s Elapsed time: 16 seconds 645s Since beginning: 28 seconds 645s *** 645s 645s 645s Rank 0 detected 0 library lengths 645s Rank 0 is calculating library lengths [0/0] (completed) 645s Rank 0: peak number of workers: 0, maximum: 32768 645s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 645s Rank 0: assembler memory usage: 125416 KiB 645s Rank 1 is calculating library lengths [1/1] 645s Rank 1 detected 1737 library lengths 645s Rank 1 is calculating library lengths [1/1] (completed) 645s Rank 1: peak number of workers: 1, maximum: 32768 645s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 7990 virtual messages generated 7990 real messages (100%) 645s Rank 1: assembler memory usage: 158140 KiB 645s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 645s Rank 1 : VirtualCommunicator (service provided by BufferedData): 67 virtual messages generated 1 real messages (1.49254%) 645s 645s Mode= 2 signalAverage= 9 645s CURRENT IS NOISE, 244 645s GOT HIT 212 645s 645s 645s Library # 0 (Automatic) -> average length: 214 and standard deviation: 10 645s 645s *** 645s Step: Estimation of outer distances for paired reads 645s Date: Wed Mar 27 02:05:11 2024 645s Elapsed time: 0 seconds 645s Since beginning: 28 seconds 645s *** 645s 645s 645s Rank 0 is extending seeds [0/0] (completed) 645s Rank 0 extended 0 seeds out of 0 (0.00%) 645s Rank 0: assembler memory usage: 125416 KiB 645s Rank 1 starts on seed 0, length is 845, flow 0 [0/1] 650s Rank 1 traversed 1000 nucleotide symbols 650s Rank 1: assembler memory usage: 162236 KiB 650s Rank 1 is extending seeds [1/1] (completed) 650s Rank 1 extended 1 seeds out of 1 (100.00%) 650s Rank 1: assembler memory usage: 154044 KiB 650s Rank 0 starting fusions 650s 650s *** 650s Step: Bidirectional extension of seeds 650s Date: Wed Mar 27 02:05:16 2024 650s Elapsed time: 5 seconds 650s Since beginning: 33 seconds 650s *** 650s 650s 650s Rank 0: starting clear step. cycleNumber= 0 653s Rank 1 adding 0 new fusions 653s Rank 1 cleared, 1 paths 653s Rank 0 adding 0 new fusions 653s Rank 0 cleared, 0 paths 653s Rank 0: starting distribution step 653s Rank 0 is distributing fusions [0/0] (completed) 653s Rank 1 is distributing fusions [1/1] 653s Rank 1: assembler memory usage: 154044 KiB 653s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 653s Rank 0: assembler memory usage: 125416 KiB 653s Date: Wed Mar 27 02:05:19 2024 653s Date: Wed Mar 27 02:05:19 2024 653s Rank 1 is distributing fusions [1/1] (completed) 653s Rank 1 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 7 real messages (0.721649%) 653s Rank 1: assembler memory usage: 158140 KiB 653s Date: Wed Mar 27 02:05:19 2024 653s Rank 0 tells others to compute fusions. 653s Rank 0 FusionTaskCreator [0/0] 653s Rank 1 FusionTaskCreator assignNextTask [0/2] 653s Rank 1: assembler memory usage: 158140 KiB 653s Statistics: all paths: 0 eliminated during fusing: 0 653s Rank 0: assembler memory usage: 125416 KiB 653s Date: Wed Mar 27 02:05:19 2024 653s VirtualProcessor: completed jobs: 0 653s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 653s Rank 1 FusionTaskCreator processWorkerResult [0/2] 653s Rank 1: assembler memory usage: 158140 KiB 653s Date: Wed Mar 27 02:05:19 2024 653s Rank 1 FusionTaskCreator [2/2] 653s Statistics: all paths: 1 eliminated during fusing: 0 653s Rank 1: assembler memory usage: 158140 KiB 653s VirtualProcessor: completed jobs: 2 653s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 10900 virtual messages generated 10900 real messages (100%) 653s Rank 0: starting clear step. cycleNumber= 1 656s Rank 1 adding 0 new fusions 656s Rank 1 cleared, 1 paths 656s Rank 0 adding 0 new fusions 656s Rank 0 cleared, 0 paths 656s Rank 0 is distributing fusions [0/0] (completed) 656s Rank 1 is distributing fusions [1/1] 656s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 656s Rank 1: assembler memory usage: 158140 KiB 656s Rank 0: assembler memory usage: 125416 KiB 656s Date: Wed Mar 27 02:05:22 2024 656s Date: Wed Mar 27 02:05:22 2024 656s Rank 1 is distributing fusions [1/1] (completed) 656s Rank 1 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 7 real messages (0.721649%) 656s Rank 1: assembler memory usage: 158140 KiB 656s Date: Wed Mar 27 02:05:22 2024 656s Rank 0 JoinerTaskCreator [0/0] 656s Rank 1 JoinerTaskCreator assignNextTask [0/2] 656s Rank 1: assembler memory usage: 158140 KiB 656s Statistics: all paths: 0 eliminated during joining: 0 656s Rank 0: assembler memory usage: 125416 KiB 656s Date: Wed Mar 27 02:05:22 2024 656s Date: Wed Mar 27 02:05:22 2024 656s VirtualProcessor: completed jobs: 0 656s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 656s Rank 1 JoinerTaskCreator processWorkerResult [0/2] 656s Rank 1: assembler memory usage: 158140 KiB 656s Date: Wed Mar 27 02:05:22 2024 656s Rank 1 JoinerTaskCreator [2/2] 656s Statistics: all paths: 1 eliminated during joining: 0 656s Rank 1: assembler memory usage: 158140 KiB 656s Date: Wed Mar 27 02:05:22 2024 656s VirtualProcessor: completed jobs: 2 656s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 13810 virtual messages generated 13810 real messages (100%) 659s Rank 0 adding 0 new fusions 659s Rank 0 cleared, 0 paths 659s Rank 1 adding 0 new fusions 659s Rank 1 cleared, 1 paths 659s Rank 0: starting distribution step 659s Rank 0 is distributing fusions [0/0] (completed) 659s Rank 1 is distributing fusions [1/1] 659s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 659s Rank 1: assembler memory usage: 158140 KiB 659s Rank 0: assembler memory usage: 125416 KiB 659s Date: Wed Mar 27 02:05:25 2024 659s Date: Wed Mar 27 02:05:25 2024 659s Rank 1 is distributing fusions [1/1] (completed) 659s Rank 1 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 7 real messages (0.721649%) 659s Rank 1: assembler memory usage: 158140 KiB 659s Date: Wed Mar 27 02:05:25 2024 659s Rank 0 tells others to compute fusions. 659s Rank 1 FusionTaskCreator assignNextTask [0/2] 659s Rank 0 FusionTaskCreator [0/0] 659s Rank 1: assembler memory usage: 158140 KiB 659s Statistics: all paths: 0 eliminated during fusing: 0 659s Rank 0: assembler memory usage: 125416 KiB 659s Date: Wed Mar 27 02:05:25 2024 659s VirtualProcessor: completed jobs: 0 659s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 659s Rank 1 FusionTaskCreator processWorkerResult [0/2] 659s Rank 1: assembler memory usage: 158140 KiB 659s Date: Wed Mar 27 02:05:25 2024 659s Rank 1 FusionTaskCreator [2/2] 659s Statistics: all paths: 1 eliminated during fusing: 0 659s Rank 1: assembler memory usage: 158140 KiB 659s VirtualProcessor: completed jobs: 2 659s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 16720 virtual messages generated 16720 real messages (100%) 659s Rank 0: starting clear step. cycleNumber= 2 661s Rank 1 adding 0 new fusions 661s Rank 1 cleared, 1 paths 662s Rank 0 adding 0 new fusions 662s Rank 0 cleared, 0 paths 662s Rank 0 is distributing fusions [0/0] (completed) 662s Rank 1 is distributing fusions [1/1] 662s Rank 1: assembler memory usage: 158140 KiB 662s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 662s Date: Wed Mar 27 02:05:28 2024 662s Rank 0: assembler memory usage: 125416 KiB 662s Date: Wed Mar 27 02:05:28 2024 662s Rank 1 is distributing fusions [1/1] (completed) 662s Rank 1 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 7 real messages (0.721649%) 662s Rank 1: assembler memory usage: 158140 KiB 662s Date: Wed Mar 27 02:05:28 2024 662s Rank 0 JoinerTaskCreator [0/0] 662s Rank 1 JoinerTaskCreator assignNextTask [0/2] 662s Statistics: all paths: 0 eliminated during joining: 0 662s Rank 0: assembler memory usage: 125416 KiB 662s Rank 1: assembler memory usage: 158140 KiB 662s Date: Wed Mar 27 02:05:28 2024 662s Date: Wed Mar 27 02:05:28 2024 662s VirtualProcessor: completed jobs: 0 662s Rank 0 : VirtualCommunicator (service provided by VirtualCommunicator): 0 virtual messages generated 0 real messages (0%) 662s Rank 1 JoinerTaskCreator processWorkerResult [0/2] 662s Rank 1: assembler memory usage: 158140 KiB 662s Date: Wed Mar 27 02:05:28 2024 662s Rank 1 JoinerTaskCreator [2/2] 662s Statistics: all paths: 1 eliminated during joining: 0 662s Rank 1: assembler memory usage: 158140 KiB 662s Date: Wed Mar 27 02:05:28 2024 662s VirtualProcessor: completed jobs: 2 662s Rank 1 : VirtualCommunicator (service provided by VirtualCommunicator): 19630 virtual messages generated 19630 real messages (100%) 664s Rank 1 adding 0 new fusions 664s Rank 0 adding 0 new fusions 664s Rank 1 cleared, 1 paths 664s Rank 0 cleared, 0 paths 664s Rank 0: starting distribution step 664s Rank 0 is distributing fusions [0/0] (completed) 664s Rank 1 is distributing fusions [1/1] 664s Rank 1: assembler memory usage: 158140 KiB 664s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 664s Rank 0: assembler memory usage: 125416 KiB 664s Date: Wed Mar 27 02:05:30 2024 664s Date: Wed Mar 27 02:05:30 2024 664s Rank 1 is distributing fusions [1/1] (completed) 664s Rank 1 : VirtualCommunicator (service provided by BufferedData): 970 virtual messages generated 7 real messages (0.721649%) 664s Rank 1: assembler memory usage: 158140 KiB 664s Date: Wed Mar 27 02:05:30 2024 664s Rank 0 cycleNumber= 2 664s 664s *** 664s Step: Merging of redundant paths 664s Date: Wed Mar 27 02:05:30 2024 664s Elapsed time: 14 seconds 664s Since beginning: 47 seconds 664s *** 664s 664s 664s Rank 0 appended 0 elements 664s Rank 1 appended 1 elements 664s 664s *** 664s Step: Generation of contigs 664s Date: Wed Mar 27 02:05:30 2024 664s Elapsed time: 0 seconds 664s Since beginning: 47 seconds 664s *** 664s 664s Rank 0 finished gathering scaffold links. 664s Rank 0 objectName: 1 => peakCoverage: 237 blockSize: 970 665s Rank 1: gathering scaffold links [1/1] [970/970] (completed) 665s Rank 0 ineligibleObjects: 0/970 (0.00%) 665s Rank 1: assembler memory usage: 158140 KiB 665s contig: 1 vertices: 970 averageCoverage: 237 standardDeviation: 115 peakCoverage: 237 repeatCoverage: 474 665s Rank 0 will write 1 contig lengths 665s Rank 1 finished gathering scaffold links. 665s Rank 0 will solve the scaffolding problem. 665s Welcome to GreedySolver v1.0 665s 1 vertices; 0 edges 665s 1 contigs >= 500 665s Edges in solution: 0 665s 665s Conflict statistics: 665s 1 scaffolds, 1 >= 500 665s Total: 1000 nucleotides 665s 665s *** 665s Step: Scaffolding of contigs 665s Date: Wed Mar 27 02:05:31 2024 665s Elapsed time: 1 seconds 665s Since beginning: 48 seconds 665s *** 665s 665s Rank 0 syncing with master 665s Rank 1 syncing with master 665s 665s *** 665s Step: Counting sequences to search 665s Date: Wed Mar 27 02:05:31 2024 665s Elapsed time: 0 seconds 665s Since beginning: 48 seconds 665s *** 665s 665s 665s Rank 1 will add colors, 0 sequences in 0 files to process 665s Rank 0 will add colors, 0 sequences in 0 files to process 665s Rank 1 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0.00%) 665s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 668s 668s *** 668s Step: Graph coloring 668s Date: Wed Mar 27 02:05:34 2024 668s Elapsed time: 3 seconds 668s Since beginning: 51 seconds 668s *** 668s 668s 668s Rank 0: starting SlaveMode= call_RAY_SLAVE_MODE_CONTIG_BIOLOGICAL_ABUNDANCES 668s Rank 0 shares its counts 668s [IO] Input/output operations for coverage XML objects: 1 / bufferSize: 16777216 bytes 668s Rank 1: starting SlaveMode= call_RAY_SLAVE_MODE_CONTIG_BIOLOGICAL_ABUNDANCES 668s Rank 1 computing contig abundances [1/1] [1/970] 668s Rank 1 computing contig abundances [1/1] [970/970] 668s [IO] Input/output operations for coverage XML objects: 1 / bufferSize: 16777216 bytes 668s 668s *** 668s Step: Counting contig biological abundances 668s Date: Wed Mar 27 02:05:34 2024 668s Elapsed time: 0 seconds 668s Since beginning: 51 seconds 668s *** 668s 668s 668s Rank 0 colored the graph with 0 real colors using 1 virtual colors 668s Rank 0 : VirtualCommunicator (service provided by BufferedData): 0 virtual messages generated 0 real messages (0%) 668s Rank 1 colored the graph with 0 real colors using 1 virtual colors 668s Rank 1 : VirtualCommunicator (service provided by BufferedData): 3880 virtual messages generated 9 real messages (0.23%) 668s 668s *** 668s Step: Counting sequence biological abundances 668s Date: Wed Mar 27 02:05:34 2024 668s Elapsed time: 0 seconds 668s Since beginning: 51 seconds 668s *** 668s 668s 668s [IO] Input/output operations for sequence XML objects: 0 / bufferSize: 16777216 bytes 668s [IO] Input/output operations for sequence XML objects: 0 / bufferSize: 16777216 bytes 668s [IO] Input/output operations for identification TSV objects: 0 / bufferSize: 16777216 bytes 668s [IO] Input/output operations for identification TSV objects: 0 / bufferSize: 16777216 bytes 671s Rank 1 has exactly 0 k-mer physical colors for the phylogeny. 671s Rank 0 has exactly 0 k-mer physical colors for the phylogeny. 671s 671s 671s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 671s Rank 0 is starting taxon syncing across the compute tribe. 671s 671s *** 671s Step: Loading taxons 671s Date: Wed Mar 27 02:05:37 2024 671s Elapsed time: 3 seconds 671s Since beginning: 54 seconds 671s *** 671s 671s Rank 0 synced taxons across the grid with 2 poor slaves. 671s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 671s [TaxonomyViewer::copyTaxonsFromSecondaryTable] 0 -> 0 671s Rank 0 has 0 taxons after syncing with master 671s Rank 1 has 0 taxons after syncing with master 674s 674s 674s 674s *** 674s Step: Loading tree 674s Date: Wed Mar 27 02:05:39 2024 674s Elapsed time: 2 seconds 674s Since beginning: 56 seconds 674s *** 674s 677s Rank 0 has exactly 0 k-mer physical colors related to EMBL CDS objects. 677s Rank 1 has exactly 0 k-mer physical colors related to EMBL CDS objects. 677s 677s Rank 1: counting ontology terms in the graph... 677s 677s Rank 0: counting ontology terms in the graph... 679s Rank 1: 0 have some biological signal 679s Number of dereferenced alternate handles: 0 679s Number of k-mer observations with gene ontology terms: 0 680s Rank 0: 0 have some biological signal 680s Number of dereferenced alternate handles: 0 680s Number of k-mer observations with gene ontology terms: 0 680s Rank 0: synced ontology term profiles with master 680s Rank 0 Synchronizing kmer observations with gene ontology terms: 0 (from 1) 680s Rank 1: synced ontology term profiles with master 680s Rank 0: synchronization is complete! 680s Rank 0: ontology terms with biological signal: 0 680s Populated recursive values... 680s Gene ontology terms without depth information: 0 680s [GeneOntology] maximum depth for GeneOntologyDomain  is 0 680s [GeneOntology] maximum depth for GeneOntologyDomain [GeneOntology] maximum depth for GeneOntologyDomain  is 0 680s 680s *** 680s Step: Processing gene ontologies 680s Date: Wed Mar 27 02:05:45 2024 680s Elapsed time: 6 seconds 680s Since beginning: 1 minutes, 2 seconds 680s *** 680s 680s Rank 0: the CorePlugin GenomeNeighbourhood is disabled... 680s Rank 1: the CorePlugin GenomeNeighbourhood is disabled... 680s [GenomeNeighbourhood] in final list: 0 680s 680s *** 680s Step: Computing neighbourhoods 680s Date: Wed Mar 27 02:05:45 2024 680s Elapsed time: 0 seconds 680s Since beginning: 1 minutes, 2 seconds 680s *** 680s 680s Contigs >= 100 nt 680s Number: 1 680s Total length: 1000 680s Average: 1000 680s N50: 1000 680s Median: 1000 680s Largest: 1000 680s Contigs >= 500 nt 680s Number: 1 680s Total length: 1000 680s Average: 1000 680s N50: 1000 680s Median: 1000 680s Largest: 1000 680s Scaffolds >= 100 nt 680s Number: 1 680s Total length: 1000 680s Average: 1000 680s N50: 1000 680s Median: 1000 680s Largest: 1000 680s Scaffolds >= 500 nt 680s Number: 1 680s Total length: 1000 680s Average: 1000 680s N50: 1000 680s Median: 1000 680s Largest: 1000 680s 680s Rank 0 wrote test3/Contigs.fasta 680s Rank 0 wrote test3/Scaffolds.fasta 680s Check for test3/* 680s 680s 680s autopkgtest [02:05:46]: test run-unit-test: -----------------------] 681s autopkgtest [02:05:47]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 681s run-unit-test PASS 681s autopkgtest [02:05:47]: @@@@@@@@@@@@@@@@@@@@ summary 681s run-unit-test PASS 720s Creating nova instance adt-noble-s390x-ray-20240327-015426-juju-7f2275-prod-proposed-migration-environment-3-703a56bf-af27-43ca-95ad-dddfcd558b3b from image adt/ubuntu-noble-s390x-server-20240327.img (UUID 2274866b-dd05-444a-bb80-9d56992242ed)...