0s autopkgtest [02:20:33]: starting date and time: 2024-03-28 02:20:33+0000 0s autopkgtest [02:20:33]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [02:20:33]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._dn2vqns/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade r-cran-survey --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-19.secgroup --name adt-noble-s390x-r-cran-survey-20240328-022032-juju-7f2275-prod-proposed-migration-environment-2-844dc728-20ee-4424-bf4a-d60c5cbc27fc --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 162s autopkgtest [02:23:15]: testbed dpkg architecture: s390x 162s autopkgtest [02:23:15]: testbed apt version: 2.7.12 162s autopkgtest [02:23:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 163s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 164s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B] 164s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3949 kB] 165s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [471 kB] 165s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [55.9 kB] 165s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [648 kB] 166s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 166s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 166s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 166s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4036 kB] 167s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 167s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.2 kB] 167s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 169s Fetched 9343 kB in 5s (1990 kB/s) 169s Reading package lists... 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 171s Calculating upgrade... 171s The following packages will be upgraded: 171s binutils binutils-common binutils-s390x-linux-gnu dmsetup gcc-13-base 171s gcc-14-base initramfs-tools initramfs-tools-bin initramfs-tools-core jq 171s libbinutils libctf-nobfd0 libctf0 libdevmapper1.02.1 libexpat1 libftdi1-2 171s libgcc-s1 libjq1 libpam-modules libpam-modules-bin libpam-runtime libpam0g 171s libseccomp2 libsframe1 libstdc++6 libusb-1.0-0 171s 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 171s Need to get 5444 kB of archives. 171s After this operation, 17.4 kB of additional disk space will be used. 171s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x libpam0g s390x 1.5.3-5ubuntu3 [69.8 kB] 172s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libpam-modules-bin s390x 1.5.3-5ubuntu3 [57.4 kB] 172s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libpam-modules s390x 1.5.3-5ubuntu3 [289 kB] 172s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x gcc-14-base s390x 14-20240315-1ubuntu1 [47.0 kB] 172s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++6 s390x 14-20240315-1ubuntu1 [908 kB] 173s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-s1 s390x 14-20240315-1ubuntu1 [35.9 kB] 173s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libpam-runtime all 1.5.3-5ubuntu3 [40.8 kB] 173s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libseccomp2 s390x 2.5.5-1ubuntu2 [53.4 kB] 173s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libdevmapper1.02.1 s390x 2:1.02.185-3ubuntu2 [142 kB] 173s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x dmsetup s390x 2:1.02.185-3ubuntu2 [80.4 kB] 173s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libexpat1 s390x 2.6.1-2 [94.8 kB] 173s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libusb-1.0-0 s390x 2:1.0.27-1 [54.8 kB] 173s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libctf0 s390x 2.42-4ubuntu1 [98.4 kB] 173s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libctf-nobfd0 s390x 2.42-4ubuntu1 [100 kB] 173s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x binutils-s390x-linux-gnu s390x 2.42-4ubuntu1 [2270 kB] 174s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libbinutils s390x 2.42-4ubuntu1 [477 kB] 174s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x binutils s390x 2.42-4ubuntu1 [3056 B] 174s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x binutils-common s390x 2.42-4ubuntu1 [217 kB] 174s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libsframe1 s390x 2.42-4ubuntu1 [14.2 kB] 174s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-base s390x 13.2.0-21ubuntu1 [48.3 kB] 174s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools all 0.142ubuntu23 [9058 B] 174s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools-core all 0.142ubuntu23 [50.1 kB] 174s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools-bin s390x 0.142ubuntu23 [20.5 kB] 174s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x jq s390x 1.7.1-3 [66.5 kB] 175s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libjq1 s390x 1.7.1-3 [168 kB] 175s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libftdi1-2 s390x 1.5-6build4 [29.3 kB] 175s Preconfiguring packages ... 175s Fetched 5444 kB in 3s (1587 kB/s) 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 175s Preparing to unpack .../libpam0g_1.5.3-5ubuntu3_s390x.deb ... 175s Unpacking libpam0g:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 175s Setting up libpam0g:s390x (1.5.3-5ubuntu3) ... 175s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 175s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu3_s390x.deb ... 175s Unpacking libpam-modules-bin (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 175s Setting up libpam-modules-bin (1.5.3-5ubuntu3) ... 175s pam_namespace.service is a disabled or a static unit not running, not starting it. 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 176s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu3_s390x.deb ... 176s Unpacking libpam-modules:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 176s Setting up libpam-modules:s390x (1.5.3-5ubuntu3) ... 176s Installing new version of config file /etc/security/namespace.init ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../gcc-14-base_14-20240315-1ubuntu1_s390x.deb ... 176s Unpacking gcc-14-base:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 176s Setting up gcc-14-base:s390x (14-20240315-1ubuntu1) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../libstdc++6_14-20240315-1ubuntu1_s390x.deb ... 176s Unpacking libstdc++6:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 176s Setting up libstdc++6:s390x (14-20240315-1ubuntu1) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../libgcc-s1_14-20240315-1ubuntu1_s390x.deb ... 176s Unpacking libgcc-s1:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 176s Setting up libgcc-s1:s390x (14-20240315-1ubuntu1) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../libpam-runtime_1.5.3-5ubuntu3_all.deb ... 176s Unpacking libpam-runtime (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 176s Setting up libpam-runtime (1.5.3-5ubuntu3) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu2_s390x.deb ... 176s Unpacking libseccomp2:s390x (2.5.5-1ubuntu2) over (2.5.5-1ubuntu1) ... 176s Setting up libseccomp2:s390x (2.5.5-1ubuntu2) ... 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 176s Preparing to unpack .../00-libdevmapper1.02.1_2%3a1.02.185-3ubuntu2_s390x.deb ... 176s Unpacking libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 176s Preparing to unpack .../01-dmsetup_2%3a1.02.185-3ubuntu2_s390x.deb ... 176s Unpacking dmsetup (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 176s Preparing to unpack .../02-libexpat1_2.6.1-2_s390x.deb ... 176s Unpacking libexpat1:s390x (2.6.1-2) over (2.6.0-1) ... 176s Preparing to unpack .../03-libusb-1.0-0_2%3a1.0.27-1_s390x.deb ... 176s Unpacking libusb-1.0-0:s390x (2:1.0.27-1) over (2:1.0.26-1) ... 176s Preparing to unpack .../04-libctf0_2.42-4ubuntu1_s390x.deb ... 176s Unpacking libctf0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../05-libctf-nobfd0_2.42-4ubuntu1_s390x.deb ... 176s Unpacking libctf-nobfd0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../06-binutils-s390x-linux-gnu_2.42-4ubuntu1_s390x.deb ... 176s Unpacking binutils-s390x-linux-gnu (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../07-libbinutils_2.42-4ubuntu1_s390x.deb ... 176s Unpacking libbinutils:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../08-binutils_2.42-4ubuntu1_s390x.deb ... 176s Unpacking binutils (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../09-binutils-common_2.42-4ubuntu1_s390x.deb ... 176s Unpacking binutils-common:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../10-libsframe1_2.42-4ubuntu1_s390x.deb ... 176s Unpacking libsframe1:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 176s Preparing to unpack .../11-gcc-13-base_13.2.0-21ubuntu1_s390x.deb ... 176s Unpacking gcc-13-base:s390x (13.2.0-21ubuntu1) over (13.2.0-17ubuntu2) ... 176s Preparing to unpack .../12-initramfs-tools_0.142ubuntu23_all.deb ... 176s Unpacking initramfs-tools (0.142ubuntu23) over (0.142ubuntu20) ... 176s Preparing to unpack .../13-initramfs-tools-core_0.142ubuntu23_all.deb ... 176s Unpacking initramfs-tools-core (0.142ubuntu23) over (0.142ubuntu20) ... 176s Preparing to unpack .../14-initramfs-tools-bin_0.142ubuntu23_s390x.deb ... 176s Unpacking initramfs-tools-bin (0.142ubuntu23) over (0.142ubuntu20) ... 176s Preparing to unpack .../15-jq_1.7.1-3_s390x.deb ... 176s Unpacking jq (1.7.1-3) over (1.7.1-2) ... 176s Preparing to unpack .../16-libjq1_1.7.1-3_s390x.deb ... 176s Unpacking libjq1:s390x (1.7.1-3) over (1.7.1-2) ... 177s Preparing to unpack .../17-libftdi1-2_1.5-6build4_s390x.deb ... 177s Unpacking libftdi1-2:s390x (1.5-6build4) over (1.5-6build3) ... 177s Setting up libexpat1:s390x (2.6.1-2) ... 177s Setting up libjq1:s390x (1.7.1-3) ... 177s Setting up binutils-common:s390x (2.42-4ubuntu1) ... 177s Setting up libctf-nobfd0:s390x (2.42-4ubuntu1) ... 177s Setting up libsframe1:s390x (2.42-4ubuntu1) ... 177s Setting up gcc-13-base:s390x (13.2.0-21ubuntu1) ... 177s Setting up libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) ... 177s Setting up dmsetup (2:1.02.185-3ubuntu2) ... 177s Setting up jq (1.7.1-3) ... 177s Setting up libusb-1.0-0:s390x (2:1.0.27-1) ... 177s Setting up libbinutils:s390x (2.42-4ubuntu1) ... 177s Setting up initramfs-tools-bin (0.142ubuntu23) ... 177s Setting up libctf0:s390x (2.42-4ubuntu1) ... 177s Setting up binutils-s390x-linux-gnu (2.42-4ubuntu1) ... 177s Setting up binutils (2.42-4ubuntu1) ... 177s Setting up libftdi1-2:s390x (1.5-6build4) ... 177s Setting up initramfs-tools-core (0.142ubuntu23) ... 177s Setting up initramfs-tools (0.142ubuntu23) ... 177s update-initramfs: deferring update (trigger activated) 177s Processing triggers for man-db (2.12.0-3) ... 177s Processing triggers for libc-bin (2.39-0ubuntu6) ... 177s Processing triggers for initramfs-tools (0.142ubuntu23) ... 177s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 177s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 181s Using config file '/etc/zipl.conf' 181s Building bootmap in '/boot' 181s Adding IPL section 'ubuntu' (default) 181s Preparing boot device for LD-IPL: vda (0000). 181s Done. 181s Reading package lists... 181s Building dependency tree... 181s Reading state information... 181s 0 upgraded, 0 newly installed, 0 to remove and 217 not upgraded. 182s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 182s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 182s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 182s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 183s Reading package lists... 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 184s Calculating upgrade... 184s The following packages were automatically installed and are no longer required: 184s libaio1 libnetplan0 python3-distutils python3-lib2to3 184s Use 'sudo apt autoremove' to remove them. 184s The following packages will be REMOVED: 184s libapt-pkg6.0 libarchive13 libatm1 libcurl3-gnutls libcurl4 libdb5.3 libelf1 184s libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libgpgme11 184s libhogweed6 libmagic1 libnettle8 libnpth0 libnvme1 libparted2 libperl5.38 184s libpng16-16 libpsl5 libreadline8 libreiserfscore0 libssl3 libtirpc3 liburcu8 184s libuv1 184s The following NEW packages will be installed: 184s bpfcc-tools bpftrace fontconfig-config fonts-dejavu-core fonts-dejavu-mono 184s hwdata ieee-data libaio1t64 libapt-pkg6.0t64 libarchive13t64 libatm1t64 184s libbpfcc libc-dev-bin libc-devtools libc6-dev libclang-cpp18 libclang1-18 184s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 184s libdw1t64 libelf1t64 libext2fs2t64 libfontconfig1 libfreetype6 libgd3 184s libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgpgme11t64 184s libhogweed6t64 libjbig0 libjpeg-turbo8 libjpeg8 libllvm18 libmagic1t64 184s libnetplan1 libnettle8t64 libnpth0t64 libnvme1t64 libparted2t64 184s libperl5.38t64 libpng16-16t64 libpsl5t64 libreadline8t64 libreiserfscore0t64 184s libsharpyuv0 libssl3t64 libtiff6 libtirpc3t64 liburcu8t64 libuv1t64 libwebp7 184s libxpm4 linux-headers-6.8.0-20 linux-headers-6.8.0-20-generic 184s linux-image-6.8.0-20-generic linux-libc-dev linux-modules-6.8.0-20-generic 184s linux-modules-extra-6.8.0-20-generic linux-tools-6.8.0-20 184s linux-tools-6.8.0-20-generic linux-tools-common manpages manpages-dev 184s python3-bpfcc python3-netaddr rpcsvc-proto ubuntu-kernel-accessories 184s xdg-user-dirs 184s The following packages have been kept back: 184s s390-tools 184s The following packages will be upgraded: 184s apparmor apt apt-utils base-files bash bind9-dnsutils bind9-host bind9-libs 184s bolt bsdextrautils bsdutils btrfs-progs coreutils cryptsetup-bin curl dbus 184s dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common 184s dbus-user-session dhcpcd-base dirmngr dpkg dpkg-dev e2fsprogs e2fsprogs-l10n 184s eject fdisk file ftp fwupd gawk gir1.2-girepository-2.0 gir1.2-glib-2.0 184s gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm gpgv 184s groff-base ibverbs-providers inetutils-telnet info install-info iproute2 184s keyboxd kmod kpartx krb5-locales libapparmor1 libaudit-common libaudit1 184s libblkid1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 184s libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 184s libblockdev-utils3 libblockdev3 libbpf1 libbrotli1 libcap-ng0 libcom-err2 184s libcryptsetup12 libdbus-1-3 libdebconfclient0 libdpkg-perl 184s libevent-core-2.1-7 libfdisk1 libfido2-1 libfwupd2 libgirepository-1.0-1 184s libglib2.0-data libgssapi-krb5-2 libgudev-1.0-0 libgusb2 libibverbs1 184s libjcat1 libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkmod2 184s libkrb5-3 libkrb5support0 libldap-common libldap2 liblocale-gettext-perl 184s liblzma5 libmagic-mgc libmbim-glib4 libmbim-proxy libmm-glib0 libmount1 184s libnghttp2-14 libnsl2 libnss-systemd libpam-systemd libplymouth5 184s libpolkit-agent-1-0 libpolkit-gobject-1-0 libproc2-0 libprotobuf-c1 184s libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib 184s libpython3.12-minimal libpython3.12-stdlib libqmi-glib5 libqmi-proxy 184s libqrtr-glib0 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db 184s libselinux1 libsemanage-common libsemanage2 libslang2 libsmartcols1 184s libsqlite3-0 libss2 libssh-4 libsystemd-shared libsystemd0 184s libtext-charwidth-perl libtext-iconv-perl libtirpc-common libudev1 184s libudisks2-0 libuuid1 libvolume-key1 libxml2 libxmlb2 libxmuu1 linux-generic 184s linux-headers-generic linux-headers-virtual linux-image-generic 184s linux-image-virtual linux-virtual logsave lshw lsof man-db motd-news-config 184s mount mtr-tiny multipath-tools netplan-generator netplan.io openssh-client 184s openssh-server openssh-sftp-server openssl parted perl perl-base 184s perl-modules-5.38 pinentry-curses plymouth plymouth-theme-ubuntu-text procps 184s python-apt-common python3 python3-apt python3-cryptography python3-dbus 184s python3-distutils python3-gdbm python3-gi python3-lib2to3 python3-minimal 184s python3-netplan python3-pkg-resources python3-pyrsistent python3-setuptools 184s python3-typing-extensions python3.11 python3.11-minimal python3.12 184s python3.12-minimal readline-common rsync rsyslog s390-tools-data 184s shared-mime-info sudo systemd systemd-dev systemd-resolved systemd-sysv 184s systemd-timesyncd tcpdump telnet tnftp ubuntu-pro-client 184s ubuntu-pro-client-l10n udev udisks2 usb.ids util-linux uuid-runtime 184s vim-common vim-tiny wget xxd xz-utils zlib1g 184s 216 upgraded, 73 newly installed, 28 to remove and 1 not upgraded. 184s Need to get 223 MB of archives. 184s After this operation, 524 MB of additional disk space will be used. 184s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x motd-news-config all 13ubuntu8 [5098 B] 184s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x base-files s390x 13ubuntu8 [74.2 kB] 184s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bash s390x 5.2.21-2ubuntu3 [845 kB] 185s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdutils s390x 1:2.39.3-9ubuntu2 [96.1 kB] 185s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbrotli1 s390x 1.1.0-2build1 [375 kB] 185s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgssapi-krb5-2 s390x 1.20.1-6ubuntu1 [149 kB] 185s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5-3 s390x 1.20.1-6ubuntu1 [360 kB] 185s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5support0 s390x 1.20.1-6ubuntu1 [34.6 kB] 185s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libk5crypto3 s390x 1.20.1-6ubuntu1 [90.3 kB] 185s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcom-err2 s390x 1.47.0-2.4~exp1ubuntu2 [22.9 kB] 185s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3.1ubuntu1 [75.7 kB] 186s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build6 [58.4 kB] 186s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udisks2 s390x 2.10.1-6 [298 kB] 186s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudisks2-0 s390x 2.10.1-6 [179 kB] 186s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblkid1 s390x 2.39.3-9ubuntu2 [128 kB] 186s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma5 s390x 5.6.0-0.2 [137 kB] 186s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kmod s390x 31+20240202-2ubuntu4 [107 kB] 186s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkmod2 s390x 31+20240202-2ubuntu4 [56.3 kB] 186s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255.4-1ubuntu5 [103 kB] 186s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-timesyncd s390x 255.4-1ubuntu5 [35.3 kB] 186s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-session-bus-common all 1.14.10-4ubuntu2 [80.3 kB] 186s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-sysv s390x 255.4-1ubuntu5 [11.9 kB] 186s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-systemd s390x 255.4-1ubuntu5 [242 kB] 186s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-user-session s390x 1.14.10-4ubuntu2 [9960 B] 186s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapparmor1 s390x 4.0.0-beta3-0ubuntu2 [50.8 kB] 186s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit-common all 1:3.1.2-2.1 [5674 B] 186s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcap-ng0 s390x 0.8.4-2build1 [15.7 kB] 186s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit1 s390x 1:3.1.2-2.1 [48.9 kB] 186s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libselinux1 s390x 3.5-2ubuntu1 [84.7 kB] 186s Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu8 [363 kB] 186s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu8 [227 kB] 186s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 187s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x wget s390x 1.21.4-1ubuntu2 [351 kB] 187s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tnftp s390x 20230507-2build1 [107 kB] 187s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tcpdump s390x 4.99.4-3ubuntu2 [490 kB] 187s Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd-shared s390x 255.4-1ubuntu5 [2131 kB] 188s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-resolved s390x 255.4-1ubuntu5 [304 kB] 188s Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x sudo s390x 1.9.15p5-3ubuntu3 [968 kB] 188s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsync s390x 3.2.7-1build1 [446 kB] 188s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-cryptography s390x 41.0.7-4build2 [918 kB] 189s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 189s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-sftp-server s390x 1:9.6p1-3ubuntu11 [39.0 kB] 189s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-client s390x 1:9.6p1-3ubuntu11 [935 kB] 190s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-server s390x 1:9.6p1-3ubuntu11 [529 kB] 190s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssh-4 s390x 0.10.6-2build1 [189 kB] 190s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules s390x 2.1.28+dfsg1-5ubuntu1 [76.6 kB] 190s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build3 [645 kB] 190s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build3 [2419 kB] 191s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build3 [829 kB] 192s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libparted2t64 s390x 3.6-3.1build2 [172 kB] 192s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main s390x parted s390x 3.6-3.1build2 [44.6 kB] 192s Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11 s390x 3.11.8-1build4 [589 kB] 192s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11-minimal s390x 3.11.8-1build4 [2280 kB] 193s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-minimal s390x 3.11.8-1build4 [838 kB] 193s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-stdlib s390x 3.11.8-1build4 [1944 kB] 194s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x shared-mime-info s390x 2.4-1build1 [474 kB] 194s Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-girepository-2.0 s390x 1.79.1-1ubuntu6 [24.5 kB] 194s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-glib-2.0 s390x 2.79.3-3ubuntu5 [180 kB] 194s Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgirepository-1.0-1 s390x 1.79.1-1ubuntu6 [84.0 kB] 194s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gi s390x 3.47.0-3build1 [236 kB] 194s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-dbus s390x 1.3.2-5build2 [100 kB] 194s Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnetplan1 s390x 1.0-1 [123 kB] 194s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-netplan s390x 1.0-1 [23.0 kB] 194s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan-generator s390x 1.0-1 [59.1 kB] 195s Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan.io s390x 1.0-1 [65.4 kB] 195s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmlb2 s390x 0.3.15-1build1 [70.6 kB] 195s Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgpgme11t64 s390x 1.18.0-4.1ubuntu3 [150 kB] 195s Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libvolume-key1 s390x 0.3.12-7build1 [40.8 kB] 195s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqrtr-glib0 s390x 1.2.2-1ubuntu3 [17.5 kB] 195s Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-glib5 s390x 1.35.2-0ubuntu1 [918 kB] 195s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-proxy s390x 1.35.2-0ubuntu1 [6122 B] 195s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-agent-1-0 s390x 124-1ubuntu1 [17.8 kB] 195s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-gobject-1-0 s390x 124-1ubuntu1 [48.3 kB] 195s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmm-glib0 s390x 1.23.4-0ubuntu1 [251 kB] 195s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-glib4 s390x 1.31.2-0ubuntu2 [238 kB] 195s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-proxy s390x 1.31.2-0ubuntu2 [6154 B] 195s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-common all 1.8.0-2build1 [4210 B] 195s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-0 s390x 1.8.0-2build1 [68.4 kB] 196s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgusb2 s390x 0.4.8-1build1 [39.0 kB] 196s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgudev-1.0-0 s390x 1:238-3ubuntu2 [15.7 kB] 196s Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libarchive13t64 s390x 3.7.2-1.1ubuntu2 [419 kB] 196s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fwupd s390x 1.9.15-2 [4435 kB] 199s Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu8 [356 kB] 199s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfwupd2 s390x 1.9.15-2 [136 kB] 199s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev3 s390x 3.1.0-1build1 [52.3 kB] 199s Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-utils3 s390x 3.1.0-1build1 [19.2 kB] 199s Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-swap3 s390x 3.1.0-1build1 [7778 B] 199s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-part3 s390x 3.1.0-1build1 [15.4 kB] 199s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnvme1t64 s390x 1.8-3 [78.7 kB] 199s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-nvme3 s390x 3.1.0-1build1 [18.3 kB] 199s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-mdraid3 s390x 3.1.0-1build1 [13.2 kB] 199s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-loop3 s390x 3.1.0-1build1 [7138 B] 199s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main s390x logsave s390x 1.47.0-2.4~exp1ubuntu2 [22.5 kB] 199s Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs-l10n all 1.47.0-2.4~exp1ubuntu2 [5996 B] 199s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libext2fs2t64 s390x 1.47.0-2.4~exp1ubuntu2 [235 kB] 199s Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs s390x 1.47.0-2.4~exp1ubuntu2 [615 kB] 200s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x libreiserfscore0t64 s390x 1:3.6.27-7.1 [85.5 kB] 200s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x btrfs-progs s390x 6.6.3-1.1build1 [959 kB] 200s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-fs3 s390x 3.1.0-1build1 [36.5 kB] 200s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-crypto3 s390x 3.1.0-1build1 [21.6 kB] 200s Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bolt s390x 0.9.6-2build1 [142 kB] 201s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-0t64 s390x 2.79.3-3ubuntu5 [1566 kB] 202s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjcat1 s390x 0.2.0-2build2 [34.4 kB] 202s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu6 [202 kB] 202s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client-l10n s390x 31.2.2 [19.4 kB] 202s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client s390x 31.2.2 [214 kB] 202s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-utils s390x 2.4.4-2ubuntu15 [116 kB] 202s Get:108 http://ftpmaster.internal/ubuntu noble-proposed/main s390x keyboxd s390x 2.4.4-2ubuntu15 [83.1 kB] 202s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libnpth0t64 s390x 1.6-3.1 [8148 B] 202s Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgv s390x 2.4.4-2ubuntu15 [165 kB] 202s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-wks-client s390x 2.4.4-2ubuntu15 [76.8 kB] 202s Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-agent s390x 2.4.4-2ubuntu15 [240 kB] 202s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg s390x 2.4.4-2ubuntu15 [589 kB] 202s Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dirmngr s390x 2.4.4-2ubuntu15 [340 kB] 203s Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg all 2.4.4-2ubuntu15 [359 kB] 203s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-apt s390x 2.7.7 [171 kB] 203s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt-utils s390x 2.7.14 [214 kB] 203s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapt-pkg6.0t64 s390x 2.7.14 [1014 kB] 203s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB] 203s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB] 203s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB] 203s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt s390x 2.7.14 [1390 kB] 204s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgconf s390x 2.4.4-2ubuntu15 [111 kB] 204s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgsm s390x 2.4.4-2ubuntu15 [244 kB] 204s Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-4 [170 kB] 204s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gawk s390x 1:5.2.1-2build2 [496 kB] 204s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fdisk s390x 2.39.3-9ubuntu2 [124 kB] 204s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build3 [2046 kB] 204s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-base s390x 5.38.2-3.2 [1961 kB] 204s Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-modules-5.38 all 5.38.2-3.2 [3110 kB] 204s Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gdbm s390x 3.12.2-3ubuntu1.1 [19.0 kB] 204s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x man-db s390x 2.12.0-3build4 [1246 kB] 205s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm6t64 s390x 1.23-5.1 [36.4 kB] 205s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm-compat4t64 s390x 1.23-5.1 [6880 B] 205s Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libperl5.38t64 s390x 5.38.2-3.2 [5007 kB] 205s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl s390x 5.38.2-3.2 [231 kB] 205s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-6 [763 kB] 205s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-5ubuntu1 [21.1 kB] 205s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-2 s390x 2.1.28+dfsg1-5ubuntu1 [57.8 kB] 205s Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfido2-1 s390x 1.14.0-1build1 [81.0 kB] 205s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcryptsetup12 s390x 2:2.7.0-1ubuntu2 [264 kB] 205s Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dhcpcd-base s390x 1:10.0.6-1ubuntu2 [217 kB] 205s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuv1t64 s390x 1.48.0-1.1 [101 kB] 205s Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-host s390x 1:9.18.24-0ubuntu3 [50.5 kB] 205s Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-dnsutils s390x 1:9.18.24-0ubuntu3 [162 kB] 205s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-libs s390x 1:9.18.24-0ubuntu3 [1243 kB] 205s Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 205s Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnss-systemd s390x 255.4-1ubuntu5 [166 kB] 205s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudev1 s390x 255.4-1ubuntu5 [178 kB] 205s Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd s390x 255.4-1ubuntu5 [3533 kB] 206s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udev s390x 255.4-1ubuntu5 [1887 kB] 206s Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd0 s390x 255.4-1ubuntu5 [443 kB] 206s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-system-bus-common all 1.14.10-4ubuntu2 [81.5 kB] 206s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-bin s390x 1.14.10-4ubuntu2 [41.4 kB] 206s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus s390x 1.14.10-4ubuntu2 [24.3 kB] 206s Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-daemon s390x 1.14.10-4ubuntu2 [118 kB] 206s Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdbus-1-3 s390x 1.14.10-4ubuntu2 [213 kB] 206s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmount1 s390x 2.39.3-9ubuntu2 [138 kB] 206s Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuuid1 s390x 2.39.3-9ubuntu2 [35.6 kB] 206s Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfdisk1 s390x 2.39.3-9ubuntu2 [151 kB] 206s Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mount s390x 2.39.3-9ubuntu2 [119 kB] 206s Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsqlite3-0 s390x 3.45.1-1ubuntu1 [747 kB] 206s Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg s390x 1.22.6ubuntu5 [1278 kB] 206s Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-minimal s390x 3.12.2-0ubuntu1 [27.1 kB] 206s Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3 s390x 3.12.2-0ubuntu1 [24.1 kB] 206s Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-stdlib s390x 3.12.2-0ubuntu1 [9804 B] 206s Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsmartcols1 s390x 2.39.3-9ubuntu2 [67.9 kB] 206s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdextrautils s390x 2.39.3-9ubuntu2 [76.3 kB] 206s Get:169 http://ftpmaster.internal/ubuntu noble-proposed/main s390x groff-base s390x 1.23.0-3build1 [1049 kB] 206s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main s390x pinentry-curses s390x 1.2.1-3ubuntu4 [37.6 kB] 206s Get:171 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-4 [56.4 kB] 206s Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxml2 s390x 2.9.14+dfsg-1.3ubuntu2 [818 kB] 206s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbpf1 s390x 1:1.3.0-2build1 [176 kB] 206s Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libelf1t64 s390x 0.190-1.1build2 [69.7 kB] 206s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-common all 1.3.4+ds-1.1 [8018 B] 206s Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lsof s390x 4.95.0-1build2 [248 kB] 206s Get:177 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl2 s390x 1.3.0-3build2 [44.1 kB] 206s Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc3t64 s390x 1.3.4+ds-1.1 [85.8 kB] 206s Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main s390x iproute2 s390x 6.1.0-1ubuntu5 [1156 kB] 206s Get:180 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libprotobuf-c1 s390x 1.4.1-1ubuntu3 [23.4 kB] 206s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnghttp2-14 s390x 1.59.0-1build1 [77.8 kB] 206s Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libproc2-0 s390x 2:4.0.4-4ubuntu2 [60.1 kB] 206s Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main s390x procps s390x 2:4.0.4-4ubuntu2 [724 kB] 206s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main s390x coreutils s390x 9.4-3ubuntu3 [1482 kB] 206s Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main s390x util-linux s390x 2.39.3-9ubuntu2 [1143 kB] 206s Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main s390x file s390x 1:5.45-3 [22.2 kB] 206s Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic-mgc s390x 1:5.45-3 [305 kB] 206s Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic1t64 s390x 1:5.45-3 [93.1 kB] 206s Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libplymouth5 s390x 24.004.60-1ubuntu6 [151 kB] 206s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB] 206s Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main s390x multipath-tools s390x 0.9.4-5ubuntu6 [318 kB] 206s Get:192 http://ftpmaster.internal/ubuntu noble/main s390x liburcu8t64 s390x 0.14.0-3.1 [67.3 kB] 206s Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblocale-gettext-perl s390x 1.07-6ubuntu4 [15.8 kB] 206s Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main s390x uuid-runtime s390x 2.39.3-9ubuntu2 [33.4 kB] 207s Get:195 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdebconfclient0 s390x 0.271ubuntu2 [11.4 kB] 207s Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage-common all 3.5-1build4 [10.1 kB] 207s Get:197 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage2 s390x 3.5-1build4 [96.7 kB] 207s Get:198 http://ftpmaster.internal/ubuntu noble-proposed/main s390x install-info s390x 7.1-3build1 [64.5 kB] 207s Get:199 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libss2 s390x 1.47.0-2.4~exp1ubuntu2 [17.2 kB] 207s Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main s390x eject s390x 2.39.3-9ubuntu2 [26.2 kB] 207s Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main s390x krb5-locales all 1.20.1-6ubuntu1 [13.8 kB] 207s Get:202 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 207s Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libslang2 s390x 2.3.3-3build1 [501 kB] 207s Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-charwidth-perl s390x 0.04-11build2 [9484 B] 207s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-iconv-perl s390x 1.7-8build2 [13.8 kB] 207s Get:206 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python-apt-common all 2.7.7 [19.8 kB] 207s Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-setuptools all 68.1.2-2ubuntu1 [396 kB] 207s Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] 207s Get:209 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsyslog s390x 8.2312.0-3ubuntu7 [536 kB] 207s Get:210 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-tiny s390x 2:9.1.0016-1ubuntu6 [879 kB] 208s Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-common all 2:9.1.0016-1ubuntu6 [385 kB] 208s Get:212 http://ftpmaster.internal/ubuntu noble/main s390x xdg-user-dirs s390x 0.18-1 [18.5 kB] 208s Get:213 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xxd s390x 2:9.1.0016-1ubuntu6 [63.5 kB] 208s Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apparmor s390x 4.0.0-beta3-0ubuntu2 [710 kB] 208s Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ftp all 20230507-2build1 [4724 B] 208s Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main s390x inetutils-telnet s390x 2:2.5-3ubuntu3 [105 kB] 208s Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main s390x info s390x 7.1-3build1 [152 kB] 208s Get:218 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmuu1 s390x 2:1.1.3-3build1 [8860 B] 208s Get:219 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lshw s390x 02.19.git.2021.06.19.996aaad9c7-2build2 [346 kB] 208s Get:220 http://ftpmaster.internal/ubuntu noble/main s390x manpages all 6.05.01-1 [1340 kB] 208s Get:221 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mtr-tiny s390x 0.95-1.1build1 [57.0 kB] 208s Get:222 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth-theme-ubuntu-text s390x 24.004.60-1ubuntu6 [10.2 kB] 208s Get:223 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth s390x 24.004.60-1ubuntu6 [147 kB] 208s Get:224 http://ftpmaster.internal/ubuntu noble-proposed/main s390x telnet all 0.17+2.5-3ubuntu3 [3682 B] 208s Get:225 http://ftpmaster.internal/ubuntu noble-proposed/main s390x usb.ids all 2024.03.18-1 [223 kB] 208s Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xz-utils s390x 5.6.0-0.2 [274 kB] 208s Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libllvm18 s390x 1:18.1.2-1ubuntu2 [33.4 MB] 211s Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang-cpp18 s390x 1:18.1.2-1ubuntu2 [16.1 MB] 212s Get:229 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpfcc s390x 0.29.1+ds-1ubuntu4 [697 kB] 212s Get:230 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-bpfcc all 0.29.1+ds-1ubuntu4 [40.2 kB] 212s Get:231 http://ftpmaster.internal/ubuntu noble/main s390x ieee-data all 20220827.1 [2113 kB] 212s Get:232 http://ftpmaster.internal/ubuntu noble/main s390x python3-netaddr all 0.8.0-2ubuntu1 [319 kB] 212s Get:233 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpfcc-tools all 0.29.1+ds-1ubuntu4 [687 kB] 212s Get:234 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang1-18 s390x 1:18.1.2-1ubuntu2 [9349 kB] 213s Get:235 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdw1t64 s390x 0.190-1.1build2 [286 kB] 213s Get:236 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpftrace s390x 0.20.2-1ubuntu1 [1139 kB] 213s Get:237 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cryptsetup-bin s390x 2:2.7.0-1ubuntu2 [211 kB] 213s Get:238 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg-dev all 1.22.6ubuntu5 [1074 kB] 213s Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdpkg-perl all 1.22.6ubuntu5 [269 kB] 213s Get:240 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 213s Get:241 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 213s Get:242 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu1 [37.4 kB] 213s Get:243 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-l10n all 2.4.4-2ubuntu15 [65.8 kB] 213s Get:244 http://ftpmaster.internal/ubuntu noble/main s390x hwdata all 0.379-1 [29.1 kB] 213s Get:245 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libibverbs1 s390x 50.0-2build1 [70.0 kB] 213s Get:246 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ibverbs-providers s390x 50.0-2build1 [408 kB] 213s Get:247 http://ftpmaster.internal/ubuntu noble/main s390x libaio1t64 s390x 0.3.113-6 [7290 B] 213s Get:248 http://ftpmaster.internal/ubuntu noble/main s390x libatm1t64 s390x 1:2.5.1-5.1 [24.5 kB] 213s Get:249 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu6 [20.2 kB] 213s Get:250 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfreetype6 s390x 2.13.2+dfsg-1build2 [437 kB] 213s Get:251 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu1 [150 kB] 213s Get:252 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 213s Get:253 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 213s Get:254 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 213s Get:255 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 213s Get:256 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsharpyuv0 s390x 1.3.2-0.4build2 [14.9 kB] 213s Get:257 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwebp7 s390x 1.3.2-0.4build2 [207 kB] 213s Get:258 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu1 [218 kB] 213s Get:259 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxpm4 s390x 1:3.5.17-1build1 [41.4 kB] 213s Get:260 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgd3 s390x 2.3.3-9ubuntu3 [141 kB] 213s Get:261 http://ftpmaster.internal/ubuntu noble/main s390x libc-devtools s390x 2.39-0ubuntu6 [30.6 kB] 213s Get:262 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-libc-dev s390x 6.8.0-20.20 [1592 kB] 213s Get:263 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 213s Get:264 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 213s Get:265 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu6 [1629 kB] 213s Get:266 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-core-2.1-7 s390x 2.1.12-stable-9build1 [94.3 kB] 213s Get:267 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap-common all 2.6.7+dfsg-1~exp1ubuntu6 [31.3 kB] 213s Get:268 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-6.8.0-20-generic s390x 6.8.0-20.20 [21.0 MB] 215s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-6.8.0-20-generic s390x 6.8.0-20.20 [9872 kB] 215s Get:270 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-extra-6.8.0-20-generic s390x 6.8.0-20.20 [11.7 MB] 216s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-generic s390x 6.8.0-20.20+1 [1734 B] 216s Get:272 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-generic s390x 6.8.0-20.20+1 [9688 B] 216s Get:273 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-virtual s390x 6.8.0-20.20+1 [1682 B] 216s Get:274 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-virtual s390x 6.8.0-20.20+1 [9700 B] 216s Get:275 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-virtual s390x 6.8.0-20.20+1 [1642 B] 216s Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20 all 6.8.0-20.20 [13.6 MB] 218s Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20-generic s390x 6.8.0-20.20 [2579 kB] 218s Get:278 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-generic s390x 6.8.0-20.20+1 [9608 B] 218s Get:279 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-common all 6.8.0-20.20 [437 kB] 218s Get:280 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20 s390x 6.8.0-20.20 [2674 kB] 218s Get:281 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20-generic s390x 6.8.0-20.20 [1724 B] 218s Get:282 http://ftpmaster.internal/ubuntu noble/main s390x manpages-dev all 6.05.01-1 [2018 kB] 219s Get:283 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-distutils all 3.12.2-3ubuntu1.1 [133 kB] 219s Get:284 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB] 219s Get:285 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pyrsistent s390x 0.20.0-1build1 [55.8 kB] 219s Get:286 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-typing-extensions all 4.10.0-1 [60.7 kB] 219s Get:287 http://ftpmaster.internal/ubuntu noble-proposed/main s390x s390-tools-data all 2.31.0-0ubuntu3 [17.8 kB] 219s Get:288 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-kernel-accessories s390x 1.536build1 [10.5 kB] 219s Get:289 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kpartx s390x 0.9.4-5ubuntu6 [32.8 kB] 219s Preconfiguring packages ... 219s Fetched 223 MB in 35s (6429 kB/s) 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 220s Preparing to unpack .../motd-news-config_13ubuntu8_all.deb ... 220s Unpacking motd-news-config (13ubuntu8) over (13ubuntu7) ... 220s Preparing to unpack .../base-files_13ubuntu8_s390x.deb ... 220s Unpacking base-files (13ubuntu8) over (13ubuntu7) ... 220s Setting up base-files (13ubuntu8) ... 220s motd-news.service is a disabled or a static unit not running, not starting it. 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 220s Preparing to unpack .../bash_5.2.21-2ubuntu3_s390x.deb ... 220s Unpacking bash (5.2.21-2ubuntu3) over (5.2.21-2ubuntu2) ... 220s Setting up bash (5.2.21-2ubuntu3) ... 220s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 220s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 220s Preparing to unpack .../bsdutils_1%3a2.39.3-9ubuntu2_s390x.deb ... 220s Unpacking bsdutils (1:2.39.3-9ubuntu2) over (1:2.39.3-6ubuntu2) ... 221s Setting up bsdutils (1:2.39.3-9ubuntu2) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../0-libbrotli1_1.1.0-2build1_s390x.deb ... 221s Unpacking libbrotli1:s390x (1.1.0-2build1) over (1.1.0-2) ... 221s Preparing to unpack .../1-libgssapi-krb5-2_1.20.1-6ubuntu1_s390x.deb ... 221s Unpacking libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 221s Preparing to unpack .../2-libkrb5-3_1.20.1-6ubuntu1_s390x.deb ... 221s Unpacking libkrb5-3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 221s Preparing to unpack .../3-libkrb5support0_1.20.1-6ubuntu1_s390x.deb ... 221s Unpacking libkrb5support0:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 221s Preparing to unpack .../4-libk5crypto3_1.20.1-6ubuntu1_s390x.deb ... 221s Unpacking libk5crypto3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 221s Preparing to unpack .../5-libcom-err2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 221s Unpacking libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 221s Preparing to unpack .../6-zlib1g_1%3a1.3.dfsg-3.1ubuntu1_s390x.deb ... 221s Unpacking zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ... 221s Setting up zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2build6_s390x.deb ... 221s Unpacking librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) over (2.4+20151223.gitfa8646d.1-2build4) ... 221s Preparing to unpack .../udisks2_2.10.1-6_s390x.deb ... 221s Unpacking udisks2 (2.10.1-6) over (2.10.1-1ubuntu2) ... 221s Preparing to unpack .../libudisks2-0_2.10.1-6_s390x.deb ... 221s Unpacking libudisks2-0:s390x (2.10.1-6) over (2.10.1-1ubuntu2) ... 221s Preparing to unpack .../libblkid1_2.39.3-9ubuntu2_s390x.deb ... 221s Unpacking libblkid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 221s Setting up libblkid1:s390x (2.39.3-9ubuntu2) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../liblzma5_5.6.0-0.2_s390x.deb ... 221s Unpacking liblzma5:s390x (5.6.0-0.2) over (5.4.5-0.3) ... 221s Setting up liblzma5:s390x (5.6.0-0.2) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../0-kmod_31+20240202-2ubuntu4_s390x.deb ... 221s Unpacking kmod (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 221s Preparing to unpack .../1-libkmod2_31+20240202-2ubuntu4_s390x.deb ... 221s Unpacking libkmod2:s390x (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 221s Preparing to unpack .../2-systemd-dev_255.4-1ubuntu5_all.deb ... 221s Unpacking systemd-dev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 221s Preparing to unpack .../3-systemd-timesyncd_255.4-1ubuntu5_s390x.deb ... 221s Unpacking systemd-timesyncd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 221s Preparing to unpack .../4-dbus-session-bus-common_1.14.10-4ubuntu2_all.deb ... 221s Unpacking dbus-session-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 221s Preparing to unpack .../5-systemd-sysv_255.4-1ubuntu5_s390x.deb ... 221s Unpacking systemd-sysv (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 221s Preparing to unpack .../6-libpam-systemd_255.4-1ubuntu5_s390x.deb ... 221s Unpacking libpam-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 221s Preparing to unpack .../7-dbus-user-session_1.14.10-4ubuntu2_s390x.deb ... 221s Unpacking dbus-user-session (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 221s Preparing to unpack .../8-libapparmor1_4.0.0-beta3-0ubuntu2_s390x.deb ... 221s Unpacking libapparmor1:s390x (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 221s Preparing to unpack .../9-libaudit-common_1%3a3.1.2-2.1_all.deb ... 221s Unpacking libaudit-common (1:3.1.2-2.1) over (1:3.1.2-2) ... 221s Setting up libaudit-common (1:3.1.2-2.1) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../libcap-ng0_0.8.4-2build1_s390x.deb ... 221s Unpacking libcap-ng0:s390x (0.8.4-2build1) over (0.8.4-2) ... 221s Setting up libcap-ng0:s390x (0.8.4-2build1) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../libaudit1_1%3a3.1.2-2.1_s390x.deb ... 221s Unpacking libaudit1:s390x (1:3.1.2-2.1) over (1:3.1.2-2) ... 221s Setting up libaudit1:s390x (1:3.1.2-2.1) ... 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Preparing to unpack .../libselinux1_3.5-2ubuntu1_s390x.deb ... 221s Unpacking libselinux1:s390x (3.5-2ubuntu1) over (3.5-2build1) ... 221s Setting up libselinux1:s390x (3.5-2ubuntu1) ... 221s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 221s s390-tools depends on libcurl4 (>= 7.16.2). 221s curl depends on libcurl4 (= 8.5.0-2ubuntu2). 221s 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 221s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 221s Selecting previously unselected package libcurl4t64:s390x. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52161 files and directories currently installed.) 221s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu8_s390x.deb ... 221s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu8) ... 221s Preparing to unpack .../curl_8.5.0-2ubuntu8_s390x.deb ... 221s Unpacking curl (8.5.0-2ubuntu8) over (8.5.0-2ubuntu2) ... 221s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 221s wget depends on libpsl5 (>= 0.16.0). 221s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 221s 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 221s Removing libpsl5:s390x (0.21.2-1build1) ... 221s Selecting previously unselected package libpsl5t64:s390x. 221s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52162 files and directories currently installed.) 221s Preparing to unpack .../00-libpsl5t64_0.21.2-1.1_s390x.deb ... 221s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 221s Preparing to unpack .../01-wget_1.21.4-1ubuntu2_s390x.deb ... 221s Unpacking wget (1.21.4-1ubuntu2) over (1.21.4-1ubuntu1) ... 222s Preparing to unpack .../02-tnftp_20230507-2build1_s390x.deb ... 222s Unpacking tnftp (20230507-2build1) over (20230507-2) ... 222s Preparing to unpack .../03-tcpdump_4.99.4-3ubuntu2_s390x.deb ... 222s Unpacking tcpdump (4.99.4-3ubuntu2) over (4.99.4-3ubuntu1) ... 222s Preparing to unpack .../04-libsystemd-shared_255.4-1ubuntu5_s390x.deb ... 222s Unpacking libsystemd-shared:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 222s Preparing to unpack .../05-systemd-resolved_255.4-1ubuntu5_s390x.deb ... 222s Unpacking systemd-resolved (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 222s Preparing to unpack .../06-sudo_1.9.15p5-3ubuntu3_s390x.deb ... 222s Unpacking sudo (1.9.15p5-3ubuntu3) over (1.9.15p5-3ubuntu1) ... 222s Preparing to unpack .../07-rsync_3.2.7-1build1_s390x.deb ... 222s Unpacking rsync (3.2.7-1build1) over (3.2.7-1) ... 222s Preparing to unpack .../08-python3-cryptography_41.0.7-4build2_s390x.deb ... 222s Unpacking python3-cryptography (41.0.7-4build2) over (41.0.7-3) ... 222s Preparing to unpack .../09-openssl_3.0.13-0ubuntu2_s390x.deb ... 222s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 222s Preparing to unpack .../10-openssh-sftp-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 222s Unpacking openssh-sftp-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 222s Preparing to unpack .../11-openssh-client_1%3a9.6p1-3ubuntu11_s390x.deb ... 222s Unpacking openssh-client (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 222s Preparing to unpack .../12-openssh-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 222s Unpacking openssh-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 222s Preparing to unpack .../13-libssh-4_0.10.6-2build1_s390x.deb ... 222s Unpacking libssh-4:s390x (0.10.6-2build1) over (0.10.6-2) ... 222s Preparing to unpack .../14-libsasl2-modules_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 222s Unpacking libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 222s Preparing to unpack .../15-python3.12_3.12.2-4build3_s390x.deb ... 222s Unpacking python3.12 (3.12.2-4build3) over (3.12.2-1) ... 222s Preparing to unpack .../16-python3.12-minimal_3.12.2-4build3_s390x.deb ... 222s Unpacking python3.12-minimal (3.12.2-4build3) over (3.12.2-1) ... 222s Preparing to unpack .../17-libpython3.12-minimal_3.12.2-4build3_s390x.deb ... 222s Unpacking libpython3.12-minimal:s390x (3.12.2-4build3) over (3.12.2-1) ... 222s dpkg: libparted2:s390x: dependency problems, but removing anyway as you requested: 222s parted depends on libparted2 (= 3.6-3). 222s 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 222s Removing libparted2:s390x (3.6-3) ... 222s Selecting previously unselected package libparted2t64:s390x. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52162 files and directories currently installed.) 223s Preparing to unpack .../00-libparted2t64_3.6-3.1build2_s390x.deb ... 223s Unpacking libparted2t64:s390x (3.6-3.1build2) ... 223s Preparing to unpack .../01-parted_3.6-3.1build2_s390x.deb ... 223s Unpacking parted (3.6-3.1build2) over (3.6-3) ... 223s Preparing to unpack .../02-python3.11_3.11.8-1build4_s390x.deb ... 223s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ... 223s Preparing to unpack .../03-python3.11-minimal_3.11.8-1build4_s390x.deb ... 223s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ... 223s Preparing to unpack .../04-libpython3.11-minimal_3.11.8-1build4_s390x.deb ... 223s Unpacking libpython3.11-minimal:s390x (3.11.8-1build4) over (3.11.8-1) ... 223s Preparing to unpack .../05-libpython3.11-stdlib_3.11.8-1build4_s390x.deb ... 223s Unpacking libpython3.11-stdlib:s390x (3.11.8-1build4) over (3.11.8-1) ... 223s Preparing to unpack .../06-shared-mime-info_2.4-1build1_s390x.deb ... 223s Unpacking shared-mime-info (2.4-1build1) over (2.4-1) ... 223s Preparing to unpack .../07-gir1.2-girepository-2.0_1.79.1-1ubuntu6_s390x.deb ... 223s Unpacking gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 223s Preparing to unpack .../08-gir1.2-glib-2.0_2.79.3-3ubuntu5_s390x.deb ... 223s Unpacking gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 223s Preparing to unpack .../09-libgirepository-1.0-1_1.79.1-1ubuntu6_s390x.deb ... 223s Unpacking libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 223s Preparing to unpack .../10-python3-gi_3.47.0-3build1_s390x.deb ... 223s Unpacking python3-gi (3.47.0-3build1) over (3.47.0-3) ... 223s Preparing to unpack .../11-python3-dbus_1.3.2-5build2_s390x.deb ... 223s Unpacking python3-dbus (1.3.2-5build2) over (1.3.2-5build1) ... 223s Selecting previously unselected package libnetplan1:s390x. 223s Preparing to unpack .../12-libnetplan1_1.0-1_s390x.deb ... 223s Unpacking libnetplan1:s390x (1.0-1) ... 224s Preparing to unpack .../13-python3-netplan_1.0-1_s390x.deb ... 224s Unpacking python3-netplan (1.0-1) over (0.107.1-3) ... 224s Preparing to unpack .../14-netplan-generator_1.0-1_s390x.deb ... 224s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 224s Unpacking netplan-generator (1.0-1) over (0.107.1-3) ... 224s Preparing to unpack .../15-netplan.io_1.0-1_s390x.deb ... 224s Unpacking netplan.io (1.0-1) over (0.107.1-3) ... 224s Preparing to unpack .../16-libxmlb2_0.3.15-1build1_s390x.deb ... 224s Unpacking libxmlb2:s390x (0.3.15-1build1) over (0.3.15-1) ... 224s dpkg: libgpgme11:s390x: dependency problems, but removing anyway as you requested: 224s libvolume-key1:s390x depends on libgpgme11 (>= 1.4.1). 224s libjcat1:s390x depends on libgpgme11 (>= 1.2.0). 224s 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 224s Removing libgpgme11:s390x (1.18.0-4ubuntu1) ... 224s Selecting previously unselected package libgpgme11t64:s390x. 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52164 files and directories currently installed.) 224s Preparing to unpack .../00-libgpgme11t64_1.18.0-4.1ubuntu3_s390x.deb ... 224s Unpacking libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 224s Preparing to unpack .../01-libvolume-key1_0.3.12-7build1_s390x.deb ... 224s Unpacking libvolume-key1:s390x (0.3.12-7build1) over (0.3.12-5build2) ... 224s Preparing to unpack .../02-libqrtr-glib0_1.2.2-1ubuntu3_s390x.deb ... 224s Unpacking libqrtr-glib0:s390x (1.2.2-1ubuntu3) over (1.2.2-1ubuntu2) ... 224s Preparing to unpack .../03-libqmi-glib5_1.35.2-0ubuntu1_s390x.deb ... 224s Unpacking libqmi-glib5:s390x (1.35.2-0ubuntu1) over (1.34.0-2) ... 224s Preparing to unpack .../04-libqmi-proxy_1.35.2-0ubuntu1_s390x.deb ... 224s Unpacking libqmi-proxy (1.35.2-0ubuntu1) over (1.34.0-2) ... 224s Preparing to unpack .../05-libpolkit-agent-1-0_124-1ubuntu1_s390x.deb ... 224s Unpacking libpolkit-agent-1-0:s390x (124-1ubuntu1) over (124-1) ... 224s Preparing to unpack .../06-libpolkit-gobject-1-0_124-1ubuntu1_s390x.deb ... 224s Unpacking libpolkit-gobject-1-0:s390x (124-1ubuntu1) over (124-1) ... 224s Preparing to unpack .../07-libmm-glib0_1.23.4-0ubuntu1_s390x.deb ... 224s Unpacking libmm-glib0:s390x (1.23.4-0ubuntu1) over (1.22.0-3) ... 224s Preparing to unpack .../08-libmbim-glib4_1.31.2-0ubuntu2_s390x.deb ... 224s Unpacking libmbim-glib4:s390x (1.31.2-0ubuntu2) over (1.30.0-1) ... 224s Preparing to unpack .../09-libmbim-proxy_1.31.2-0ubuntu2_s390x.deb ... 224s Unpacking libmbim-proxy (1.31.2-0ubuntu2) over (1.30.0-1) ... 224s Preparing to unpack .../10-libjson-glib-1.0-common_1.8.0-2build1_all.deb ... 224s Unpacking libjson-glib-1.0-common (1.8.0-2build1) over (1.8.0-2) ... 224s Preparing to unpack .../11-libjson-glib-1.0-0_1.8.0-2build1_s390x.deb ... 224s Unpacking libjson-glib-1.0-0:s390x (1.8.0-2build1) over (1.8.0-2) ... 224s Preparing to unpack .../12-libgusb2_0.4.8-1build1_s390x.deb ... 224s Unpacking libgusb2:s390x (0.4.8-1build1) over (0.4.8-1) ... 224s Preparing to unpack .../13-libgudev-1.0-0_1%3a238-3ubuntu2_s390x.deb ... 224s Unpacking libgudev-1.0-0:s390x (1:238-3ubuntu2) over (1:238-3) ... 224s dpkg: libarchive13:s390x: dependency problems, but removing anyway as you requested: 224s fwupd depends on libarchive13 (>= 3.2.1). 224s 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 224s Removing libarchive13:s390x (3.7.2-1ubuntu2) ... 224s Selecting previously unselected package libarchive13t64:s390x. 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 224s Preparing to unpack .../libarchive13t64_3.7.2-1.1ubuntu2_s390x.deb ... 224s Unpacking libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 224s Preparing to unpack .../fwupd_1.9.15-2_s390x.deb ... 224s Unpacking fwupd (1.9.15-2) over (1.9.14-1) ... 224s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested: 224s libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0). 224s 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52172 files and directories currently installed.) 224s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... 224s Selecting previously unselected package libcurl3t64-gnutls:s390x. 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 224s Preparing to unpack .../0-libcurl3t64-gnutls_8.5.0-2ubuntu8_s390x.deb ... 224s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 224s Preparing to unpack .../1-libfwupd2_1.9.15-2_s390x.deb ... 224s Unpacking libfwupd2:s390x (1.9.15-2) over (1.9.14-1) ... 224s Preparing to unpack .../2-libblockdev3_3.1.0-1build1_s390x.deb ... 224s Unpacking libblockdev3:s390x (3.1.0-1build1) over (3.1.0-1) ... 224s Preparing to unpack .../3-libblockdev-utils3_3.1.0-1build1_s390x.deb ... 224s Unpacking libblockdev-utils3:s390x (3.1.0-1build1) over (3.1.0-1) ... 224s Preparing to unpack .../4-libblockdev-swap3_3.1.0-1build1_s390x.deb ... 224s Unpacking libblockdev-swap3:s390x (3.1.0-1build1) over (3.1.0-1) ... 224s Preparing to unpack .../5-libblockdev-part3_3.1.0-1build1_s390x.deb ... 224s Unpacking libblockdev-part3:s390x (3.1.0-1build1) over (3.1.0-1) ... 224s dpkg: libnvme1: dependency problems, but removing anyway as you requested: 224s libblockdev-nvme3:s390x depends on libnvme1 (>= 1.7.1). 224s 224s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52172 files and directories currently installed.) 224s Removing libnvme1 (1.8-2) ... 224s Selecting previously unselected package libnvme1t64. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52165 files and directories currently installed.) 225s Preparing to unpack .../0-libnvme1t64_1.8-3_s390x.deb ... 225s Unpacking libnvme1t64 (1.8-3) ... 225s Preparing to unpack .../1-libblockdev-nvme3_3.1.0-1build1_s390x.deb ... 225s Unpacking libblockdev-nvme3:s390x (3.1.0-1build1) over (3.1.0-1) ... 225s Preparing to unpack .../2-libblockdev-mdraid3_3.1.0-1build1_s390x.deb ... 225s Unpacking libblockdev-mdraid3:s390x (3.1.0-1build1) over (3.1.0-1) ... 225s Preparing to unpack .../3-libblockdev-loop3_3.1.0-1build1_s390x.deb ... 225s Unpacking libblockdev-loop3:s390x (3.1.0-1build1) over (3.1.0-1) ... 225s Preparing to unpack .../4-logsave_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 225s Unpacking logsave (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 225s Preparing to unpack .../5-e2fsprogs-l10n_1.47.0-2.4~exp1ubuntu2_all.deb ... 225s Unpacking e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 225s dpkg: libext2fs2:s390x: dependency problems, but removing anyway as you requested: 225s libblockdev-fs3:s390x depends on libext2fs2 (>= 1.42.11). 225s e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1). 225s btrfs-progs depends on libext2fs2 (>= 1.42). 225s 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 225s Removing libext2fs2:s390x (1.47.0-2ubuntu1) ... 225s Selecting previously unselected package libext2fs2t64:s390x. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 225s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 225s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2 to /lib/s390x-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' 225s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2.3 to /lib/s390x-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 225s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2 to /lib/s390x-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' 225s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2.4 to /lib/s390x-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 225s Unpacking libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 225s Setting up libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) ... 225s Setting up libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52182 files and directories currently installed.) 225s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 225s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 225s dpkg: libreiserfscore0: dependency problems, but removing anyway as you requested: 225s btrfs-progs depends on libreiserfscore0 (>= 1:3.6.27). 225s 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52182 files and directories currently installed.) 225s Removing libreiserfscore0 (1:3.6.27-7) ... 225s Selecting previously unselected package libreiserfscore0t64. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52177 files and directories currently installed.) 225s Preparing to unpack .../libreiserfscore0t64_1%3a3.6.27-7.1_s390x.deb ... 225s Unpacking libreiserfscore0t64 (1:3.6.27-7.1) ... 225s Preparing to unpack .../btrfs-progs_6.6.3-1.1build1_s390x.deb ... 225s Unpacking btrfs-progs (6.6.3-1.1build1) over (6.6.3-1.1) ... 225s Preparing to unpack .../libblockdev-fs3_3.1.0-1build1_s390x.deb ... 225s Unpacking libblockdev-fs3:s390x (3.1.0-1build1) over (3.1.0-1) ... 225s Preparing to unpack .../libblockdev-crypto3_3.1.0-1build1_s390x.deb ... 225s Unpacking libblockdev-crypto3:s390x (3.1.0-1build1) over (3.1.0-1) ... 225s Preparing to unpack .../bolt_0.9.6-2build1_s390x.deb ... 225s Unpacking bolt (0.9.6-2build1) over (0.9.6-2) ... 225s dpkg: libglib2.0-0:s390x: dependency problems, but removing anyway as you requested: 225s s390-tools depends on libglib2.0-0 (>= 2.77.0). 225s libnetplan0:s390x depends on libglib2.0-0 (>= 2.75.3). 225s libjcat1:s390x depends on libglib2.0-0 (>= 2.75.3). 225s 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52183 files and directories currently installed.) 225s Removing libglib2.0-0:s390x (2.79.2-1~ubuntu1) ... 225s Selecting previously unselected package libglib2.0-0t64:s390x. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52158 files and directories currently installed.) 225s Preparing to unpack .../0-libglib2.0-0t64_2.79.3-3ubuntu5_s390x.deb ... 225s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:s390x.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 225s removed '/var/lib/dpkg/info/libglib2.0-0:s390x.postrm' 225s Unpacking libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 225s Preparing to unpack .../1-libjcat1_0.2.0-2build2_s390x.deb ... 225s Unpacking libjcat1:s390x (0.2.0-2build2) over (0.2.0-2) ... 225s Preparing to unpack .../2-libldap2_2.6.7+dfsg-1~exp1ubuntu6_s390x.deb ... 225s Unpacking libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 225s Preparing to unpack .../3-ubuntu-pro-client-l10n_31.2.2_s390x.deb ... 225s Unpacking ubuntu-pro-client-l10n (31.2.2) over (31.1) ... 225s Preparing to unpack .../4-ubuntu-pro-client_31.2.2_s390x.deb ... 225s Unpacking ubuntu-pro-client (31.2.2) over (31.1) ... 225s Preparing to unpack .../5-gnupg-utils_2.4.4-2ubuntu15_s390x.deb ... 225s Unpacking gnupg-utils (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 225s Preparing to unpack .../6-keyboxd_2.4.4-2ubuntu15_s390x.deb ... 225s Unpacking keyboxd (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 225s dpkg: libnpth0:s390x: dependency problems, but removing anyway as you requested: 225s gpgv depends on libnpth0 (>= 0.90). 225s gpgsm depends on libnpth0 (>= 0.90). 225s gpg-agent depends on libnpth0 (>= 0.90). 225s gpg depends on libnpth0 (>= 0.90). 225s dirmngr depends on libnpth0 (>= 0.90). 225s 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52183 files and directories currently installed.) 225s Removing libnpth0:s390x (1.6-3build2) ... 225s Selecting previously unselected package libnpth0t64:s390x. 225s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52178 files and directories currently installed.) 225s Preparing to unpack .../libnpth0t64_1.6-3.1_s390x.deb ... 225s Unpacking libnpth0t64:s390x (1.6-3.1) ... 226s Setting up libnpth0t64:s390x (1.6-3.1) ... 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 226s Preparing to unpack .../gpgv_2.4.4-2ubuntu15_s390x.deb ... 226s Unpacking gpgv (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Setting up gpgv (2.4.4-2ubuntu15) ... 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 226s Preparing to unpack .../0-gpg-wks-client_2.4.4-2ubuntu15_s390x.deb ... 226s Unpacking gpg-wks-client (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Preparing to unpack .../1-gpg-agent_2.4.4-2ubuntu15_s390x.deb ... 226s Unpacking gpg-agent (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Preparing to unpack .../2-gpg_2.4.4-2ubuntu15_s390x.deb ... 226s Unpacking gpg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Preparing to unpack .../3-dirmngr_2.4.4-2ubuntu15_s390x.deb ... 226s Unpacking dirmngr (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Preparing to unpack .../4-gnupg_2.4.4-2ubuntu15_all.deb ... 226s Unpacking gnupg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 226s Preparing to unpack .../5-python3-apt_2.7.7_s390x.deb ... 226s Unpacking python3-apt (2.7.7) over (2.7.6) ... 226s Preparing to unpack .../6-apt-utils_2.7.14_s390x.deb ... 226s Unpacking apt-utils (2.7.14) over (2.7.12) ... 226s dpkg: libapt-pkg6.0:s390x: dependency problems, but removing anyway as you requested: 226s apt depends on libapt-pkg6.0 (>= 2.7.12). 226s 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52182 files and directories currently installed.) 226s Removing libapt-pkg6.0:s390x (2.7.12) ... 226s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested: 226s libhogweed6:s390x depends on libnettle8. 226s libgnutls30:s390x depends on libnettle8 (>= 3.9~). 226s 226s Removing libnettle8:s390x (3.9.1-2) ... 226s Selecting previously unselected package libapt-pkg6.0t64:s390x. 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52126 files and directories currently installed.) 226s Preparing to unpack .../libapt-pkg6.0t64_2.7.14_s390x.deb ... 226s Unpacking libapt-pkg6.0t64:s390x (2.7.14) ... 226s Setting up libapt-pkg6.0t64:s390x (2.7.14) ... 226s Selecting previously unselected package libnettle8t64:s390x. 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52176 files and directories currently installed.) 226s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ... 226s Unpacking libnettle8t64:s390x (3.9.1-2.2) ... 226s Setting up libnettle8t64:s390x (3.9.1-2.2) ... 226s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested: 226s libgnutls30:s390x depends on libhogweed6 (>= 3.6). 226s 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 226s Removing libhogweed6:s390x (3.9.1-2) ... 226s Selecting previously unselected package libhogweed6t64:s390x. 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52179 files and directories currently installed.) 226s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ... 226s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ... 226s Setting up libhogweed6t64:s390x (3.9.1-2.2) ... 226s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested: 226s apt depends on libgnutls30 (>= 3.8.1). 226s 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52185 files and directories currently installed.) 226s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ... 226s Selecting previously unselected package libgnutls30t64:s390x. 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52176 files and directories currently installed.) 226s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ... 226s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 226s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 226s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 226s Preparing to unpack .../archives/apt_2.7.14_s390x.deb ... 226s Unpacking apt (2.7.14) over (2.7.12) ... 226s Setting up apt (2.7.14) ... 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 227s Preparing to unpack .../gpgconf_2.4.4-2ubuntu15_s390x.deb ... 227s Unpacking gpgconf (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 227s Preparing to unpack .../gpgsm_2.4.4-2ubuntu15_s390x.deb ... 227s Unpacking gpgsm (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 227s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested: 227s libpython3.12-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 227s gawk depends on libreadline8 (>= 6.0). 227s fdisk depends on libreadline8 (>= 6.0). 227s 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 227s Removing libreadline8:s390x (8.2-3) ... 227s Selecting previously unselected package libreadline8t64:s390x. 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52192 files and directories currently installed.) 227s Preparing to unpack .../libreadline8t64_8.2-4_s390x.deb ... 227s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 227s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 227s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 227s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 227s Unpacking libreadline8t64:s390x (8.2-4) ... 227s Setting up libreadline8t64:s390x (8.2-4) ... 227s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 227s Preparing to unpack .../gawk_1%3a5.2.1-2build2_s390x.deb ... 227s Unpacking gawk (1:5.2.1-2build2) over (1:5.2.1-2) ... 227s Preparing to unpack .../fdisk_2.39.3-9ubuntu2_s390x.deb ... 227s Unpacking fdisk (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 227s Preparing to unpack .../libpython3.12-stdlib_3.12.2-4build3_s390x.deb ... 227s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build3) over (3.12.2-1) ... 227s Preparing to unpack .../perl-base_5.38.2-3.2_s390x.deb ... 227s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ... 228s Setting up perl-base (5.38.2-3.2) ... 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52210 files and directories currently installed.) 228s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2_all.deb ... 228s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ... 228s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_s390x.deb ... 228s Unpacking python3-gdbm:s390x (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 228s Preparing to unpack .../man-db_2.12.0-3build4_s390x.deb ... 228s Unpacking man-db (2.12.0-3build4) over (2.12.0-3) ... 228s dpkg: libgdbm-compat4:s390x: dependency problems, but removing anyway as you requested: 228s libperl5.38:s390x depends on libgdbm-compat4 (>= 1.18-3). 228s 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52210 files and directories currently installed.) 228s Removing libgdbm-compat4:s390x (1.23-5) ... 228s dpkg: libgdbm6:s390x: dependency problems, but removing anyway as you requested: 228s libperl5.38:s390x depends on libgdbm6 (>= 1.21). 228s 228s Removing libgdbm6:s390x (1.23-5) ... 228s Selecting previously unselected package libgdbm6t64:s390x. 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52200 files and directories currently installed.) 228s Preparing to unpack .../libgdbm6t64_1.23-5.1_s390x.deb ... 228s Unpacking libgdbm6t64:s390x (1.23-5.1) ... 228s Selecting previously unselected package libgdbm-compat4t64:s390x. 228s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_s390x.deb ... 228s Unpacking libgdbm-compat4t64:s390x (1.23-5.1) ... 228s dpkg: libperl5.38:s390x: dependency problems, but removing anyway as you requested: 228s perl depends on libperl5.38 (= 5.38.2-3). 228s 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 228s Removing libperl5.38:s390x (5.38.2-3) ... 228s Selecting previously unselected package libperl5.38t64:s390x. 228s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51690 files and directories currently installed.) 228s Preparing to unpack .../libperl5.38t64_5.38.2-3.2_s390x.deb ... 228s Unpacking libperl5.38t64:s390x (5.38.2-3.2) ... 229s Preparing to unpack .../perl_5.38.2-3.2_s390x.deb ... 229s Unpacking perl (5.38.2-3.2) over (5.38.2-3) ... 229s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested: 229s libsasl2-modules-db:s390x depends on libdb5.3. 229s iproute2 depends on libdb5.3. 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 229s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ... 229s Selecting previously unselected package libdb5.3t64:s390x. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 229s Preparing to unpack .../0-libdb5.3t64_5.3.28+dfsg2-6_s390x.deb ... 229s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 229s Preparing to unpack .../1-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 229s Unpacking libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 229s Preparing to unpack .../2-libsasl2-2_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 229s Unpacking libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 229s Preparing to unpack .../3-libfido2-1_1.14.0-1build1_s390x.deb ... 229s Unpacking libfido2-1:s390x (1.14.0-1build1) over (1.14.0-1) ... 229s Preparing to unpack .../4-libcryptsetup12_2%3a2.7.0-1ubuntu2_s390x.deb ... 229s Unpacking libcryptsetup12:s390x (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 229s Preparing to unpack .../5-dhcpcd-base_1%3a10.0.6-1ubuntu2_s390x.deb ... 229s Unpacking dhcpcd-base (1:10.0.6-1ubuntu2) over (1:10.0.6-1ubuntu1) ... 229s dpkg: libuv1:s390x: dependency problems, but removing anyway as you requested: 229s bind9-libs:s390x depends on libuv1 (>= 1.40.0). 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 229s Removing libuv1:s390x (1.48.0-1) ... 229s Selecting previously unselected package libuv1t64:s390x. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52207 files and directories currently installed.) 229s Preparing to unpack .../libuv1t64_1.48.0-1.1_s390x.deb ... 229s Unpacking libuv1t64:s390x (1.48.0-1.1) ... 229s Preparing to unpack .../bind9-host_1%3a9.18.24-0ubuntu3_s390x.deb ... 229s Unpacking bind9-host (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 229s Preparing to unpack .../bind9-dnsutils_1%3a9.18.24-0ubuntu3_s390x.deb ... 229s Unpacking bind9-dnsutils (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 229s Preparing to unpack .../bind9-libs_1%3a9.18.24-0ubuntu3_s390x.deb ... 229s Unpacking bind9-libs:s390x (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 229s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 229s systemd depends on libssl3 (>= 3.0.0). 229s s390-tools depends on libssl3 (>= 3.0.0). 229s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 229s 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52213 files and directories currently installed.) 229s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 229s Selecting previously unselected package libssl3t64:s390x. 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 229s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 229s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 229s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 229s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 229s Preparing to unpack .../libnss-systemd_255.4-1ubuntu5_s390x.deb ... 229s Unpacking libnss-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 229s Preparing to unpack .../libudev1_255.4-1ubuntu5_s390x.deb ... 229s Unpacking libudev1:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 229s Setting up libudev1:s390x (255.4-1ubuntu5) ... 229s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 230s Preparing to unpack .../0-dbus-system-bus-common_1.14.10-4ubuntu2_all.deb ... 230s Unpacking dbus-system-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 230s Preparing to unpack .../1-dbus-bin_1.14.10-4ubuntu2_s390x.deb ... 230s Unpacking dbus-bin (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 230s Preparing to unpack .../2-dbus_1.14.10-4ubuntu2_s390x.deb ... 230s Unpacking dbus (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 230s Preparing to unpack .../3-dbus-daemon_1.14.10-4ubuntu2_s390x.deb ... 230s Unpacking dbus-daemon (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 230s Preparing to unpack .../4-libdbus-1-3_1.14.10-4ubuntu2_s390x.deb ... 230s Unpacking libdbus-1-3:s390x (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 230s Preparing to unpack .../5-libmount1_2.39.3-9ubuntu2_s390x.deb ... 230s Unpacking libmount1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 230s Setting up libmount1:s390x (2.39.3-9ubuntu2) ... 230s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 230s Preparing to unpack .../libuuid1_2.39.3-9ubuntu2_s390x.deb ... 230s Unpacking libuuid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 230s Setting up libuuid1:s390x (2.39.3-9ubuntu2) ... 230s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 230s Preparing to unpack .../libfdisk1_2.39.3-9ubuntu2_s390x.deb ... 230s Unpacking libfdisk1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 230s Preparing to unpack .../mount_2.39.3-9ubuntu2_s390x.deb ... 230s Unpacking mount (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 230s Preparing to unpack .../libsqlite3-0_3.45.1-1ubuntu1_s390x.deb ... 230s Unpacking libsqlite3-0:s390x (3.45.1-1ubuntu1) over (3.45.1-1) ... 230s Preparing to unpack .../dpkg_1.22.6ubuntu5_s390x.deb ... 230s Unpacking dpkg (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 230s Setting up dpkg (1.22.6ubuntu5) ... 231s Setting up libpython3.12-minimal:s390x (3.12.2-4build3) ... 231s Setting up python3.12-minimal (3.12.2-4build3) ... 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 232s Preparing to unpack .../python3-minimal_3.12.2-0ubuntu1_s390x.deb ... 232s Unpacking python3-minimal (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 232s Setting up python3-minimal (3.12.2-0ubuntu1) ... 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 232s Preparing to unpack .../python3_3.12.2-0ubuntu1_s390x.deb ... 232s Unpacking python3 (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 232s Preparing to unpack .../libpython3-stdlib_3.12.2-0ubuntu1_s390x.deb ... 232s Unpacking libpython3-stdlib:s390x (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 232s Preparing to unpack .../libsmartcols1_2.39.3-9ubuntu2_s390x.deb ... 232s Unpacking libsmartcols1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 232s Setting up libsmartcols1:s390x (2.39.3-9ubuntu2) ... 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 232s Preparing to unpack .../0-bsdextrautils_2.39.3-9ubuntu2_s390x.deb ... 232s Unpacking bsdextrautils (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 232s Preparing to unpack .../1-groff-base_1.23.0-3build1_s390x.deb ... 232s Unpacking groff-base (1.23.0-3build1) over (1.23.0-3) ... 232s Preparing to unpack .../2-pinentry-curses_1.2.1-3ubuntu4_s390x.deb ... 232s Unpacking pinentry-curses (1.2.1-3ubuntu4) over (1.2.1-3ubuntu1) ... 232s Preparing to unpack .../3-readline-common_8.2-4_all.deb ... 232s Unpacking readline-common (8.2-4) over (8.2-3) ... 232s Preparing to unpack .../4-libxml2_2.9.14+dfsg-1.3ubuntu2_s390x.deb ... 232s Unpacking libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) over (2.9.14+dfsg-1.3ubuntu1) ... 232s Preparing to unpack .../5-libbpf1_1%3a1.3.0-2build1_s390x.deb ... 232s Unpacking libbpf1:s390x (1:1.3.0-2build1) over (1:1.3.0-2) ... 232s dpkg: libelf1:s390x: dependency problems, but removing anyway as you requested: 232s linux-headers-6.8.0-11-generic depends on libelf1 (>= 0.144). 232s iproute2 depends on libelf1 (>= 0.131). 232s 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 232s Removing libelf1:s390x (0.190-1) ... 232s Selecting previously unselected package libelf1t64:s390x. 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52210 files and directories currently installed.) 232s Preparing to unpack .../libelf1t64_0.190-1.1build2_s390x.deb ... 232s Unpacking libelf1t64:s390x (0.190-1.1build2) ... 232s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ... 232s Unpacking libtirpc-common (1.3.4+ds-1.1) over (1.3.4+ds-1build1) ... 232s Preparing to unpack .../lsof_4.95.0-1build2_s390x.deb ... 232s Unpacking lsof (4.95.0-1build2) over (4.95.0-1build1) ... 232s Preparing to unpack .../libnsl2_1.3.0-3build2_s390x.deb ... 232s Unpacking libnsl2:s390x (1.3.0-3build2) over (1.3.0-3) ... 232s dpkg: libtirpc3:s390x: dependency problems, but removing anyway as you requested: 232s iproute2 depends on libtirpc3 (>= 1.0.2). 232s 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 232s Removing libtirpc3:s390x (1.3.4+ds-1build1) ... 232s Selecting previously unselected package libtirpc3t64:s390x. 232s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52209 files and directories currently installed.) 232s Preparing to unpack .../0-libtirpc3t64_1.3.4+ds-1.1_s390x.deb ... 232s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3 to /lib/s390x-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 232s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3.0.0 to /lib/s390x-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 232s Unpacking libtirpc3t64:s390x (1.3.4+ds-1.1) ... 232s Preparing to unpack .../1-iproute2_6.1.0-1ubuntu5_s390x.deb ... 232s Unpacking iproute2 (6.1.0-1ubuntu5) over (6.1.0-1ubuntu2) ... 232s Preparing to unpack .../2-libprotobuf-c1_1.4.1-1ubuntu3_s390x.deb ... 232s Unpacking libprotobuf-c1:s390x (1.4.1-1ubuntu3) over (1.4.1-1ubuntu2) ... 232s Preparing to unpack .../3-libnghttp2-14_1.59.0-1build1_s390x.deb ... 232s Unpacking libnghttp2-14:s390x (1.59.0-1build1) over (1.59.0-1) ... 232s Preparing to unpack .../4-libproc2-0_2%3a4.0.4-4ubuntu2_s390x.deb ... 232s Unpacking libproc2-0:s390x (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 232s Preparing to unpack .../5-procps_2%3a4.0.4-4ubuntu2_s390x.deb ... 232s Unpacking procps (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 233s Preparing to unpack .../6-coreutils_9.4-3ubuntu3_s390x.deb ... 233s Unpacking coreutils (9.4-3ubuntu3) over (9.4-2ubuntu4) ... 233s Setting up coreutils (9.4-3ubuntu3) ... 233s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52221 files and directories currently installed.) 233s Preparing to unpack .../util-linux_2.39.3-9ubuntu2_s390x.deb ... 233s Unpacking util-linux (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 233s Setting up util-linux (2.39.3-9ubuntu2) ... 233s fstrim.service is a disabled or a static unit not running, not starting it. 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52221 files and directories currently installed.) 234s Removing libatm1:s390x (1:2.5.1-5) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52216 files and directories currently installed.) 234s Preparing to unpack .../file_1%3a5.45-3_s390x.deb ... 234s Unpacking file (1:5.45-3) over (1:5.45-2) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52216 files and directories currently installed.) 234s Removing libmagic1:s390x (1:5.45-2) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 234s Preparing to unpack .../libmagic-mgc_1%3a5.45-3_s390x.deb ... 234s Unpacking libmagic-mgc (1:5.45-3) over (1:5.45-2) ... 234s Selecting previously unselected package libmagic1t64:s390x. 234s Preparing to unpack .../libmagic1t64_1%3a5.45-3_s390x.deb ... 234s Unpacking libmagic1t64:s390x (1:5.45-3) ... 234s Preparing to unpack .../libplymouth5_24.004.60-1ubuntu6_s390x.deb ... 234s Unpacking libplymouth5:s390x (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 234s Removing libpng16-16:s390x (1.6.43-1) ... 234s Selecting previously unselected package libpng16-16t64:s390x. 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52207 files and directories currently installed.) 234s Preparing to unpack .../libpng16-16t64_1.6.43-3_s390x.deb ... 234s Unpacking libpng16-16t64:s390x (1.6.43-3) ... 234s Preparing to unpack .../multipath-tools_0.9.4-5ubuntu6_s390x.deb ... 234s Unpacking multipath-tools (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 234s dpkg: liburcu8:s390x: dependency problems, but removing anyway as you requested: 234s xfsprogs depends on liburcu8 (>= 0.13.0). 234s 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 234s Removing liburcu8:s390x (0.14.0-3) ... 234s Selecting previously unselected package liburcu8t64:s390x. 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52198 files and directories currently installed.) 234s Preparing to unpack .../liburcu8t64_0.14.0-3.1_s390x.deb ... 234s Unpacking liburcu8t64:s390x (0.14.0-3.1) ... 234s Preparing to unpack .../liblocale-gettext-perl_1.07-6ubuntu4_s390x.deb ... 234s Unpacking liblocale-gettext-perl (1.07-6ubuntu4) over (1.07-6build1) ... 234s Preparing to unpack .../uuid-runtime_2.39.3-9ubuntu2_s390x.deb ... 234s Unpacking uuid-runtime (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 234s Preparing to unpack .../libdebconfclient0_0.271ubuntu2_s390x.deb ... 234s Unpacking libdebconfclient0:s390x (0.271ubuntu2) over (0.271ubuntu1) ... 234s Setting up libdebconfclient0:s390x (0.271ubuntu2) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52218 files and directories currently installed.) 234s Preparing to unpack .../libsemanage-common_3.5-1build4_all.deb ... 234s Unpacking libsemanage-common (3.5-1build4) over (3.5-1build2) ... 234s Setting up libsemanage-common (3.5-1build4) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52218 files and directories currently installed.) 234s Preparing to unpack .../libsemanage2_3.5-1build4_s390x.deb ... 234s Unpacking libsemanage2:s390x (3.5-1build4) over (3.5-1build2) ... 234s Setting up libsemanage2:s390x (3.5-1build4) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52218 files and directories currently installed.) 234s Preparing to unpack .../install-info_7.1-3build1_s390x.deb ... 234s Unpacking install-info (7.1-3build1) over (7.1-3) ... 234s Setting up install-info (7.1-3build1) ... 234s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52218 files and directories currently installed.) 234s Preparing to unpack .../00-libss2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 234s Unpacking libss2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 234s Preparing to unpack .../01-eject_2.39.3-9ubuntu2_s390x.deb ... 234s Unpacking eject (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 234s Preparing to unpack .../02-krb5-locales_1.20.1-6ubuntu1_all.deb ... 234s Unpacking krb5-locales (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 234s Preparing to unpack .../03-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 234s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 234s Preparing to unpack .../04-libslang2_2.3.3-3build1_s390x.deb ... 234s Unpacking libslang2:s390x (2.3.3-3build1) over (2.3.3-3) ... 234s Preparing to unpack .../05-libtext-charwidth-perl_0.04-11build2_s390x.deb ... 234s Unpacking libtext-charwidth-perl:s390x (0.04-11build2) over (0.04-11build1) ... 234s Preparing to unpack .../06-libtext-iconv-perl_1.7-8build2_s390x.deb ... 234s Unpacking libtext-iconv-perl:s390x (1.7-8build2) over (1.7-8build1) ... 234s Preparing to unpack .../07-python-apt-common_2.7.7_all.deb ... 234s Unpacking python-apt-common (2.7.7) over (2.7.6) ... 234s Preparing to unpack .../08-python3-setuptools_68.1.2-2ubuntu1_all.deb ... 235s Unpacking python3-setuptools (68.1.2-2ubuntu1) over (68.1.2-2) ... 235s Preparing to unpack .../09-python3-pkg-resources_68.1.2-2ubuntu1_all.deb ... 235s Unpacking python3-pkg-resources (68.1.2-2ubuntu1) over (68.1.2-2) ... 235s Preparing to unpack .../10-rsyslog_8.2312.0-3ubuntu7_s390x.deb ... 235s Unpacking rsyslog (8.2312.0-3ubuntu7) over (8.2312.0-3ubuntu3) ... 235s Preparing to unpack .../11-vim-tiny_2%3a9.1.0016-1ubuntu6_s390x.deb ... 235s Unpacking vim-tiny (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 235s Preparing to unpack .../12-vim-common_2%3a9.1.0016-1ubuntu6_all.deb ... 235s Unpacking vim-common (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 235s Selecting previously unselected package xdg-user-dirs. 235s Preparing to unpack .../13-xdg-user-dirs_0.18-1_s390x.deb ... 235s Unpacking xdg-user-dirs (0.18-1) ... 235s Preparing to unpack .../14-xxd_2%3a9.1.0016-1ubuntu6_s390x.deb ... 235s Unpacking xxd (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 235s Preparing to unpack .../15-apparmor_4.0.0-beta3-0ubuntu2_s390x.deb ... 235s Unpacking apparmor (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 236s Preparing to unpack .../16-ftp_20230507-2build1_all.deb ... 236s Unpacking ftp (20230507-2build1) over (20230507-2) ... 236s Preparing to unpack .../17-inetutils-telnet_2%3a2.5-3ubuntu3_s390x.deb ... 236s Unpacking inetutils-telnet (2:2.5-3ubuntu3) over (2:2.5-3ubuntu1) ... 236s Preparing to unpack .../18-info_7.1-3build1_s390x.deb ... 236s Unpacking info (7.1-3build1) over (7.1-3) ... 236s Preparing to unpack .../19-libxmuu1_2%3a1.1.3-3build1_s390x.deb ... 236s Unpacking libxmuu1:s390x (2:1.1.3-3build1) over (2:1.1.3-3) ... 236s Preparing to unpack .../20-lshw_02.19.git.2021.06.19.996aaad9c7-2build2_s390x.deb ... 236s Unpacking lshw (02.19.git.2021.06.19.996aaad9c7-2build2) over (02.19.git.2021.06.19.996aaad9c7-2build1) ... 236s Selecting previously unselected package manpages. 236s Preparing to unpack .../21-manpages_6.05.01-1_all.deb ... 236s Unpacking manpages (6.05.01-1) ... 236s Preparing to unpack .../22-mtr-tiny_0.95-1.1build1_s390x.deb ... 236s Unpacking mtr-tiny (0.95-1.1build1) over (0.95-1.1) ... 236s Preparing to unpack .../23-plymouth-theme-ubuntu-text_24.004.60-1ubuntu6_s390x.deb ... 236s Unpacking plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 236s Preparing to unpack .../24-plymouth_24.004.60-1ubuntu6_s390x.deb ... 236s Unpacking plymouth (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 236s Preparing to unpack .../25-telnet_0.17+2.5-3ubuntu3_all.deb ... 236s Unpacking telnet (0.17+2.5-3ubuntu3) over (0.17+2.5-3ubuntu1) ... 236s Preparing to unpack .../26-usb.ids_2024.03.18-1_all.deb ... 236s Unpacking usb.ids (2024.03.18-1) over (2024.01.30-1) ... 236s Preparing to unpack .../27-xz-utils_5.6.0-0.2_s390x.deb ... 236s Unpacking xz-utils (5.6.0-0.2) over (5.4.5-0.3) ... 236s Selecting previously unselected package libllvm18:s390x. 236s Preparing to unpack .../28-libllvm18_1%3a18.1.2-1ubuntu2_s390x.deb ... 236s Unpacking libllvm18:s390x (1:18.1.2-1ubuntu2) ... 237s Selecting previously unselected package libclang-cpp18. 237s Preparing to unpack .../29-libclang-cpp18_1%3a18.1.2-1ubuntu2_s390x.deb ... 237s Unpacking libclang-cpp18 (1:18.1.2-1ubuntu2) ... 238s Selecting previously unselected package libbpfcc:s390x. 238s Preparing to unpack .../30-libbpfcc_0.29.1+ds-1ubuntu4_s390x.deb ... 238s Unpacking libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 238s Selecting previously unselected package python3-bpfcc. 238s Preparing to unpack .../31-python3-bpfcc_0.29.1+ds-1ubuntu4_all.deb ... 238s Unpacking python3-bpfcc (0.29.1+ds-1ubuntu4) ... 238s Selecting previously unselected package ieee-data. 238s Preparing to unpack .../32-ieee-data_20220827.1_all.deb ... 238s Unpacking ieee-data (20220827.1) ... 238s Selecting previously unselected package python3-netaddr. 238s Preparing to unpack .../33-python3-netaddr_0.8.0-2ubuntu1_all.deb ... 238s Unpacking python3-netaddr (0.8.0-2ubuntu1) ... 238s Selecting previously unselected package bpfcc-tools. 238s Preparing to unpack .../34-bpfcc-tools_0.29.1+ds-1ubuntu4_all.deb ... 238s Unpacking bpfcc-tools (0.29.1+ds-1ubuntu4) ... 238s Selecting previously unselected package libclang1-18. 238s Preparing to unpack .../35-libclang1-18_1%3a18.1.2-1ubuntu2_s390x.deb ... 238s Unpacking libclang1-18 (1:18.1.2-1ubuntu2) ... 238s Selecting previously unselected package libdw1t64:s390x. 238s Preparing to unpack .../36-libdw1t64_0.190-1.1build2_s390x.deb ... 238s Unpacking libdw1t64:s390x (0.190-1.1build2) ... 238s Selecting previously unselected package bpftrace. 238s Preparing to unpack .../37-bpftrace_0.20.2-1ubuntu1_s390x.deb ... 238s Unpacking bpftrace (0.20.2-1ubuntu1) ... 238s Preparing to unpack .../38-cryptsetup-bin_2%3a2.7.0-1ubuntu2_s390x.deb ... 238s Unpacking cryptsetup-bin (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 238s Preparing to unpack .../39-dpkg-dev_1.22.6ubuntu5_all.deb ... 238s Unpacking dpkg-dev (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 238s Preparing to unpack .../40-libdpkg-perl_1.22.6ubuntu5_all.deb ... 238s Unpacking libdpkg-perl (1.22.6ubuntu5) over (1.22.4ubuntu5) ... 238s Selecting previously unselected package fonts-dejavu-mono. 238s Preparing to unpack .../41-fonts-dejavu-mono_2.37-8_all.deb ... 238s Unpacking fonts-dejavu-mono (2.37-8) ... 238s Selecting previously unselected package fonts-dejavu-core. 238s Preparing to unpack .../42-fonts-dejavu-core_2.37-8_all.deb ... 238s Unpacking fonts-dejavu-core (2.37-8) ... 239s Selecting previously unselected package fontconfig-config. 239s Preparing to unpack .../43-fontconfig-config_2.15.0-1.1ubuntu1_s390x.deb ... 239s Unpacking fontconfig-config (2.15.0-1.1ubuntu1) ... 239s Preparing to unpack .../44-gnupg-l10n_2.4.4-2ubuntu15_all.deb ... 239s Unpacking gnupg-l10n (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 239s Selecting previously unselected package hwdata. 239s Preparing to unpack .../45-hwdata_0.379-1_all.deb ... 239s Unpacking hwdata (0.379-1) ... 239s Preparing to unpack .../46-libibverbs1_50.0-2build1_s390x.deb ... 239s Unpacking libibverbs1:s390x (50.0-2build1) over (50.0-2) ... 239s Preparing to unpack .../47-ibverbs-providers_50.0-2build1_s390x.deb ... 239s Unpacking ibverbs-providers:s390x (50.0-2build1) over (50.0-2) ... 239s Selecting previously unselected package libaio1t64:s390x. 239s Preparing to unpack .../48-libaio1t64_0.3.113-6_s390x.deb ... 239s Unpacking libaio1t64:s390x (0.3.113-6) ... 239s Selecting previously unselected package libatm1t64:s390x. 239s Preparing to unpack .../49-libatm1t64_1%3a2.5.1-5.1_s390x.deb ... 239s Unpacking libatm1t64:s390x (1:2.5.1-5.1) ... 239s Selecting previously unselected package libc-dev-bin. 239s Preparing to unpack .../50-libc-dev-bin_2.39-0ubuntu6_s390x.deb ... 239s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 239s Selecting previously unselected package libfreetype6:s390x. 239s Preparing to unpack .../51-libfreetype6_2.13.2+dfsg-1build2_s390x.deb ... 239s Unpacking libfreetype6:s390x (2.13.2+dfsg-1build2) ... 239s Selecting previously unselected package libfontconfig1:s390x. 239s Preparing to unpack .../52-libfontconfig1_2.15.0-1.1ubuntu1_s390x.deb ... 239s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 239s Selecting previously unselected package libjpeg-turbo8:s390x. 239s Preparing to unpack .../53-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 239s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 239s Selecting previously unselected package libjpeg8:s390x. 239s Preparing to unpack .../54-libjpeg8_8c-2ubuntu11_s390x.deb ... 239s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 239s Selecting previously unselected package libdeflate0:s390x. 239s Preparing to unpack .../55-libdeflate0_1.19-1_s390x.deb ... 239s Unpacking libdeflate0:s390x (1.19-1) ... 239s Selecting previously unselected package libjbig0:s390x. 239s Preparing to unpack .../56-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 239s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 239s Selecting previously unselected package libsharpyuv0:s390x. 239s Preparing to unpack .../57-libsharpyuv0_1.3.2-0.4build2_s390x.deb ... 239s Unpacking libsharpyuv0:s390x (1.3.2-0.4build2) ... 239s Selecting previously unselected package libwebp7:s390x. 239s Preparing to unpack .../58-libwebp7_1.3.2-0.4build2_s390x.deb ... 239s Unpacking libwebp7:s390x (1.3.2-0.4build2) ... 239s Selecting previously unselected package libtiff6:s390x. 239s Preparing to unpack .../59-libtiff6_4.5.1+git230720-4ubuntu1_s390x.deb ... 239s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 239s Selecting previously unselected package libxpm4:s390x. 239s Preparing to unpack .../60-libxpm4_1%3a3.5.17-1build1_s390x.deb ... 239s Unpacking libxpm4:s390x (1:3.5.17-1build1) ... 239s Selecting previously unselected package libgd3:s390x. 239s Preparing to unpack .../61-libgd3_2.3.3-9ubuntu3_s390x.deb ... 239s Unpacking libgd3:s390x (2.3.3-9ubuntu3) ... 239s Selecting previously unselected package libc-devtools. 239s Preparing to unpack .../62-libc-devtools_2.39-0ubuntu6_s390x.deb ... 239s Unpacking libc-devtools (2.39-0ubuntu6) ... 239s Selecting previously unselected package linux-libc-dev:s390x. 239s Preparing to unpack .../63-linux-libc-dev_6.8.0-20.20_s390x.deb ... 239s Unpacking linux-libc-dev:s390x (6.8.0-20.20) ... 239s Selecting previously unselected package libcrypt-dev:s390x. 239s Preparing to unpack .../64-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 239s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 239s Selecting previously unselected package rpcsvc-proto. 239s Preparing to unpack .../65-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 239s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 239s Selecting previously unselected package libc6-dev:s390x. 239s Preparing to unpack .../66-libc6-dev_2.39-0ubuntu6_s390x.deb ... 239s Unpacking libc6-dev:s390x (2.39-0ubuntu6) ... 239s Preparing to unpack .../67-libevent-core-2.1-7_2.1.12-stable-9build1_s390x.deb ... 239s Unpacking libevent-core-2.1-7:s390x (2.1.12-stable-9build1) over (2.1.12-stable-9) ... 239s Preparing to unpack .../68-libldap-common_2.6.7+dfsg-1~exp1ubuntu6_all.deb ... 239s Unpacking libldap-common (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 239s Selecting previously unselected package linux-modules-6.8.0-20-generic. 239s Preparing to unpack .../69-linux-modules-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 239s Unpacking linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 240s Selecting previously unselected package linux-image-6.8.0-20-generic. 240s Preparing to unpack .../70-linux-image-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 240s Unpacking linux-image-6.8.0-20-generic (6.8.0-20.20) ... 240s Selecting previously unselected package linux-modules-extra-6.8.0-20-generic. 240s Preparing to unpack .../71-linux-modules-extra-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 240s Unpacking linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 240s Preparing to unpack .../72-linux-generic_6.8.0-20.20+1_s390x.deb 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... 243s Unpacking ubuntu-kernel-accessories (1.536build1) ... 243s Preparing to unpack .../90-kpartx_0.9.4-5ubuntu6_s390x.deb ... 243s Unpacking kpartx (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 243s Setting up pinentry-curses (1.2.1-3ubuntu4) ... 243s Setting up motd-news-config (13ubuntu8) ... 243s Setting up libtext-iconv-perl:s390x (1.7-8build2) ... 243s Setting up libtext-charwidth-perl:s390x (0.04-11build2) ... 243s Setting up libsharpyuv0:s390x (1.3.2-0.4build2) ... 243s Setting up liburcu8t64:s390x (0.14.0-3.1) ... 243s Setting up tcpdump (4.99.4-3ubuntu2) ... 243s Setting up libibverbs1:s390x (50.0-2build1) ... 243s Setting up ubuntu-kernel-accessories (1.536build1) ... 243s Setting up libapparmor1:s390x (4.0.0-beta3-0ubuntu2) ... 243s Setting up libatm1t64:s390x (1:2.5.1-5.1) ... 243s Setting up libgdbm6t64:s390x (1.23-5.1) ... 243s Setting up bsdextrautils (2.39.3-9ubuntu2) ... 243s Setting up libxpm4:s390x (1:3.5.17-1build1) ... 243s Setting up libgdbm-compat4t64:s390x (1.23-5.1) ... 243s Setting up xdg-user-dirs (0.18-1) ... 243s Setting up ibverbs-providers:s390x (50.0-2build1) ... 243s Setting up linux-headers-6.8.0-20 (6.8.0-20.20) ... 243s Setting up libmagic-mgc (1:5.45-3) ... 243s Setting up gawk (1:5.2.1-2build2) ... 243s Setting up manpages (6.05.01-1) ... 243s Setting up libtirpc-common (1.3.4+ds-1.1) ... 243s Setting up libbrotli1:s390x (1.1.0-2build1) ... 243s Setting up libsqlite3-0:s390x (3.45.1-1ubuntu1) ... 243s Setting up libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) ... 243s Setting up libuv1t64:s390x (1.48.0-1.1) ... 243s Setting up libmagic1t64:s390x (1:5.45-3) ... 243s Setting up rsyslog (8.2312.0-3ubuntu7) ... 243s info: The user `syslog' is already a member of `adm'. 244s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 244s Setting up libnghttp2-14:s390x (1.59.0-1build1) ... 244s Setting up libdeflate0:s390x (1.19-1) ... 244s Setting up linux-libc-dev:s390x (6.8.0-20.20) ... 244s Setting up libreiserfscore0t64 (1:3.6.27-7.1) ... 244s Setting up systemd-dev (255.4-1ubuntu5) ... 244s Setting up libparted2t64:s390x (3.6-3.1build2) ... 244s Setting up krb5-locales (1.20.1-6ubuntu1) ... 244s Setting up file (1:5.45-3) ... 244s Setting up lshw (02.19.git.2021.06.19.996aaad9c7-2build2) ... 244s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu6) ... 244s Setting up libprotobuf-c1:s390x (1.4.1-1ubuntu3) ... 244s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 244s Setting up xxd (2:9.1.0016-1ubuntu6) ... 244s Setting up libelf1t64:s390x (0.190-1.1build2) ... 244s Setting up libkrb5support0:s390x (1.20.1-6ubuntu1) ... 244s Setting up libdw1t64:s390x (0.190-1.1build2) ... 244s Setting up linux-headers-6.8.0-20-generic (6.8.0-20.20) ... 244s Setting up eject (2.39.3-9ubuntu2) ... 245s Setting up apparmor (4.0.0-beta3-0ubuntu2) ... 245s Installing new version of config file /etc/apparmor.d/abstractions/authentication ... 245s Installing new version of config file /etc/apparmor.d/abstractions/crypto ... 245s Installing new version of config file /etc/apparmor.d/abstractions/kde-open5 ... 245s Installing new version of config file /etc/apparmor.d/abstractions/openssl ... 245s Installing new version of config file /etc/apparmor.d/code ... 245s Installing new version of config file /etc/apparmor.d/firefox ... 245s Reloading AppArmor profiles 246s Setting up libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 246s No schema files found: doing nothing. 246s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 246s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 246s Setting up vim-common (2:9.1.0016-1ubuntu6) ... 246s Setting up libqrtr-glib0:s390x (1.2.2-1ubuntu3) ... 246s Setting up libslang2:s390x (2.3.3-3build1) ... 246s Setting up libnvme1t64 (1.8-3) ... 246s Setting up mtr-tiny (0.95-1.1build1) ... 246s Setting up gnupg-l10n (2.4.4-2ubuntu15) ... 247s Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) ... 247s Setting up libdbus-1-3:s390x (1.14.10-4ubuntu2) ... 247s Setting up xz-utils (5.6.0-0.2) ... 247s Setting up perl-modules-5.38 (5.38.2-3.2) ... 247s Setting up libproc2-0:s390x (2:4.0.4-4ubuntu2) ... 247s Setting up fonts-dejavu-mono (2.37-8) ... 247s Setting up libpng16-16t64:s390x (1.6.43-3) ... 247s Setting up libevent-core-2.1-7:s390x (2.1.12-stable-9build1) ... 247s Setting up libss2:s390x (1.47.0-2.4~exp1ubuntu2) ... 247s Setting up usb.ids (2024.03.18-1) ... 247s Setting up sudo (1.9.15p5-3ubuntu3) ... 247s Setting up fonts-dejavu-core (2.37-8) ... 247s Setting up dhcpcd-base (1:10.0.6-1ubuntu2) ... 247s Setting up gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) ... 247s Setting up libk5crypto3:s390x (1.20.1-6ubuntu1) ... 247s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 247s Setting up logsave (1.47.0-2.4~exp1ubuntu2) ... 247s Setting up libwebp7:s390x (1.3.2-0.4build2) ... 247s Setting up libfdisk1:s390x (2.39.3-9ubuntu2) ... 247s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 247s Setting up libaio1t64:s390x (0.3.113-6) ... 247s Setting up python-apt-common (2.7.7) ... 247s Setting up mount (2.39.3-9ubuntu2) ... 247s Setting up uuid-runtime (2.39.3-9ubuntu2) ... 247s uuidd.service is a disabled or a static unit not running, not starting it. 247s Setting up libmm-glib0:s390x (1.23.4-0ubuntu1) ... 247s Setting up groff-base (1.23.0-3build1) ... 248s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 248s Setting up libplymouth5:s390x (24.004.60-1ubuntu6) ... 248s Setting up dbus-session-bus-common (1.14.10-4ubuntu2) ... 248s Setting up procps (2:4.0.4-4ubuntu2) ... 248s Setting up gpgconf (2.4.4-2ubuntu15) ... 248s Setting up libcryptsetup12:s390x (2:2.7.0-1ubuntu2) ... 248s Setting up libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) ... 248s Setting up libjson-glib-1.0-common (1.8.0-2build1) ... 248s Setting up libkrb5-3:s390x (1.20.1-6ubuntu1) ... 248s Setting up libpython3.11-minimal:s390x (3.11.8-1build4) ... 248s Setting up libperl5.38t64:s390x (5.38.2-3.2) ... 248s Setting up tnftp (20230507-2build1) ... 248s Setting up dbus-system-bus-common (1.14.10-4ubuntu2) ... 248s Setting up libfido2-1:s390x (1.14.0-1build1) ... 248s Setting up libc-dev-bin (2.39-0ubuntu6) ... 248s Setting up openssl (3.0.13-0ubuntu2) ... 248s Setting up linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 248s Setting up readline-common (8.2-4) ... 248s Setting up libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) ... 248s Setting up libxmuu1:s390x (2:1.1.3-3build1) ... 248s Setting up dbus-bin (1.14.10-4ubuntu2) ... 248s Setting up info (7.1-3build1) ... 248s Setting up liblocale-gettext-perl (1.07-6ubuntu4) ... 248s Setting up gpg (2.4.4-2ubuntu15) ... 248s Setting up libgudev-1.0-0:s390x (1:238-3ubuntu2) ... 248s Setting up libpolkit-gobject-1-0:s390x (124-1ubuntu1) ... 248s Setting up libbpf1:s390x (1:1.3.0-2build1) ... 248s Setting up libmbim-glib4:s390x (1.31.2-0ubuntu2) ... 248s Setting up rsync (3.2.7-1build1) ... 249s rsync.service is a disabled or a static unit not running, not starting it. 249s Setting up libudisks2-0:s390x (2.10.1-6) ... 249s Setting up libkmod2:s390x (31+20240202-2ubuntu4) ... 249s Setting up bolt (0.9.6-2build1) ... 250s bolt.service is a disabled or a static unit not running, not starting it. 250s Setting up s390-tools-data (2.31.0-0ubuntu3) ... 250s Setting up libllvm18:s390x (1:18.1.2-1ubuntu2) ... 250s Setting up gnupg-utils (2.4.4-2ubuntu15) ... 250s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 250s Setting up cryptsetup-bin (2:2.7.0-1ubuntu2) ... 250s Setting up python3.11-minimal (3.11.8-1build4) ... 251s Setting up libclang1-18 (1:18.1.2-1ubuntu2) ... 251s Setting up manpages-dev (6.05.01-1) ... 251s Setting up linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 251s Setting up apt-utils (2.7.14) ... 251s Setting up gpg-agent (2.4.4-2ubuntu15) ... 252s Setting up libpython3.12-stdlib:s390x (3.12.2-4build3) ... 252s Setting up wget (1.21.4-1ubuntu2) ... 252s Setting up fontconfig-config (2.15.0-1.1ubuntu1) ... 252s Setting up libxmlb2:s390x (0.3.15-1build1) ... 252s Setting up btrfs-progs (6.6.3-1.1build1) ... 252s Setting up libpython3.11-stdlib:s390x (3.11.8-1build4) ... 252s Setting up python3.12 (3.12.2-4build3) ... 253s Setting up gpgsm (2.4.4-2ubuntu15) ... 253s Setting up inetutils-telnet (2:2.5-3ubuntu3) ... 253s Setting up parted (3.6-3.1build2) ... 253s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu2) ... 253s update-initramfs: deferring update (trigger activated) 254s e2scrub_all.service is a disabled or a static unit not running, not starting it. 254s Setting up linux-headers-generic (6.8.0-20.20+1) ... 254s Setting up dbus-daemon (1.14.10-4ubuntu2) ... 254s Setting up libmbim-proxy (1.31.2-0ubuntu2) ... 254s Setting up vim-tiny (2:9.1.0016-1ubuntu6) ... 254s Setting up kmod (31+20240202-2ubuntu4) ... 254s Setting up libnetplan1:s390x (1.0-1) ... 254s Setting up man-db (2.12.0-3build4) ... 254s Updating database of manual pages ... 256s man-db.service is a disabled or a static unit not running, not starting it. 256s Setting up fdisk (2.39.3-9ubuntu2) ... 256s Setting up libjson-glib-1.0-0:s390x (1.8.0-2build1) ... 256s Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) ... 256s Setting up hwdata (0.379-1) ... 256s Setting up perl (5.38.2-3.2) ... 256s Setting up libfreetype6:s390x (2.13.2+dfsg-1build2) ... 256s Setting up gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) ... 256s Setting up dbus (1.14.10-4ubuntu2) ... 256s A reboot is required to replace the running dbus-daemon. 256s Please reboot the system when convenient. 257s Setting up shared-mime-info (2.4-1build1) ... 257s Setting up libblockdev-utils3:s390x (3.1.0-1build1) ... 257s Setting up libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) ... 257s Setting up libsystemd-shared:s390x (255.4-1ubuntu5) ... 257s Setting up ftp (20230507-2build1) ... 257s Setting up keyboxd (2.4.4-2ubuntu15) ... 257s Setting up libdpkg-perl (1.22.6ubuntu5) ... 257s Setting up libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) ... 257s Setting up libssh-4:s390x (0.10.6-2build1) ... 257s Setting up libblockdev-nvme3:s390x (3.1.0-1build1) ... 257s Setting up libblockdev-fs3:s390x (3.1.0-1build1) ... 257s Setting up ieee-data (20220827.1) ... 257s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 257s Setting up libpolkit-agent-1-0:s390x (124-1ubuntu1) ... 257s Setting up libc6-dev:s390x (2.39-0ubuntu6) ... 257s Setting up libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 257s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 257s Setting up libclang-cpp18 (1:18.1.2-1ubuntu2) ... 257s Setting up libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 257s Setting up linux-tools-common (6.8.0-20.20) ... 257s Setting up libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 257s Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) ... 257s Setting up libpython3-stdlib:s390x (3.12.2-0ubuntu1) ... 257s Setting up python3.11 (3.11.8-1build4) ... 258s Setting up telnet (0.17+2.5-3ubuntu3) ... 258s Setting up libblockdev-mdraid3:s390x (3.1.0-1build1) ... 258s Setting up linux-headers-virtual (6.8.0-20.20+1) ... 258s Setting up libcurl4t64:s390x (8.5.0-2ubuntu8) ... 258s Setting up bpftrace (0.20.2-1ubuntu1) ... 258s Setting up bind9-libs:s390x (1:9.18.24-0ubuntu3) ... 258s Setting up linux-image-6.8.0-20-generic (6.8.0-20.20) ... 259s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-20-generic 259s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-20-generic 259s Setting up libtirpc3t64:s390x (1.3.4+ds-1.1) ... 259s Setting up e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) ... 259s Setting up libblockdev-swap3:s390x (3.1.0-1build1) ... 259s Setting up iproute2 (6.1.0-1ubuntu5) ... 259s Setting up openssh-client (1:9.6p1-3ubuntu11) ... 259s Setting up libgusb2:s390x (0.4.8-1build1) ... 259s Setting up libblockdev-loop3:s390x (3.1.0-1build1) ... 259s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 259s Setting up libqmi-glib5:s390x (1.35.2-0ubuntu1) ... 259s Setting up linux-tools-6.8.0-20 (6.8.0-20.20) ... 259s Setting up python3 (3.12.2-0ubuntu1) ... 259s Setting up systemd (255.4-1ubuntu5) ... 260s Setting up libblockdev3:s390x (3.1.0-1build1) ... 260s Setting up libjcat1:s390x (0.2.0-2build2) ... 260s Setting up dpkg-dev (1.22.6ubuntu5) ... 260s Setting up libblockdev-part3:s390x (3.1.0-1build1) ... 260s Setting up dirmngr (2.4.4-2ubuntu15) ... 260s Setting up linux-tools-6.8.0-20-generic (6.8.0-20.20) ... 260s Setting up python3-cryptography (41.0.7-4build2) ... 260s Setting up python3-gi (3.47.0-3build1) ... 260s Setting up libgd3:s390x (2.3.3-9ubuntu3) ... 260s Setting up systemd-timesyncd (255.4-1ubuntu5) ... 261s Setting up udev (255.4-1ubuntu5) ... 262s Setting up python3-typing-extensions (4.10.0-1) ... 262s Setting up lsof (4.95.0-1build2) ... 262s Setting up python3-pyrsistent:s390x (0.20.0-1build1) ... 262s Setting up python3-netaddr (0.8.0-2ubuntu1) ... 262s Setting up kpartx (0.9.4-5ubuntu6) ... 262s Setting up libnsl2:s390x (1.3.0-3build2) ... 262s Setting up gnupg (2.4.4-2ubuntu15) ... 262s Setting up python3-netplan (1.0-1) ... 262s Setting up curl (8.5.0-2ubuntu8) ... 262s Setting up libvolume-key1:s390x (0.3.12-7build1) ... 262s Setting up linux-image-virtual (6.8.0-20.20+1) ... 262s Setting up netplan-generator (1.0-1) ... 262s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 262s Setting up bind9-host (1:9.18.24-0ubuntu3) ... 262s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ... 262s Setting up python3-bpfcc (0.29.1+ds-1ubuntu4) ... 263s Setting up libc-devtools (2.39-0ubuntu6) ... 263s Setting up systemd-resolved (255.4-1ubuntu5) ... 263s Setting up python3-pkg-resources (68.1.2-2ubuntu1) ... 263s Setting up python3-distutils (3.12.2-3ubuntu1.1) ... 264s python3.12: can't get files for byte-compilation 264s Setting up openssh-sftp-server (1:9.6p1-3ubuntu11) ... 264s Setting up linux-image-generic (6.8.0-20.20+1) ... 264s Setting up systemd-sysv (255.4-1ubuntu5) ... 264s Setting up python3-dbus (1.3.2-5build2) ... 264s Setting up python3-setuptools (68.1.2-2ubuntu1) ... 264s Setting up gpg-wks-client (2.4.4-2ubuntu15) ... 264s Setting up openssh-server (1:9.6p1-3ubuntu11) ... 265s Replacing config file /etc/ssh/sshd_config with new version 266s Created symlink /etc/systemd/system/ssh.service.requires/ssh.socket → /usr/lib/systemd/system/ssh.socket. 267s Setting up linux-generic (6.8.0-20.20+1) ... 267s Setting up libblockdev-crypto3:s390x (3.1.0-1build1) ... 267s Setting up python3-gdbm:s390x (3.12.2-3ubuntu1.1) ... 267s Setting up plymouth (24.004.60-1ubuntu6) ... 267s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 267s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 271s Not invoking zipl: initrd doesn't exist yet 271s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 271s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 272s Setting up python3-apt (2.7.7) ... 272s Setting up libfwupd2:s390x (1.9.15-2) ... 272s Setting up libnss-systemd:s390x (255.4-1ubuntu5) ... 272s Setting up libqmi-proxy (1.35.2-0ubuntu1) ... 272s Setting up multipath-tools (0.9.4-5ubuntu6) ... 273s Setting up netplan.io (1.0-1) ... 273s Setting up linux-virtual (6.8.0-20.20+1) ... 273s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) ... 273s update-initramfs: deferring update (trigger activated) 273s Setting up bpfcc-tools (0.29.1+ds-1ubuntu4) ... 273s Setting up libpam-systemd:s390x (255.4-1ubuntu5) ... 273s Setting up bind9-dnsutils (1:9.18.24-0ubuntu3) ... 273s Setting up ubuntu-pro-client (31.2.2) ... 274s Setting up fwupd (1.9.15-2) ... 275s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 275s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 275s Setting up ubuntu-pro-client-l10n (31.2.2) ... 275s Setting up udisks2 (2.10.1-6) ... 275s Setting up dbus-user-session (1.14.10-4ubuntu2) ... 275s Processing triggers for install-info (7.1-3build1) ... 275s Processing triggers for initramfs-tools (0.142ubuntu23) ... 275s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 275s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 279s Not invoking zipl: initrd doesn't exist yet 279s Processing triggers for libc-bin (2.39-0ubuntu6) ... 279s Processing triggers for ufw (0.36.2-5) ... 279s Processing triggers for debianutils (5.17) ... 279s Processing triggers for linux-image-6.8.0-20-generic (6.8.0-20.20) ... 279s /etc/kernel/postinst.d/initramfs-tools: 279s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 279s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 283s Using config file '/etc/zipl.conf' 283s Building bootmap in '/boot' 283s Adding IPL section 'ubuntu' (default) 283s Preparing boot device for LD-IPL: vda (0000). 283s Done. 283s /etc/kernel/postinst.d/zz-zipl: 283s Using config file '/etc/zipl.conf' 283s Building bootmap in '/boot' 283s Adding IPL section 'ubuntu' (default) 283s Preparing boot device for LD-IPL: vda (0000). 283s Done. 284s Reading package lists... 284s Building dependency tree... 284s Reading state information... 284s The following packages will be REMOVED: 284s libaio1* libnetplan0* python3-distutils* python3-lib2to3* 285s 0 upgraded, 0 newly installed, 4 to remove and 1 not upgraded. 285s After this operation, 1445 kB disk space will be freed. 285s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81787 files and directories currently installed.) 285s Removing libaio1:s390x (0.3.113-5) ... 285s Removing libnetplan0:s390x (0.107.1-3) ... 285s Removing python3-distutils (3.12.2-3ubuntu1.1) ... 285s Removing python3-lib2to3 (3.12.2-3ubuntu1.1) ... 285s Processing triggers for libc-bin (2.39-0ubuntu6) ... 285s autopkgtest [02:25:18]: rebooting testbed after setup commands that affected boot 317s autopkgtest [02:25:50]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP Mon Mar 18 10:49:25 UTC 2024 320s autopkgtest [02:25:53]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-survey 324s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-survey 4.2-1-1 (dsc) [2212 B] 324s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-survey 4.2-1-1 (tar) [2153 kB] 324s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-survey 4.2-1-1 (diff) [4304 B] 324s gpgv: Signature made Wed Jun 28 12:15:39 2023 UTC 324s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 324s gpgv: issuer "tille@debian.org" 324s gpgv: Can't check signature: No public key 324s dpkg-source: warning: cannot verify inline signature for ./r-cran-survey_4.2-1-1.dsc: no acceptable signature found 324s autopkgtest [02:25:57]: testing package r-cran-survey version 4.2-1-1 324s autopkgtest [02:25:57]: build not needed 327s autopkgtest [02:26:00]: test run-unit-test: preparing testbed 329s Reading package lists... 329s Building dependency tree... 329s Reading state information... 329s Starting pkgProblemResolver with broken count: 0 329s Starting 2 pkgProblemResolver with broken count: 0 329s Done 329s The following additional packages will be installed: 329s fontconfig fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2 329s libdatrie1 libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 329s libjs-bootstrap libjs-highlight.js libjs-jquery libjs-jquery-datatables 329s libjs-mathjax liblapack3 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 329s libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libsm6 libtcl8.6 329s libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0 libxft2 329s libxrender1 libxss1 libxt6t64 littler node-normalize.css r-base-core 329s r-cran-abind r-cran-aer r-cran-backports r-cran-bit r-cran-bit64 r-cran-blob 329s r-cran-boot r-cran-brio r-cran-broom r-cran-cachem r-cran-callr r-cran-car 329s r-cran-cardata r-cran-caret r-cran-cellranger r-cran-class r-cran-cli 329s r-cran-clipr r-cran-clock r-cran-codetools r-cran-colorspace r-cran-conquer 329s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi 329s r-cran-desc r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dplyr 329s r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 329s r-cran-fastmap r-cran-forcats r-cran-foreach r-cran-foreign r-cran-formula 330s r-cran-fs r-cran-future r-cran-future.apply r-cran-generics r-cran-ggplot2 330s r-cran-globals r-cran-glue r-cran-gower r-cran-gtable r-cran-hardhat 330s r-cran-haven r-cran-highr r-cran-hms r-cran-ipred r-cran-isoband 330s r-cran-iterators r-cran-jsonlite r-cran-kernsmooth r-cran-knitr 330s r-cran-labeling r-cran-lattice r-cran-lava r-cran-lifecycle r-cran-listenv 330s r-cran-littler r-cran-lme4 r-cran-lmtest r-cran-lubridate r-cran-magrittr 330s r-cran-maptools r-cran-mass r-cran-matrix r-cran-matrixmodels 330s r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-minqa r-cran-mitools 330s r-cran-modelmetrics r-cran-munsell r-cran-nlme r-cran-nloptr r-cran-nnet 330s r-cran-numderiv r-cran-openxlsx r-cran-parallelly r-cran-pbkrtest 330s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 330s r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-praise r-cran-prettyunits 330s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progress r-cran-progressr 330s r-cran-proxy r-cran-ps r-cran-purrr r-cran-quantreg r-cran-r.methodss3 330s r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp 330s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-readr r-cran-readxl 330s r-cran-recipes r-cran-rematch r-cran-rematch2 r-cran-reshape2 r-cran-rio 330s r-cran-rlang r-cran-rpart r-cran-rprojroot r-cran-rsqlite r-cran-sandwich 330s r-cran-scales r-cran-shape r-cran-sp r-cran-sparsem r-cran-squarem 330s r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survey r-cran-survival 330s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 330s r-cran-timechange r-cran-timedate r-cran-tzdb r-cran-utf8 r-cran-vctrs 330s r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr r-cran-writexl 330s r-cran-xfun r-cran-yaml r-cran-zip r-cran-zoo unzip x11-common xdg-utils zip 330s Suggested packages: 330s fonts-mathjax-extras fonts-stix libjs-mathjax-doc tcl8.6 tk8.6 330s libjs-html5shiv elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html 330s r-cran-roxygen2 r-cran-rmarkdown r-cran-ff r-cran-covr r-cran-bbmle 330s r-cran-cluster r-cran-cmprsk r-cran-coda r-cran-emmeans r-cran-epir 330s r-cran-gam r-cran-gee r-cran-geepack r-cran-glmnet r-cran-gmm r-cran-hmisc 330s r-cran-irlba r-cran-interp r-cran-ks r-cran-lavaan r-cran-leaps 330s r-cran-lsmeans r-cran-maps r-cran-mclust r-cran-metafor r-cran-modeldata 330s r-cran-multcomp r-cran-network r-cran-ordinal r-cran-plm r-cran-psych 330s r-cran-robust r-cran-robustbase r-cran-rsample r-cran-spdep 330s r-cran-spatialreg r-cran-spelling r-cran-systemfit r-cran-tseries 330s r-cran-bradleyterry2 r-cran-ellipse r-cran-mlbench r-cran-party r-cran-pls 330s r-cran-randomforest r-cran-rann r-cran-rstudioapi r-cran-slider 330s r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs 330s r-cran-png r-cran-jpeg r-cran-viridis r-cran-rmysql r-cran-tinytest 330s r-cran-markdown r-cran-th.data r-cran-magick r-cran-sf r-cran-getopt 330s r-cran-rgeos r-cran-spatstat.geom r-cran-raster r-cran-polyclip 330s r-cran-plotrix r-cran-spatstat.linnet r-cran-spatstat.utils r-cran-spatstat 330s r-cran-httr r-cran-rodbc r-cran-formattable r-cran-nanotime 330s r-cran-palmerpenguins r-cran-units r-cran-vdiffr r-cran-inline r-cran-hexbin 330s r-cran-bench r-cran-here r-cran-htmltools r-cran-runit 330s Recommended packages: 330s javascript-common r-recommended r-base-dev r-doc-html r-cran-dynlm 330s r-cran-effects r-cran-fgarch r-cran-forecast r-cran-plm r-cran-pscl 330s r-cran-rgl r-cran-rocr r-cran-scatterplot3d r-cran-strucchange 330s r-cran-systemfit r-cran-tseries r-cran-urca r-cran-covr r-cran-mockery 330s r-cran-spelling r-cran-earth r-cran-mda r-cran-mlmetrics r-cran-fastica 330s r-cran-kernlab r-cran-themis r-cran-htmltools r-cran-htmlwidgets 330s r-cran-rmarkdown r-cran-rstudioapi r-cran-whoami r-cran-bench r-cran-decor 330s r-cran-lobstr r-cran-later r-cran-httpuv r-cran-webutils r-cran-xts 330s r-cran-nanotime r-cran-gh r-cran-dbplyr r-cran-rmysql r-cran-rpostgresql 330s r-cran-unitizer r-cran-rhpcblasctl r-cran-r.rsp r-cran-markdown 330s r-cran-hexbin r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp 330s r-cran-profvis r-cran-ragg r-cran-sf r-cran-svglite r-cran-vdiffr 330s r-cran-xml2 r-cran-devtools r-cran-modeldata r-cran-roxygen2 r-cran-usethis 330s r-cran-testit r-cran-mlbench r-cran-httr r-cran-bslib r-cran-formatr 330s r-cran-gridsvg r-cran-jpeg r-cran-magick r-cran-png r-cran-reticulate 330s r-cran-sass r-cran-tikzdevice r-cran-tinytex r-cran-webshot 330s node-highlight.js r-cran-ellipse r-cran-fields r-cran-geepack r-bioc-graph 330s r-cran-bookdown r-cran-igraph r-cran-lavasearch2 r-cran-mets r-cran-optimx 330s r-cran-polycor r-cran-lintr r-cran-tidyverse r-cran-base64enc 330s r-cran-r.devices r-cran-bitops r-cran-mathjaxr r-cran-mockr r-cran-remotes 330s r-cran-doparallel r-cran-itertools r-cran-logcondens r-cran-webfakes 330s r-cran-pbmcapply r-cran-furrr r-cran-shiny r-cran-commonmark r-cran-cba 330s r-cran-pingr r-cran-ddalpha r-cran-dials r-cran-rann r-cran-rcpproll 330s r-cran-rsample r-cran-rspectra r-cran-splines2 r-cran-dbitest r-cran-gert 330s r-cran-rvest r-cran-dichromat r-cran-deldir r-cran-terra r-cran-raster 330s r-cran-setrng r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-mime 330s r-cran-renv r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl 330s libx11-protocol-perl x11-utils x11-xserver-utils 330s The following NEW packages will be installed: 330s autopkgtest-satdep fontconfig fonts-glyphicons-halflings fonts-mathjax 330s libblas3 libcairo2 libdatrie1 libgfortran5 libgomp1 libgraphite2-3 330s libharfbuzz0b libice6 libjs-bootstrap libjs-highlight.js libjs-jquery 330s libjs-jquery-datatables libjs-mathjax liblapack3 libnlopt0 libpango-1.0-0 330s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 330s libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0 330s libxft2 libxrender1 libxss1 libxt6t64 littler node-normalize.css r-base-core 330s r-cran-abind r-cran-aer r-cran-backports r-cran-bit r-cran-bit64 r-cran-blob 330s r-cran-boot r-cran-brio r-cran-broom r-cran-cachem r-cran-callr r-cran-car 330s r-cran-cardata r-cran-caret r-cran-cellranger r-cran-class r-cran-cli 330s r-cran-clipr r-cran-clock r-cran-codetools r-cran-colorspace r-cran-conquer 330s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi 330s r-cran-desc r-cran-diagram r-cran-diffobj r-cran-digest r-cran-dplyr 330s r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 330s r-cran-fastmap r-cran-forcats r-cran-foreach r-cran-foreign r-cran-formula 330s r-cran-fs r-cran-future r-cran-future.apply r-cran-generics r-cran-ggplot2 330s r-cran-globals r-cran-glue r-cran-gower r-cran-gtable r-cran-hardhat 330s r-cran-haven r-cran-highr r-cran-hms r-cran-ipred r-cran-isoband 330s r-cran-iterators r-cran-jsonlite r-cran-kernsmooth r-cran-knitr 330s r-cran-labeling r-cran-lattice r-cran-lava r-cran-lifecycle r-cran-listenv 330s r-cran-littler r-cran-lme4 r-cran-lmtest r-cran-lubridate r-cran-magrittr 330s r-cran-maptools r-cran-mass r-cran-matrix r-cran-matrixmodels 330s r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-minqa r-cran-mitools 330s r-cran-modelmetrics r-cran-munsell r-cran-nlme r-cran-nloptr r-cran-nnet 330s r-cran-numderiv r-cran-openxlsx r-cran-parallelly r-cran-pbkrtest 330s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 330s r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-praise r-cran-prettyunits 330s r-cran-proc r-cran-processx r-cran-prodlim r-cran-progress r-cran-progressr 330s r-cran-proxy r-cran-ps r-cran-purrr r-cran-quantreg r-cran-r.methodss3 330s r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp 330s r-cran-rcpparmadillo r-cran-rcppeigen r-cran-readr r-cran-readxl 330s r-cran-recipes r-cran-rematch r-cran-rematch2 r-cran-reshape2 r-cran-rio 330s r-cran-rlang r-cran-rpart r-cran-rprojroot r-cran-rsqlite r-cran-sandwich 330s r-cran-scales r-cran-shape r-cran-sp r-cran-sparsem r-cran-squarem 330s r-cran-statmod r-cran-stringi r-cran-stringr r-cran-survey r-cran-survival 330s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect 330s r-cran-timechange r-cran-timedate r-cran-tzdb r-cran-utf8 r-cran-vctrs 330s r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr r-cran-writexl 330s r-cran-xfun r-cran-yaml r-cran-zip r-cran-zoo unzip x11-common xdg-utils zip 330s 0 upgraded, 198 newly installed, 0 to remove and 1 not upgraded. 330s Need to get 161 MB/161 MB of archives. 330s After this operation, 324 MB of additional disk space will be used. 330s Get:1 /tmp/autopkgtest.1ZO1nF/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B] 330s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1.1ubuntu1 [191 kB] 330s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 330s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 331s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 331s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 331s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 331s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 331s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 331s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcairo2 s390x 1.18.0-1ubuntu1 [589 kB] 331s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 331s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240315-1ubuntu1 [600 kB] 331s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240315-1ubuntu1 [151 kB] 332s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 332s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libharfbuzz0b s390x 8.3.0-2build1 [515 kB] 332s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 332s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 332s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 332s Get:19 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 332s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 332s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 332s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 332s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 332s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 332s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpango-1.0-0 s390x 1.52.1+ds-1 [242 kB] 332s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangoft2-1.0-0 s390x 1.52.1+ds-1 [44.2 kB] 332s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangocairo-1.0-0 s390x 1.52.1+ds-1 [28.7 kB] 332s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 332s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 332s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 332s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtcl8.6 s390x 8.6.14+dfsg-1 [1037 kB] 332s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 332s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 332s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.14-1 [833 kB] 333s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxt6t64 s390x 1:1.2.1-1.2 [184 kB] 333s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 333s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 333s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 333s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-base-core s390x 4.3.3-2build1 [27.1 MB] 334s Get:40 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 334s Get:41 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 334s Get:42 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 334s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 334s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cardata all 3.0.5-1 [1819 kB] 334s Get:45 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 334s Get:46 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 335s Get:47 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nlme s390x 3.1.164-1 [2268 kB] 335s Get:48 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 335s Get:49 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 335s Get:50 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nnet s390x 7.3-19-2 [112 kB] 335s Get:51 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-boot all 1.3-30-1 [619 kB] 335s Get:52 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 335s Get:53 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 335s Get:54 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-minqa s390x 1.2.6-1 [134 kB] 335s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x libnlopt0 s390x 2.7.1-5build2 [223 kB] 335s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-brio s390x 1.1.4-1 [37.8 kB] 335s Get:57 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ps s390x 1.7.6-1 [313 kB] 335s Get:58 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 335s Get:59 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-processx s390x 3.8.3-1 [364 kB] 335s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-callr all 3.7.5-1 [429 kB] 335s Get:61 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 335s Get:62 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 335s Get:63 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 335s Get:64 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 335s Get:65 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 335s Get:66 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 335s Get:67 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 335s Get:68 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 335s Get:69 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 335s Get:70 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 335s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-fs s390x 1.6.3+dfsg-1build1 [229 kB] 335s Get:72 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgbuild all 1.4.3-1 [209 kB] 335s Get:73 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rprojroot all 2.0.4-1 [124 kB] 335s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-withr all 3.0.0+dfsg-1 [228 kB] 335s Get:75 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgload all 1.3.4-1 [207 kB] 335s Get:76 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 335s Get:77 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 335s Get:78 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 336s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 336s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 336s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 336s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 336s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 336s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 336s Get:85 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-waldo all 0.5.2-1build1 [120 kB] 336s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-testthat s390x 3.2.1-1 [1688 kB] 336s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nloptr s390x 2.0.3-1 [373 kB] 336s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcppeigen s390x 0.3.4.0.0-1 [1428 kB] 336s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-statmod s390x 1.5.0-1 [294 kB] 336s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lme4 s390x 1.1-35.1-4 [4143 kB] 336s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-backports s390x 1.4.1-1 [101 kB] 336s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 336s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 336s Get:94 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 336s Get:95 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 336s Get:96 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 336s Get:97 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 336s Get:98 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 336s Get:99 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 336s Get:100 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 336s Get:101 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 336s Get:102 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-numderiv all 2016.8-1.1-3 [115 kB] 336s Get:103 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 337s Get:104 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 337s Get:105 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 337s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 337s Get:107 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 337s Get:108 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pbkrtest all 0.5.2-2 [182 kB] 337s Get:109 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sparsem s390x 1.81-1 [910 kB] 337s Get:110 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixmodels all 0.5-3-1 [361 kB] 337s Get:111 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-survival s390x 3.5-8-1 [6161 kB] 338s Get:112 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 338s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcpparmadillo s390x 0.12.8.1.0-1 [869 kB] 338s Get:114 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 338s Get:115 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 338s Get:116 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-farver s390x 2.1.1-1 [1347 kB] 338s Get:117 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 338s Get:118 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-colorspace s390x 2.1-0+dfsg-1 [1540 kB] 338s Get:119 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-munsell all 0.5.0-2build1 [208 kB] 338s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 338s Get:121 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 338s Get:122 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 338s Get:123 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 338s Get:124 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-class s390x 7.3-22-2 [88.6 kB] 338s Get:125 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-proxy s390x 0.4-27-1 [182 kB] 338s Get:126 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-e1071 s390x 1.7-14-1 [566 kB] 338s Get:127 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 338s Get:128 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-iterators all 1.0.14-1 [336 kB] 338s Get:129 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-foreach all 1.5.2-1 [124 kB] 338s Get:130 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-data.table s390x 1.14.10+dfsg-1 [1880 kB] 338s Get:131 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-modelmetrics s390x 1.2.2.2-1build1 [122 kB] 338s Get:132 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 338s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-proc s390x 1.18.5-1 [968 kB] 338s Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB] 338s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-clock s390x 0.7.0-1.1 [1799 kB] 339s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gower s390x 1.0.1-1 [207 kB] 339s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hardhat all 1.3.1+dfsg-1 [554 kB] 339s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rpart s390x 4.1.23-1 [667 kB] 339s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shape all 1.4.6-1 [770 kB] 339s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-diagram all 1.6.5-2 [656 kB] 339s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-kernsmooth s390x 2.23-22-1 [93.0 kB] 339s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-globals all 0.16.2-1 [117 kB] 339s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-listenv all 0.9.1+dfsg-1 [112 kB] 339s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-parallelly s390x 1.37.1-1 [365 kB] 339s Get:145 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-future all 1.33.1+dfsg-1 [634 kB] 339s Get:146 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-future.apply all 1.11.1+dfsg-1 [171 kB] 339s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progressr all 0.14.0-1 [338 kB] 339s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-squarem all 2021.1-1 [179 kB] 339s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lava all 1.7.3+dfsg-1 [2166 kB] 339s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prodlim s390x 2023.08.28-1 [412 kB] 339s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ipred s390x 0.9-14-1 [383 kB] 339s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-timechange s390x 0.3.0-1 [185 kB] 339s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lubridate s390x 1.9.3+dfsg-1 [1010 kB] 339s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-timedate s390x 4032.109-1 [1229 kB] 339s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-recipes all 1.0.9+dfsg-1 [1964 kB] 339s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB] 339s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-caret s390x 6.0-94+dfsg-1 [3433 kB] 339s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-conquer s390x 1.3.3-1 [459 kB] 339s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-quantreg s390x 5.97-1 [1550 kB] 340s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sp s390x 1:2.1-2+dfsg-1 [1449 kB] 340s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-foreign s390x 0.8.86-1 [247 kB] 340s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-maptools s390x 1:1.1-8+dfsg-1 [1367 kB] 340s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-forcats all 1.0.0-1 [369 kB] 340s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 340s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB] 340s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 340s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 340s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 340s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 340s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB] 340s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB] 341s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-haven s390x 2.5.4-1 [355 kB] 341s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-curl s390x 5.2.0+dfsg-1build1 [177 kB] 341s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rematch all 2.0.0-1 [18.3 kB] 341s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cellranger all 1.1.0-3 [102 kB] 341s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-readxl s390x 1.4.3-1 [730 kB] 341s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-writexl s390x 1.5.0-1 [160 kB] 341s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 341s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.oo all 1.26.0-1 [955 kB] 341s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.utils all 2.12.3-1 [1386 kB] 341s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-zip s390x 2.3.1-1 [130 kB] 341s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openxlsx s390x 4.2.5.2-1 [1938 kB] 341s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rio all 1.0.1-1 [529 kB] 341s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-car all 3.1-2-2 [1692 kB] 341s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-zoo s390x 1.8-12-2 [984 kB] 341s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lmtest s390x 0.9.40-1 [396 kB] 342s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sandwich all 3.1-0-1 [1484 kB] 342s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formula all 1.2-5-1 [158 kB] 342s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-aer all 1.2-12-1 [2582 kB] 342s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 342s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 342s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 342s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 342s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 342s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mitools all 2.4-2build1 [265 kB] 342s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 342s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 342s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-survey all 4.2-1-1 [3189 kB] 343s Preconfiguring packages ... 343s Fetched 161 MB in 13s (12.4 MB/s) 343s Selecting previously unselected package fontconfig. 343s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81563 files and directories currently installed.) 343s Preparing to unpack .../000-fontconfig_2.15.0-1.1ubuntu1_s390x.deb ... 343s Unpacking fontconfig (2.15.0-1.1ubuntu1) ... 343s Selecting previously unselected package fonts-glyphicons-halflings. 343s Preparing to unpack .../001-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 343s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 343s Selecting previously unselected package fonts-mathjax. 343s Preparing to unpack .../002-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 343s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 344s Selecting previously unselected package libblas3:s390x. 344s Preparing to unpack .../003-libblas3_3.12.0-3_s390x.deb ... 344s Unpacking libblas3:s390x (3.12.0-3) ... 344s Selecting previously unselected package libpixman-1-0:s390x. 344s Preparing to unpack .../004-libpixman-1-0_0.42.2-1_s390x.deb ... 344s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 344s Selecting previously unselected package libxcb-render0:s390x. 344s Preparing to unpack .../005-libxcb-render0_1.15-1_s390x.deb ... 344s Unpacking libxcb-render0:s390x (1.15-1) ... 344s Selecting previously unselected package libxcb-shm0:s390x. 344s Preparing to unpack .../006-libxcb-shm0_1.15-1_s390x.deb ... 344s Unpacking libxcb-shm0:s390x (1.15-1) ... 344s Selecting previously unselected package libxrender1:s390x. 344s Preparing to unpack .../007-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 344s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 344s Selecting previously unselected package libcairo2:s390x. 344s Preparing to unpack .../008-libcairo2_1.18.0-1ubuntu1_s390x.deb ... 344s Unpacking libcairo2:s390x (1.18.0-1ubuntu1) ... 344s Selecting previously unselected package libdatrie1:s390x. 344s Preparing to unpack .../009-libdatrie1_0.2.13-3_s390x.deb ... 344s Unpacking libdatrie1:s390x (0.2.13-3) ... 344s Selecting previously unselected package libgfortran5:s390x. 344s Preparing to unpack .../010-libgfortran5_14-20240315-1ubuntu1_s390x.deb ... 344s Unpacking libgfortran5:s390x (14-20240315-1ubuntu1) ... 344s Selecting previously unselected package libgomp1:s390x. 344s Preparing to unpack .../011-libgomp1_14-20240315-1ubuntu1_s390x.deb ... 344s Unpacking libgomp1:s390x (14-20240315-1ubuntu1) ... 344s Selecting previously unselected package libgraphite2-3:s390x. 344s Preparing to unpack .../012-libgraphite2-3_1.3.14-2_s390x.deb ... 344s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 344s Selecting previously unselected package libharfbuzz0b:s390x. 344s Preparing to unpack .../013-libharfbuzz0b_8.3.0-2build1_s390x.deb ... 344s Unpacking libharfbuzz0b:s390x (8.3.0-2build1) ... 344s Selecting previously unselected package x11-common. 344s Preparing to unpack .../014-x11-common_1%3a7.7+23ubuntu2_all.deb ... 344s Unpacking x11-common (1:7.7+23ubuntu2) ... 344s Selecting previously unselected package libice6:s390x. 344s Preparing to unpack .../015-libice6_2%3a1.0.10-1build2_s390x.deb ... 344s Unpacking libice6:s390x (2:1.0.10-1build2) ... 344s Selecting previously unselected package libjs-bootstrap. 344s Preparing to unpack .../016-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 344s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 344s Selecting previously unselected package libjs-highlight.js. 344s Preparing to unpack .../017-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 344s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 344s Selecting previously unselected package libjs-jquery. 344s Preparing to unpack .../018-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 344s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 344s Selecting previously unselected package libjs-jquery-datatables. 344s Preparing to unpack .../019-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 344s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 344s Selecting previously unselected package liblapack3:s390x. 344s Preparing to unpack .../020-liblapack3_3.12.0-3_s390x.deb ... 344s Unpacking liblapack3:s390x (3.12.0-3) ... 344s Selecting previously unselected package libthai-data. 344s Preparing to unpack .../021-libthai-data_0.1.29-2_all.deb ... 344s Unpacking libthai-data (0.1.29-2) ... 344s Selecting previously unselected package libthai0:s390x. 344s Preparing to unpack .../022-libthai0_0.1.29-2_s390x.deb ... 344s Unpacking libthai0:s390x (0.1.29-2) ... 344s Selecting previously unselected package libpango-1.0-0:s390x. 344s Preparing to unpack .../023-libpango-1.0-0_1.52.1+ds-1_s390x.deb ... 344s Unpacking libpango-1.0-0:s390x (1.52.1+ds-1) ... 344s Selecting previously unselected package libpangoft2-1.0-0:s390x. 344s Preparing to unpack .../024-libpangoft2-1.0-0_1.52.1+ds-1_s390x.deb ... 344s Unpacking libpangoft2-1.0-0:s390x (1.52.1+ds-1) ... 344s Selecting previously unselected package libpangocairo-1.0-0:s390x. 344s Preparing to unpack .../025-libpangocairo-1.0-0_1.52.1+ds-1_s390x.deb ... 344s Unpacking libpangocairo-1.0-0:s390x (1.52.1+ds-1) ... 344s Selecting previously unselected package libpaper1:s390x. 344s Preparing to unpack .../026-libpaper1_1.1.29_s390x.deb ... 344s Unpacking libpaper1:s390x (1.1.29) ... 344s Selecting previously unselected package libpaper-utils. 344s Preparing to unpack .../027-libpaper-utils_1.1.29_s390x.deb ... 344s Unpacking libpaper-utils (1.1.29) ... 344s Selecting previously unselected package libsm6:s390x. 344s Preparing to unpack .../028-libsm6_2%3a1.2.3-1build2_s390x.deb ... 344s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 344s Selecting previously unselected package libtcl8.6:s390x. 344s Preparing to unpack .../029-libtcl8.6_8.6.14+dfsg-1_s390x.deb ... 344s Unpacking libtcl8.6:s390x (8.6.14+dfsg-1) ... 344s Selecting previously unselected package libxft2:s390x. 344s Preparing to unpack .../030-libxft2_2.3.6-1_s390x.deb ... 344s Unpacking libxft2:s390x (2.3.6-1) ... 344s Selecting previously unselected package libxss1:s390x. 344s Preparing to unpack .../031-libxss1_1%3a1.2.3-1build2_s390x.deb ... 344s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 344s Selecting previously unselected package libtk8.6:s390x. 344s Preparing to unpack .../032-libtk8.6_8.6.14-1_s390x.deb ... 344s Unpacking libtk8.6:s390x (8.6.14-1) ... 344s Selecting previously unselected package libxt6t64:s390x. 344s Preparing to unpack .../033-libxt6t64_1%3a1.2.1-1.2_s390x.deb ... 344s Unpacking libxt6t64:s390x (1:1.2.1-1.2) ... 344s Selecting previously unselected package zip. 344s Preparing to unpack .../034-zip_3.0-13_s390x.deb ... 344s Unpacking zip (3.0-13) ... 344s Selecting previously unselected package unzip. 344s Preparing to unpack .../035-unzip_6.0-28ubuntu3_s390x.deb ... 344s Unpacking unzip (6.0-28ubuntu3) ... 344s Selecting previously unselected package xdg-utils. 344s Preparing to unpack .../036-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 344s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 344s Selecting previously unselected package r-base-core. 344s Preparing to unpack .../037-r-base-core_4.3.3-2build1_s390x.deb ... 344s Unpacking r-base-core (4.3.3-2build1) ... 345s Selecting previously unselected package r-cran-littler. 345s Preparing to unpack .../038-r-cran-littler_0.3.19-1_s390x.deb ... 345s Unpacking r-cran-littler (0.3.19-1) ... 345s Selecting previously unselected package littler. 345s Preparing to unpack .../039-littler_0.3.19-1_all.deb ... 345s Unpacking littler (0.3.19-1) ... 345s Selecting previously unselected package node-normalize.css. 345s Preparing to unpack .../040-node-normalize.css_8.0.1-5_all.deb ... 345s Unpacking node-normalize.css (8.0.1-5) ... 345s Selecting previously unselected package r-cran-abind. 345s Preparing to unpack .../041-r-cran-abind_1.4-5-2_all.deb ... 345s Unpacking r-cran-abind (1.4-5-2) ... 345s Selecting previously unselected package r-cran-cardata. 345s Preparing to unpack .../042-r-cran-cardata_3.0.5-1_all.deb ... 345s Unpacking r-cran-cardata (3.0.5-1) ... 345s Selecting previously unselected package r-cran-mass. 345s Preparing to unpack .../043-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 345s Unpacking r-cran-mass (7.3-60.0.1-1) ... 345s Selecting previously unselected package r-cran-lattice. 345s Preparing to unpack .../044-r-cran-lattice_0.22-5-1_s390x.deb ... 345s Unpacking r-cran-lattice (0.22-5-1) ... 345s Selecting previously unselected package r-cran-nlme. 345s Preparing to unpack .../045-r-cran-nlme_3.1.164-1_s390x.deb ... 345s Unpacking r-cran-nlme (3.1.164-1) ... 345s Selecting previously unselected package r-cran-matrix. 345s Preparing to unpack .../046-r-cran-matrix_1.6-5-1_s390x.deb ... 345s Unpacking r-cran-matrix (1.6-5-1) ... 345s Selecting previously unselected package r-cran-mgcv. 345s Preparing to unpack .../047-r-cran-mgcv_1.9-1-1_s390x.deb ... 345s Unpacking r-cran-mgcv (1.9-1-1) ... 345s Selecting previously unselected package r-cran-nnet. 345s Preparing to unpack .../048-r-cran-nnet_7.3-19-2_s390x.deb ... 345s Unpacking r-cran-nnet (7.3-19-2) ... 345s Selecting previously unselected package r-cran-boot. 345s Preparing to unpack .../049-r-cran-boot_1.3-30-1_all.deb ... 345s Unpacking r-cran-boot (1.3-30-1) ... 345s Selecting previously unselected package r-cran-pkgkitten. 345s Preparing to unpack .../050-r-cran-pkgkitten_0.2.3-1_all.deb ... 345s Unpacking r-cran-pkgkitten (0.2.3-1) ... 345s Selecting previously unselected package r-cran-rcpp. 345s Preparing to unpack .../051-r-cran-rcpp_1.0.12-1_s390x.deb ... 345s Unpacking r-cran-rcpp (1.0.12-1) ... 345s Selecting previously unselected package r-cran-minqa. 345s Preparing to unpack .../052-r-cran-minqa_1.2.6-1_s390x.deb ... 345s Unpacking r-cran-minqa (1.2.6-1) ... 345s Selecting previously unselected package libnlopt0:s390x. 345s Preparing to unpack .../053-libnlopt0_2.7.1-5build2_s390x.deb ... 345s Unpacking libnlopt0:s390x (2.7.1-5build2) ... 345s Selecting previously unselected package r-cran-brio. 345s Preparing to unpack .../054-r-cran-brio_1.1.4-1_s390x.deb ... 345s Unpacking r-cran-brio (1.1.4-1) ... 345s Selecting previously unselected package r-cran-ps. 345s Preparing to unpack .../055-r-cran-ps_1.7.6-1_s390x.deb ... 345s Unpacking r-cran-ps (1.7.6-1) ... 345s Selecting previously unselected package r-cran-r6. 345s Preparing to unpack .../056-r-cran-r6_2.5.1-1_all.deb ... 345s Unpacking r-cran-r6 (2.5.1-1) ... 345s Selecting previously unselected package r-cran-processx. 345s Preparing to unpack .../057-r-cran-processx_3.8.3-1_s390x.deb ... 345s Unpacking r-cran-processx (3.8.3-1) ... 345s Selecting previously unselected package r-cran-callr. 345s Preparing to unpack .../058-r-cran-callr_3.7.5-1_all.deb ... 345s Unpacking r-cran-callr (3.7.5-1) ... 345s Selecting previously unselected package r-cran-cli. 345s Preparing to unpack .../059-r-cran-cli_3.6.2-1_s390x.deb ... 345s Unpacking r-cran-cli (3.6.2-1) ... 346s Selecting previously unselected package r-cran-desc. 346s Preparing to unpack .../060-r-cran-desc_1.4.3-1_all.deb ... 346s Unpacking r-cran-desc (1.4.3-1) ... 346s Selecting previously unselected package r-cran-digest. 346s Preparing to unpack .../061-r-cran-digest_0.6.34-1_s390x.deb ... 346s Unpacking r-cran-digest (0.6.34-1) ... 346s Selecting previously unselected package r-cran-evaluate. 346s Preparing to unpack .../062-r-cran-evaluate_0.23-1_all.deb ... 346s Unpacking r-cran-evaluate (0.23-1) ... 346s Selecting previously unselected package r-cran-jsonlite. 346s Preparing to unpack .../063-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 346s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 346s Selecting previously unselected package r-cran-glue. 346s Preparing to unpack .../064-r-cran-glue_1.7.0-1_s390x.deb ... 346s Unpacking r-cran-glue (1.7.0-1) ... 346s Selecting previously unselected package r-cran-rlang. 346s Preparing to unpack .../065-r-cran-rlang_1.1.3-1_s390x.deb ... 346s Unpacking r-cran-rlang (1.1.3-1) ... 346s Selecting previously unselected package r-cran-lifecycle. 346s Preparing to unpack .../066-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 346s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 346s Selecting previously unselected package r-cran-magrittr. 346s Preparing to unpack .../067-r-cran-magrittr_2.0.3-1_s390x.deb ... 346s Unpacking r-cran-magrittr (2.0.3-1) ... 346s Selecting previously unselected package r-cran-crayon. 346s Preparing to unpack .../068-r-cran-crayon_1.5.2-1_all.deb ... 346s Unpacking r-cran-crayon (1.5.2-1) ... 346s Selecting previously unselected package r-cran-fs. 346s Preparing to unpack .../069-r-cran-fs_1.6.3+dfsg-1build1_s390x.deb ... 346s Unpacking r-cran-fs (1.6.3+dfsg-1build1) ... 346s Selecting previously unselected package r-cran-pkgbuild. 346s Preparing to unpack .../070-r-cran-pkgbuild_1.4.3-1_all.deb ... 346s Unpacking r-cran-pkgbuild (1.4.3-1) ... 346s Selecting previously unselected package r-cran-rprojroot. 346s Preparing to unpack .../071-r-cran-rprojroot_2.0.4-1_all.deb ... 346s Unpacking r-cran-rprojroot (2.0.4-1) ... 346s Selecting previously unselected package r-cran-withr. 346s Preparing to unpack .../072-r-cran-withr_3.0.0+dfsg-1_all.deb ... 346s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 346s Selecting previously unselected package r-cran-pkgload. 346s Preparing to unpack .../073-r-cran-pkgload_1.3.4-1_all.deb ... 346s Unpacking r-cran-pkgload (1.3.4-1) ... 346s Selecting previously unselected package r-cran-praise. 346s Preparing to unpack .../074-r-cran-praise_1.0.0-4build1_all.deb ... 346s Unpacking r-cran-praise (1.0.0-4build1) ... 346s Selecting previously unselected package r-cran-diffobj. 346s Preparing to unpack .../075-r-cran-diffobj_0.3.5-1_s390x.deb ... 346s Unpacking r-cran-diffobj (0.3.5-1) ... 346s Selecting previously unselected package r-cran-fansi. 346s Preparing to unpack .../076-r-cran-fansi_1.0.5-1_s390x.deb ... 346s Unpacking r-cran-fansi (1.0.5-1) ... 346s Selecting previously unselected package r-cran-utf8. 346s Preparing to unpack .../077-r-cran-utf8_1.2.4-1_s390x.deb ... 346s Unpacking r-cran-utf8 (1.2.4-1) ... 346s Selecting previously unselected package r-cran-vctrs. 346s Preparing to unpack .../078-r-cran-vctrs_0.6.5-1_s390x.deb ... 346s Unpacking r-cran-vctrs (0.6.5-1) ... 346s Selecting previously unselected package r-cran-pillar. 346s Preparing to unpack .../079-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 346s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 346s Selecting previously unselected package r-cran-pkgconfig. 346s Preparing to unpack .../080-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 346s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 346s Selecting previously unselected package r-cran-tibble. 346s Preparing to unpack .../081-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 346s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 346s Selecting previously unselected package r-cran-rematch2. 346s Preparing to unpack .../082-r-cran-rematch2_2.1.2-2build1_all.deb ... 346s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 346s Selecting previously unselected package r-cran-waldo. 346s Preparing to unpack .../083-r-cran-waldo_0.5.2-1build1_all.deb ... 346s Unpacking r-cran-waldo (0.5.2-1build1) ... 346s Selecting previously unselected package r-cran-testthat. 346s Preparing to unpack .../084-r-cran-testthat_3.2.1-1_s390x.deb ... 346s Unpacking r-cran-testthat (3.2.1-1) ... 346s Selecting previously unselected package r-cran-nloptr. 346s Preparing to unpack .../085-r-cran-nloptr_2.0.3-1_s390x.deb ... 346s Unpacking r-cran-nloptr (2.0.3-1) ... 346s Selecting previously unselected package r-cran-rcppeigen. 346s Preparing to unpack .../086-r-cran-rcppeigen_0.3.4.0.0-1_s390x.deb ... 346s Unpacking r-cran-rcppeigen (0.3.4.0.0-1) ... 346s Selecting previously unselected package r-cran-statmod. 346s Preparing to unpack .../087-r-cran-statmod_1.5.0-1_s390x.deb ... 346s Unpacking r-cran-statmod (1.5.0-1) ... 346s Selecting previously unselected package r-cran-lme4. 346s Preparing to unpack .../088-r-cran-lme4_1.1-35.1-4_s390x.deb ... 346s Unpacking r-cran-lme4 (1.1-35.1-4) ... 346s Selecting previously unselected package r-cran-backports. 346s Preparing to unpack .../089-r-cran-backports_1.4.1-1_s390x.deb ... 346s Unpacking r-cran-backports (1.4.1-1) ... 347s Selecting previously unselected package r-cran-generics. 347s Preparing to unpack .../090-r-cran-generics_0.1.3-1_all.deb ... 347s Unpacking r-cran-generics (0.1.3-1) ... 347s Selecting previously unselected package r-cran-tidyselect. 347s Preparing to unpack .../091-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 347s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 347s Selecting previously unselected package r-cran-dplyr. 347s Preparing to unpack .../092-r-cran-dplyr_1.1.4-1_s390x.deb ... 347s Unpacking r-cran-dplyr (1.1.4-1) ... 347s Selecting previously unselected package r-cran-ellipsis. 347s Preparing to unpack .../093-r-cran-ellipsis_0.3.2-2_s390x.deb ... 347s Unpacking r-cran-ellipsis (0.3.2-2) ... 347s Selecting previously unselected package r-cran-purrr. 347s Preparing to unpack .../094-r-cran-purrr_1.0.2-1_s390x.deb ... 347s Unpacking r-cran-purrr (1.0.2-1) ... 347s Selecting previously unselected package r-cran-stringi. 347s Preparing to unpack .../095-r-cran-stringi_1.8.3-1_s390x.deb ... 347s Unpacking r-cran-stringi (1.8.3-1) ... 347s Selecting previously unselected package r-cran-stringr. 347s Preparing to unpack .../096-r-cran-stringr_1.5.1-1_all.deb ... 347s Unpacking r-cran-stringr (1.5.1-1) ... 347s Selecting previously unselected package r-cran-cpp11. 347s Preparing to unpack .../097-r-cran-cpp11_0.4.7-1_all.deb ... 347s Unpacking r-cran-cpp11 (0.4.7-1) ... 347s Selecting previously unselected package r-cran-tidyr. 347s Preparing to unpack .../098-r-cran-tidyr_1.3.1-1_s390x.deb ... 347s Unpacking r-cran-tidyr (1.3.1-1) ... 347s Selecting previously unselected package r-cran-broom. 347s Preparing to unpack .../099-r-cran-broom_1.0.5+dfsg-1_all.deb ... 347s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 347s Selecting previously unselected package r-cran-numderiv. 347s Preparing to unpack .../100-r-cran-numderiv_2016.8-1.1-3_all.deb ... 347s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 347s Selecting previously unselected package r-cran-xfun. 347s Preparing to unpack .../101-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 347s Unpacking r-cran-xfun (0.41+dfsg-1) ... 347s Selecting previously unselected package r-cran-highr. 347s Preparing to unpack .../102-r-cran-highr_0.10+dfsg-1_all.deb ... 347s Unpacking r-cran-highr (0.10+dfsg-1) ... 347s Selecting previously unselected package r-cran-yaml. 347s Preparing to unpack .../103-r-cran-yaml_2.3.8-1_s390x.deb ... 347s Unpacking r-cran-yaml (2.3.8-1) ... 347s Selecting previously unselected package libjs-mathjax. 347s Preparing to unpack .../104-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 347s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 348s Selecting previously unselected package r-cran-knitr. 348s Preparing to unpack .../105-r-cran-knitr_1.45+dfsg-1_all.deb ... 348s Unpacking r-cran-knitr (1.45+dfsg-1) ... 348s Selecting previously unselected package r-cran-pbkrtest. 348s Preparing to unpack .../106-r-cran-pbkrtest_0.5.2-2_all.deb ... 348s Unpacking r-cran-pbkrtest (0.5.2-2) ... 348s Selecting previously unselected package r-cran-sparsem. 348s Preparing to unpack .../107-r-cran-sparsem_1.81-1_s390x.deb ... 348s Unpacking r-cran-sparsem (1.81-1) ... 348s Selecting previously unselected package r-cran-matrixmodels. 348s Preparing to unpack .../108-r-cran-matrixmodels_0.5-3-1_all.deb ... 348s Unpacking r-cran-matrixmodels (0.5-3-1) ... 348s Selecting previously unselected package r-cran-survival. 348s Preparing to unpack .../109-r-cran-survival_3.5-8-1_s390x.deb ... 348s Unpacking r-cran-survival (3.5-8-1) ... 348s Selecting previously unselected package r-cran-matrixstats. 348s Preparing to unpack .../110-r-cran-matrixstats_1.2.0-1_s390x.deb ... 348s Unpacking r-cran-matrixstats (1.2.0-1) ... 348s Selecting previously unselected package r-cran-rcpparmadillo. 348s Preparing to unpack .../111-r-cran-rcpparmadillo_0.12.8.1.0-1_s390x.deb ... 348s Unpacking r-cran-rcpparmadillo (0.12.8.1.0-1) ... 349s Selecting previously unselected package r-cran-gtable. 349s Preparing to unpack .../112-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 349s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 349s Selecting previously unselected package r-cran-isoband. 349s Preparing to unpack .../113-r-cran-isoband_0.2.7-1_s390x.deb ... 349s Unpacking r-cran-isoband (0.2.7-1) ... 349s Selecting previously unselected package r-cran-farver. 349s Preparing to unpack .../114-r-cran-farver_2.1.1-1_s390x.deb ... 349s Unpacking r-cran-farver (2.1.1-1) ... 349s Selecting previously unselected package r-cran-labeling. 349s Preparing to unpack .../115-r-cran-labeling_0.4.3-1_all.deb ... 349s Unpacking r-cran-labeling (0.4.3-1) ... 349s Selecting previously unselected package r-cran-colorspace. 349s Preparing to unpack .../116-r-cran-colorspace_2.1-0+dfsg-1_s390x.deb ... 349s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 349s Selecting previously unselected package r-cran-munsell. 349s Preparing to unpack .../117-r-cran-munsell_0.5.0-2build1_all.deb ... 349s Unpacking r-cran-munsell (0.5.0-2build1) ... 349s Selecting previously unselected package r-cran-rcolorbrewer. 349s Preparing to unpack .../118-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 349s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 349s Selecting previously unselected package r-cran-viridislite. 349s Preparing to unpack .../119-r-cran-viridislite_0.4.2-2_all.deb ... 349s Unpacking r-cran-viridislite (0.4.2-2) ... 349s Selecting previously unselected package r-cran-scales. 349s Preparing to unpack .../120-r-cran-scales_1.3.0-1_all.deb ... 349s Unpacking r-cran-scales (1.3.0-1) ... 349s Selecting previously unselected package r-cran-ggplot2. 349s Preparing to unpack .../121-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 349s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 349s Selecting previously unselected package r-cran-class. 349s Preparing to unpack .../122-r-cran-class_7.3-22-2_s390x.deb ... 349s Unpacking r-cran-class (7.3-22-2) ... 349s Selecting previously unselected package r-cran-proxy. 349s Preparing to unpack .../123-r-cran-proxy_0.4-27-1_s390x.deb ... 349s Unpacking r-cran-proxy (0.4-27-1) ... 349s Selecting previously unselected package r-cran-e1071. 349s Preparing to unpack .../124-r-cran-e1071_1.7-14-1_s390x.deb ... 349s Unpacking r-cran-e1071 (1.7-14-1) ... 349s Selecting previously unselected package r-cran-codetools. 349s Preparing to unpack .../125-r-cran-codetools_0.2-19-1_all.deb ... 349s Unpacking r-cran-codetools (0.2-19-1) ... 349s Selecting previously unselected package r-cran-iterators. 349s Preparing to unpack .../126-r-cran-iterators_1.0.14-1_all.deb ... 349s Unpacking r-cran-iterators (1.0.14-1) ... 349s Selecting previously unselected package r-cran-foreach. 349s Preparing to unpack .../127-r-cran-foreach_1.5.2-1_all.deb ... 349s Unpacking r-cran-foreach (1.5.2-1) ... 349s Selecting previously unselected package r-cran-data.table. 349s Preparing to unpack .../128-r-cran-data.table_1.14.10+dfsg-1_s390x.deb ... 349s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 349s Selecting previously unselected package r-cran-modelmetrics. 349s Preparing to unpack .../129-r-cran-modelmetrics_1.2.2.2-1build1_s390x.deb ... 349s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ... 349s Selecting previously unselected package r-cran-plyr. 349s Preparing to unpack .../130-r-cran-plyr_1.8.9-1_s390x.deb ... 349s Unpacking r-cran-plyr (1.8.9-1) ... 349s Selecting previously unselected package r-cran-proc. 349s Preparing to unpack .../131-r-cran-proc_1.18.5-1_s390x.deb ... 349s Unpacking r-cran-proc (1.18.5-1) ... 349s Selecting previously unselected package r-cran-tzdb. 349s Preparing to unpack .../132-r-cran-tzdb_0.4.0-2_s390x.deb ... 349s Unpacking r-cran-tzdb (0.4.0-2) ... 349s Selecting previously unselected package r-cran-clock. 349s Preparing to unpack .../133-r-cran-clock_0.7.0-1.1_s390x.deb ... 349s Unpacking r-cran-clock (0.7.0-1.1) ... 349s Selecting previously unselected package r-cran-gower. 349s Preparing to unpack .../134-r-cran-gower_1.0.1-1_s390x.deb ... 349s Unpacking r-cran-gower (1.0.1-1) ... 349s Selecting previously unselected package r-cran-hardhat. 349s Preparing to unpack .../135-r-cran-hardhat_1.3.1+dfsg-1_all.deb ... 349s Unpacking r-cran-hardhat (1.3.1+dfsg-1) ... 349s Selecting previously unselected package r-cran-rpart. 349s Preparing to unpack .../136-r-cran-rpart_4.1.23-1_s390x.deb ... 349s Unpacking r-cran-rpart (4.1.23-1) ... 349s Selecting previously unselected package r-cran-shape. 349s Preparing to unpack .../137-r-cran-shape_1.4.6-1_all.deb ... 349s Unpacking r-cran-shape (1.4.6-1) ... 349s Selecting previously unselected package r-cran-diagram. 349s Preparing to unpack .../138-r-cran-diagram_1.6.5-2_all.deb ... 349s Unpacking r-cran-diagram (1.6.5-2) ... 349s Selecting previously unselected package r-cran-kernsmooth. 349s Preparing to unpack .../139-r-cran-kernsmooth_2.23-22-1_s390x.deb ... 349s Unpacking r-cran-kernsmooth (2.23-22-1) ... 349s Selecting previously unselected package r-cran-globals. 349s Preparing to unpack .../140-r-cran-globals_0.16.2-1_all.deb ... 349s Unpacking r-cran-globals (0.16.2-1) ... 350s Selecting previously unselected package r-cran-listenv. 350s Preparing to unpack .../141-r-cran-listenv_0.9.1+dfsg-1_all.deb ... 350s Unpacking r-cran-listenv (0.9.1+dfsg-1) ... 350s Selecting previously unselected package r-cran-parallelly. 350s Preparing to unpack .../142-r-cran-parallelly_1.37.1-1_s390x.deb ... 350s Unpacking r-cran-parallelly (1.37.1-1) ... 350s Selecting previously unselected package r-cran-future. 350s Preparing to unpack .../143-r-cran-future_1.33.1+dfsg-1_all.deb ... 350s Unpacking r-cran-future (1.33.1+dfsg-1) ... 350s Selecting previously unselected package r-cran-future.apply. 350s Preparing to unpack .../144-r-cran-future.apply_1.11.1+dfsg-1_all.deb ... 350s Unpacking r-cran-future.apply (1.11.1+dfsg-1) ... 350s Selecting previously unselected package r-cran-progressr. 350s Preparing to unpack .../145-r-cran-progressr_0.14.0-1_all.deb ... 350s Unpacking r-cran-progressr (0.14.0-1) ... 350s Selecting previously unselected package r-cran-squarem. 350s Preparing to unpack .../146-r-cran-squarem_2021.1-1_all.deb ... 350s Unpacking r-cran-squarem (2021.1-1) ... 350s Selecting previously unselected package r-cran-lava. 350s Preparing to unpack .../147-r-cran-lava_1.7.3+dfsg-1_all.deb ... 350s Unpacking r-cran-lava (1.7.3+dfsg-1) ... 350s Selecting previously unselected package r-cran-prodlim. 350s Preparing to unpack .../148-r-cran-prodlim_2023.08.28-1_s390x.deb ... 350s Unpacking r-cran-prodlim (2023.08.28-1) ... 350s Selecting previously unselected package r-cran-ipred. 350s Preparing to unpack .../149-r-cran-ipred_0.9-14-1_s390x.deb ... 350s Unpacking r-cran-ipred (0.9-14-1) ... 350s Selecting previously unselected package r-cran-timechange. 350s Preparing to unpack .../150-r-cran-timechange_0.3.0-1_s390x.deb ... 350s Unpacking r-cran-timechange (0.3.0-1) ... 350s Selecting previously unselected package r-cran-lubridate. 350s Preparing to unpack .../151-r-cran-lubridate_1.9.3+dfsg-1_s390x.deb ... 350s Unpacking r-cran-lubridate (1.9.3+dfsg-1) ... 350s Selecting previously unselected package r-cran-timedate. 350s Preparing to unpack .../152-r-cran-timedate_4032.109-1_s390x.deb ... 350s Unpacking r-cran-timedate (4032.109-1) ... 350s Selecting previously unselected package r-cran-recipes. 350s Preparing to unpack .../153-r-cran-recipes_1.0.9+dfsg-1_all.deb ... 350s Unpacking r-cran-recipes (1.0.9+dfsg-1) ... 350s Selecting previously unselected package r-cran-reshape2. 350s Preparing to unpack .../154-r-cran-reshape2_1.4.4-2build1_s390x.deb ... 350s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 350s Selecting previously unselected package r-cran-caret. 350s Preparing to unpack .../155-r-cran-caret_6.0-94+dfsg-1_s390x.deb ... 350s Unpacking r-cran-caret (6.0-94+dfsg-1) ... 350s Selecting previously unselected package r-cran-conquer. 350s Preparing to unpack .../156-r-cran-conquer_1.3.3-1_s390x.deb ... 350s Unpacking r-cran-conquer (1.3.3-1) ... 350s Selecting previously unselected package r-cran-quantreg. 350s Preparing to unpack .../157-r-cran-quantreg_5.97-1_s390x.deb ... 350s Unpacking r-cran-quantreg (5.97-1) ... 350s Selecting previously unselected package r-cran-sp. 350s Preparing to unpack .../158-r-cran-sp_1%3a2.1-2+dfsg-1_s390x.deb ... 350s Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... 350s Selecting previously unselected package r-cran-foreign. 350s Preparing to unpack .../159-r-cran-foreign_0.8.86-1_s390x.deb ... 350s Unpacking r-cran-foreign (0.8.86-1) ... 350s Selecting previously unselected package r-cran-maptools. 350s Preparing to unpack .../160-r-cran-maptools_1%3a1.1-8+dfsg-1_s390x.deb ... 350s Unpacking r-cran-maptools (1:1.1-8+dfsg-1) ... 350s Selecting previously unselected package r-cran-forcats. 350s Preparing to unpack .../161-r-cran-forcats_1.0.0-1_all.deb ... 350s Unpacking r-cran-forcats (1.0.0-1) ... 350s Selecting previously unselected package r-cran-hms. 350s Preparing to unpack .../162-r-cran-hms_1.1.3-1_all.deb ... 350s Unpacking r-cran-hms (1.1.3-1) ... 350s Selecting previously unselected package r-cran-clipr. 350s Preparing to unpack .../163-r-cran-clipr_0.8.0-1_all.deb ... 350s Unpacking r-cran-clipr (0.8.0-1) ... 350s Selecting previously unselected package r-cran-bit. 350s Preparing to unpack .../164-r-cran-bit_4.0.5-1_s390x.deb ... 350s Unpacking r-cran-bit (4.0.5-1) ... 350s Selecting previously unselected package r-cran-bit64. 350s Preparing to unpack .../165-r-cran-bit64_4.0.5-1_s390x.deb ... 350s Unpacking r-cran-bit64 (4.0.5-1) ... 350s Selecting previously unselected package r-cran-prettyunits. 350s Preparing to unpack .../166-r-cran-prettyunits_1.2.0-1_all.deb ... 350s Unpacking r-cran-prettyunits (1.2.0-1) ... 350s Selecting previously unselected package r-cran-progress. 350s Preparing to unpack .../167-r-cran-progress_1.2.3-1_all.deb ... 350s Unpacking r-cran-progress (1.2.3-1) ... 350s Selecting previously unselected package r-cran-vroom. 350s Preparing to unpack .../168-r-cran-vroom_1.6.5-1_s390x.deb ... 350s Unpacking r-cran-vroom (1.6.5-1) ... 350s Selecting previously unselected package r-cran-readr. 350s Preparing to unpack .../169-r-cran-readr_2.1.5-1_s390x.deb ... 350s Unpacking r-cran-readr (2.1.5-1) ... 350s Selecting previously unselected package r-cran-haven. 350s Preparing to unpack .../170-r-cran-haven_2.5.4-1_s390x.deb ... 350s Unpacking r-cran-haven (2.5.4-1) ... 351s Selecting previously unselected package r-cran-curl. 351s Preparing to unpack .../171-r-cran-curl_5.2.0+dfsg-1build1_s390x.deb ... 351s Unpacking r-cran-curl (5.2.0+dfsg-1build1) ... 351s Selecting previously unselected package r-cran-rematch. 351s Preparing to unpack .../172-r-cran-rematch_2.0.0-1_all.deb ... 351s Unpacking r-cran-rematch (2.0.0-1) ... 351s Selecting previously unselected package r-cran-cellranger. 351s Preparing to unpack .../173-r-cran-cellranger_1.1.0-3_all.deb ... 351s Unpacking r-cran-cellranger (1.1.0-3) ... 351s Selecting previously unselected package r-cran-readxl. 351s Preparing to unpack .../174-r-cran-readxl_1.4.3-1_s390x.deb ... 351s Unpacking r-cran-readxl (1.4.3-1) ... 351s Selecting previously unselected package r-cran-writexl. 351s Preparing to unpack .../175-r-cran-writexl_1.5.0-1_s390x.deb ... 351s Unpacking r-cran-writexl (1.5.0-1) ... 351s Selecting previously unselected package r-cran-r.methodss3. 351s Preparing to unpack .../176-r-cran-r.methodss3_1.8.2-1_all.deb ... 351s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 351s Selecting previously unselected package r-cran-r.oo. 351s Preparing to unpack .../177-r-cran-r.oo_1.26.0-1_all.deb ... 351s Unpacking r-cran-r.oo (1.26.0-1) ... 351s Selecting previously unselected package r-cran-r.utils. 351s Preparing to unpack .../178-r-cran-r.utils_2.12.3-1_all.deb ... 351s Unpacking r-cran-r.utils (2.12.3-1) ... 351s Selecting previously unselected package r-cran-zip. 351s Preparing to unpack .../179-r-cran-zip_2.3.1-1_s390x.deb ... 351s Unpacking r-cran-zip (2.3.1-1) ... 351s Selecting previously unselected package r-cran-openxlsx. 351s Preparing to unpack .../180-r-cran-openxlsx_4.2.5.2-1_s390x.deb ... 351s Unpacking r-cran-openxlsx (4.2.5.2-1) ... 351s Selecting previously unselected package r-cran-rio. 351s Preparing to unpack .../181-r-cran-rio_1.0.1-1_all.deb ... 351s Unpacking r-cran-rio (1.0.1-1) ... 351s Selecting previously unselected package r-cran-car. 351s Preparing to unpack .../182-r-cran-car_3.1-2-2_all.deb ... 351s Unpacking r-cran-car (3.1-2-2) ... 351s Selecting previously unselected package r-cran-zoo. 351s Preparing to unpack .../183-r-cran-zoo_1.8-12-2_s390x.deb ... 351s Unpacking r-cran-zoo (1.8-12-2) ... 351s Selecting previously unselected package r-cran-lmtest. 351s Preparing to unpack .../184-r-cran-lmtest_0.9.40-1_s390x.deb ... 351s Unpacking r-cran-lmtest (0.9.40-1) ... 351s Selecting previously unselected package r-cran-sandwich. 351s Preparing to unpack .../185-r-cran-sandwich_3.1-0-1_all.deb ... 351s Unpacking r-cran-sandwich (3.1-0-1) ... 351s Selecting previously unselected package r-cran-formula. 351s Preparing to unpack .../186-r-cran-formula_1.2-5-1_all.deb ... 351s Unpacking r-cran-formula (1.2-5-1) ... 351s Selecting previously unselected package r-cran-aer. 351s Preparing to unpack .../187-r-cran-aer_1.2-12-1_all.deb ... 351s Unpacking r-cran-aer (1.2-12-1) ... 351s Selecting previously unselected package r-cran-blob. 351s Preparing to unpack .../188-r-cran-blob_1.2.4-1_all.deb ... 351s Unpacking r-cran-blob (1.2.4-1) ... 351s Selecting previously unselected package r-cran-fastmap. 351s Preparing to unpack .../189-r-cran-fastmap_1.1.1-1_s390x.deb ... 351s Unpacking r-cran-fastmap (1.1.1-1) ... 351s Selecting previously unselected package r-cran-cachem. 351s Preparing to unpack .../190-r-cran-cachem_1.0.8-1_s390x.deb ... 351s Unpacking r-cran-cachem (1.0.8-1) ... 351s Selecting previously unselected package r-cran-dbi. 351s Preparing to unpack .../191-r-cran-dbi_1.2.2-1_all.deb ... 351s Unpacking r-cran-dbi (1.2.2-1) ... 351s Selecting previously unselected package r-cran-memoise. 351s Preparing to unpack .../192-r-cran-memoise_2.0.1-1_all.deb ... 351s Unpacking r-cran-memoise (2.0.1-1) ... 351s Selecting previously unselected package r-cran-mitools. 351s Preparing to unpack .../193-r-cran-mitools_2.4-2build1_all.deb ... 351s Unpacking r-cran-mitools (2.4-2build1) ... 351s Selecting previously unselected package r-cran-plogr. 351s Preparing to unpack .../194-r-cran-plogr_0.2.0-3build1_all.deb ... 351s Unpacking r-cran-plogr (0.2.0-3build1) ... 351s Selecting previously unselected package r-cran-rsqlite. 351s Preparing to unpack .../195-r-cran-rsqlite_2.3.4-1_s390x.deb ... 351s Unpacking r-cran-rsqlite (2.3.4-1) ... 351s Selecting previously unselected package r-cran-survey. 351s Preparing to unpack .../196-r-cran-survey_4.2-1-1_all.deb ... 351s Unpacking r-cran-survey (4.2-1-1) ... 351s Selecting previously unselected package autopkgtest-satdep. 351s Preparing to unpack .../197-1-autopkgtest-satdep.deb ... 351s Unpacking autopkgtest-satdep (0) ... 351s Setting up libgraphite2-3:s390x (1.3.14-2) ... 351s Setting up libpixman-1-0:s390x (0.42.2-1) ... 351s Setting up libpaper1:s390x (1.1.29) ... 351s 351s Creating config file /etc/papersize with new version 352s Setting up fontconfig (2.15.0-1.1ubuntu1) ... 354s Regenerating fonts cache... done. 354s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 354s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 354s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 354s Setting up libdatrie1:s390x (0.2.13-3) ... 354s Setting up libxcb-render0:s390x (1.15-1) ... 354s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 354s Setting up unzip (6.0-28ubuntu3) ... 354s Setting up x11-common (1:7.7+23ubuntu2) ... 354s Setting up libnlopt0:s390x (2.7.1-5build2) ... 354s Setting up libxcb-shm0:s390x (1.15-1) ... 354s Setting up libpaper-utils (1.1.29) ... 354s Setting up libgomp1:s390x (14-20240315-1ubuntu1) ... 354s Setting up libcairo2:s390x (1.18.0-1ubuntu1) ... 354s Setting up zip (3.0-13) ... 354s Setting up libblas3:s390x (3.12.0-3) ... 354s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 354s Setting up libtcl8.6:s390x (8.6.14+dfsg-1) ... 354s Setting up libgfortran5:s390x (14-20240315-1ubuntu1) ... 354s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 354s Setting up libharfbuzz0b:s390x (8.3.0-2build1) ... 354s Setting up libthai-data (0.1.29-2) ... 354s Setting up libxss1:s390x (1:1.2.3-1build2) ... 354s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 354s Setting up node-normalize.css (8.0.1-5) ... 354s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 354s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 354s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 354s Setting up libice6:s390x (2:1.0.10-1build2) ... 354s Setting up liblapack3:s390x (3.12.0-3) ... 354s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 354s Setting up libxft2:s390x (2.3.6-1) ... 354s Setting up libtk8.6:s390x (8.6.14-1) ... 354s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 354s Setting up libthai0:s390x (0.1.29-2) ... 354s Setting up libsm6:s390x (2:1.2.3-1build2) ... 354s Setting up libpango-1.0-0:s390x (1.52.1+ds-1) ... 354s Setting up libxt6t64:s390x (1:1.2.1-1.2) ... 354s Setting up libpangoft2-1.0-0:s390x (1.52.1+ds-1) ... 354s Setting up libpangocairo-1.0-0:s390x (1.52.1+ds-1) ... 354s Setting up r-base-core (4.3.3-2build1) ... 354s 354s Creating config file /etc/R/Renviron with new version 354s Setting up r-cran-crayon (1.5.2-1) ... 354s Setting up r-cran-squarem (2021.1-1) ... 354s Setting up r-cran-labeling (0.4.3-1) ... 354s Setting up r-cran-lattice (0.22-5-1) ... 354s Setting up r-cran-ps (1.7.6-1) ... 354s Setting up r-cran-nlme (3.1.164-1) ... 354s Setting up r-cran-farver (2.1.1-1) ... 354s Setting up r-cran-formula (1.2-5-1) ... 354s Setting up r-cran-zip (2.3.1-1) ... 354s Setting up r-cran-viridislite 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362s (Reading database ... 102697 files and directories currently installed.) 362s Removing autopkgtest-satdep (0) ... 363s autopkgtest [02:26:36]: test run-unit-test: [----------------------- 363s BEGIN TEST 3stage2phase.R 363s 363s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 363s Copyright (C) 2024 The R Foundation for Statistical Computing 363s Platform: s390x-ibm-linux-gnu (64-bit) 363s 363s R is free software and comes with ABSOLUTELY NO WARRANTY. 363s You are welcome to redistribute it under certain conditions. 363s Type 'license()' or 'licence()' for distribution details. 363s 363s R is a collaborative project with many contributors. 363s Type 'contributors()' for more information and 363s 'citation()' on how to cite R or R packages in publications. 363s 363s Type 'demo()' for some demos, 'help()' for on-line help, or 363s 'help.start()' for an HTML browser interface to help. 363s Type 'q()' to quit R. 363s 363s > ## simulated data with three-stage sample at phase 1, SRS at phase 2 363s > ## motivated by dietary biomarker substudy in HCHS 363s > 363s > library(survey) 363s Loading required package: grid 363s Loading required package: Matrix 365s Loading required package: survival 365s > 365s > 365s Attaching package: 'survey' 365s 365s The following object is masked from 'package:graphics': 365s 365s dotchart 365s 365s load("simdata1.RData") 365s > 365s > twophase.full = twophase(id=list(~block+house+ind,~1), 365s + strata=list(~strat,NULL), 365s + probs=list(~P.block+P.house+P.ind,NULL), 365s + subset=~phase2, 365s + data=simdata1,method='full') 365s > 365s > twophase.approx = twophase(id=list(~block+house+ind,~1), 365s + strata=list(~strat,NULL), 365s + probs=list(~P.block+P.house+P.ind,NULL), 365s + subset=~phase2, 365s + data=simdata1,method='approx') 365s > 365s > twophase.rep = twophase(id=list(~block,~1), 365s + strata=list(~strat,NULL), 365s + probs=list(~I(P.block*P.house*P.ind),NULL), 365s + subset=~phase2, 365s + data=simdata1,method='full') 365s > 365s > 365s > twophase.repapprox = twophase(id=list(~block,~1), 365s + strata=list(~strat,NULL), 365s + probs=list(~I(P.block*P.house*P.ind),NULL), 365s + subset=~phase2, 365s + data=simdata1,method='approx') 365s > 365s > 365s > svymean(~age, twophase.full) 365s mean SE 365s age 41.116 0.8114 365s > svymean(~age, twophase.approx) 365s mean SE 365s age 41.116 0.6693 365s > svymean(~age, twophase.rep) 365s mean SE 365s age 41.116 0.784 365s > svymean(~age, twophase.repapprox) 365s mean SE 365s age 41.116 0.6592 365s > 365s BEGIN TEST DBIcheck.R 365s 365s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 365s Copyright (C) 2024 The R Foundation for Statistical Computing 365s Platform: s390x-ibm-linux-gnu (64-bit) 365s 365s R is free software and comes with ABSOLUTELY NO WARRANTY. 365s You are welcome to redistribute it under certain conditions. 365s Type 'license()' or 'licence()' for distribution details. 365s 365s R is a collaborative project with many contributors. 365s Type 'contributors()' for more information and 365s 'citation()' on how to cite R or R packages in publications. 365s 365s Type 'demo()' for some demos, 'help()' for on-line help, or 365s 'help.start()' for an HTML browser interface to help. 365s Type 'q()' to quit R. 365s 365s > 365s > library(survey) 365s Loading required package: grid 365s Loading required package: Matrix 366s Loading required package: survival 367s 367s Attaching package: 'survey' 367s 367s > The following object is masked from 'package:graphics': 367s 367s dotchart 367s 367s library(RSQLite) 367s > 367s > data(api) 367s > apiclus1$api_stu<-apiclus1$api.stu 367s > apiclus1$comp_imp<-apiclus1$comp.imp 367s > dclus1<-svydesign(id=~dnum, weights=~pw, fpc=~fpc,data=apiclus1) 367s > dbclus1<-svydesign(id=~dnum, weights=~pw, fpc=~fpc, 367s + data="apiclus1",dbtype="SQLite", dbname=system.file("api.db",package="survey")) 367s > 367s > m<-svymean(~api00+stype,dclus1) 367s > m.db<-svymean(~api00+stype, dbclus1) 367s > all.equal(coef(m),coef(m.db)) 367s [1] TRUE 367s > all.equal(vcov(m), vcov(m.db)) 367s [1] TRUE 367s > 367s > r<-svyratio(~api_stu, ~enroll, design=dclus1) 367s > r.db<-svyratio(~api_stu, ~enroll, design=dbclus1) 367s > all.equal(coef(r), coef(r.db)) 367s [1] TRUE 367s > all.equal(SE(r), SE(r.db)) 367s [1] TRUE 367s > 367s > b<-svyby(~api99+api00,~stype, design=dclus1, svymean, deff=TRUE) 367s > b.db<-svyby(~api99+api00,~stype, design=dbclus1,svymean, deff=TRUE) 367s > all.equal(coef(b), coef(b.db)) 367s [1] TRUE 367s > all.equal(SE(b), SE(b.db)) 367s [1] TRUE 367s > all.equal(deff(b), deff(b.db)) 367s [1] TRUE 367s > 367s > l<-svyglm(api00~api99+mobility, design=dclus1) 367s > l.db<-svyglm(api00~api99+mobility, design=dbclus1) 367s > all.equal(coef(l),coef(l.db)) 367s [1] TRUE 367s > all.equal(vcov(l), vcov(l.db)) 367s [1] TRUE 367s > 367s > dclus1<-update(dclus1, apidiff=api00-api99) 367s > dclus1<-update(dclus1, apipct= apidiff/api99) 367s > dbclus1<-update(dbclus1, apidiff=api00-api99) 367s > dbclus1<-update(dbclus1, apipct= apidiff/api99) 367s > 367s > u<-svymean(~api00+apidiff+apipct, dclus1) 367s > u.db<-svymean(~api00+apidiff+apipct, dbclus1) 367s > all.equal(u, u.db) 367s [1] TRUE 367s > 367s > all.equal(nrow(dclus1),nrow(dbclus1)) 367s [1] TRUE 367s > all.equal(nrow(subset(dclus1,stype=="E")), 367s + nrow(subset(dbclus1,stype=="E"))) 367s [1] "Mean relative difference: 0.2708333" 367s > 367s > ## replicate weights 367s > rclus1<-as.svrepdesign(dclus1) 367s > db_rclus1<-svrepdesign(weights=~pw, repweights="wt[1-9]+", type="JK1", scale=(1-15/757)*14/15, 367s + data="apiclus1rep",dbtype="SQLite", dbname=system.file("api.db",package="survey"),combined.weights=FALSE) 367s > m<-svymean(~api00+api99,rclus1) 367s > m.db<-svymean(~api00+api99,db_rclus1) 367s > all.equal(m,m.db) 367s [1] TRUE 367s > 367s > summary(db_rclus1) 367s DB-backed replicate weight design 367s Call: svrepdesign(weights = ~pw, repweights = "wt[1-9]+", type = "JK1", 367s scale = (1 - 15/757) * 14/15, data = "apiclus1rep", dbtype = "SQLite", 367s dbname = system.file("api.db", package = "survey"), combined.weights = FALSE) 367s Unstratified cluster jacknife (JK1) with 15 replicates. 367s Variables: 367s [1] "row_names" "cds" "stype" "name" "sname" 367s [6] "snum" "dname" "dnum" "cname" "cnum" 367s [11] "flag" "pcttest" "api00" "api99" "target" 367s [16] "growth" "sch_wide" "comp_imp" "both" "awards" 367s [21] "meals" "ell" "yr_rnd" "mobility" "acs_k3" 367s [26] "acs_46" "acs_core" "pct_resp" "not_hsg" "hsg" 367s [31] "some_col" "col_grad" "grad_sch" "avg_ed" "full__1" 367s [36] "emer" "enroll" "api_stu" "fpc" "pw" 367s [41] "row_names:1" "wt1" "wt2" "wt3" "wt4" 367s [46] "wt5" "wt6" "wt7" "wt8" "wt9" 367s [51] "wt10" "wt11" "wt12" "wt13" "wt14" 367s [56] "wt15" 367s > 367s > s<-svymean(~api00, subset(rclus1, comp_imp=="Yes")) 367s > s.db<-svymean(~api00, subset(db_rclus1, comp_imp=="Yes")) 367s > all.equal(s,s.db) 367s [1] TRUE 367s > 367s BEGIN TEST anova-svycoxph.R 367s 367s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 367s Copyright (C) 2024 The R Foundation for Statistical Computing 367s Platform: s390x-ibm-linux-gnu (64-bit) 367s 367s R is free software and comes with ABSOLUTELY NO WARRANTY. 367s You are welcome to redistribute it under certain conditions. 367s Type 'license()' or 'licence()' for distribution details. 367s 367s R is a collaborative project with many contributors. 367s Type 'contributors()' for more information and 367s 'citation()' on how to cite R or R packages in publications. 367s 367s Type 'demo()' for some demos, 'help()' for on-line help, or 367s 'help.start()' for an HTML browser interface to help. 367s Type 'q()' to quit R. 367s 367s > 367s > library(survey) 367s Loading required package: grid 367s Loading required package: Matrix 368s Loading required package: survival 368s 368s Attaching package: 'survey' 368s 368s > The following object is masked from 'package:graphics': 368s 368s dotchart 368s 368s example(svycoxph, ask=FALSE) 368s 368s svycxp> ## Somewhat unrealistic example of nonresponse bias. 368s svycxp> data(pbc, package="survival") 368s 368s svycxp> pbc$randomized<-with(pbc, !is.na(trt) & trt>0) 368s 368s svycxp> biasmodel<-glm(randomized~age*edema,data=pbc,family=binomial) 368s 368s svycxp> pbc$randprob<-fitted(biasmodel) 368s 368s svycxp> if (is.null(pbc$albumin)) pbc$albumin<-pbc$alb ##pre2.9.0 368s 368s svycxp> dpbc<-svydesign(id=~1, prob=~randprob, strata=~edema, data=subset(pbc,randomized)) 368s 368s svycxp> rpbc<-as.svrepdesign(dpbc) 368s 368s svycxp> (model<-svycoxph(Surv(time,status>0)~log(bili)+protime+albumin,design=dpbc)) 368s Call: 368s svycoxph(formula = Surv(time, status > 0) ~ log(bili) + protime + 368s albumin, design = dpbc) 368s 368s coef exp(coef) se(coef) robust se z p 368s log(bili) 0.88592 2.42522 0.09140 0.09048 9.791 < 2e-16 368s protime 0.24487 1.27745 0.07825 0.08122 3.015 0.00257 368s albumin -1.04298 0.35240 0.21211 0.20454 -5.099 3.41e-07 368s 368s Likelihood ratio test= on 3 df, p= 368s n= 312, number of events= 144 368s 368s svycxp> svycoxph(Surv(time,status>0)~log(bili)+protime+albumin,design=rpbc) 369s Call: 369s svycoxph.svyrep.design(formula = Surv(time, status > 0) ~ log(bili) + 369s protime + albumin, design = rpbc) 369s 369s coef exp(coef) se(coef) z p 369s log(bili) 0.88592 2.42522 0.09838 9.005 < 2e-16 369s protime 0.24487 1.27745 0.09373 2.612 0.00899 369s albumin -1.04298 0.35240 0.21966 -4.748 2.05e-06 369s 369s Likelihood ratio test=NA on 3 df, p=NA 369s n= 312, number of events= 144 369s 369s svycxp> s<-predict(model,se=TRUE, type="curve", 369s svycxp+ newdata=data.frame(bili=c(3,9), protime=c(10,10), albumin=c(3.5,3.5))) 369s 369s svycxp> plot(s[[1]],ci=TRUE,col="sienna") 369s 369s svycxp> lines(s[[2]], ci=TRUE,col="royalblue") 369s 369s svycxp> quantile(s[[1]], ci=TRUE) 369s 0.75 0.5 0.25 369s 1435 2503 3574 369s attr(,"ci") 369s 0.025 0.975 369s 0.75 1217 1786 369s 0.5 2256 3170 369s 0.25 3222 Inf 369s 369s svycxp> confint(s[[2]], parm=365*(1:5)) 369s 0.025 0.975 369s 365 0.8375139 0.9453781 369s 730 0.7382750 0.8999016 369s 1095 0.4784105 0.7478460 369s 1460 0.3192009 0.6206764 369s 1825 0.2149475 0.5292978 369s > m<-update(model, .~.+I(protime^2)) 369s > a<-anova(m,model) 369s > b<-anova(m, model,force=TRUE) 369s > stopifnot(isTRUE(all.equal(b[2:6],a[c(3,4,6,7,8)]))) 369s > 369s BEGIN TEST api.R 369s 369s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 369s Copyright (C) 2024 The R Foundation for Statistical Computing 369s Platform: s390x-ibm-linux-gnu (64-bit) 369s 369s R is free software and comes with ABSOLUTELY NO WARRANTY. 369s You are welcome to redistribute it under certain conditions. 369s Type 'license()' or 'licence()' for distribution details. 369s 369s R is a collaborative project with many contributors. 369s Type 'contributors()' for more information and 369s 'citation()' on how to cite R or R packages in publications. 369s 369s Type 'demo()' for some demos, 'help()' for on-line help, or 369s 'help.start()' for an HTML browser interface to help. 369s Type 'q()' to quit R. 369s 369s > library(survey) 369s Loading required package: grid 369s Loading required package: Matrix 370s Loading required package: survival 370s 370s Attaching package: 'survey' 370s 370s The following object is masked from 'package:graphics': 370s 370s dotchart 370s 370s > options(survey.replicates.mse=TRUE) 370s > example(api) 370s 370s api> library(survey) 370s 370s api> data(api) 370s 370s api> mean(apipop$api00) 370s [1] 664.7126 370s 370s api> sum(apipop$enroll, na.rm=TRUE) 370s [1] 3811472 370s 370s api> #stratified sample 370s api> dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 370s 370s api> summary(dstrat) 370s Stratified Independent Sampling design 370s dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 370s Probabilities: 370s Min. 1st Qu. Median Mean 3rd Qu. Max. 370s 0.02262 0.02262 0.03587 0.04014 0.05339 0.06623 370s Stratum Sizes: 370s E H M 370s obs 100 50 50 370s design.PSU 100 50 50 370s actual.PSU 100 50 50 370s Population stratum sizes (PSUs): 370s E H M 370s 4421 755 1018 370s Data variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "pw" "fpc" 370s 370s api> svymean(~api00, dstrat) 370s mean SE 370s api00 662.29 9.4089 370s 370s api> svytotal(~enroll, dstrat, na.rm=TRUE) 370s total SE 370s enroll 3687178 114642 370s 370s api> # one-stage cluster sample 370s api> dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 370s 370s api> summary(dclus1) 370s 1 - level Cluster Sampling design 370s With (15) clusters. 370s dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 370s Probabilities: 370s Min. 1st Qu. Median Mean 3rd Qu. Max. 370s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 370s Population size (PSUs): 757 370s Data variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "fpc" "pw" 370s 370s api> svymean(~api00, dclus1) 370s mean SE 370s api00 644.17 23.542 370s 370s api> svytotal(~enroll, dclus1, na.rm=TRUE) 370s total SE 370s enroll 3404940 932235 370s 370s api> # two-stage cluster sample 370s api> dclus2<-svydesign(id=~dnum+snum, fpc=~fpc1+fpc2, data=apiclus2) 370s 370s api> summary(dclus2) 370s 2 - level Cluster Sampling design 370s With (40, 126) clusters. 370s dclus2<-svydesign(id=~dnum+snum, fpc=~fpc1+fpc2, data=apiclus2) 370s Probabilities: 370s Min. 1st Qu. Median Mean 3rd Qu. Max. 370s 0.003669 0.037743 0.052840 0.042390 0.052840 0.052840 370s Population size (PSUs): 757 370s Data variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "pw" "fpc1" "fpc2" 370s 370s api> svymean(~api00, dclus2) 370s mean SE 370s api00 670.81 30.099 370s 370s api> svytotal(~enroll, dclus2, na.rm=TRUE) 370s total SE 370s enroll 2639273 799638 370s 370s api> # two-stage `with replacement' 370s api> dclus2wr<-svydesign(id=~dnum+snum, weights=~pw, data=apiclus2) 370s 370s api> summary(dclus2wr) 370s 2 - level Cluster Sampling design (with replacement) 370s With (40, 126) clusters. 370s dclus2wr<-svydesign(id=~dnum+snum, weights=~pw, data=apiclus2) 370s Probabilities: 370s Min. 1st Qu. Median Mean 3rd Qu. Max. 370s 0.003669 0.037743 0.052840 0.042390 0.052840 0.052840 370s Data variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "pw" "fpc1" "fpc2" 370s 370s api> svymean(~api00, dclus2wr) 370s mean SE 370s api00 670.81 30.712 370s 370s api> svytotal(~enroll, dclus2wr, na.rm=TRUE) 370s total SE 370s enroll 2639273 820261 370s 370s api> # convert to replicate weights 370s api> rclus1<-as.svrepdesign(dclus1) 370s 370s api> summary(rclus1) 370s Call: as.svrepdesign.default(dclus1) 370s Unstratified cluster jacknife (JK1) with 15 replicates and MSE variances. 370s Variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "fpc" "pw" 370s 370s api> svymean(~api00, rclus1) 370s mean SE 370s api00 644.17 26.335 370s 370s api> svytotal(~enroll, rclus1, na.rm=TRUE) 370s total SE 370s enroll 3404940 932235 370s 370s api> # post-stratify on school type 370s api> pop.types<-xtabs(~stype, data=apipop) 370s 370s api> rclus1p<-postStratify(rclus1, ~stype, pop.types) 370s 370s api> dclus1p<-postStratify(dclus1, ~stype, pop.types) 370s 370s api> summary(dclus1p) 370s 1 - level Cluster Sampling design 370s With (15) clusters. 370s dclus1p<-postStratify(dclus1, ~stype, pop.types) 370s Probabilities: 370s Min. 1st Qu. Median Mean 3rd Qu. Max. 370s 0.01854 0.03257 0.03257 0.03040 0.03257 0.03257 370s Population size (PSUs): 757 370s Data variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "fpc" "pw" 370s 370s api> summary(rclus1p) 370s Call: rclus1p<-postStratify(rclus1, ~stype, pop.types) 370s Unstratified cluster jacknife (JK1) with 15 replicates and MSE variances. 370s Variables: 370s [1] "cds" "stype" "name" "sname" "snum" "dname" 370s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 370s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 370s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 370s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 370s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 370s [37] "api.stu" "fpc" "pw" 370s 370s api> svymean(~api00, dclus1p) 370s mean SE 370s api00 642.31 23.921 370s 370s api> svytotal(~enroll, dclus1p, na.rm=TRUE) 370s total SE 370s enroll 3680893 406293 370s 370s api> svymean(~api00, rclus1p) 370s mean SE 370s api00 642.31 26.936 370s 370s api> svytotal(~enroll, rclus1p, na.rm=TRUE) 370s total SE 370s enroll 3680893 473434 370s > 370s > options(survey.replicates.mse=FALSE) 370s > example(api) 370s 370s api> library(survey) 370s 370s api> data(api) 370s 370s api> mean(apipop$api00) 370s [1] 664.7126 370s 370s api> sum(apipop$enroll, na.rm=TRUE) 370s [1] 3811472 370s 370s api> #stratified sample 370s api> dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 371s 371s api> summary(dstrat) 371s Stratified Independent Sampling design 371s dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 371s Probabilities: 371s Min. 1st Qu. Median Mean 3rd Qu. Max. 371s 0.02262 0.02262 0.03587 0.04014 0.05339 0.06623 371s Stratum Sizes: 371s E H M 371s obs 100 50 50 371s design.PSU 100 50 50 371s actual.PSU 100 50 50 371s Population stratum sizes (PSUs): 371s E H M 371s 4421 755 1018 371s Data variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "pw" "fpc" 371s 371s api> svymean(~api00, dstrat) 371s mean SE 371s api00 662.29 9.4089 371s 371s api> svytotal(~enroll, dstrat, na.rm=TRUE) 371s total SE 371s enroll 3687178 114642 371s 371s api> # one-stage cluster sample 371s api> dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 371s 371s api> summary(dclus1) 371s 1 - level Cluster Sampling design 371s With (15) clusters. 371s dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 371s Probabilities: 371s Min. 1st Qu. Median Mean 3rd Qu. Max. 371s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 371s Population size (PSUs): 757 371s Data variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "fpc" "pw" 371s 371s api> svymean(~api00, dclus1) 371s mean SE 371s api00 644.17 23.542 371s 371s api> svytotal(~enroll, dclus1, na.rm=TRUE) 371s total SE 371s enroll 3404940 932235 371s 371s api> # two-stage cluster sample 371s api> dclus2<-svydesign(id=~dnum+snum, fpc=~fpc1+fpc2, data=apiclus2) 371s 371s api> summary(dclus2) 371s 2 - level Cluster Sampling design 371s With (40, 126) clusters. 371s dclus2<-svydesign(id=~dnum+snum, fpc=~fpc1+fpc2, data=apiclus2) 371s Probabilities: 371s Min. 1st Qu. Median Mean 3rd Qu. Max. 371s 0.003669 0.037743 0.052840 0.042390 0.052840 0.052840 371s Population size (PSUs): 757 371s Data variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "pw" "fpc1" "fpc2" 371s 371s api> svymean(~api00, dclus2) 371s mean SE 371s api00 670.81 30.099 371s 371s api> svytotal(~enroll, dclus2, na.rm=TRUE) 371s total SE 371s enroll 2639273 799638 371s 371s api> # two-stage `with replacement' 371s api> dclus2wr<-svydesign(id=~dnum+snum, weights=~pw, data=apiclus2) 371s 371s api> summary(dclus2wr) 371s 2 - level Cluster Sampling design (with replacement) 371s With (40, 126) clusters. 371s dclus2wr<-svydesign(id=~dnum+snum, weights=~pw, data=apiclus2) 371s Probabilities: 371s Min. 1st Qu. Median Mean 3rd Qu. Max. 371s 0.003669 0.037743 0.052840 0.042390 0.052840 0.052840 371s Data variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "pw" "fpc1" "fpc2" 371s 371s api> svymean(~api00, dclus2wr) 371s mean SE 371s api00 670.81 30.712 371s 371s api> svytotal(~enroll, dclus2wr, na.rm=TRUE) 371s total SE 371s enroll 2639273 820261 371s 371s api> # convert to replicate weights 371s api> rclus1<-as.svrepdesign(dclus1) 371s 371s api> summary(rclus1) 371s Call: as.svrepdesign.default(dclus1) 371s Unstratified cluster jacknife (JK1) with 15 replicates. 371s Variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "fpc" "pw" 371s 371s api> svymean(~api00, rclus1) 371s mean SE 371s api00 644.17 26.329 371s 371s api> svytotal(~enroll, rclus1, na.rm=TRUE) 371s total SE 371s enroll 3404940 932235 371s 371s api> # post-stratify on school type 371s api> pop.types<-xtabs(~stype, data=apipop) 371s 371s api> rclus1p<-postStratify(rclus1, ~stype, pop.types) 371s 371s api> dclus1p<-postStratify(dclus1, ~stype, pop.types) 371s 371s api> summary(dclus1p) 371s 1 - level Cluster Sampling design 371s With (15) clusters. 371s dclus1p<-postStratify(dclus1, ~stype, pop.types) 371s Probabilities: 371s Min. 1st Qu. Median Mean 3rd Qu. Max. 371s 0.01854 0.03257 0.03257 0.03040 0.03257 0.03257 371s Population size (PSUs): 757 371s Data variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "fpc" "pw" 371s 371s api> summary(rclus1p) 371s Call: rclus1p<-postStratify(rclus1, ~stype, pop.types) 371s Unstratified cluster jacknife (JK1) with 15 replicates. 371s Variables: 371s [1] "cds" "stype" "name" "sname" "snum" "dname" 371s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 371s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 371s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 371s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 371s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 371s [37] "api.stu" "fpc" "pw" 371s 371s api> svymean(~api00, dclus1p) 371s mean SE 371s api00 642.31 23.921 371s 371s api> svytotal(~enroll, dclus1p, na.rm=TRUE) 371s total SE 371s enroll 3680893 406293 371s 371s api> svymean(~api00, rclus1p) 371s mean SE 371s api00 642.31 26.934 371s 371s api> svytotal(~enroll, rclus1p, na.rm=TRUE) 371s total SE 371s enroll 3680893 473431 371s > 371s BEGIN TEST badcal.R 371s 371s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 371s Copyright (C) 2024 The R Foundation for Statistical Computing 371s Platform: s390x-ibm-linux-gnu (64-bit) 371s 371s R is free software and comes with ABSOLUTELY NO WARRANTY. 371s You are welcome to redistribute it under certain conditions. 371s Type 'license()' or 'licence()' for distribution details. 371s 371s R is a collaborative project with many contributors. 371s Type 'contributors()' for more information and 371s 'citation()' on how to cite R or R packages in publications. 371s 371s Type 'demo()' for some demos, 'help()' for on-line help, or 371s 'help.start()' for an HTML browser interface to help. 371s Type 'q()' to quit R. 371s 371s > ## 371s > ## Calibration with badly-scaled initial weights (bug report by Takahiro Tsuchiya) 371s > ## 371s > library(survey) 371s Loading required package: grid 371s Loading required package: Matrix 372s Loading required package: survival 372s 372s Attaching package: 'survey' 372s 372s The following object is masked from 'package:graphics': 372s 372s dotchart 372s 372s > data <- data.frame(x=c(1,1,1,1,2,2,2,2,2,2), w=rep(10,10)) 372s > des <- svydesign(ids=~1, weights=~w, data=data) 372s > des.c <- calibrate(des, ~factor(x), c(10000, 5000)) 372s > des.r <- calibrate(des, ~factor(x), c(10000, 5000), calfun='raking') 372s > stopifnot(all.equal(svytotal(~factor(x), des.c), svytotal(~factor(x), des.r))) 372s > 372s BEGIN TEST bycovmat.R 372s 372s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 372s Copyright (C) 2024 The R Foundation for Statistical Computing 372s Platform: s390x-ibm-linux-gnu (64-bit) 372s 372s R is free software and comes with ABSOLUTELY NO WARRANTY. 372s You are welcome to redistribute it under certain conditions. 372s Type 'license()' or 'licence()' for distribution details. 372s 372s R is a collaborative project with many contributors. 372s Type 'contributors()' for more information and 372s 'citation()' on how to cite R or R packages in publications. 372s 372s Type 'demo()' for some demos, 'help()' for on-line help, or 372s 'help.start()' for an HTML browser interface to help. 372s Type 'q()' to quit R. 372s 372s > 372s > library(survey) 372s Loading required package: grid 372s Loading required package: Matrix 373s Loading required package: survival 373s 373s Attaching package: 'survey' 373s 373s > data(api) 373s The following object is masked from 'package:graphics': 373s 373s dotchart 373s 373s > options(survey.replicates.mse=TRUE) 373s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 373s > rclus1<-as.svrepdesign(dclus1) 373s > 373s > a<-svyby(~api00+api99, ~comp.imp+sch.wide,design=rclus1,svymean, 373s + covmat=TRUE,drop.empty.groups=FALSE) 373s > b<-svyby(~api00+api99, ~comp.imp+sch.wide,design=rclus1,svymean, 373s + covmat=TRUE,drop.empty.groups=TRUE) 373s > 373s > stopifnot(all.equal( 373s + as.vector(as.matrix(SE(a))),as.vector(sqrt(diag(vcov(a)))) 373s + )) 373s > stopifnot(all.equal( 373s + as.vector(as.matrix(SE(b))),as.vector(sqrt(diag(vcov(b)))) 373s + )) 373s > 373s > rat <- svyratio(~ell+mobility, ~mobility+meals, dclus1,covmat=TRUE) 373s > all <- svytotal(~ell+mobility+meals, dclus1) 373s > 373s > stopifnot(all(abs(vcov(svycontrast(all, 373s + list(quote(ell/mobility), 373s + quote(mobility/mobility), 373s + quote(ell/meals),quote(mobility/meals)))) 373s + -vcov(rat))<1e-10)) 373s > 373s > stopifnot(all(abs(SE(rat)-sqrt(diag(vcov(rat))))<1e-10)) 373s > 373s > rat <- svyratio(~ell+mobility, ~mobility+meals, rclus1,covmat=TRUE) 373s > all <- svytotal(~ell+mobility+meals, rclus1, return.replicates=TRUE) 373s > 373s > con<-svycontrast(all, 373s + list(quote(ell/mobility), 373s + quote(mobility/mobility), 373s + quote(ell/meals),quote(mobility/meals))) 373s > 373s > stopifnot(all(abs(survey:::svrVar(con$replicates, rclus1$scale,rclus1$rscales,mse=rclus1$mse, coef=coef(con))-vcov(rat))<1e-10)) 373s > 373s > options(survey.replicates.mse=FALSE) 373s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 373s > rclus1<-as.svrepdesign(dclus1) 373s > 373s > a<-svyby(~api00+api99, ~comp.imp+sch.wide,design=rclus1,svymean, 373s + covmat=TRUE,drop.empty.groups=FALSE) 373s > b<-svyby(~api00+api99, ~comp.imp+sch.wide,design=rclus1,svymean, 373s + covmat=TRUE,drop.empty.groups=TRUE) 373s > 373s > stopifnot(all.equal( 373s + as.vector(as.matrix(SE(a))), as.vector(sqrt(diag(vcov(a)))) 373s + )) 373s > stopifnot(all.equal( 373s + as.vector(as.matrix(SE(b))), as.vector(sqrt(diag(vcov(b)))) 373s + )) 373s > 373s > rat <- svyratio(~ell+mobility, ~mobility+meals, dclus1,covmat=TRUE) 373s > all <- svytotal(~ell+mobility+meals, dclus1) 373s > 373s > stopifnot(all(abs(vcov(svycontrast(all, 373s + list(quote(ell/mobility), 373s + quote(mobility/mobility), 373s + quote(ell/meals),quote(mobility/meals)))) 373s + -vcov(rat))<1e-10)) 373s > 373s > stopifnot(all(abs(SE(rat)-sqrt(diag(vcov(rat))))<1e-10)) 373s > 373s > rat <- svyratio(~ell+mobility, ~mobility+meals, rclus1,covmat=TRUE) 373s > all <- svytotal(~ell+mobility+meals, rclus1, return.replicates=TRUE) 373s > 373s > con<-svycontrast(all, 373s + list(quote(ell/mobility), 373s + quote(mobility/mobility), 373s + quote(ell/meals),quote(mobility/meals))) 373s > 373s > stopifnot(all(abs(survey:::svrVar(con$replicates, rclus1$scale,rclus1$rscales,mse=rclus1$mse, coef=coef(con))-vcov(rat))<1e-10)) 373s > 373s > 373s > 373s BEGIN TEST caleg.R 373s 373s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 373s Copyright (C) 2024 The R Foundation for Statistical Computing 373s Platform: s390x-ibm-linux-gnu (64-bit) 373s 373s R is free software and comes with ABSOLUTELY NO WARRANTY. 373s You are welcome to redistribute it under certain conditions. 373s Type 'license()' or 'licence()' for distribution details. 373s 373s R is a collaborative project with many contributors. 373s Type 'contributors()' for more information and 373s 'citation()' on how to cite R or R packages in publications. 373s 373s Type 'demo()' for some demos, 'help()' for on-line help, or 373s 'help.start()' for an HTML browser interface to help. 373s Type 'q()' to quit R. 373s 374s > ## 374s > ## Calibration examples 374s > ## 374s > 374s > 374s > ## Example of calibration to first-stage clusters 374s > library(survey) 374s Loading required package: grid 374s Loading required package: Matrix 375s Loading required package: survival 375s 375s Attaching package: 'survey' 375s 375s The following object is masked from 'package:graphics': 375s 375s dotchart 375s 375s > data(api) 375s > 375s > clusters<-table(apiclus2$dnum) 375s > clusters<-clusters[clusters>1 & names(clusters)!="639"] 375s > apiclus2a<-subset(apiclus2, dnum %in% as.numeric(names(clusters))) 375s > 375s > dclus2<-svydesign(id=~dnum+snum, fpc=~fpc1+fpc2, data=apiclus2a) 375s > 375s > popclusters<-subset(apipop, dnum %in% as.numeric(names(clusters))) 375s > 375s > pop<-lapply(as.numeric(names(clusters)), function(cluster) { 375s + colSums(model.matrix(~api99, model.frame(~api99, subset(popclusters, dnum %in% cluster))))}) 375s > 375s > names(pop)<-names(clusters) 375s > 375s > dclus2g<-calibrate(dclus2, ~api99, pop,stage=1) 375s > 375s > svymean(~api99, dclus2) 375s mean SE 375s api99 642.14 31.434 375s > svymean(~api99, dclus2g) 375s mean SE 375s api99 654.49 29.82 375s > 375s > round(svyby(~api99, ~dnum, design=dclus2, svymean),4) 375s dnum api99 se 375s 83 83 694.3333 0.0000 375s 132 132 505.0000 0.0000 375s 152 152 574.0000 0.0000 375s 173 173 894.7500 0.0000 375s 198 198 533.7500 0.0000 375s 200 200 589.8000 6.8335 375s 228 228 477.0000 0.0000 375s 295 295 646.4000 0.0000 375s 302 302 903.5000 0.0000 375s 403 403 852.4000 0.0000 375s 452 452 533.0000 0.0000 375s 480 480 614.2000 0.0000 375s 523 523 580.5000 0.0000 375s 534 534 564.6000 0.0000 375s 549 549 896.2000 0.0000 375s 552 552 730.0000 0.0000 375s 570 570 518.4000 7.5478 375s 575 575 800.8000 4.2513 375s 596 596 785.6000 2.4155 375s 620 620 591.6000 10.5869 375s 638 638 560.2000 4.0954 375s 674 674 760.0000 0.0000 375s 679 679 610.2500 0.0000 375s 687 687 718.6667 0.0000 375s 701 701 651.5000 0.0000 375s 711 711 690.5000 0.0000 375s 731 731 702.0000 2.1744 375s 768 768 562.5000 0.0000 375s 781 781 854.4000 0.7456 375s > 375s > round(svyby(~api99, ~dnum, design=dclus2g, svymean),4) 376s dnum api99 se 376s 83 83 694.3333 0 376s 132 132 505.0000 0 376s 152 152 574.0000 0 376s 173 173 894.7500 0 376s 198 198 533.7500 0 376s 200 200 567.5455 0 376s 228 228 477.0000 0 376s 295 295 646.4000 0 376s 302 302 903.5000 0 376s 403 403 852.4000 0 376s 452 452 533.0000 0 376s 480 480 614.2000 0 376s 523 523 580.5000 0 376s 534 534 564.6000 0 376s 549 549 896.2000 0 376s 552 552 730.0000 0 376s 570 570 548.9444 0 376s 575 575 824.5357 0 376s 596 596 787.5714 0 376s 620 620 609.3750 0 376s 638 638 585.6429 0 376s 674 674 760.0000 0 376s 679 679 610.2500 0 376s 687 687 718.6667 0 376s 701 701 651.5000 0 376s 711 711 690.5000 0 376s 731 731 700.6667 0 376s 768 768 562.5000 0 376s 781 781 851.0000 0 376s > 376s > ## Averaging to first stage 376s > 376s > dclus1<- svydesign(id = ~dnum, weights = ~pw, data = apiclus1, fpc = ~fpc) 376s > pop<-colSums(cbind(1,apipop$enroll),na.rm=TRUE) 376s > 376s > dclus1g<-calibrate(dclus1, ~enroll, pop, aggregate=1) 376s > 376s > svytotal(~enroll,dclus1g) 376s total SE 376s enroll 3811472 0 376s > svytotal(~api.stu,dclus1g) 376s total SE 376s api.stu 3242857 38967 376s > 376s > #variation within clusters should be zero 376s > all.equal(0, max(ave(weights(dclus1g),dclus1g$cluster,FUN=var),na.rm=TRUE)) 376s [1] TRUE 376s > 376s > ##bounded weights 376s > dclus1g<-calibrate(dclus1, ~enroll, pop) 376s > range(weights(dclus1g)/weights(dclus1)) 376s [1] 0.7906782 1.7891164 376s > dclus1gb<-calibrate(dclus1, ~enroll, pop, bounds=c(.6,1.5)) 376s > range(weights(dclus1gb)/weights(dclus1)) 376s [1] 0.7198751 1.5000000 376s > 376s > ## Ratio estimators 376s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 376s > svytotal(~api.stu,dstrat) 376s total SE 376s api.stu 3086009 99477 376s > common<-svyratio(~api.stu, ~enroll, dstrat, separate=FALSE) 376s > total.enroll<-sum(apipop$enroll,na.rm=TRUE) 376s > predict(common, total=total.enroll) 376s $total 376s enroll 376s api.stu 3190038 376s 376s $se 376s enroll 376s api.stu 29565.98 376s 376s > dstratg<-calibrate(dstrat,~enroll-1, total.enroll, variance=1) 376s > svytotal(~api.stu, dstratg) 376s total SE 376s api.stu 3190038 29566 376s > 376s > ## postStratify vs calibrate in stratified sample (Ben French) 376s > set.seed(17) 376s > dat<-data.frame(y=rep(0:1,each=100),x=rnorm(200)+2*rep(0:1,each=100), 376s + z=rbinom(200,1,.2), fpc=rep(c(100,10000),each=100)) 376s > dat$w<-ifelse(dat$y,dat$z,1-dat$z) 376s > popw<-data.frame(w=c("0","1"), Freq=c(2000,8000)) 376s > des<-svydesign(id=~1,fpc=~fpc, data=dat,strata=~y) 376s > postStratify(des,~w,popw)->dps 376s > dcal<-calibrate(des,~factor(w), pop=c(10000,8000)) 376s > 376s > all.equal(SE(svymean(~x,dcal)),SE(svymean(~x,dps))) 376s [1] TRUE 376s > 376s > ## missing data in calibrated design 376s > dps$variables$z[1]<-NA 376s > summary(svyglm(y~z+x,design=dps,family=quasibinomial)) 376s 376s Call: 376s svyglm(formula = y ~ z + x, design = dps, family = quasibinomial) 376s 376s Survey design: 376s postStratify(des, ~w, popw) 376s 376s Coefficients: 376s Estimate Std. Error t value Pr(>|t|) 376s (Intercept) -0.1203 0.3380 -0.356 0.722 376s z 6.2118 0.6451 9.630 <2e-16 *** 376s x 2.2602 0.2514 8.992 <2e-16 *** 376s --- 376s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 376s 376s (Dispersion parameter for quasibinomial family taken to be 1.919987) 376s 376s Number of Fisher Scoring iterations: 9 376s 376s > 376s > ## Ratio estimator using the heteroskedasticity parameter (Daniel Oehm) 376s > # should match the ratio estmate above 376s > dstratgh <- calibrate(dstrat,~enroll-1, total.enroll, variance=apistrat$enroll) 376s > svytotal(~api.stu, dstratgh) 376s total SE 376s api.stu 3190038 29566 376s > 376s > ## individual boundary constraints as multiplicative values (Daniel Oehm) 376s > bnds <- list( 376s + lower = c(1, 1, rep(-Inf, nrow(apistrat)-2)), 376s + upper = c(1, 1, rep(Inf, nrow(apistrat)-2))) # the first two weights will remain unchanged the others are free to move 376s > lapply(bnds, head) 376s $lower 376s [1] 1 1 -Inf -Inf -Inf -Inf 376s 376s $upper 376s [1] 1 1 Inf Inf Inf Inf 376s 376s > dstratg1<-calibrate(dstrat, ~enroll-1, total.enroll, bounds = bnds, variance=apistrat$enroll) 376s > svytotal(~api.stu, dstratg1) 376s total SE 376s api.stu 3190133 29561 376s > head(weights(dstrat)) 376s 1 2 3 4 5 6 376s 44.21 44.21 44.21 44.21 44.21 44.21 376s > head(weights(dstratg1)) 376s 1 2 3 4 5 6 376s 44.21000 44.21000 45.72055 45.72055 45.72055 45.72055 376s > all.equal(weights(dstrat)[1:2], weights(dstratg1)[1:2]) 376s [1] TRUE 376s > 376s > ## individual boundary constraints as constant values (Daniel Oehm) 376s > bnds <- list( 376s + lower = c(44.21, 44.21, rep(-Inf, nrow(apistrat)-2)), 376s + upper = c(44.21, 44.21, rep(Inf, nrow(apistrat)-2))) # the first two weights will remain unchanged 376s > lapply(bnds, head) 376s $lower 376s [1] 44.21 44.21 -Inf -Inf -Inf -Inf 376s 376s $upper 376s [1] 44.21 44.21 Inf Inf Inf Inf 376s 376s > dstratg2<-calibrate(dstrat, ~enroll-1, total.enroll, bounds = bnds, bounds.const = TRUE, variance=apistrat$enroll) 376s > svytotal(~api.stu, dstratg2) 376s total SE 376s api.stu 3190133 29561 376s > head(weights(dstrat)) 376s 1 2 3 4 5 6 376s 44.21 44.21 44.21 44.21 44.21 44.21 376s > head(weights(dstratg2)) 376s 1 2 3 4 5 6 376s 44.21000 44.21000 45.72055 45.72055 45.72055 45.72055 376s > all.equal(round(weights(dstrat)[1:2], 8), round(weights(dstratg2)[1:2]), 8) # minor rounding error but all good 376s [1] TRUE 376s > 376s > # sparse matrix support (Daniel Oehm) 376s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 376s > pop.totals<-c(`(Intercept)`=6194, stypeH=755, stypeM=1018) 376s > dclus1g<-calibrate(dclus1, ~stype, pop.totals) 376s > svymean(~api00, dclus1g) 376s mean SE 376s api00 642.31 23.921 376s > svytotal(~enroll, dclus1g) 376s total SE 376s enroll 3680893 406293 376s > 376s > pop.totals<-c(`(Intercept)`=6194, stypeH=755, stypeM=1018) 376s > dclus1g<-calibrate(dclus1, ~stype, pop.totals, sparse = TRUE) 376s > svymean(~api00, dclus1g) 376s mean SE 376s api00 642.31 23.921 376s > svytotal(~enroll, dclus1g) 376s total SE 376s enroll 3680893 406293 376s > 376s > pop.totals<-c(`(Intercept)`=6194, stypeH=755, stypeM=1018) 376s > dclus1g<-calibrate(dclus1, ~stype, pop.totals, sparse = TRUE, calfun = "raking") 376s > svymean(~api00, dclus1g) 376s mean SE 376s api00 642.31 23.921 376s > svytotal(~enroll, dclus1g) 376s total SE 376s enroll 3680893 406293 376s > 376s BEGIN TEST check.R 376s 376s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 376s Copyright (C) 2024 The R Foundation for Statistical Computing 376s Platform: s390x-ibm-linux-gnu (64-bit) 376s 376s R is free software and comes with ABSOLUTELY NO WARRANTY. 376s You are welcome to redistribute it under certain conditions. 376s Type 'license()' or 'licence()' for distribution details. 376s 376s R is a collaborative project with many contributors. 376s Type 'contributors()' for more information and 376s 'citation()' on how to cite R or R packages in publications. 376s 376s Type 'demo()' for some demos, 'help()' for on-line help, or 376s 'help.start()' for an HTML browser interface to help. 376s Type 'q()' to quit R. 376s 376s > library(survey) 376s Loading required package: grid 376s Loading required package: Matrix 377s Loading required package: survival 377s 377s Attaching package: 'survey' 377s 377s The following object is masked from 'package:graphics': 377s 377s dotchart 377s 377s > data(fpc) 377s > ## test various possibilities for svydesign 377s > a<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(weights = ~weight, ids = ~psuid, strata = ~stratid, 377s variables = ~x, data = fpc, nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7413 377s > a<-svydesign(weights=~weight, ids=~0, strata=~stratid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(weights = ~weight, ids = ~0, strata = ~stratid, variables = ~x, 377s data = fpc, nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7413 377s > a<-svydesign(weights=1, ids=~0, strata=~stratid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(weights = 1, ids = ~0, strata = ~stratid, variables = ~x, 377s data = fpc, nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 44.2 6.237 377s > Warning message: 377s In svydesign.default(ids = ~0, strata = ~stratid, variables = ~x, : 377s No weights or probabilities supplied, assuming equal probability 377s Warning message: 377s In svydesign.default(ids = ~psuid, strata = ~stratid, variables = ~x, : 377s No weights or probabilities supplied, assuming equal probability 377s a<-svydesign(ids=~0, strata=~stratid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(ids = ~0, strata = ~stratid, variables = ~x, data = fpc, 377s nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.525 0.7796 377s > a<-svydesign(ids=~0, strata=~stratid, prob=~I(1/weight),variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(ids = ~0, strata = ~stratid, prob = ~I(1/weight), variables = ~x, 377s data = fpc, nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7413 377s > a<-svydesign(ids=~psuid, strata=~stratid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(ids = ~psuid, strata = ~stratid, variables = ~x, data = fpc, 377s nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s xWarning message: 377s In svydesign.default(ids = ~psuid, variables = ~x, data = fpc, nest = TRUE) : 377s No weights or probabilities supplied, assuming equal probability 377s 5.525 0.7796 377s > a<-svydesign(ids=~psuid, variables=~x, data=fpc, nest=TRUE) 377s > a 377s 1 - level Cluster Sampling design (with replacement) 377s With (5) clusters. 377s svydesign(ids = ~psuid, variables = ~x, data = fpc, nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.525 0.838 377s > a<-svydesign(ids=~psuid, weights=~weight, variables=~x, data=fpc, nest=TRUE) 377s > a 377s 1 - level Cluster Sampling design (with replacement) 377s With (5) clusters. 377s svydesign(ids = ~psuid, weights = ~weight, variables = ~x, data = fpc, 377s nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7938 377s > a<-svydesign(ids=~stratid+psuid, weights=~weight, variables=~x, data=fpc) 377s > a 377s 2 - level Cluster Sampling designWarning message: 377s In svydesign.default(ids = ~stratid + psuid, variables = ~x, data = fpc) : 377s No weights or probabilities supplied, assuming equal probability 377s (with replacement) 377s With (2, 8) clusters. 377s svydesign(ids = ~stratid + psuid, weights = ~weight, variables = ~x, 377s data = fpc) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.5465 377s > a<-svydesign(ids=~stratid+psuid, variables=~x, data=fpc) 377s > a 377s 2 - level Cluster Sampling design (with replacement) 377s With (2, 8) clusters. 377s svydesign(ids = ~stratid + psuid, variables = ~x, data = fpc) 377s > svymean(~x,a) 377s mean SE 377s x 5.525 0.5188 377s > a<-svydesign(weights=fpc$weight, ids=fpc$psuid, strata=fpc$stratid, variables=fpc[,"x",drop=FALSE], nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(weights = fpc$weight, ids = fpc$psuid, strata = fpc$stratid, 377s variables = fpc[, "x", drop = FALSE], nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7413 377s > a<-svydesign(weights=fpc$weight, ids=fpc$psuid, strata=fpc$stratid, variables=fpc[,4:6], nest=TRUE) 377s > a 377s Stratified Independent Sampling design (with replacement) 377s svydesign(weights = fpc$weight, ids = fpc$psuid, strata = fpc$stratid, 377s variables = fpc[, 4:6], nest = TRUE) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7413 377s > 377s > a<-svydesign(weights=fpc$weight, ids=fpc$psuid, variables=fpc[,4:6], fpc=rep(27,8)) 377s > a 377s 1 - level Cluster Sampling design 377s With (5) clusters. 377s svydesign(weights = fpc$weight, ids = fpc$psuid, variables = fpc[, 377s 4:6], fpc = rep(27, 8)) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.7165 377s > 377s > a<-svydesign(weights=fpc$weight, ids=fpc$psuid, strata=fpc$stratid, nest=TRUE, variables=fpc[,4:6], fpc=fpc$Nh) 377s > a 377s Stratified Independent Sampling design 377s svydesign(weights = fpc$weight, ids = fpc$psuid, strata = fpc$stratid, 377s nest = TRUE, variables = fpc[, 4:6], fpc = fpc$Nh) 377s > svymean(~x,a) 377s mean SE 377s x 5.4481 0.616 377s > 377s BEGIN TEST contrast-replicates.R 377s 377s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 377s Copyright (C) 2024 The R Foundation for Statistical Computing 377s Platform: s390x-ibm-linux-gnu (64-bit) 377s 377s R is free software and comes with ABSOLUTELY NO WARRANTY. 377s You are welcome to redistribute it under certain conditions. 377s Type 'license()' or 'licence()' for distribution details. 377s 377s R is a collaborative project with many contributors. 377s Type 'contributors()' for more information and 377s 'citation()' on how to cite R or R packages in publications. 377s 377s Type 'demo()' for some demos, 'help()' for on-line help, or 377s 'help.start()' for an HTML browser interface to help. 377s Type 'q()' to quit R. 377s 377s > ## test use of replicates in svyby, svycontrast 377s > library(survey) 377s Loading required package: grid 377s Loading required package: Matrix 378s Loading required package: survival 378s 378s Attaching package: 'survey' 378s 378s The following object is masked from 'package:graphics': 378s 378s dotchart 378s 378s > 378s > data(api) 378s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 378s > rclus1<-as.svrepdesign(dclus1) 378s > 378s > meanlogs_without<-svyby(~log(enroll),~stype,svymean, design=rclus1,covmat=TRUE) 378s > c_without<-svycontrast(meanlogs_without, quote(exp(E-H))) 378s > vcov(c_without) 378s contrast 378s contrast 0.06862947 378s > 378s > meanlogs_with<-svyby(~log(enroll),~stype,svymean, design=rclus1,covmat=TRUE,return.replicates=TRUE) 378s > 378s > c_with<-svycontrast(meanlogs_with, quote(exp(E-H))) 378s > 378s > v_with<- vcov(rclus1, c_with$replicates) 378s > 378s > r<- attr(meanlogs_with, "replicates") 378s > vr_with<-vcov(rclus1,exp(r[,1]-r[,2])) 378s > 378s > stopifnot(all.equal(as.numeric(v_with),as.numeric(vr_with))) 378s > stopifnot(all.equal(as.numeric(v_with),as.numeric(vcov(c_with)))) 378s > 378s BEGIN TEST coxph-termtest.R 378s 378s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 378s Copyright (C) 2024 The R Foundation for Statistical Computing 378s Platform: s390x-ibm-linux-gnu (64-bit) 378s 378s R is free software and comes with ABSOLUTELY NO WARRANTY. 378s You are welcome to redistribute it under certain conditions. 378s Type 'license()' or 'licence()' for distribution details. 378s 378s R is a collaborative project with many contributors. 378s Type 'contributors()' for more information and 378s 'citation()' on how to cite R or R packages in publications. 378s 378s Type 'demo()' for some demos, 'help()' for on-line help, or 378s 'help.start()' for an HTML browser interface to help. 378s Type 'q()' to quit R. 378s 379s > library(survey) 379s Loading required package: grid 379s Loading required package: Matrix 380s Loading required package: survival 380s 380s Attaching package: 'survey' 380s 380s > library(survival) 380s The following object is masked from 'package:graphics': 380s 380s dotchart 380s 380s > set.seed(2021-6-25) 380s > test1 <- list(time=c(4,3,1,1,2,2,3), 380s + status=c(1,1,1,0,1,1,0), 380s + x1=as.factor(rbinom(7, 2, 0.5)), 380s + x=c(0,2,1,1,1,0,0)) 380s > # Fit a stratified model 380s > mod_c <- coxph(Surv(time, status) ~ x1 + x, test1) 380s > mod_d <- coxph(Surv(time, status) ~ x + x1, test1) 380s > stopifnot(all.equal(regTermTest(mod_c, ~x1, df = Inf)[c("chisq","df","test.terms","p")], 380s + regTermTest(mod_d, ~x1, df = Inf)[c("chisq","df","test.terms","p")])) 380s > 380s > data(pbc, package="survival") 380s > 380s > pbc$randomized<-with(pbc, !is.na(trt) & trt>0) 380s > biasmodel<-glm(randomized~age*edema,data=pbc,family=binomial) 380s > pbc$randprob<-fitted(biasmodel) 380s > if (is.null(pbc$albumin)) pbc$albumin<-pbc$alb ##pre2.9.0 380s > 380s > dpbc<-svydesign(id=~1, prob=~randprob, strata=~edema, data=subset(pbc,randomized)) 380s > library(splines) 380s > model<-svycoxph(formula = Surv(time, status > 0) ~ bili + protime + albumin+ns(bili,4)[,1:3], design = dpbc) 380s > test<-regTermTest(model, ~ns(bili,4)[,1:3],method="LRT") 380s > stopifnot(all.equal(test$chisq, 47.314, tolerance=1e-4)) 380s > stopifnot(all.equal(test$lambda, c(1.4764260, 1.0109836, 0.6923415),tolerance=1e-4)) 380s > 380s BEGIN TEST deff.R 380s 380s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 380s Copyright (C) 2024 The R Foundation for Statistical Computing 380s Platform: s390x-ibm-linux-gnu (64-bit) 380s 380s R is free software and comes with ABSOLUTELY NO WARRANTY. 380s You are welcome to redistribute it under certain conditions. 380s Type 'license()' or 'licence()' for distribution details. 380s 380s R is a collaborative project with many contributors. 380s Type 'contributors()' for more information and 380s 'citation()' on how to cite R or R packages in publications. 380s 380s Type 'demo()' for some demos, 'help()' for on-line help, or 380s 'help.start()' for an HTML browser interface to help. 380s Type 'q()' to quit R. 380s 380s > ## from Takahiro Tsuchiya 380s > library(survey) 380s Loading required package: grid 380s Loading required package: Matrix 381s Loading required package: survival 381s 381s Attaching package: 'survey' 381s 381s The following object is masked from 'package:graphics': 381s 381s dotchart 381s 381s > kigyo<-read.table(tmp<-textConnection(" obs uriage srs.w pps.w 381s + 1 1 15 100 20 381s + 2 2 143 100 200 381s + 3 3 21 100 11 381s + 4 4 51 100 25 381s + 5 5 337 100 550 381s + 6 6 50 100 30 381s + 7 7 274 100 250 381s + 8 8 145 100 100 381s + 9 9 15 100 10 381s + 10 10 86 100 55 381s + ",open="r"),header=TRUE) 381s > close(tmp) 381s > des.srs <- svydesign(ids=~1, weights=~srs.w, data=kigyo) 381s > (res.srs <- svymean(~uriage, des.srs, deff=TRUE)) 381s mean SE DEff 381s uriage 113.700 35.626 1.0101 381s > (SE(res.srs)^2) / ((1-10/1000) * coef(svyvar(~uriage, des.srs)) / 10) 381s uriage 381s uriage 1.010101 381s > 381s > (tres.srs <- svytotal(~uriage, des.srs, deff=TRUE)) 381s total SE DEff 381s uriage 113700 35626 1.0101 381s > (SE(tres.srs)^2) / (1000^2 * (1-10/1000) * coef(svyvar(~uriage, des.srs)) / 10) 381s uriage 381s uriage 1.010101 381s > 381s > 381s > des.pps <- svydesign(ids=~1, weights=~pps.w, data=kigyo) 381s > (res.pps <- svymean(~uriage, des.pps, deff='replace')) 381s mean SE DEff 381s uriage 243.914 48.752 1.9741 381s > (SE(res.pps)^2) / (coef(svyvar(~uriage, des.pps)) / 10) 381s uriage 381s uriage 1.974067 381s > (tres.pps <- svytotal(~uriage, des.pps, deff='replace')) 381s total SE DEff 381s uriage 305136 184965 18.157 381s > (N.hat <- sum(weights(des.pps))) 381s [1] 1251 381s > (SE(tres.pps)^2) / (N.hat^2 * coef(svyvar(~uriage, des.pps)) / 10) 381s uriage 381s uriage 18.15669 381s > 381s BEGIN TEST defftest.R 381s 381s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 381s Copyright (C) 2024 The R Foundation for Statistical Computing 381s Platform: s390x-ibm-linux-gnu (64-bit) 381s 381s R is free software and comes with ABSOLUTELY NO WARRANTY. 381s You are welcome to redistribute it under certain conditions. 381s Type 'license()' or 'licence()' for distribution details. 381s 381s R is a collaborative project with many contributors. 381s Type 'contributors()' for more information and 381s 'citation()' on how to cite R or R packages in publications. 381s 381s Type 'demo()' for some demos, 'help()' for on-line help, or 381s 'help.start()' for an HTML browser interface to help. 381s Type 'q()' to quit R. 381s 381s > library(survey) 381s Loading required package: grid 381s Loading required package: Matrix 382s Loading required package: survival 382s 382s Attaching package: 'survey' 382s 382s The following object is masked from 'package:graphics': 382s 382s dotchart 382s 382s > 382s > data(api) 382s > 382s > ## one-stage cluster sample 382s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 382s > 382s > # svyglm model 382s > mod <- svyglm(api99 ~ enroll + api.stu, design = dclus1, deff = TRUE) 382s > 382s > #deffs returned from svyglm model - implausibly high 382s > deff(mod) 382s (Intercept) enroll api.stu 382s 1.919945 2.500983 2.686102 382s > #> (Intercept) enroll api.stu 382s > #> 351.3500 457.6799 491.5567 382s > 382s > # run mod with same data and glm() 382s > srs_mod <- glm(api99 ~ enroll + api.stu, data = apiclus1) 382s > 382s > # manually calculate deffs 382s > 382s > clust_se <- summary(mod)$coefficients[,2] 382s > srs_se <- summary(srs_mod)$coefficients[,2] 382s > 382s > deffs <- clust_se^2 / srs_se^2 382s > stopifnot(all.equal(deffs, deff(mod))) 383s > 383s > 383s BEGIN TEST domain.R 383s 383s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 383s Copyright (C) 2024 The R Foundation for Statistical Computing 383s Platform: s390x-ibm-linux-gnu (64-bit) 383s 383s R is free software and comes with ABSOLUTELY NO WARRANTY. 383s You are welcome to redistribute it under certain conditions. 383s Type 'license()' or 'licence()' for distribution details. 383s 383s R is a collaborative project with many contributors. 383s Type 'contributors()' for more information and 383s 'citation()' on how to cite R or R packages in publications. 383s 383s Type 'demo()' for some demos, 'help()' for on-line help, or 383s 'help.start()' for an HTML browser interface to help. 383s Type 'q()' to quit R. 383s 383s > ## 383s > ## Domain means can be written as ratio estimators or as regression coefficients 383s > ## 383s > ## This code checks that subsetting the design object gives the same results as 383s > ## these approaches. 383s > ## 383s > 383s > 383s > library(survey) 383s Loading required package: grid 383s Loading required package: Matrix 384s Loading required package: survival 384s 384s Attaching package: 'survey' 384s 384s The following object is masked from 'package:graphics': 384s 384s dotchart 384s 384s > data(fpc) 384s > dfpc<-svydesign(id=~psuid,strat=~stratid,weight=~weight,data=fpc,nest=TRUE) 384s > dsub<-subset(dfpc,x>4) 384s > (m1<-svymean(~x,design=dsub)) 384s mean SE 384s x 6.195 0.7555 384s > 384s > ## These should give the same domain estimates and standard errors 384s > (m2<-svyby(~x,~I(x>4),design=dfpc, svymean,keep.var=TRUE)) 384s I(x > 4) x se 384s FALSE FALSE 3.314286 0.3117042 384s TRUE TRUE 6.195000 0.7555129 384s > m3<-svyglm(x~I(x>4)+0,design=dfpc) 384s > summary(m3) 384s 384s Call: 384s svyglm(formula = x ~ I(x > 4) + 0, design = dfpc) 384s 384s Survey design: 384s svydesign(id = ~psuid, strat = ~stratid, weight = ~weight, data = fpc, 384s nest = TRUE) 384s 384s Coefficients: 384s Estimate Std. Error t value Pr(>|t|) 384s I(x > 4)FALSE 3.3143 0.3117 10.63 0.000127 *** 384s I(x > 4)TRUE 6.1950 0.7555 8.20 0.000439 *** 384s --- 384s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 384s 384s (Dispersion parameter for gaussian family taken to be 2.557379) 384s 384s Number of Fisher Scoring iterations: 2 384s 384s > (m4<-svyratio(~I(x*(x>4)),~as.numeric(x>4), dfpc)) 384s Ratio estimator: svyratio.survey.design2(~I(x * (x > 4)), ~as.numeric(x > 4), 384s dfpc) 384s Ratios= 384s as.numeric(x > 4) 384s I(x * (x > 4)) 6.195 384s SEs= 384s as.numeric(x > 4) 384s I(x * (x > 4)) 0.7555129 384s > stopifnot(isTRUE(all.equal(SE(m2), as.vector(SE(m3))))) 384s > stopifnot(isTRUE(all.equal(SE(m2)[2], as.vector(SE(m4))))) 384s > 384s > ## with strata 384s > data(api) 384s > dstrat<-svydesign(id=~1, strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 384s > m1<-svymean(~enroll, subset(dstrat, comp.imp=="Yes")) 384s > m2<-svyglm(enroll~comp.imp-1, dstrat) 384s > m3<- svyratio(~I(enroll*(comp.imp=="Yes")), ~as.numeric(comp.imp=="Yes"), dstrat) 384s > stopifnot(isTRUE(all.equal(as.vector(SE(m2)["comp.impYes"]), as.vector(SE(m1))))) 384s > stopifnot(isTRUE( all.equal(as.vector(SE(m1)), as.vector(drop(SE(m3)))))) 384s > 384s > ## with calibration 384s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 384s > pop.totals<-c(`(Intercept)`=6194, stypeH=755, stypeM=1018) 384s > (dclus1g3 <- calibrate(dclus1, ~stype+api99, c(pop.totals, api99=3914069))) 384s 1 - level Cluster Sampling design 384s With (15) clusters. 384s calibrate(dclus1, ~stype + api99, c(pop.totals, api99 = 3914069)) 384s > 384s > m1<-svymean(~api00, subset(dclus1g3, comp.imp=="Yes")) 384s > m3<-svyratio(~I(api00*(comp.imp=="Yes")), ~as.numeric(comp.imp=="Yes"), dclus1g3) 384s > m2<-svyglm(api00~comp.imp-1, dclus1g3) 384s > stopifnot(isTRUE( all.equal(as.vector(SE(m2)["comp.impYes"]), as.vector(SE(m1))))) 384s > stopifnot(isTRUE( all.equal(as.vector(SE(m1)), as.vector(drop(SE(m3)))))) 384s > 384s > ## with raking 384s > pop.types <- data.frame(stype=c("E","H","M"), Freq=c(4421,755,1018)) 384s > pop.schwide <- data.frame(sch.wide=c("No","Yes"), Freq=c(1072,5122)) 384s > dclus1r<-rake(dclus1, list(~stype,~sch.wide), list(pop.types, pop.schwide)) 384s > m1<-svymean(~api00, subset(dclus1r, comp.imp=="Yes")) 384s > m2<-svyglm(api00~comp.imp-1, dclus1r) 384s > m3<-svyratio(~I(api00*(comp.imp=="Yes")), ~as.numeric(comp.imp=="Yes"), dclus1r) 384s > stopifnot(isTRUE( all.equal(as.vector(SE(m2)["comp.impYes"]), as.vector(SE(m1))))) 384s > stopifnot(isTRUE( all.equal(as.vector(SE(m1)), as.vector(drop(SE(m3)))))) 384s > 384s > 384s > 384s > ## 384s > ## based on bug report from Takahiro Tsuchiya for version 3.4 384s > ## 384s > rei<-read.table(tmp<-textConnection( 384s + " id N n.a h n.ah n.h sub y 384s + 1 1 300 20 1 12 5 TRUE 1 384s + 2 2 300 20 1 12 5 TRUE 2 384s + 3 3 300 20 1 12 5 TRUE 3 384s + 4 4 300 20 1 12 5 TRUE 4 384s + 5 5 300 20 1 12 5 TRUE 5 384s + 6 6 300 20 1 12 5 FALSE NA 384s + 7 7 300 20 1 12 5 FALSE NA 384s + 8 8 300 20 1 12 5 FALSE NA 384s + 9 9 300 20 1 12 5 FALSE NA 384s + 10 10 300 20 1 12 5 FALSE NA 384s + 11 11 300 20 1 12 5 FALSE NA 384s + 12 12 300 20 1 12 5 FALSE NA 384s + 13 13 300 20 2 8 3 TRUE 6 384s + 14 14 300 20 2 8 3 TRUE 7 384s + 15 15 300 20 2 8 3 TRUE 8 384s + 16 16 300 20 2 8 3 FALSE NA 384s + 17 17 300 20 2 8 3 FALSE NA 384s + 18 18 300 20 2 8 3 FALSE NA 384s + 19 19 300 20 2 8 3 FALSE NA 384s + 20 20 300 20 2 8 3 FALSE NA 384s + "), header=TRUE) 384s > close(tmp) 384s > 384s > 384s > des.rei2 <- twophase(id=list(~id,~id), strata=list(NULL,~h), 384s + fpc=list(~N,NULL), subset=~sub, data=rei, method="full") 384s > tot2<- svytotal(~y, subset(des.rei2, y>3)) 384s > 384s > rei$y<-rei$y*(rei$y>3) 384s > ## based on Sarndal et al (9.4.14) 384s > rei$w.ah <- rei$n.ah / rei$n.a 384s > a.rei <- aggregate(rei, by=list(rei$h), mean, na.rm=TRUE) 384s > a.rei$S.ysh <- tapply(rei$y, rei$h, var, na.rm=TRUE) 384s > a.rei$y.u <- sum(a.rei$w.ah * a.rei$y) 384s > V <- with(a.rei, sum(N * (N-1) * ((n.ah-1)/(n.a-1) - (n.h-1)/(N-1)) * w.ah * S.ysh / n.h)) 384s > V <- V + with(a.rei, sum(N * (N-n.a) * w.ah * (y - y.u)^2 / (n.a-1))) 384s > 384s > a.rei$f.h<-with(a.rei, n.h/n.ah) 384s > Vphase2<-with(a.rei, sum(N*N*w.ah^2* ((1-f.h)/n.h) *S.ysh)) 384s > 384s > a.rei$f<-with(a.rei, n.a/N) 384s > a.rei$delta.h<-with(a.rei, (1/n.h)*(n.a-n.ah)/(n.a-1)) 384s > Vphase1<-with(a.rei, sum(N*N*((1-f)/n.a)*( w.ah*(1-delta.h)*S.ysh+ ((n.a)/(n.a-1))*w.ah*(y-y.u)^2))) 384s > 384s > V 384s [1] 70761.47 384s > Vphase1 384s [1] 44325.47 384s > Vphase2 384s [1] 26436 384s > vcov(tot2) 384s [,1] 384s [1,] 70761.47 384s attr(,"phases") 384s attr(,"phases")$phase1 384s [,1] 384s [1,] 44325.47 384s 384s attr(,"phases")$phase2 384s [,1] 384s [1,] 26436 384s 384s > 384s > ## comparing to regression 384s > reg<-svyglm(y~I(y<4), design=des.rei2) 384s > mn<-svymean(~y, subset(des.rei2,y>3)) 384s > all.equal(as.vector(coef(reg))[1],as.vector(coef(mn))) 384s [1] TRUE 384s > all.equal(as.vector(SE(reg))[1],as.vector(SE(mn))) 384s [1] TRUE 384s > vcov(mn) 384s [,1] 384s [1,] 0.3292258 384s attr(,"phases") 384s attr(,"phases")$phase1 384s [,1] 384s [1,] 0.1599264 384s 384s attr(,"phases")$phase2 384s [,1] 384s [1,] 0.1692994 384s 384s > vcov(reg) 384s (Intercept) I(y < 4)TRUE 384s (Intercept) 0.3292258 -0.3292258 384s I(y < 4)TRUE -0.3292258 0.5901907 384s attr(,"phases") 384s attr(,"phases")$phase1 384s (Intercept) I(y < 4)TRUE 384s (Intercept) 0.1599264 -0.1599264 384s I(y < 4)TRUE -0.1599264 0.2588542 384s 384s attr(,"phases")$phase2 384s (Intercept) I(y < 4)TRUE 384s (Intercept) 0.1692994 -0.1692994 384s I(y < 4)TRUE -0.1692994 0.3313365 384s 384s > 384s > 384s BEGIN TEST fpc.R 384s 384s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 384s Copyright (C) 2024 The R Foundation for Statistical Computing 384s Platform: s390x-ibm-linux-gnu (64-bit) 384s 384s R is free software and comes with ABSOLUTELY NO WARRANTY. 384s You are welcome to redistribute it under certain conditions. 384s Type 'license()' or 'licence()' for distribution details. 384s 384s R is a collaborative project with many contributors. 384s Type 'contributors()' for more information and 384s 'citation()' on how to cite R or R packages in publications. 384s 384s Type 'demo()' for some demos, 'help()' for on-line help, or 384s 'help.start()' for an HTML browser interface to help. 384s Type 'q()' to quit R. 384s 384s > library(survey) 384s Loading required package: grid 384s Loading required package: Matrix 385s Loading required package: survival 385s 385s Attaching package: 'survey' 385s 385s The following object is masked from 'package:graphics': 385s 385s dotchart 385s 385s > ## check many permutations of fpc specification 385s > example(fpc) 385s 385s fpc> data(fpc) 385s 386s fpc> fpc 386s stratid psuid weight nh Nh x 386s 1 1 1 3 5 15 2.8 386s 2 1 2 3 5 15 4.1 386s 3 1 3 3 5 15 6.8 386s 4 1 4 3 5 15 6.8 386s 5 1 5 3 5 15 9.2 386s 6 2 1 4 3 12 3.7 386s 7 2 2 4 3 12 6.6 386s 8 2 3 4 3 12 4.2 386s 386s fpc> withoutfpc<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, variables=~x, 386s fpc+ data=fpc, nest=TRUE) 386s 386s fpc> withoutfpc 386s Stratified Independent Sampling design (with replacement) 386s withoutfpc<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, variables=~x, 386s data=fpc, nest=TRUE) 386s 386s fpc> svymean(~x, withoutfpc) 386s mean SE 386s x 5.4481 0.7413 386s 386s fpc> withfpc<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, 386s fpc+ fpc=~Nh, variables=~x, data=fpc, nest=TRUE) 386s 386s fpc> withfpc 386s Stratified Independent Sampling design 386s withfpc<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, 386s fpc=~Nh, variables=~x, data=fpc, nest=TRUE) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s 386s fpc> ## Other equivalent forms 386s fpc> withfpc<-svydesign(prob=~I(1/weight), ids=~psuid, strata=~stratid, 386s fpc+ fpc=~Nh, variables=~x, data=fpc, nest=TRUE) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s 386s fpc> withfpc<-svydesign(weights=~weight, ids=~psuid, strata=~stratid, 386s fpc+ fpc=~I(nh/Nh), variables=~x, data=fpc, nest=TRUE) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s 386s fpc> withfpc<-svydesign(weights=~weight, ids=~interaction(stratid,psuid), 386s fpc+ strata=~stratid, fpc=~I(nh/Nh), variables=~x, data=fpc) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s 386s fpc> withfpc<-svydesign(ids=~psuid, strata=~stratid, fpc=~Nh, 386s fpc+ variables=~x,data=fpc,nest=TRUE) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s 386s fpc> withfpc<-svydesign(ids=~psuid, strata=~stratid, 386s fpc+ fpc=~I(nh/Nh), variables=~x, data=fpc, nest=TRUE) 386s 386s fpc> svymean(~x, withfpc) 386s mean SE 386s x 5.4481 0.616 386s > 386s > 386s BEGIN TEST glm-scoping.R 386s 386s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 386s Copyright (C) 2024 The R Foundation for Statistical Computing 386s Platform: s390x-ibm-linux-gnu (64-bit) 386s 386s R is free software and comes with ABSOLUTELY NO WARRANTY. 386s You are welcome to redistribute it under certain conditions. 386s Type 'license()' or 'licence()' for distribution details. 386s 386s R is a collaborative project with many contributors. 386s Type 'contributors()' for more information and 386s 'citation()' on how to cite R or R packages in publications. 386s 386s Type 'demo()' for some demos, 'help()' for on-line help, or 386s 'help.start()' for an HTML browser interface to help. 386s Type 'q()' to quit R. 386s 386s > ## bug report from Thomas Leeper, fixed in version 3.32-3 386s > 386s > library("survey") 386s Loading required package: grid 386s Loading required package: Matrix 387s Loading required package: survival 387s > data(api) 387s 387s Attaching package: 'survey' 387s 387s The following object is masked from 'package:graphics': 387s 387s dotchart 387s 387s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 387s > 387s > # pass `family` directly (WORKS!) 387s > svyglm(api00~ell+meals+mobility, design=dstrat, family = gaussian()) 387s Stratified Independent Sampling design 387s svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, 387s fpc = ~fpc) 387s 387s Call: svyglm(formula = api00 ~ ell + meals + mobility, design = dstrat, 387s family = gaussian()) 387s 387s Coefficients: 387s (Intercept) ell meals mobility 387s 820.8873 -0.4806 -3.1415 0.2257 387s 387s Degrees of Freedom: 199 Total (i.e. Null); 194 Residual 387s Null Deviance: 3023000 387s Residual Deviance: 1029000 AIC: 2308 387s > 387s > # passing `family` via ... (WORKS!) 387s > myfun1 <- function(formula, design, ...) { 387s + svyglm(formula, design = design, ...) 387s + } 387s > myfun1(api00~ell+meals+mobility, design=dstrat, family = gaussian()) 387s Stratified Independent Sampling design 387s svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, 387s fpc = ~fpc) 387s 387s Call: svyglm(formula = formula, design = design, family = ..1) 387s 387s Coefficients: 387s (Intercept) ell meals mobility 387s 820.8873 -0.4806 -3.1415 0.2257 387s 387s Degrees of Freedom: 199 Total (i.e. Null); 194 Residual 387s Null Deviance: 3023000 387s Residual Deviance: 1029000 AIC: 2308 387s > 387s > # passing `family` via default argument (DOES NOT WORK!) 387s > myfun2 <- function(formula, design, family = gaussian()) { 387s + svyglm(formula, design = design, family = family) 387s + } 387s > myfun2(api00~ell+meals+mobility, design=dstrat, family = gaussian()) 387s Stratified Independent Sampling design 387s svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, 387s fpc = ~fpc) 387s 387s Call: svyglm(formula = formula, design = design, family = family) 387s 387s Coefficients: 387s (Intercept) ell meals mobility 387s 820.8873 -0.4806 -3.1415 0.2257 387s 387s Degrees of Freedom: 199 Total (i.e. Null); 194 Residual 387s Null Deviance: 3023000 387s Residual Deviance: 1029000 AIC: 2308 387s > 387s BEGIN TEST kalton.R 387s 387s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 387s Copyright (C) 2024 The R Foundation for Statistical Computing 387s Platform: s390x-ibm-linux-gnu (64-bit) 387s 387s R is free software and comes with ABSOLUTELY NO WARRANTY. 387s You are welcome to redistribute it under certain conditions. 387s Type 'license()' or 'licence()' for distribution details. 387s 387s R is a collaborative project with many contributors. 387s Type 'contributors()' for more information and 387s 'citation()' on how to cite R or R packages in publications. 387s 387s Type 'demo()' for some demos, 'help()' for on-line help, or 387s 'help.start()' for an HTML browser interface to help. 387s Type 'q()' to quit R. 387s 387s > library(survey) 387s Loading required package: grid 387s Loading required package: Matrix 388s Loading required package: survival 388s 388s Attaching package: 'survey' 388s 388s The following object is masked from 'package:graphics': 388s 388s dotchart 388s 388s > 388s > ab<-expand.grid(a=factor(1:4),b=factor(1:3)) 388s > 388s > kaltonsample<-ab[rep(1:12,c(20,50,100,30,40,140,50,100,40,310,50,70)),] 388s > Warning message: 388s In svydesign.default(id = ~1, data = kaltonsample) : 388s No weights or probabilities supplied, assuming equal probability 388s 388s > kaltonpop<-ab[rep(1:12,c(80,60,170,55,40,150,60,165,55,340,200,125)),] 388s > 388s > jointpop<-colSums(model.matrix(~a*b,kaltonpop)) 388s > marginalpop<-colSums(model.matrix(~a+b,kaltonpop)) 388s > gregpop<-colSums(model.matrix(~as.numeric(a)+as.numeric(b),kaltonpop)) 388s > 388s > dkalton<-svydesign(id=~1,data=kaltonsample) 388s > 388s > dps<-postStratify(dkalton,~a+b,xtabs(~a+b,kaltonpop)) 388s > 388s > drake<-rake(dkalton, list(~a,~b),list(xtabs(~a,kaltonpop),xtabs(~b,kaltonpop)),control=list(epsilon=0.0001)) 388s > 388s > dcalps<-calibrate(dkalton, ~a*b, jointpop) 388s > dcalrake<-calibrate(dkalton,~a+b, marginalpop, calfun="raking") 388s > dlinear<-calibrate(dkalton, ~a+b, marginalpop) 388s > 388s > dtrunclinear<-calibrate(dkalton, ~a+b, marginalpop,bounds=c(0.5,2.2)) 388s > 388s > dlogit<-calibrate(dkalton, ~a+b, marginalpop,bounds=c(0.5,2.2),calfun="logit") 388s > 388s > dgreg<-calibrate(dkalton,~as.numeric(a)+as.numeric(b), gregpop) 388s > 388s > 388s > #table A 388s > round(svytable(~a+b,dps)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 4.00 1.00 1.38 388s 2 1.20 1.07 1.10 388s 3 1.70 1.20 4.00 388s 4 1.83 1.65 1.79 388s > round(svytable(~a+b,dcalps)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 4.00 1.00 1.37 388s 2 1.20 1.07 1.10 388s 3 1.70 1.20 4.00 388s 4 1.83 1.65 1.79 388s > 388s > #table B 388s > round(svytable(~a+b,drake)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.81 1.45 2.02 388s 2 1.08 0.87 1.21 388s 3 2.20 1.76 2.45 388s 4 1.83 1.47 2.04 388s > round(svytable(~a+b,dcalrake)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.81 1.45 2.02 388s 2 1.08 0.87 1.21 388s 3 2.20 1.76 2.45 388s 4 1.83 1.47 2.04 388s > 388s > #table C 388s > round(svytable(~a+b,dlinear)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.82 1.50 1.97 388s 2 1.09 0.78 1.24 388s 3 2.19 1.88 2.34 388s 4 1.83 1.52 1.98 388s > 388s > #table D 388s > round(svytable(~a+b,dgreg)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.21 1.17 1.14 388s 2 1.43 1.40 1.36 388s 3 1.66 1.62 1.59 388s 4 1.88 1.85 1.81 388s > 388s > #table G 388s > round(svytable(~a+b,dlogit)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.87 1.46 1.98 388s 2 1.08 0.74 1.27 388s 3 2.17 2.09 2.18 388s 4 1.89 1.49 1.99 388s > 388s > #table G 388s > round(svytable(~a+b,dtrunclinear)/xtabs(~a+b,kaltonsample),2) 388s b 388s a 1 2 3 388s 1 1.81 1.48 1.99 388s 2 1.08 0.75 1.26 388s 3 2.20 2.00 2.20 388s 4 1.83 1.50 2.00 388s > 388s BEGIN TEST logranktest.R 388s 388s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 388s Copyright (C) 2024 The R Foundation for Statistical Computing 388s Platform: s390x-ibm-linux-gnu (64-bit) 388s 388s R is free software and comes with ABSOLUTELY NO WARRANTY. 388s You are welcome to redistribute it under certain conditions. 388s Type 'license()' or 'licence()' for distribution details. 388s 388s R is a collaborative project with many contributors. 388s Type 'contributors()' for more information and 388s 'citation()' on how to cite R or R packages in publications. 388s 388s Type 'demo()' for some demos, 'help()' for on-line help, or 388s 'help.start()' for an HTML browser interface to help. 388s Type 'q()' to quit R. 388s 389s > ## StackOverflow 63333282 389s > 389s > library(survey) 389s Loading required package: grid 389s Loading required package: Matrix 389s Loading required package: survival 390s 390s Attaching package: 'survey' 390s 390s > The following object is masked from 'package:graphics': 390s 390s dotchart 390s 390s D = data.frame(unique_id = 1:135, 390s + 390s + weights = rep(1,135), 390s + 390s + event_time = c(0.53512437, 1.35655869, 2.00414189, 2.37276648, 3.20343526, 0.96618494, 2.57894309, 0.94575080, 1.25347833, 1.44416450, 5.04038200, 7.80587169 , 390s + 390s + 6.53631154, 6.31914568, 7.00146597, 9.67616088, 7.94212358, 9.70693890, 10.67575835, 10.06764688, 12.29175616, 13.60092871, 13.12508566, 14.66417522, 390s + 390s + 15.35250691, 0.93368707, 0.19087611, 3.15533767, 4.40821633, 17.54334957, 17.95177642, 15.50903946, 16.48376185, 20.87956697, 21.24571398, 22.34297263, 390s + 390s + 23.36042629, 21.01760215, 23.84785038, 26.06105822, 4.16866350, 1.96922485, 0.66199008, 6.76987830, 1.55617685, 0.19095871, 3.13291784, 5.43159409, 390s + 390s + 9.55805671, 4.31437322, 0.78259860, 5.26415156, 3.45095686, 1.69128712, 8.41942426, 3.33748695, 6.08516173, 2.72897404, 0.22789783, 0.86348009, 390s + 390s + 2.35707587, 2.97477615, 12.33273800, 0.58532123, 0.14586238, 10.67948547, 4.07655972, 3.94405136, 0.37226898, 1.42558725, 1.47680658, 4.22506540, 390s + 390s + 1.56703478, 8.37484756, 12.54015087, 1.80994787, 3.66453633, 1.02834532, 1.99065652, 1.23577436, 16.21981618, 14.35039798, 4.15321606, 2.79740679, 390s + 390s + 0.35538726, 7.46823358, 1.66329088, 7.46525382, 2.62734831, 3.19057957, 0.33317193, 0.09122886, 9.14616245, 2.48542578, 2.37569263, 5.48499630, 390s + 390s + 2.22749399, 2.64816296, 0.97101545, 1.42468625, 1.27668904, 0.03692447, 1.98783210, 5.47692729, 3.88316178, 0.32921277, 1.77225345, 9.33268901, 390s + 390s + 2.44517775, 1.49813702, 2.56059172, 3.43194832, 1.22955630, 3.56263947, 9.07060099, 3.58312362, 2.22755370, 4.24783776, 3.46364804, 1.61671354, 390s + 390s + 11.10973565, 7.18764270, 1.80400046, 6.39833474, 6.72825192, 6.46063344, 5.76855531, 5.27157807, 4.66154734, 3.50019718, 2.27156678, 3.28531594, 390s + 390s + 2.35699896, 2.94956000, 8.85381736), 390s + 390s + event_flag = c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 1, 1, 0, 0, 0, 1, 390s + 390s + 1, 0, 0, 0, 0, 1, 0, 0, 1, 1, 1, 1, 1, 0, 0, 1, 0, 0, 0, 0, 0, 1, 1, 1, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 0, 1, 0, 1, 1, 1, 390s + 390s + 1, 1, 1, 0, 1, 0, 1, 0, 1, 1, 0, 1, 1, 1, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 1, 0, 1, 1, 0, 0, 0), 390s + 390s + group = c(rep("group1", 40), rep("group2", 95))) 390s > 390s > 390s > 390s > svykm_formula = as.formula("Surv(event_time, event_flag) ~ group") 390s > 390s > svy_design = svydesign( ids = ~unique_id , weights = ~weights, data = D ) 390s > 390s > a<-svylogrank(formula = svykm_formula, design = svy_design) 390s > 390s > ii<-with(D, order(event_time, event_flag)) 390s > 390s > svy_design2 = svydesign( ids = ~unique_id , weights = ~weights, data = D[ii,] ) 390s > 390s > b<-svylogrank(formula = svykm_formula, design = svy_design2) 390s > d<-svylogrank(formula = svykm_formula, design = svy_design, method = "large") 390s > 390s > f<- svylogrank(formula = svykm_formula, design = svy_design, method = "score") 390s > 390s > 390s > stopifnot(all.equal(a[[2]],b[[2]])) 390s > 390s > stopifnot(all.equal(a[[2]],d[[2]])) 390s > 390s > stopifnot(all.equal(a[[2]],f[-1])) 390s > 390s > 390s BEGIN TEST lonely.psu.R 390s 390s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 390s Copyright (C) 2024 The R Foundation for Statistical Computing 390s Platform: s390x-ibm-linux-gnu (64-bit) 390s 390s R is free software and comes with ABSOLUTELY NO WARRANTY. 390s You are welcome to redistribute it under certain conditions. 390s Type 'license()' or 'licence()' for distribution details. 390s 390s R is a collaborative project with many contributors. 390s Type 'contributors()' for more information and 390s 'citation()' on how to cite R or R packages in publications. 390s 390s Type 'demo()' for some demos, 'help()' for on-line help, or 390s 'help.start()' for an HTML browser interface to help. 390s Type 'q()' to quit R. 390s 390s > 390s > ## lonely PSUs by design 390s > library(survey) 390s Loading required package: grid 390s Loading required package: Matrix 391s Loading required package: survival 391s 391s Attaching package: 'survey' 391s 391s > The following object is masked from 'package:graphics': 391s 391s dotchart 391s 391s data(api) 391s > ## not certainty PSUs by fpc 391s > ds<-svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = apiclus1) 391s > summary(ds) 391s Stratified Independent Sampling design (with replacement) 391s svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = apiclus1) 391s Probabilities: 391s Min. 1st Qu. Median Mean 3rd Qu. Max. 391s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 391s Stratum Sizes: 391s 61 135 178 197 255 406 413 437 448 510 568 637 716 778 815 391s obs 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s design.PSU 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s actual.PSU 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s Data variables: 391s [1] "cds" "stype" "name" "sname" "snum" "dname" 391s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 391s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 391s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 391s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 391s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 391s [37] "api.stu" "fpc" "pw" 391s > 391s > options(survey.lonely.psu="fail") 391s > try(svymean(~api00,ds)) 391s > try(svymean(~api00, as.svrepdesign(ds))) 391s Error in onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (413) has only one PSU at stage 1 391s > options(survey.lonely.psu="remove") 391s Error in jknweights(design$strata[, 1], design$cluster[, 1], fpc = fpc, : 391s Stratum413has only one PSU 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.8058 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.8058 391s > options(survey.lonely.psu="certainty") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.8058 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.8058 391s > options(survey.lonely.psu="adjust") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.8281 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.8267 391s > options(survey.lonely.psu="average") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 6.0096 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.8217 391s > 391s > ## fpc specified 391s > fpc<-ifelse(apiclus1$dnum==413, 1,1000) 391s > ds<-svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = apiclus1,fpc=fpc) 391s > summary(ds) 391s Stratified Independent Sampling design 391s svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = apiclus1, 391s fpc = fpc) 391s Probabilities: 391s Min. 1st Qu. Median Mean 3rd Qu. Max. 391s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 391s Stratum Sizes: 391s 61 135 178 197 255 406 413 437 448 510 568 637 716 778 815 391s obs 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s design.PSU 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s actual.PSU 13 34 4 13 16 2 1 4 12 21 9 11 37 2 4 391s Population stratum sizes (PSUs): 391s 135 178 197 255 406 413 437 448 510 568 61 637 716 778 815 391s 1000 1000 1000 1000 1000 1 1000 1000 1000 1000 1000 1000 1000 1000 1000 391s Data variables: 391s [1] "cds" "stype" "name" "sname" "snum" "dname" 391s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 391s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 391s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 391s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 391s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 391s [37] "api.stu" "fpc" "pw" 391s > 391s > options(survey.lonely.psu="fail") 391s > try(svymean(~api00,ds)) 391s mean SE 391s api00 644.17 5.7344 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.7344 391s > options(survey.lonely.psu="remove") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.7344 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.7344 391s > options(survey.lonely.psu="certainty") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.7344 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.7344 391s > options(survey.lonely.psu="adjust") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.7344 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.7344 391s > options(survey.lonely.psu="average") 391s > svymean(~api00,ds) 391s mean SE 391s api00 644.17 5.7344 391s > svymean(~api00, as.svrepdesign(ds)) 391s mean SE 391s api00 644.17 5.7501 391s > 391s > rs<-as.svrepdesign(ds) 391s > svytotal(~api00,rs) 391s total SE 391s api00 3989986 35616 391s > SE(svytotal(~api00,subset(rs, dnum==413)))==0 391s [1] TRUE 391s > 391s > ## lonely PSUs after subsetting 391s > ds<-svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = subset(apiclus1,dnum !=413)) 391s > ds1<-ds[-31,] 391s > summary(ds1) 391s Stratified Independent Sampling design (with replacement) 391s svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = subset(apiclus1, 391s dnum != 413)) 391s Probabilities: 391s Min. 1st Qu. Median Mean 3rd Qu. Max. 391s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 391s Stratum Sizes: 391s 61 135 178 197 255 406 437 448 510 568 637 716 778 815 391s obs 13 34 4 13 16 1 4 12 21 9 11 37 2 4 391s design.PSU 13 34 4 13 16 2 4 12 21 9 11 37 2 4 391s actual.PSU 13 34 4 13 16 1 4 12 21 9 11 37 2 4 391s Data variables: 391s [1] "cds" "stype" "name" "sname" "snum" "dname" 391s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 391s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 391s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 391s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 391s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 391s [37] "api.stu" "fpc" "pw" 391s > 391s > options(survey.lonely.psu="fail") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="remove") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="certainty") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="adjust") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="average") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > 391s > ## with adjustment 391s > options(survey.adjust.domain.lonely=TRUE) 391s > ds<-svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = subset(apiclus1,dnum !=413)) 391s > ds1<-ds[-31,] 391s > summary(ds1) 391s Stratified Independent Sampling design (with replacement) 391s svydesign(id = ~1, weights = ~pw, strata = ~dnum, data = subset(apiclus1, 391s dnum != 413)) 391s Probabilities: 391s Min. 1st Qu. Median Mean 3rd Qu. Max. 391s 0.02954 0.02954 0.02954 0.02954 0.02954 0.02954 391s Stratum Sizes: 391s 61 135 178 197 255 406 437 448 510 568 637 716 778 815 391s obs 13 34 4 13 16 1 4 12 21 9 11 37 2 4 391s design.PSU 13 34 4 13 16 2 4 12 21 9 11 37 2 4 391s actual.PSU 13 34 4 13 16 1 4 12 21 9 11 37 2 4 391s Data variables: 391s [1] "cds" "stype" "name" "sname" "snum" "dname" 391s [7] "dnum" "cname" "cnum" "flag" "pcttest" "api00" 391s [13] "api99" "target" "growth" "sch.wide" "comp.imp" "both" 391s [19] "awards" "meals" "ell" "yr.rnd" "mobility" "acs.k3" 391s [25] "acs.46" "acs.core" "pct.resp" "not.hsg" "hsg" "some.col" 391s [31] "col.grad" "grad.sch" "avg.ed" "full" "emer" "enroll" 391s [37] "api.stu" "fpc" "pw" 391s > 391s > options(survey.lonely.psu="fail") 391s > try(svymean(~api00,ds1)) 391s Warning message: 391s In onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (406) has only one PSU at stage 1 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="remove") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="certainty") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 5.8909 391s > options(survey.lonely.psu="adjust") 391s > svymean(~api00,ds1) 391s Warning message: 391s In onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (406) has only one PSU at stage 1 391s Warning message: 391s In onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (406) has only one PSU at stage 1 391s mean SE 391s api00 645.14 5.9119 391s > options(survey.lonely.psu="average") 391s > svymean(~api00,ds1) 391s mean SE 391s api00 645.14 6.0914 391s > 391s Warning message: 391s In onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (406) has only one PSU at stage 1 391s Warning message: 391s In onestrat(x[index, , drop = FALSE], clusters[index], nPSU[index][1], : 391s Stratum (406) has only one PSU at stage 1 391s BEGIN TEST mtcars-var.R 391s 391s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 391s Copyright (C) 2024 The R Foundation for Statistical Computing 391s Platform: s390x-ibm-linux-gnu (64-bit) 391s 391s R is free software and comes with ABSOLUTELY NO WARRANTY. 391s You are welcome to redistribute it under certain conditions. 391s Type 'license()' or 'licence()' for distribution details. 391s 391s R is a collaborative project with many contributors. 391s Type 'contributors()' for more information and 391s 'citation()' on how to cite R or R packages in publications. 391s 391s Type 'demo()' for some demos, 'help()' for on-line help, or 391s 'help.start()' for an HTML browser interface to help. 391s Type 'q()' to quit R. 391s 392s > library(survey) 392s Loading required package: grid 392s Loading required package: Matrix 392s Loading required package: survival 393s 393s Attaching package: 'survey' 393s 393s > 393s > # don't throw an error on domains of size 1, just return NA 393s > input <- mtcars 393s > input$carb <- factor(input$carb) 393s The following object is masked from 'package:graphics': 393s 393s dotchart 393s 393s > design <- svydesign(ids = ~0, weights = NULL, data = input) 393s > svyby( 393s + ~mpg, 393s + ~carb, 393s + design, 393s + svyvar 393s + ) 393s carb mpg se 393s 1 1 36.01619 11.2823286 393s 2 2 29.94444 9.0030898 393s 3 3 1.11000 0.4604066 393s 4 4 15.29656 4.3174617 393s 6 6 NA NA 393s 8 8 NA NA 393s > 393s > 393s > ## same n with na.rm=TRUE as subset(, !is.na) 393s > input$mpg[1]<-NA 393s > design <- svydesign(ids = ~0, weights = NULL, data = input) 393s > stopifnot(all.equal(svyvar(~mpg, design, na.rm=TRUE), 393s + svyvar(~mpg, subset(design, !is.na(mpg))))) 393s > 393s BEGIN TEST multistage.R 393s 393s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 393s Copyright (C) 2024 The R Foundation for Statistical Computing 393s Platform: s390x-ibm-linux-gnu (64-bit) 393s 393s R is free software and comes with ABSOLUTELY NO WARRANTY. 393s You are welcome to redistribute it under certain conditions. 393s Type 'license()' or 'licence()' for distribution details. 393s 393s R is a collaborative project with many contributors. 393s Type 'contributors()' for more information and 393s 'citation()' on how to cite R or R packages in publications. 393s 393s Type 'demo()' for some demos, 'help()' for on-line help, or 393s 'help.start()' for an HTML browser interface to help. 393s Type 'q()' to quit R. 393s 393s > ## 393s > ## Check that multistage samples still work 393s > ## 393s > library(survey) 393s Loading required package: grid 393s Loading required package: Matrix 394s Loading required package: survival 394s 394s Attaching package: 'survey' 394s 394s > example(mu284) 394s The following object is masked from 'package:graphics': 394s 394s dotchart 394s 394s 394s mu284> data(mu284) 394s 394s mu284> (dmu284<-svydesign(id=~id1+id2,fpc=~n1+n2, data=mu284)) 394s 2 - level Cluster Sampling design 394s With (5, 15) clusters. 394s (dmu284<-svydesign(id=~id1+id2,fpc=~n1+n2, data=mu284)) 394s 394s mu284> (ytotal<-svytotal(~y1, dmu284)) 394s total SE 394s y1 15080 2274.3 394s 394s mu284> vcov(ytotal) 394s y1 394s y1 5172234 394s > 394s > 394s BEGIN TEST na_action.R 394s 394s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 394s Copyright (C) 2024 The R Foundation for Statistical Computing 394s Platform: s390x-ibm-linux-gnu (64-bit) 394s 394s R is free software and comes with ABSOLUTELY NO WARRANTY. 394s You are welcome to redistribute it under certain conditions. 394s Type 'license()' or 'licence()' for distribution details. 394s 394s R is a collaborative project with many contributors. 394s Type 'contributors()' for more information and 394s 'citation()' on how to cite R or R packages in publications. 394s 394s Type 'demo()' for some demos, 'help()' for on-line help, or 394s 'help.start()' for an HTML browser interface to help. 394s Type 'q()' to quit R. 394s 394s > ## from Terry Therneau 394s > library(survey) 394s Loading required package: grid 394s Loading required package: Matrix 395s Loading required package: survival 395s 395s Attaching package: 'survey' 395s 395s > The following object is masked from 'package:graphics': 395s 395s dotchart 395s 395s load("naa.rda") 395s > 395s > fit1e <- svyglm( pseudo ~ age34 + ccr5 + factor(times), design= adata.s,na.action=na.exclude) 395s > fit1o <- svyglm( pseudo ~ age34 + ccr5 + factor(times), design= adata.s) 395s > all.equal(coef(fit1e),coef(fit1o)) 395s [1] TRUE 395s > all.equal(vcov(fit1e),vcov(fit1o)) 395s [1] TRUE 395s > 395s BEGIN TEST newquantile.R 395s 395s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 395s Copyright (C) 2024 The R Foundation for Statistical Computing 395s Platform: s390x-ibm-linux-gnu (64-bit) 395s 395s R is free software and comes with ABSOLUTELY NO WARRANTY. 395s You are welcome to redistribute it under certain conditions. 395s Type 'license()' or 'licence()' for distribution details. 395s 395s R is a collaborative project with many contributors. 395s Type 'contributors()' for more information and 395s 'citation()' on how to cite R or R packages in publications. 395s 395s Type 'demo()' for some demos, 'help()' for on-line help, or 395s 'help.start()' for an HTML browser interface to help. 395s Type 'q()' to quit R. 395s 395s > ## quantiles with equal weights 395s > 395s > library(survey) 395s Loading required package: grid 396s Loading required package: Matrix 396s Loading required package: survival 397s 397s Attaching package: 'survey' 397s 397s The following object is masked from 'package:graphics': 397s 397s dotchart 397s 397s > data(api) 397s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 397s > 397s > 397s > for(i in 1:9){ 397s + print(i) 397s + all.equal( 397s + as.vector(coef(svyquantile(~ell, dclus1, c(0.2,0.5,0.9), qrule=paste0("hf",i)))), 397s + as.vector(quantile(apiclus1$ell, c(0.2,0.5,0.9), type=i)) 397s + ) 397s + 397s + } 397s [1] 1 397s [1] 2 397s [1] 3 397s [1] 4 397s [1] 5 397s [1] 6 397s [1] 7 397s [1] 8 397s [1] 9 397s > 397s BEGIN TEST nwts-cch.R 397s 397s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 397s Copyright (C) 2024 The R Foundation for Statistical Computing 397s Platform: s390x-ibm-linux-gnu (64-bit) 397s 397s R is free software and comes with ABSOLUTELY NO WARRANTY. 397s You are welcome to redistribute it under certain conditions. 397s Type 'license()' or 'licence()' for distribution details. 397s 397s R is a collaborative project with many contributors. 397s Type 'contributors()' for more information and 397s 'citation()' on how to cite R or R packages in publications. 397s 397s Type 'demo()' for some demos, 'help()' for on-line help, or 397s 'help.start()' for an HTML browser interface to help. 397s Type 'q()' to quit R. 397s 397s > library(survey) 397s Loading required package: grid 397s Loading required package: Matrix 398s Loading required package: survival 398s 398s Attaching package: 'survey' 398s 398s > library(survival) 398s > data(nwtco) 398s The following object is masked from 'package:graphics': 398s 398s dotchart 398s 398s > 398s > ntwco<-subset(nwtco, !is.na(edrel)) 398s > 398s > load("nwtco-subcohort.rda") 398s > nwtco$subcohort<-subcohort 398s > 398s > d_BorganII <- twophase(id=list(~seqno,~seqno), 398s + strata=list(NULL,~interaction(instit,rel)), 398s + data=nwtco, subset=~I(rel |subcohort)) 398s > 398s > ##Coefficient results same as Splus with code from 398s > ## http://faculty.washington.edu/norm/software.html 398s > ## SE slightly larger due to using sandwich variance. 398s > 398s > svycoxph(Surv(edrel, rel)~factor(stage)+factor(histol)+I(age/12), design=d_BorganII) 398s Call: 398s svycoxph(formula = Surv(edrel, rel) ~ factor(stage) + factor(histol) + 398s I(age/12), design = d_BorganII) 398s 399s coef exp(coef) se(coef) robust se z p 399s factor(stage)2 0.46286 1.58861 0.23762 0.18087 2.559 0.01049 399s factor(stage)3 0.58309 1.79156 0.23965 0.17848 3.267 0.00109 399s factor(stage)4 1.05967 2.88541 0.26182 0.20524 5.163 2.43e-07 399s factor(histol)2 1.59744 4.94035 0.17688 0.13342 11.973 < 2e-16 399s I(age/12) 0.02994 1.03039 0.02942 0.03337 0.897 0.36972 399s 399s Likelihood ratio test= on 5 df, p= 399s n= 1062, number of events= 571 399s > 399s > ## 399s > ## This gives higher standard errors. calibrate() does not recompute the 399s > ## finite population correction if a calibration variable happens to predict 399s > ## sampling perfectly. It probably should. 399s > ## 399s > d_BorganIIps<-calibrate(twophase(id=list(~seqno,~seqno), 399s + strata=list(NULL,~rel), 399s + data=nwtco, subset=~I(rel |subcohort)), 399s + phase=2, formula=~interaction(instit,rel), 399s + epsilon=1e-10) 399s > 399s > svycoxph(Surv(edrel, rel)~factor(stage)+factor(histol)+I(age/12), design=d_BorganIIps) 399s Call: 399s svycoxph(formula = Surv(edrel, rel) ~ factor(stage) + factor(histol) + 399s I(age/12), design = d_BorganIIps) 399s 399s coef exp(coef) se(coef) robust se z p 399s factor(stage)2 0.46286 1.58861 0.23762 0.18076 2.561 0.01045 399s factor(stage)3 0.58309 1.79156 0.23965 0.17838 3.269 0.00108 399s factor(stage)4 1.05967 2.88541 0.26182 0.20513 5.166 2.39e-07 399s factor(histol)2 1.59744 4.94035 0.17688 0.13044 12.246 < 2e-16 399s I(age/12) 0.02994 1.03039 0.02942 0.03331 0.899 0.36876 399s 399s Likelihood ratio test= on 5 df, p= 399s n= 1062, number of events= 571 399s > 399s BEGIN TEST nwts.R 399s 399s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 399s Copyright (C) 2024 The R Foundation for Statistical Computing 399s Platform: s390x-ibm-linux-gnu (64-bit) 399s 399s R is free software and comes with ABSOLUTELY NO WARRANTY. 399s You are welcome to redistribute it under certain conditions. 399s Type 'license()' or 'licence()' for distribution details. 399s 399s R is a collaborative project with many contributors. 399s Type 'contributors()' for more information and 399s 'citation()' on how to cite R or R packages in publications. 399s 399s Type 'demo()' for some demos, 'help()' for on-line help, or 399s 'help.start()' for an HTML browser interface to help. 399s Type 'q()' to quit R. 399s 399s > 399s > ## examples from Breslow & Chatterjee: Applied Statistics 1999 No. 4, p458 399s > ## data from Norman Breslow's web page. 399s > library(survey) 399s Loading required package: grid 399s Loading required package: Matrix 400s Loading required package: survival 400s 400s Attaching package: 'survey' 400s 400s > load("nwts.rda") 400s > nwtsnb<-nwts 400s > The following object is masked from 'package:graphics': 400s 400s dotchart 400s 400s nwtsnb$case<-nwts$case-nwtsb$case 400s > nwtsnb$control<-nwts$control-nwtsb$control 400s > 400s > a<-rbind(nwtsb,nwtsnb) 400s > a$in.ccs<-rep(c(TRUE,FALSE),each=16) 400s > 400s > b<-rbind(a,a) 400s > b$rel<-rep(c(1,0),each=32) 400s > b$n<-ifelse(b$rel,b$case,b$control) 400s > 400s > index<-rep(1:64,b$n) 400s > 400s > nwt.exp<-b[index,c(1:3,6,7)] 400s > nwt.exp$id<-1:4088 400s > 400s > dccs2<-twophase(id=list(~id,~id),subset=~in.ccs, 400s + strata=list(NULL,~interaction(instit,rel)),data=nwt.exp) 401s > 401s > dccs8<-twophase(id=list(~id,~id),subset=~in.ccs, 401s + strata=list(NULL,~interaction(instit,stage,rel)),data=nwt.exp) 401s > 401s > gccs8<-calibrate(dccs2,phase=2,formula=~interaction(instit,stage,rel)) 401s > 401s > summary(svyglm(rel~factor(stage)*factor(histol),family=quasibinomial,design=dccs2)) 401s 401s Call: 401s svyglm(formula = rel ~ factor(stage) * factor(histol), design = dccs2, 401s family = quasibinomial) 401s 401s Survey design: 401s twophase2(id = id, strata = strata, probs = probs, fpc = fpc, 401s subset = subset, data = data) 401s 401s Coefficients: 401s Estimate Std. Error t value Pr(>|t|) 401s (Intercept) -2.5701 0.1288 -19.955 < 2e-16 *** 401s factor(stage)2 0.5482 0.1979 2.769 0.005708 ** 401s factor(stage)3 0.4791 0.2032 2.359 0.018515 * 401s factor(stage)4 1.0037 0.2592 3.872 0.000114 *** 401s factor(histol)2 1.3505 0.3107 4.346 1.51e-05 *** 401s factor(stage)2:factor(histol)2 0.1152 0.4410 0.261 0.793876 401s factor(stage)3:factor(histol)2 0.5066 0.4241 1.194 0.232548 401s factor(stage)4:factor(histol)2 0.9785 0.6214 1.575 0.115615 401s --- 401s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 401s 401s (Dispersion parameter for quasibinomial family taken to be 1.000876) 401s 401s Number of Fisher Scoring iterations: 4 401s 401s > summary(svyglm(rel~factor(stage)*factor(histol),family=quasibinomial,design=dccs8)) 401s 401s Call: 401s svyglm(formula = rel ~ factor(stage) * factor(histol), design = dccs8, 401s family = quasibinomial) 401s 401s Survey design: 401s twophase2(id = id, strata = strata, probs = probs, fpc = fpc, 401s subset = subset, data = data) 401s 401s Coefficients: 401s Estimate Std. Error t value Pr(>|t|) 401s (Intercept) -2.71604 0.10827 -25.085 < 2e-16 *** 401s factor(stage)2 0.78141 0.14726 5.306 1.35e-07 *** 401s factor(stage)3 0.80093 0.15250 5.252 1.80e-07 *** 401s factor(stage)4 1.07293 0.17817 6.022 2.33e-09 *** 401s factor(histol)2 1.45836 0.31780 4.589 4.96e-06 *** 401s factor(stage)2:factor(histol)2 -0.04743 0.43495 -0.109 0.913 401s factor(stage)3:factor(histol)2 0.28064 0.41298 0.680 0.497 401s factor(stage)4:factor(histol)2 0.90983 0.63774 1.427 0.154 401s --- 401s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 401s 401s (Dispersion parameter for quasibinomial family taken to be 1.000876) 401s 401s Number of Fisher Scoring iterations: 4 401s 401s > summary(svyglm(rel~factor(stage)*factor(histol),family=quasibinomial,design=gccs8)) 401s 401s Call: 401s svyglm(formula = rel ~ factor(stage) * factor(histol), design = gccs8, 401s family = quasibinomial) 401s 401s Survey design: 401s calibrate(dccs2, phase = 2, formula = ~interaction(instit, stage, 401s rel)) 401s 401s Coefficients: 401s Estimate Std. Error t value Pr(>|t|) 401s (Intercept) -2.71604 0.10878 -24.968 < 2e-16 *** 401s factor(stage)2 0.78141 0.14729 5.305 1.35e-07 *** 401s factor(stage)3 0.80093 0.15212 5.265 1.68e-07 *** 401s factor(stage)4 1.07293 0.17905 5.993 2.77e-09 *** 401s factor(histol)2 1.45836 0.31757 4.592 4.88e-06 *** 401s factor(stage)2:factor(histol)2 -0.04743 0.43432 -0.109 0.913 401s factor(stage)3:factor(histol)2 0.28064 0.41231 0.681 0.496 401s factor(stage)4:factor(histol)2 0.90983 0.63187 1.440 0.150 401s --- 401s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 401s 401s (Dispersion parameter for quasibinomial family taken to be 1.000876) 401s 401s Number of Fisher Scoring iterations: 4 401s 401s > 401s > ## check subsets of calibrated designs. 401s > summary(svyglm(rel~factor(stage), 401s + family=quasibinomial,design=subset(dccs8,histol==1))) 401s 401s Call: 401s svyglm(formula = rel ~ factor(stage), design = subset(dccs8, 401s histol == 1), family = quasibinomial) 401s 401s Survey design: 401s subset(dccs8, histol == 1) 401s 401s Coefficients: 401s Estimate Std. Error t value Pr(>|t|) Warning messages: 401s 1: In `[.twophase2`(x, r, ) : 1 strata have only one PSU in this subset. 401s 2: In summary.glm(g) : 401s observations with zero weight not used for calculating dispersion 401s 3: In summary.glm(glm.object) : 401s observations with zero weight not used for calculating dispersion 401s 4: In `[.twophase2`(design, nas == 0, ) : 401s 1 strata have only one PSU in this subset. 401s 5: In `[.twophase2`(design, nas == 0, ) : 401s 1 strata have only one PSU in this subset. 401s 401s (Intercept) -2.7160 0.1083 -25.085 < 2e-16 *** 401s factor(stage)2 0.7814 0.1473 5.306 1.48e-07 *** 401s factor(stage)3 0.8009 0.1525 5.252 1.97e-07 *** 401s factor(stage)4 1.0729 0.1782 6.022 2.73e-09 *** 401s --- 401s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 401s 401s (Dispersion parameter for quasibinomial family taken to be 1.001333) 401s 401s Number of Fisher Scoring iterations: 4 401s 401s > summary(svyglm(rel~factor(stage), 401s + family=quasibinomial,design=subset(gccs8,histol==1))) 401s 401s Call: 401s svyglm(formula = rel ~ factor(stage), design = subset(gccs8, 401s histol == 1), family = quasibinomial) 401s 401s Survey design: 401s subset(gccs8, histol == 1) 401s 401s Coefficients: 401s Estimate Std. Error t value Pr(>|t|) 401s (Intercept) -2.7160 0.1082 -25.105 < 2e-16 *** 401s factor(stage)2 0.7814 0.1457 5.363 1.10e-07 *** 401s factor(stage)3 0.8009 0.1504 5.324 1.34e-07 *** 401s factor(stage)4 1.0729 0.1759 6.101 1.70e-09 *** 401s --- 401s Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 401s 401s (Dispersion parameter for quasibinomial family taken to be 1.001333) 401s 401s Number of Fisher Scoring iterations: 4 401s 401s > 401s > 401s Warning messages: 401s 1: In summary.glm(g) : 401s observations with zero weight not used for calculating dispersion 401s 2: In summary.glm(glm.object) : 401s observations with zero weight not used for calculating dispersion 401s BEGIN TEST poisson.R 401s 401s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 401s Copyright (C) 2024 The R Foundation for Statistical Computing 401s Platform: s390x-ibm-linux-gnu (64-bit) 401s 401s R is free software and comes with ABSOLUTELY NO WARRANTY. 401s You are welcome to redistribute it under certain conditions. 401s Type 'license()' or 'licence()' for distribution details. 401s 401s R is a collaborative project with many contributors. 401s Type 'contributors()' for more information and 401s 'citation()' on how to cite R or R packages in publications. 401s 401s Type 'demo()' for some demos, 'help()' for on-line help, or 401s 'help.start()' for an HTML browser interface to help. 401s Type 'q()' to quit R. 401s 401s > ## check poisson sampling 401s > library(survey) 401s Loading required package: grid 401s Loading required package: Matrix 402s Loading required package: survival 402s 402s Attaching package: 'survey' 402s 402s The following object is masked from 'package:graphics': 402s 402s dotchart 402s 402s > data(api) 402s > set.seed(2021-7-15) 402s > apipop$prob<-apipop$api00/1000 402s > insample<-rbinom(nrow(apipop),1,apipop$prob) 402s > apipois<-apipop[insample,] 402s > des<-svydesign(id=~1, prob=~prob, pps=poisson_sampling(apipois$prob), data=apipois) 402s > 402s > stopifnot(isTRUE(all.equal( 402s + as.vector(SE(svytotal(~api00,design=des))), 402s + as.vector(sqrt(sum( (apipois$api00*weights(des))^2*(1-apipois$prob)))) 403s + ))) 403s > 403s > 403s BEGIN TEST pps.R 403s 403s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 403s Copyright (C) 2024 The R Foundation for Statistical Computing 403s Platform: s390x-ibm-linux-gnu (64-bit) 403s 403s R is free software and comes with ABSOLUTELY NO WARRANTY. 403s You are welcome to redistribute it under certain conditions. 403s Type 'license()' or 'licence()' for distribution details. 403s 403s R is a collaborative project with many contributors. 403s Type 'contributors()' for more information and 403s 'citation()' on how to cite R or R packages in publications. 403s 403s Type 'demo()' for some demos, 'help()' for on-line help, or 403s 'help.start()' for an HTML browser interface to help. 403s Type 'q()' to quit R. 403s 403s > library(survey) 403s Loading required package: grid 403s Loading required package: Matrix 404s Loading required package: survival 404s 404s Attaching package: 'survey' 404s 404s > data(election) 404s The following object is masked from 'package:graphics': 404s 404s dotchart 404s 404s > 404s > dpps<- svydesign(id=~1, weights=~wt, fpc=~p, data=election_pps, pps="brewer") 404s > dppswr <-svydesign(id=~1, weights=~wt, data=election_pps) 404s > svytotal(~Bush+Kerry+Nader, dpps) 404s total SE 404s Bush 64518472 2447629 404s Kerry 51202102 2450787 404s Nader 478530 102420 404s > svytotal(~Bush+Kerry+Nader, dppswr) 404s total SE 404s Bush 64518472 2671455 404s Kerry 51202102 2679433 404s Nader 478530 105303 404s > 404s > ##subsets 404s > svytotal(~Bush+Kerry+Nader, subset(dpps, Nader>0)) 404s total SE 404s Bush 34944285 5399833 404s Kerry 25581714 4028434 404s Nader 478530 102420 404s > 404s > ##multistage: should agree with STRS analysis 404s > data(api) 404s > dclus2<-svydesign(id = ~dnum + snum, fpc = ~fpc1 + fpc2, data = apiclus2) 404s > dclus2pps<-svydesign(id = ~dnum + snum, fpc = ~I(40/fpc1) + I(pmin(1,5/fpc2)), data = apiclus2) 404s > 404s > all.equal(svytotal(~sch.wide,dclus2), svytotal(~sch.wide,dclus2pps)) 404s [1] TRUE 404s > all.equal(svymean(~sch.wide,dclus2), svymean(~sch.wide,dclus2pps)) 404s [1] TRUE 404s > all.equal(svytotal(~enroll,dclus2), svytotal(~enroll,dclus2pps)) 404s [1] TRUE 404s > 404s > ## the new without-replacement methods 404s > data(election) 404s > dpps_br<- svydesign(id=~1, fpc=~p, data=election_pps, pps="brewer") 404s > dpps_ov<- svydesign(id=~1, fpc=~p, data=election_pps, pps="overton") 404s > dpps_hr<- svydesign(id=~1, fpc=~p, data=election_pps, pps=HR(sum(election$p^2)/40)) 404s > dpps_hr1<- svydesign(id=~1, fpc=~p, data=election_pps, pps=HR()) 404s > dpps_ht<- svydesign(id=~1, fpc=~p, data=election_pps, pps=ppsmat(election_jointprob)) 404s > ## Yates-Grundy type 404s > dpps_yg<- svydesign(id=~1, fpc=~p, data=election_pps, pps=ppsmat(election_jointprob),variance="YG") 404s > dpps_hryg<- svydesign(id=~1, fpc=~p, data=election_pps, pps=HR(sum(election$p^2)/40),variance="YG") 404s > 404s > ## The with-replacement approximation 404s > svytotal(~Bush+Kerry+Nader, dpps_ht) 404s total SE 404s Bush 64518472 2604404 404s Kerry 51202102 2523712 404s Nader 478530 102326 404s > svytotal(~Bush+Kerry+Nader, dpps_yg) 404s total SE 404s Bush 64518472 2406526 404s Kerry 51202102 2408091 404s Nader 478530 101664 404s > svytotal(~Bush+Kerry+Nader, dpps_hr) 404s total SE 404s Bush 64518472 2624662 404s Kerry 51202102 2525222 404s Nader 478530 102793 404s > svytotal(~Bush+Kerry+Nader, dpps_hryg) 404s total SE 404s Bush 64518472 2436738 404s Kerry 51202102 2439845 404s Nader 478530 102016 404s > svytotal(~Bush+Kerry+Nader, dpps_hr1) 404s total SE 404s Bush 64518472 2472753 404s Kerry 51202102 2426842 404s Nader 478530 102595 404s > svytotal(~Bush+Kerry+Nader, dpps_br) 404s total SE 404s Bush 64518472 2447629 404s Kerry 51202102 2450787 404s Nader 478530 102420 404s > svytotal(~Bush+Kerry+Nader, dpps_ov) 404s total SE 404s Bush 64518472 2939608 404s Kerry 51202102 1964632 404s Nader 478530 104373 404s > 404s > ## subsets 404s > svytotal(~Bush+Kerry+Nader, subset(dpps_ht, Nader>0)) 404s total SE 404s Bush 34944285 5406348 404s Kerry 25581714 4047741 404s Nader 478530 102326 404s > svytotal(~Bush+Kerry+Nader, subset(dpps_hryg, Nader>0)) 404s total SE 404s Bush 34944285 5377659 404s Kerry 25581714 4010908 404s Nader 478530 102016 404s > 404s > ## counts 404s > svyby(~Bush+Kerry+Nader,~I(Nader>0), unwtd.count,design=dpps_ht) 404s I(Nader > 0) counts se 404s FALSE FALSE 19 0 404s TRUE TRUE 21 0 404s > 404s BEGIN TEST quantile.R 404s 404s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 404s Copyright (C) 2024 The R Foundation for Statistical Computing 404s Platform: s390x-ibm-linux-gnu (64-bit) 404s 404s R is free software and comes with ABSOLUTELY NO WARRANTY. 404s You are welcome to redistribute it under certain conditions. 404s Type 'license()' or 'licence()' for distribution details. 404s 404s R is a collaborative project with many contributors. 404s Type 'contributors()' for more information and 404s 'citation()' on how to cite R or R packages in publications. 404s 404s Type 'demo()' for some demos, 'help()' for on-line help, or 404s 'help.start()' for an HTML browser interface to help. 404s Type 'q()' to quit R. 404s 404s > library(survey) 404s Loading required package: grid 404s Loading required package: Matrix 405s Loading required package: survival 406s 406s Attaching package: 'survey' 406s 406s The following object is masked from 'package:graphics': 406s 406s dotchart 406s 406s > set.seed(42) 406s > 406s > df<-data.frame(x=exp(rnorm(1000))) 406s > df$y<-round(df$x,1) 406s > ddf<-svydesign(id=~1,data=df) 406s Warning message: 406s > rdf<-as.svrepdesign(ddf) 406s In svydesign.default(id = ~1, data = df) : 406s No weights or probabilities supplied, assuming equal probability 406s > 406s > SE(oldsvyquantile(~x,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE)) 406s 0.01 0.1 0.5 0.9 0.99 407s 0.01543792 0.01264453 0.03386225 0.16131948 2.10605799 407s > 407s > SE(oldsvyquantile(~x,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE)) 407s x 407s q0.01 0.01554946 407s q0.1 0.01425828 407s q0.5 0.03428012 407s q0.9 0.16457488 407s q0.99 1.88672412 407s > 407s > SE(oldsvyquantile(~x,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,df=Inf)) 407s 0.01 0.1 0.5 0.9 0.99 407s 0.01545209 0.01265608 0.03388011 0.16145776 2.10061576 407s > 407s > SE(oldsvyquantile(~x,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,df=Inf)) 407s x 407s q0.01 0.01556240 407s q0.1 0.01420086 407s q0.5 0.03430175 407s q0.9 0.16461019 407s q0.99 1.88818131 407s > 407s > 407s > oldsvyquantile(~y,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,ties="rounded",interval.type="betaWald") 407s $quantiles 407s 0.01 0.1 0.5 0.9 0.99 407s y 0.02352941 0.2230769 0.9340909 3.55 9.4 407s 407s $CIs 407s , , y 407s 407s 0.01 0.1 0.5 0.9 0.99 407s (lower 0.01594200 0.2020115 0.8578143 3.207543 7.568142 407s upper) 0.03287947 0.2467045 1.0059815 3.862241 14.978632 407s 407s 407s > 407s > oldsvyquantile(~y,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE) 407s Statistic: 407s y 407s q0.01 0.1 407s q0.1 0.3 407s q0.5 1.0 407s q0.9 3.6 407s q0.99 9.4 407s SE: 407s y 407s q0.01 0.02547977 407s q0.1 0.02547977 407s q0.5 0.02547977 407s q0.9 0.15287859 407s q0.99 1.88302540 407s > 407s > oldsvyquantile(~y,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,ties="rounded",interval.type="betaWald",df=Inf) 407s $quantiles 407s 0.01 0.1 0.5 0.9 0.99 407s y 0.02352941 0.2230769 0.9340909 3.55 9.4 407s 407s $CIs 407s , , y 407s 407s 0.01 0.1 0.5 0.9 0.99 407s (lower 0.01594200 0.2020115 0.8578143 3.207543 7.568142 407s upper) 0.03287947 0.2467045 1.0059815 3.862241 14.978632 407s 407s 407s > 407s > oldsvyquantile(~y,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE, df=Inf) 407s Statistic: 407s y 407s q0.01 0.1 407s q0.1 0.3 407s q0.5 1.0Warning message: 407s In svydesign.default(id = ~1, data = df) : 407s No weights or probabilities supplied, assuming equal probability 407s 407s q0.9 3.6 407s q0.99 9.4 407s SE: 407s y 407s q0.01 0.02551067 407s q0.1 0.02551067 407s q0.5 0.02551067 407s q0.9 0.15306404 407s q0.99 1.88450896 407s > 407s > 407s > 407s > df<-data.frame(x=exp(rnorm(20))) 407s > df$y<-round(df$x,1) 407s > ddf<-svydesign(id=~1,data=df) 407s > rdf<-as.svrepdesign(ddf) 407s > SE(oldsvyquantile(~x,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE)) 407s 0.01 0.1 0.5 0.9 0.99 407s 0.03576771 0.07329496 0.30149917 2.03440784 1.88468597 407s > 407s > SE(oldsvyquantile(~x,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE)) 407s x 407s q0.01 0.00000000 407s q0.1 0.04598541 407s q0.5 0.25943731 407s q0.9 2.12343073 407s q0.99 1.91998924 407s > 407s > SE(oldsvyquantile(~x,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,df=Inf)) 407s 0.01 0.1 0.5 0.9 0.99 407s 0.03637398 0.07470310 0.29938115 2.16381289 2.00708994 407s > 407s > SE(oldsvyquantile(~x,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,df=Inf)) 407s x 407s q0.01 0.00000000 407s q0.1 0.04732818 407s q0.5 0.24957966 407s q0.9 2.25211815 407s q0.99 2.04043154 407s > 407s > 407s > oldsvyquantile(~y,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,ties="rounded",interval.type="betaWald") 407s $quantiles 407s 0.01 0.1 0.5 0.9 0.99 407s y 0.1 0.15 0.75 2.4 8.68 407s 407s $CIs 407s , , y 407s 407s 0.01 0.1 0.5 0.9 0.99 407s (lower 0.100000 0.1000000 0.3674054 1.352279 0.5674674 407s upper) 1.132533 0.3464541 1.6303784 8.473337 10.2000000 407s 407s 407s > 407s > oldsvyquantile(~y,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE) 407s Statistic: 407s y 407s q0.01 0.10 407s q0.1 0.20 407s q0.5 0.80 407s q0.9 2.40 407s q0.99 8.68 407s SE: 407s y 407s q0.01 0.00000000 407s q0.1 0.02611112 407s q0.5 0.26542051 407s q0.9 2.10908603 407s q0.99 1.91777710 407s > 407s > oldsvyquantile(~y,ddf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE,ties="rounded",interval.type="betaWald",df=Inf) 407s $quantiles 407s 0.01 0.1 0.5 0.9 0.99 407s y 0.1 0.15 0.75 2.4 8.68 407s 407s $CIs 407s , , y 407s 407s 0.01 0.1 0.5 0.9 0.99 407s (lower 0.100000 0.1000000 0.3674054 1.352279 0.5674674 407s upper) 1.132533 0.3464541 1.6303784 8.473337 10.2000000 407s 407s 407s > 407s > oldsvyquantile(~y,rdf, c(0.01,0.1,0.5,0.9,0.99),ci=TRUE, df=Inf) 407s Statistic: 407s y 407s q0.01 0.10 407s q0.1 0.20 407s q0.5 0.80 407s q0.9 2.40 407s q0.99 8.68 407s SE: 407s y 407s q0.01 0.00000000 407s q0.1 0.02551067 407s q0.5 0.25244616 407s q0.9 2.23558589 407s q0.99 2.03881114 407s > 407s BEGIN TEST quantiles-chile.R 407s 407s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 407s Copyright (C) 2024 The R Foundation for Statistical Computing 407s Platform: s390x-ibm-linux-gnu (64-bit) 407s 407s R is free software and comes with ABSOLUTELY NO WARRANTY. 407s You are welcome to redistribute it under certain conditions. 407s Type 'license()' or 'licence()' for distribution details. 407s 407s R is a collaborative project with many contributors. 407s Type 'contributors()' for more information and 407s 'citation()' on how to cite R or R packages in publications. 407s 407s Type 'demo()' for some demos, 'help()' for on-line help, or 407s 'help.start()' for an HTML browser interface to help. 407s Type 'q()' to quit R. 407s 407s > library(survey) 407s Loading required package: grid 407s Loading required package: Matrix 408s Loading required package: survival 408s 408s Attaching package: 'survey' 408s 408s > datos <- readRDS("datos_ejemplo.rds") 408s The following object is masked from 'package:graphics': 408s 408s dotchart 408s 408s > 408s > design <- svydesign(id = ~id_directorio, strata = ~estrato, weights = ~f_pers, check.strata = TRUE, data = datos) 408s > set.seed(234262762) 408s > repdesign <- as.svrepdesign(design, type = "subbootstrap", replicates=20) 408s > options(survey.lonely.psu="remove") 408s > 408s > values<-datos$ing_t_p[datos$CL_GRUPO_OCU_08=="ISCO08_6"] 408s > 408s > suppressWarnings({ 408s + f0<-coef(svyquantile(~ing_t_p, subset(design,CL_GRUPO_OCU_08=="ISCO08_6"),quantiles=c(0.5), qrule="math")) 408s + f0.5<-coef(svyquantile(~ing_t_p, subset(design,CL_GRUPO_OCU_08=="ISCO08_6"),quantiles=c(0.5), qrule="school")) 408s + }) 408s > all.equal(c(values[1],mean(values)), as.vector(c(f0,f0.5))) 408s [1] TRUE 408s > 408s > suppressWarnings({ 408s + f0<-coef(svyquantile(~ing_t_p, subset(repdesign,CL_GRUPO_OCU_08=="ISCO08_6"),quantiles=c(0.5), qrule="math")) 408s + f0.5<-coef(svyquantile(~ing_t_p, subset(repdesign,CL_GRUPO_OCU_08=="ISCO08_6"),quantiles=c(0.5), qrule="school")) 408s + }) 408s > all.equal(c(values[1],mean(values)), as.vector(c(f0,f0.5))) 408s [1] TRUE 408s > 408s BEGIN TEST rakecheck.R 408s 408s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 408s Copyright (C) 2024 The R Foundation for Statistical Computing 408s Platform: s390x-ibm-linux-gnu (64-bit) 408s 408s R is free software and comes with ABSOLUTELY NO WARRANTY. 408s You are welcome to redistribute it under certain conditions. 408s Type 'license()' or 'licence()' for distribution details. 408s 408s R is a collaborative project with many contributors. 408s Type 'contributors()' for more information and 408s 'citation()' on how to cite R or R packages in publications. 408s 408s Type 'demo()' for some demos, 'help()' for on-line help, or 408s 'help.start()' for an HTML browser interface to help. 408s Type 'q()' to quit R. 408s 409s > library(survey) 409s Loading required package: grid 409s Loading required package: Matrix 409s Loading required package: survival 410s 410s Attaching package: 'survey' 410s 410s The following object is masked from 'package:graphics': 410s 410s dotchart 410s 410s > 410s > data(api) 410s > dclus1 <- svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 410s > rclus1 <- as.svrepdesign(dclus1) 410s > 410s > ## population marginal totals for each stratum 410s > pop.types <- data.frame(stype=c("E","H","M"), Freq=c(4421,755,1018)) 410s > pop.schwide <- data.frame(sch.wide=c("No","Yes"), Freq=c(1072,5122)) 410s > 410s > rclus1r <- rake(rclus1, list(~stype,~sch.wide), list(pop.types, pop.schwide)) 410s > 410s > svymean(~api00, rclus1r) 410s mean SE 410s api00 641.23 26.873 410s > svytotal(~enroll, rclus1r) 410s total SE 410s enroll 3647300 463511 410s > 410s > ff<-~stype+sch.wide 410s > poptotals<-colSums(model.matrix(ff,model.frame(ff,apipop))) 410s > rclus1g<-calibrate(rclus1, ~stype+sch.wide, poptotals,calfun="raking") 410s > 410s > svymean(~api00,rclus1g) 410s mean SE 410s api00 641.23 26.874 410s > svytotal(~enroll,rclus1g) 410s total SE 410s enroll 3647280 463582 410s > 410s > summary(weights(rclus1g)/weights(rclus1r)) 410s V1 V2 V3 V4 V5 V6 410s Min. :1 Min. :1 Min. :1 Min. :1 Min. :1 Min. :1 410s 1st Qu.:1 1st Qu.:1 1st Qu.:1 1st Qu.:1 1st Qu.:1 1st Qu.:1 410s Median :1 Median :1 Median :1 Median :1 Median :1 Median :1 410s Mean :1 Mean :1 Mean :1 Mean :1 Mean :1 Mean :1 410s 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 410s Max. :1 Max. :1 Max. :1 Max. :1 Max. :1 Max. :1 410s NA's :11 NA's :4 NA's :2 NA's :13 NA's :2 NA's :4 410s V7 V8 V9 V10 V11 410s Min. :1 Min. :1 Min. :1 Min. :1 Min. :1 410s 1st Qu.:1 1st Qu.:1 1st Qu.:1 1st Qu.:1 1st Qu.:1 410s Median :1 Median :1 Median :1 Median :1 Median :1 410s Mean :1 Mean :1 Mean :1 Mean :1 Mean :1 410s 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 410s Max. :1 Max. :1 Max. :1 Max. :1 Max. :1 410s NA's :4 NA's :16 NA's :9 NA's :34 NA's :21 410s V12 V13 V14 V15 410s Min. :0.9997 Min. :1 Min. :1 Min. :1 410s 1st Qu.:1.0001 1st Qu.:1 1st Qu.:1 1st Qu.:1 410s Median :1.0001 Median :1 Median :1 Median :1 410s Mean :1.0000 Mean :1 Mean :1 Mean :1 410s 3rd Qu.:1.0001 3rd Qu.:1 3rd Qu.:1 3rd Qu.:1 410s Max. :1.0002 Max. :1 Max. :1 Max. :1 410s NA's :37 NA's :13 NA's :1 NA's :12 410s > 410s > 410s > ## Do it for a design without replicate weights 410s > dclus1r<-rake(dclus1, list(~stype,~sch.wide), list(pop.types, pop.schwide)) 410s > 410s > svymean(~api00, dclus1r) 410s mean SE 410s api00 641.23 23.704 410s > svytotal(~enroll, dclus1r) 410s total SE 410s enroll 3647300 400603 410s > 410s > dclus1g<-calibrate(dclus1, ~stype+sch.wide, poptotals,calfun="raking") 410s > 410s > svymean(~api00,dclus1g) 410s mean SE 410s api00 641.23 23.704 410s > svytotal(~enroll,dclus1g) 410s total SE 410s enroll 3647280 400603 410s > 410s > summary(weights(dclus1g)/weights(dclus1r)) 410s Min. 1st Qu. Median Mean 3rd Qu. Max. 410s 1 1 1 1 1 1 410s > 410s > 410s > 410s > ## Example of raking with partial joint distributions 410s > pop.table <- xtabs(~stype+sch.wide,apipop) 410s > pop.imp<-data.frame(comp.imp=c("No","Yes"),Freq=c(1712,4482)) 410s > dclus1r2<-rake(dclus1, list(~stype+sch.wide, ~comp.imp), 410s + list(pop.table, pop.imp)) 410s > svymean(~api00, dclus1r2) 410s mean SE 410s api00 642.62 22.732 410s > 410s > ff1 <-~stype*sch.wide+comp.imp 410s > 410s > poptotals1<-colSums(model.matrix(ff1,model.frame(ff1,apipop))) 410s > dclus1g2<-calibrate(dclus1, ~stype*sch.wide+comp.imp, poptotals1, calfun="raking") 410s > 410s > svymean(~api00, dclus1g2) 410s mean SE 410s api00 642.61 22.731 410s > 410s > summary(weights(dclus1r2)/weights(dclus1g2)) 410s Min. 1st Qu. Median Mean 3rd Qu. Max. 410s 0.999 1.000 1.000 1.000 1.000 1.002 410s > 410s BEGIN TEST raowuboot.R 410s 410s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 410s Copyright (C) 2024 The R Foundation for Statistical Computing 410s Platform: s390x-ibm-linux-gnu (64-bit) 410s 410s R is free software and comes with ABSOLUTELY NO WARRANTY. 410s You are welcome to redistribute it under certain conditions. 410s Type 'license()' or 'licence()' for distribution details. 410s 410s R is a collaborative project with many contributors. 410s Type 'contributors()' for more information and 410s 'citation()' on how to cite R or R packages in publications. 410s 410s Type 'demo()' for some demos, 'help()' for on-line help, or 410s 'help.start()' for an HTML browser interface to help. 410s Type 'q()' to quit R. 410s 410s > ## regression test for bug reported by Richard Valliant 410s > library(survey) 410s Loading required package: grid 410s Loading required package: Matrix 411s Loading required package: survival 411s 411s Attaching package: 'survey' 411s 411s The following object is masked from 'package:graphics': 411s 411s dotchart 411s 411s > s<-subbootweights(c(1,1),1:2, 50) 411s > stopifnot(all(s$repweights$weights %in% c(0,2))) 411s > 411s BEGIN TEST regTermTest-missing.R 411s 411s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 411s Copyright (C) 2024 The R Foundation for Statistical Computing 411s Platform: s390x-ibm-linux-gnu (64-bit) 411s 411s R is free software and comes with ABSOLUTELY NO WARRANTY. 411s You are welcome to redistribute it under certain conditions. 411s Type 'license()' or 'licence()' for distribution details. 411s 411s R is a collaborative project with many contributors. 411s Type 'contributors()' for more information and 411s 'citation()' on how to cite R or R packages in publications. 411s 411s Type 'demo()' for some demos, 'help()' for on-line help, or 411s 'help.start()' for an HTML browser interface to help. 411s Type 'q()' to quit R. 411s 411s > library(survey) 411s Loading required package: grid 411s Loading required package: Matrix 412s Loading required package: survival 413s 413s Attaching package: 'survey' 413s 413s The following object is masked from 'package:graphics': 413s 413s dotchart 413s 413s > data(nhanes) 413s > design <- svydesign(id=~SDMVPSU, strata=~SDMVSTRA, weights=~WTMEC2YR, nest=TRUE,data=nhanes) 413s > 413s > a<-svyglm(formula = I(race == 1) ~ HI_CHOL + agecat + RIAGENDR, design = subset(design,!is.na(HI_CHOL)), family=quasibinomial) 413s > b<-svyglm(formula = I(race == 1) ~ HI_CHOL + agecat + RIAGENDR, design =design , family=quasibinomial) 413s > 413s > ta<-regTermTest(a, ~HI_CHOL) 413s > tb<-regTermTest(b, ~HI_CHOL) 413s > 413s > stopifnot(isTRUE(all.equal(ta$chisq, tb$chisq))) 413s > stopifnot(isTRUE(all.equal(ta$lambda, tb$lambda))) 413s > 413s BEGIN TEST regpredict.R 413s 413s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 413s Copyright (C) 2024 The R Foundation for Statistical Computing 413s Platform: s390x-ibm-linux-gnu (64-bit) 413s 413s R is free software and comes with ABSOLUTELY NO WARRANTY. 413s You are welcome to redistribute it under certain conditions. 413s Type 'license()' or 'licence()' for distribution details. 413s 413s R is a collaborative project with many contributors. 413s Type 'contributors()' for more information and 413s 'citation()' on how to cite R or R packages in publications. 413s 413s Type 'demo()' for some demos, 'help()' for on-line help, or 413s 'help.start()' for an HTML browser interface to help. 413s Type 'q()' to quit R. 413s 413s > library(survey) 413s Loading required package: grid 413s Loading required package: Matrix 414s Loading required package: survival 414s 414s Attaching package: 'survey' 414s 414s > The following object is masked from 'package:graphics': 414s 414s dotchart 414s 414s data(api) 414s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 414s > 414s > 414s > ## regression estimator of total, three ways 414s > pop<-data.frame(enroll=sum(apipop$enroll, na.rm=TRUE)) 414s > npop <- sum(!is.na(apipop$enroll)) 414s > 414s > api.reg <- svyglm(api.stu~enroll, design=dstrat) 414s > a <- predict(api.reg, newdata=pop, total=npop) 414s > b <- svytotal(~api.stu, calibrate(dstrat, ~enroll, pop=c(npop, pop$enroll))) 414s > 414s > all.equal(as.vector(coef(a)),as.vector(coef(b))) 414s [1] TRUE 414s > all.equal(as.vector(SE(a)), as.vector(SE(b))) 414s [1] TRUE 414s > if(!is.null(getOption("DEBUG"))){ ## uses 6194x6194 matrix 414s + d <- predict(api.reg, newdata=na.omit(apipop[,"enroll",drop=FALSE])) 414s + all.equal(as.vector(coef(a)), as.vector(sum(coef(d)))) 414s + all.equal(as.vector(SE(a)), as.vector(sqrt(sum(vcov(d))))) 414s + } 414s > 414s > ## classical ratio estimator, four ways. 414s > api.reg2 <- svyglm(api.stu~enroll-1, design=dstrat, 414s + family=quasi(link="identity", var="mu")) 414s > 414s > a <- predict(api.reg2, newdata=pop, total=npop) 414s > b <- svytotal(~api.stu, 414s + calibrate(dstrat, ~enroll-1, pop= pop$enroll, variance=2)) 414s > e <- predict(svyratio(~api.stu, ~enroll, dstrat),total=pop$enroll) 414s > 414s > all.equal(as.vector(coef(a)),as.vector(coef(b))) 414s [1] TRUE 414s > all.equal(as.vector(SE(a)), as.vector(SE(b))) 414s [1] TRUE 414s > all.equal(as.vector(coef(a)),as.vector(e$total)) 414s [1] TRUE 414s > all.equal(as.vector(SE(a)), as.vector(e$se)) 414s [1] TRUE 414s > if(!is.null(getOption("DEBUG"))){## uses 6194x6194 matrix 414s + d <- predict(api.reg2, newdata=na.omit(apipop[,"enroll",drop=FALSE])) 414s + all.equal(as.vector(coef(a)), as.vector(sum(coef(d)))) 414s + all.equal(as.vector(SE(a)), as.vector(sqrt(sum(vcov(d))))) 414s + } 414s > 414s BEGIN TEST rss_scores.R 414s 414s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 414s Copyright (C) 2024 The R Foundation for Statistical Computing 414s Platform: s390x-ibm-linux-gnu (64-bit) 414s 414s R is free software and comes with ABSOLUTELY NO WARRANTY. 414s You are welcome to redistribute it under certain conditions. 414s Type 'license()' or 'licence()' for distribution details. 414s 414s R is a collaborative project with many contributors. 414s Type 'contributors()' for more information and 414s 'citation()' on how to cite R or R packages in publications. 414s 414s Type 'demo()' for some demos, 'help()' for on-line help, or 414s 'help.start()' for an HTML browser interface to help. 414s Type 'q()' to quit R. 414s 414s > ## Example from Rao, Scott, and Skinner 1998 Statistica Sinica 414s > library(survey) 414s Loading required package: grid 414s Loading required package: Matrix 415s Loading required package: survival 415s > data(myco) 415s 415s Attaching package: 'survey' 415s 415s The following object is masked from 'package:graphics': 415s 415s dotchart 415s 415s > dmyco<-svydesign(id=~1, strata=~interaction(Age,leprosy),weights=~wt,data=myco) 415s > m_full<-svyglm(leprosy~I((Age+7.5)^-2)+Scar, family=quasibinomial, design=dmyco) 415s > m_null<-svyglm(leprosy~I((Age+7.5)^-2), family=quasibinomial, design=dmyco) 415s > 415s > stopifnot(isTRUE(all.equal(coef(m_null), c(`(Intercept)`=-4.6, `I((Age + 7.5)^-2)`=-427),tol=1e-2))) 415s > 415s > s<-svyscoretest(m_full, ~Scar) 415s > stopifnot(abs(s[1]-10.73)<0.05) 415s > 415s > t<-svyscoretest(m_full,~Scar,method="individual") 415s > stopifnot(abs(coef(t)- -32.61)<0.1) 415s > stopifnot(abs(vcov(t)-99.1)<0.1) 415s > 415s > 415s BEGIN TEST scoping.R 416s 416s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 416s Copyright (C) 2024 The R Foundation for Statistical Computing 416s Platform: s390x-ibm-linux-gnu (64-bit) 416s 416s R is free software and comes with ABSOLUTELY NO WARRANTY. 416s You are welcome to redistribute it under certain conditions. 416s Type 'license()' or 'licence()' for distribution details. 416s 416s R is a collaborative project with many contributors. 416s Type 'contributors()' for more information and 416s 'citation()' on how to cite R or R packages in publications. 416s 416s Type 'demo()' for some demos, 'help()' for on-line help, or 416s 'help.start()' for an HTML browser interface to help. 416s Type 'q()' to quit R. 416s 416s > Loading required package: grid 416s 416s > ## regression test for testing regression 416s > 416s > library(survey) 416s Loading required package: Matrix 417s Loading required package: survival 417s 417s Attaching package: 'survey' 417s 417s The following object is masked from 'package:graphics': 417s 417s dotchart 417s 417s > data(api) 417s > 417s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 417s > 417s > 417s > f<-function(){ 417s + form<-acs.46~stype 417s + svyglm(formula=form, design = dstrat) 417s + } 417s > 417s > g<-function(form){ 417s + svyglm(formula=form, design = dstrat) 417s + } 417s > f() 417s Stratified Independent Sampling design 417s svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, 417s fpc = ~fpc) 417s 417s Call: svyglm(formula = form, design = dstrat) 417s 417s Coefficients: 417s (Intercept) stypeH stypeM 417s 28.7449 0.7551 0.4022 417s 417s Degrees of Freedom: 133 Total (i.e. Null); 129 Residual 417s (66 observations deleted due to missingness) 417s Null Deviance: 1838 417s Residual Deviance: 1835 AIC: 719.8 417s > g(acs.46~stype) 417s Stratified Independent Sampling design 417s svydesign(id = ~1, strata = ~stype, weights = ~pw, data = apistrat, 417s fpc = ~fpc) 417s 417s Call: svyglm(formula = form, design = dstrat) 417s 417s Coefficients: 417s (Intercept) stypeH stypeM 417s 28.7449 0.7551 0.4022 417s 417s Degrees of Freedom: 133 Total (i.e. Null); 129 Residual 417s (66 observations deleted due to missingness) 417s Null Deviance: 1838 417s Residual Deviance: 1835 AIC: 719.8 417s > 417s > f<-function(){ 417s + form<-Surv(acs.46)~stype 417s + svycoxph(formula=form, design = dstrat) 417s + } 417s > 417s > g<-function(form){ 417s + svycoxph(formula=form, design = dstrat) 417s + } 417s > 417s > f() 417s Call: 417s svycoxph(formula = form, design = dstrat) 417s 417s coef exp(coef) se(coef) robust se z p 417s stypeH -0.6766 0.5083 1.0208 0.6652 -1.017 0.309 417s stypeM -0.2509 0.7781 0.2308 0.2089 -1.201 0.230 417s 417s Likelihood ratio test= on 2 df, p= 417s n= 134, number of events= 134 417s (66 observations deleted due to missingness) 417s > g(Surv(acs.46)~stype) 417s Call: 417s svycoxph(formula = form, design = dstrat) 417s 417s coef exp(coef) se(coef) robust se z p 417s stypeH -0.6766 0.5083 1.0208 0.6652 -1.017 0.309 417s stypeM -0.2509 0.7781 0.2308 0.2089 -1.201 0.230 417s 417s Likelihood ratio test= on 2 df, p= 417s n= 134, number of events= 134 417s (66 observations deleted due to missingness) 417s > 417s > ## check coxph for a single predictor 417s > svycoxph(Surv(acs.46)~api00,design=dstrat) 417s Call: 417s svycoxph(formula = Surv(acs.46) ~ api00, design = dstrat) 417s 417s coef exp(coef) se(coef) robust se z p 417s api00 6.060e-06 1.000e+00 6.244e-04 7.492e-04 0.008 0.994 417s 417s Likelihood ratio test= on 1 df, p= 417s n= 134, number of events= 134 417s (66 observations deleted due to missingness) 417s > 417s BEGIN TEST survcurve.R 417s 417s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 417s Copyright (C) 2024 The R Foundation for Statistical Computing 417s Platform: s390x-ibm-linux-gnu (64-bit) 417s 417s R is free software and comes with ABSOLUTELY NO WARRANTY. 417s You are welcome to redistribute it under certain conditions. 417s Type 'license()' or 'licence()' for distribution details. 417s 417s R is a collaborative project with many contributors. 417s Type 'contributors()' for more information and 417s 'citation()' on how to cite R or R packages in publications. 417s 417s Type 'demo()' for some demos, 'help()' for on-line help, or 417s 'help.start()' for an HTML browser interface to help. 417s Type 'q()' to quit R. 417s 417s > library(survey) 417s Loading required package: grid 417s Loading required package: Matrix 418s Loading required package: survival 418s 418s Attaching package: 'survey' 418s 418s > library(survival) 418s > 418s > pbc2<-rbind(pbc,pbc) 418s The following object is masked from 'package:graphics': 418s 418s dotchart 418s 418s > pbc2$id<-rep(1:418,2) 418s > Warning message: 418s In svydesign.default(id = ~1, data = pbc) : 418s No weights or probabilities supplied, assuming equal probability 418s Warning message: 418s In svydesign.default(id = ~id, data = pbc2) : 418s No weights or probabilities supplied, assuming equal probability 418s 418s > dpbc1<-svydesign(id=~1, data=pbc) 418s > dpbc2<-svydesign(id=~id, data=pbc2) 418s > 418s > s1<-svykm(Surv(time,status>0)~1, subset(dpbc1, bili>6), se=TRUE) 418s > s2<-svykm(Surv(time,status>0)~1, subset(dpbc2, bili>6), se=TRUE) 418s > 418s > (c1<-confint(s1,(1:5)*365)) 418s 0.025 0.975 418s 365 0.6446215 0.8594153 418s 730 0.5410938 0.7766848 418s 1095 0.2683127 0.5103356 418s 1460 0.1444731 0.3722001 418s 1825 0.1009672 0.3204713 418s > (c2<-confint(s2,(1:5)*365)) 418s 0.025 0.975 418s 365 0.6446215 0.8594153 418s 730 0.5410938 0.7766848 418s 1095 0.2683127 0.5103356 418s 1460 0.1444731 0.3722001 418s 1825 0.1009672 0.3204713 418s > all.equal(c1, c2) 418s [1] TRUE 418s > 418s > m1<-svycoxph(Surv(time,status>0)~log(bili), design=dpbc1) 418s > m2<-svycoxph(Surv(time,status>0)~log(bili), design=dpbc2) 418s > 418s > d<-data.frame(bili=c(5,10)) 418s > p1<-predict(m1, se=TRUE, newdata=d,type="curve") 419s > p2<-predict(m2, se=TRUE, newdata=d,type="curve") 420s > 420s > (pc1<-confint(p1[[1]],(1:5)*365)) 420s 0.025 0.975 420s 365 0.8410027 0.9266263 420s 730 0.7371114 0.8548312 420s 1095 0.5517779 0.7018583 420s 1460 0.4335073 0.5992819 420s 1825 0.3260899 0.5046241 420s > (pc2<-confint(p2[[1]],(1:5)*365)) 420s 0.025 0.975 420s 365 0.8409490 0.9267054 420s 730 0.7370152 0.8549432 420s 1095 0.5515848 0.7019513 420s 1460 0.4332252 0.5992968 420s 1825 0.3257172 0.5045795 420s > all.equal(pc1, pc2) 420s [1] "Mean relative difference: 0.0002070722" 420s > 420s > (q1<-quantile(p1[[2]])) 420s 0.75 0.5 0.25 420s 489 930 1492 420s > (q2<-quantile(p2[[2]])) 420s 0.75 0.5 0.25 420s 489 930 1492 420s > all.equal(q1,q2) 420s [1] TRUE 420s > 420s BEGIN TEST svyby-strings.R 420s 420s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 420s Copyright (C) 2024 The R Foundation for Statistical Computing 420s Platform: s390x-ibm-linux-gnu (64-bit) 420s 420s R is free software and comes with ABSOLUTELY NO WARRANTY. 420s You are welcome to redistribute it under certain conditions. 420s Type 'license()' or 'licence()' for distribution details. 420s 420s R is a collaborative project with many contributors. 420s Type 'contributors()' for more information and 420s 'citation()' on how to cite R or R packages in publications. 420s 420s Type 'demo()' for some demos, 'help()' for on-line help, or 420s 'help.start()' for an HTML browser interface to help. 420s Type 'q()' to quit R. 420s 420s > 420s > ## check that stringsAsFactors fixes the string levels problem 420s > data(api, package = "survey") 420s > des <- survey::svydesign(id = ~dnum, weights = ~pw, data = apiclus1, fpc = ~fpc) 422s > est0 <- 422s + survey::svyby(design=des, formula=~cname, by=~both, FUN=survey::svymean, keep.var=TRUE, stringsAsFactors=TRUE) 422s > 422s > stopifnot(isTRUE(all(dim(est0)==c(2,23)))) 422s > 422s BEGIN TEST svyby_bug.R 422s 422s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 422s Copyright (C) 2024 The R Foundation for Statistical Computing 422s Platform: s390x-ibm-linux-gnu (64-bit) 422s 422s R is free software and comes with ABSOLUTELY NO WARRANTY. 422s You are welcome to redistribute it under certain conditions. 422s Type 'license()' or 'licence()' for distribution details. 422s 422s R is a collaborative project with many contributors. 422s Type 'contributors()' for more information and 422s 'citation()' on how to cite R or R packages in publications. 422s 422s Type 'demo()' for some demos, 'help()' for on-line help, or 422s 'help.start()' for an HTML browser interface to help. 422s Type 'q()' to quit R. 422s 422s > library(survey) 422s Loading required package: grid 422s Loading required package: Matrix 423s Loading required package: survival 423s 423s Attaching package: 'survey' 423s 423s The following object is masked from 'package:graphics': 423s 423s dotchart 423s 423s > options(warn=2) 423s > 423s > ## Caused warnings and unhelpful results in 4.1_1 (Guilherme Jacob) 423s > data(api) 423s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 423s > svyby(~api99, ~stype, dclus1, svymean ) 423s stype api99 se 423s E E 607.7917 22.81660 423s H H 595.7143 41.76400 423s M M 608.6000 32.56064 423s > 423s > set.seed(123) 423s > apiclus1$api99[ sample.int( nrow(apiclus1) , 5 ) ] <- NA 423s > dclus1.na <-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 423s > 423s > # subsetting w/ na.rm = FALSE... 423s > svymean( ~api99 , subset( dclus1.na , stype == "E" ) , na.rm = FALSE ) 423s mean SE 423s api99 NA NaN 423s > svymean( ~api99 , subset( dclus1.na , stype == "H" ) , na.rm = FALSE ) 423s mean SE 423s api99 595.71 41.764 423s > svymean( ~api99 , subset( dclus1.na , stype == "M" ) , na.rm = FALSE ) 423s mean SE 423s api99 NA NaN 423s > 423s > # ... looks like this: 423s > svyby(~api99, ~stype, dclus1.na , svymean ) 423s stype api99 se 423s E E NA NaN 423s H H 595.7143 41.764 423s M M NA NaN 423s > 423s > # subsetting w/ na.rm = TRUE... 423s > svymean( ~api99 , subset( dclus1.na , stype == "E" ) , na.rm = TRUE ) 423s mean SE 423s api99 606.53 22.901 423s > svymean( ~api99 , subset( dclus1.na , stype == "H" ) , na.rm = TRUE ) 423s mean SE 423s api99 595.71 41.764 423s > svymean( ~api99 , subset( dclus1.na , stype == "M" ) , na.rm = TRUE ) 423s mean SE 423s api99 613.39 33.224 423s > 423s > # ... looks like this 423s > svyby(~api99, ~stype, dclus1.na , svymean , na.rm = TRUE ) 423s stype api99 se 423s E E 606.5319 22.90084 423s H H 595.7143 41.76400 423s M M 613.3913 33.22358 423s > 423s > # Without missing values, this works: 423s > svyby(~api99, ~stype, dclus1 , svymean , na.rm = TRUE , covmat = TRUE ) 423s stype api99 se 423s E E 607.7917 22.81660 423s H H 595.7143 41.76400 423s M M 608.6000 32.56064 423s > 423s > # ... but this breaks! 423s > svyby(~api99, ~stype, dclus1.na , svymean , na.rm = TRUE , covmat = TRUE ) 423s stype api99 se 423s E E 606.5319 22.90084 423s H H 595.7143 41.76400 423s M M 613.3913 33.22358 423s > 423s > # ... and i don't think this is the expected behavior 423s > svyby( ~api99, ~stype, dclus1.na , svymean , na.rm.all = TRUE , covmat = TRUE ) 423s stype api99 se 423s E E NA NaN 423s H H 595.7143 41.764 423s M M NA NaN 423s > svyby( ~api99, ~stype, dclus1.na , svymean , na.rm.all = TRUE , na.rm = TRUE , covmat = TRUE ) 423s stype api99 se 423s E E 606.5319 22.90084 423s H H 595.7143 41.76400 423s M M 613.3913 33.22358 423s > 423s > 423s > ## Now some more as tests 423s > svyby(~api99, ~stype, dclus1.na , svytotal , na.rm = TRUE , covmat = TRUE ) 423s stype api99 se 423s E E 2894629.0 792809.8 423s H H 282283.9 101492.9 423s M M 477513.4 107555.5 423s > svyby(~api99, ~stype, dclus1.na , svyratio , na.rm = TRUE , denominator=~api00, covmat = TRUE ) 423s stype api99/api00 se.api99/api00 423s E E 0.9367750 0.006365702 423s H H 0.9630485 0.010520785 423s M M 0.9682246 0.009390982 423s > 423s > ff<-function(f,d,...,na.rm=TRUE) svyglm(f,d,...) 423s > svyby(api99~1, ~stype, dclus1.na , ff , na.rm = TRUE , covmat = TRUE ) 423s stype (Intercept) se.(Intercept) 423s E E 606.5319 22.90084 423s H H 595.7143 41.76400 423s M M 613.3913 33.22358 423s > 423s BEGIN TEST svyby_se.R 423s 423s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 423s Copyright (C) 2024 The R Foundation for Statistical Computing 423s Platform: s390x-ibm-linux-gnu (64-bit) 423s 423s R is free software and comes with ABSOLUTELY NO WARRANTY. 423s You are welcome to redistribute it under certain conditions. 423s Type 'license()' or 'licence()' for distribution details. 423s 423s R is a collaborative project with many contributors. 423s Type 'contributors()' for more information and 423s 'citation()' on how to cite R or R packages in publications. 423s 423s Type 'demo()' for some demos, 'help()' for on-line help, or 423s 'help.start()' for an HTML browser interface to help. 423s Type 'q()' to quit R. 423s 423s > library(survey) 423s Loading required package: grid 423s Loading required package: Matrix 424s Loading required package: survival 424s 424s Attaching package: 'survey' 424s 424s The following object is masked from 'package:graphics': 424s 424s dotchart 424s 424s > data(api) 424s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 424s > 424s > a<-svyby(~enroll,~stype,design=dstrat,svytotal,vartype=c("ci","se")) 424s > b<-svyby(~enroll,~stype,design=dstrat,svytotal,vartype=c("se","ci")) 424s > 424s > 424s > stopifnot(all.equal(SE(a),SE(b))) 424s > 424s BEGIN TEST svycontrast.R 424s 424s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 424s Copyright (C) 2024 The R Foundation for Statistical Computing 424s Platform: s390x-ibm-linux-gnu (64-bit) 424s 424s R is free software and comes with ABSOLUTELY NO WARRANTY. 424s You are welcome to redistribute it under certain conditions. 424s Type 'license()' or 'licence()' for distribution details. 424s 424s R is a collaborative project with many contributors. 424s Type 'contributors()' for more information and 424s 'citation()' on how to cite R or R packages in publications. 424s 424s Type 'demo()' for some demos, 'help()' for on-line help, or 424s 'help.start()' for an HTML browser interface to help. 424s Type 'q()' to quit R. 424s 425s > library(survey) 425s Loading required package: grid 425s Loading required package: Matrix 425s Loading required package: survival 426s 426s Attaching package: 'survey' 426s 426s > data(api) 426s The following object is masked from 'package:graphics': 426s 426s dotchart 426s 426s > dclus2<-svydesign(id=~dnum+snum, weights=~pw, data=apiclus2) 426s > rclus2<-as.svrepdesign(dclus2) 426s > model<-svyglm(formula = api00 ~ ell + meals + mobility, design = rclus2) 426s > svycontrast(model, c(ell=1,meals=0)) 426s contrast SE 426s contrast -2.0592 1.6177 426s > a<-svycontrast(model, c(0,1,0,0)) 426s > 426s > model2<-svyglm(formula = api00 ~ ell + meals + mobility, design = rclus2,return.replicates=TRUE) 426s > svycontrast(model2, c(ell=1,meals=0)) 426s contrast SE 426s contrast -2.0592 1.6177 426s > a2<-svycontrast(model2, c(0,1,0,0)) 426s > stopifnot(!is.null(a2$replicates)) 426s > 426s BEGIN TEST svyivreg-var.R 426s 426s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 426s Copyright (C) 2024 The R Foundation for Statistical Computing 426s Platform: s390x-ibm-linux-gnu (64-bit) 426s 426s R is free software and comes with ABSOLUTELY NO WARRANTY. 426s You are welcome to redistribute it under certain conditions. 426s Type 'license()' or 'licence()' for distribution details. 426s 426s R is a collaborative project with many contributors. 426s Type 'contributors()' for more information and 426s 'citation()' on how to cite R or R packages in publications. 426s 426s Type 'demo()' for some demos, 'help()' for on-line help, or 426s 'help.start()' for an HTML browser interface to help. 426s Type 'q()' to quit R. 426s 426s > 426s > library(survey) 426s Loading required package: grid 426s Loading required package: Matrix 427s Loading required package: survival 427s 427s Attaching package: 'survey' 427s 427s > data(api) 427s The following object is masked from 'package:graphics': 427s 427s dotchart 427s 427s > dstrat<-svydesign(id=~1,strata=~stype, weights=~pw, data=apistrat, fpc=~fpc) 427s > a<-summary(svyglm(api00~ell+meals+mobility, design=dstrat)) 427s > b<- summary(svyivreg(api00~ell+meals+mobility, design=dstrat)) 427s > stopifnot(isTRUE(all.equal(a$cov.scaled, b$vcov))) 427s > 427s BEGIN TEST svyivreg.R 427s 427s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 427s Copyright (C) 2024 The R Foundation for Statistical Computing 427s Platform: s390x-ibm-linux-gnu (64-bit) 427s 427s R is free software and comes with ABSOLUTELY NO WARRANTY. 427s You are welcome to redistribute it under certain conditions. 427s Type 'license()' or 'licence()' for distribution details. 427s 427s R is a collaborative project with many contributors. 427s Type 'contributors()' for more information and 427s 'citation()' on how to cite R or R packages in publications. 427s 427s Type 'demo()' for some demos, 'help()' for on-line help, or 427s 'help.start()' for an HTML browser interface to help. 427s Type 'q()' to quit R. 427s 427s > library(survey) 427s Loading required package: grid 427s Loading required package: Matrix 428s Loading required package: survival 428s > library(AER) 428s 428s Attaching package: 'survey' 428s 428s The following object is masked from 'package:graphics': 428s 428s dotchart 428s 428s Loading required package: car 428s Loading required package: carData 428s Loading required package: lmtest 428s Loading required package: zoo 428s 428s Attaching package: 'zoo' 428s 428s The following objects are masked from 'package:base': 428s 428s as.Date, as.Date.numeric 428s 428s > 428s > load("cigsw.rda") 428s > 428s > des<-svydesign(id=~1, weights=~wt, data=cigsw) 428s > m<-svyivreg(log(packs) ~ log(rprice) + log(rincome) | log(rincome) + tdiff + I(tax/cpi), design=des) 428s > 428s > all.equal(as.vector(coef(m)), c(10.42009 , -1.588135, 0.6140887),tolerance=1e-6) 428s [1] TRUE 428s > all.equal(as.vector(SE(m)), c( 1.047699, .3394232, .3614382 ),tolerance=1e-6) 428s Loading required package: sandwich 428s [1] TRUE 428s > 428s BEGIN TEST svyolr-rake-subset.R 428s 428s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 428s Copyright (C) 2024 The R Foundation for Statistical Computing 428s Platform: s390x-ibm-linux-gnu (64-bit) 428s 428s R is free software and comes with ABSOLUTELY NO WARRANTY. 428s You are welcome to redistribute it under certain conditions. 428s Type 'license()' or 'licence()' for distribution details. 428s 428s R is a collaborative project with many contributors. 428s Type 'contributors()' for more information and 428s 'citation()' on how to cite R or R packages in publications. 428s 428s Type 'demo()' for some demos, 'help()' for on-line help, or 428s 'help.start()' for an HTML browser interface to help. 428s Type 'q()' to quit R. 428s 429s > library(survey) 429s Loading required package: grid 429s Loading required package: Matrix 430s Loading required package: survival 430s 430s Attaching package: 'survey' 430s 430s The following object is masked from 'package:graphics': 430s 430s dotchart 430s 430s > data(api) 430s > dclus1 <- svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 430s > 430s > dclus1<-update(dclus1, mealcat=cut(meals,c(0,25,50,75,100))) 430s > 430s > ## population marginal totals for each stratum 430s > pop.types <- data.frame(stype=c("E","H","M"), Freq=c(4421,755,1018)) 430s > pop.schwide <- data.frame(sch.wide=c("No","Yes"), Freq=c(1072,5122)) 430s > 430s > 430s > ## rake with the population totals 430s > dclus1r<-rake(dclus1, list(~stype,~sch.wide), list(pop.types, pop.schwide)) 430s > 430s > # works 430s > m <- svyolr(mealcat~avg.ed+mobility+stype, design=dclus1) 430s > 430s > # fails in 4.1 (should work because svyolr's default na.action is na.omit) 430s > m2 <- svyolr(mealcat~avg.ed+mobility+stype, design=dclus1r) 430s > 430s > # fails in 4.1 (should work because NA values are subsetted out) 430s > m3 <- svyolr(mealcat~avg.ed+mobility+stype, design=subset( dclus1r , !is.na( avg.ed ) ) ) 430s > 430s BEGIN TEST svyolr.R 430s 430s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 430s Copyright (C) 2024 The R Foundation for Statistical Computing 430s Platform: s390x-ibm-linux-gnu (64-bit) 430s 430s R is free software and comes with ABSOLUTELY NO WARRANTY. 430s You are welcome to redistribute it under certain conditions. 430s Type 'license()' or 'licence()' for distribution details. 430s 430s R is a collaborative project with many contributors. 430s Type 'contributors()' for more information and 430s 'citation()' on how to cite R or R packages in publications. 430s 430s Type 'demo()' for some demos, 'help()' for on-line help, or 430s 'help.start()' for an HTML browser interface to help. 430s Type 'q()' to quit R. 430s 430s > library(survey) 430s Loading required package: grid 430s Loading required package: Matrix 431s Loading required package: survival 431s 431s Attaching package: 'survey' 431s 431s > 431s > The following object is masked from 'package:graphics': 431s 431s dotchart 431s 431s ################################################################################ 431s > # Example from svyolr: runs OK 431s > data(api) 431s > dclus1<-svydesign(id=~dnum, weights=~pw, data=apiclus1, fpc=~fpc) 431s > dclus1<-update(dclus1, mealcat=cut(meals,c(0,25,50,75,100))) 431s > 431s > m<-svyolr(mealcat~avg.ed+mobility+stype, design=dclus1) 431s > m 431s Call: 431s svyolr(mealcat ~ avg.ed + mobility + stype, design = dclus1) 431s 431s Coefficients: 431s avg.ed mobility stypeH stypeM 431s -2.6999217 0.0325042 -1.7574715 -0.6191463 431s 431s Intercepts: 431s (0,25]|(25,50] (25,50]|(50,75] (50,75]|(75,100] 431s -8.857919 -6.586464 -4.924938 431s > 431s > ## Use regTermTest for testing multiple parameters 431s > test<-regTermTest(m, ~avg.ed+stype, method="LRT") 431s > ################################################################################ 431s > 431s > ################################################################################ 431s > # If we wrap everything into a function: error b/c it looks for design variable 431s > # dclus1 in .GlobalEnv 431s > 431s > foo <- function(x){ 431s + dclus1<-svydesign(id=~dnum, weights=~pw, data=x, fpc=~fpc) 431s + dclus1<-update(dclus1, mealcat=cut(meals,c(0,25,50,75,100))) 431s + 431s + m<-svyolr(mealcat~avg.ed+mobility+stype, design=dclus1) 431s + ## Use regTermTest for testing multiple parameters 431s + regTermTest(m, ~avg.ed+stype, method="LRT") 431s + } 431s > 431s > # OK 431s > foo(apiclus1) 431s Working (Rao-Scott+F) LRT for avg.ed stype 431s in svyolr(formula = mealcat ~ avg.ed + mobility + stype, design = dclus1) 431s Working 2logLR = 0.6580304 p= 0.73257 431s (scale factors: 2.7 0.22 0.11 ); denominator df= 10 431s > 431s > # Clean-up everything but apiclus1 and foo 431s > rm(list = setdiff(ls(),c('apiclus1','foo','test'))) 431s > 431s > # Error 431s > test2<-foo(apiclus1) 431s > ################################################################################ 431s > all.equal(test,test2) 431s [1] TRUE 431s > 431s > 432s BEGIN TEST toy_example_for_postStratify.R 432s 432s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 432s Copyright (C) 2024 The R Foundation for Statistical Computing 432s Platform: s390x-ibm-linux-gnu (64-bit) 432s 432s R is free software and comes with ABSOLUTELY NO WARRANTY. 432s You are welcome to redistribute it under certain conditions. 432s Type 'license()' or 'licence()' for distribution details. 432s 432s R is a collaborative project with many contributors. 432s Type 'contributors()' for more information and 432s 'citation()' on how to cite R or R packages in publications. 432s 432s Type 'demo()' for some demos, 'help()' for on-line help, or 432s 'help.start()' for an HTML browser interface to help. 432s Type 'q()' to quit R. 432s 432s > library(survey) 432s Loading required package: grid 432s Loading required package: Matrix 433s Loading required package: survival 433s 433s Attaching package: 'survey' 433s 433s > 433s > # Dummy data for testing nonresponse adjustments 433s > toy <- data.frame(id = 1:10, 433s + dummy = 1, 433s The following object is masked from 'package:graphics': 433s 433s dotchart 433s 433s + class = c(rep("A", 5), rep("B", 5)), 433s + responded = c(rep(TRUE, 8), FALSE, FALSE), 433s + weight = rep(100, 10)) 433s > 433s > # With jackknife replicate weights 433s > toy_repweights <- matrix(rep(1000/9, 100), nrow = 10) 433s > diag(toy_repweights) <- rep(0, 10) 433s > 433s > # Scramble up which person is in which jackknife group 433s > toy_repweights <- toy_repweights[sample(1:10, size = 10), ] 433s > 433s > toy_design <- svrepdesign(variables = toy[, 1:4], 433s + weights = toy$weight, 433s + repweights = toy_repweights, 433s + type = "JK1", 433s + scale = 0.9) 433s > 433s > # Get the sum of the weights for the full sample 433s > poptotals <- as.data.frame(svyby(formula = ~dummy, 433s + by = ~class, 433s + design = toy_design, 433s + FUN = survey::svytotal)) 433s > 433s > poptotals$Freq <- poptotals$dummy 433s > poptotals$dummy <- NULL 433s > poptotals$se <- NULL 433s > 433s > # Adjust the weights of the responding sample to match to the full sample 433s > adjusted <- postStratify(design = subset(toy_design, responded), 433s + strata = ~class, 433s + population = poptotals) 433s > 433s > # This works for the weights... 433s > svyby(formula = ~dummy, 433s + by = ~class, 433s + design = adjusted, 433s + FUN = survey::svytotal) 433s class dummy se 433s A A 500 0 433s B B 500 0 433s > 433s > # ...and some, but not all, the replicate weights 433s > stopifnot(all.equal(colSums(toy_design$repweights), colSums(adjusted$repweights))) 433s > 433s > 433s > 433s BEGIN TEST twophase.R 433s 433s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 433s Copyright (C) 2024 The R Foundation for Statistical Computing 433s Platform: s390x-ibm-linux-gnu (64-bit) 433s 433s R is free software and comes with ABSOLUTELY NO WARRANTY. 433s You are welcome to redistribute it under certain conditions. 433s Type 'license()' or 'licence()' for distribution details. 433s 433s R is a collaborative project with many contributors. 433s Type 'contributors()' for more information and 433s 'citation()' on how to cite R or R packages in publications. 433s 433s Type 'demo()' for some demos, 'help()' for on-line help, or 433s 'help.start()' for an HTML browser interface to help. 433s Type 'q()' to quit R. 433s 433s > library(survey) 433s Loading required package: grid 433s Loading required package: Matrix 434s Loading required package: survival 434s 434s Attaching package: 'survey' 434s 434s The following object is masked from 'package:graphics': 434s 434s dotchart 434s 434s > 434s > ## two-phase simple random sampling. 434s > data(pbc, package="survival") 434s > pbc$id<-1:nrow(pbc) 434s > pbc$randomized<-with(pbc, !is.na(trt) & trt>-9) 434s > (d2pbc<-twophase(id=list(~id,~id), data=pbc, subset=~I(!randomized))) 434s Two-phase sparse-matrix design: 434s twophase2(id = id, strata = strata, probs = probs, fpc = fpc, 434s subset = subset, data = data) 434s Phase 1: 434s Independent Sampling design (with replacement) 434s svydesign(ids = ~id) 434s Phase 2: 434s Independent Sampling design 434s svydesign(ids = ~id, fpc = `*phase1*`) 434s > m<-svymean(~bili, d2pbc) 434s > all.equal(as.vector(coef(m)),with(pbc, mean(bili[!randomized]))) 434s [1] TRUE 434s > all.equal(as.vector(SE(m)), 434s + with(pbc, sd(bili[!randomized])/sqrt(sum(!randomized))), 434s + tolerance=0.002) 434s [1] TRUE 434s > 434s > ## two-stage sampling as two-phase 434s > data(mu284) 434s > ii<-with(mu284, c(1:15, rep(1:5,n2[1:5]-3))) 434s > mu284.1<-mu284[ii,] 434s > mu284.1$id<-1:nrow(mu284.1) 434s > mu284.1$sub<-rep(c(TRUE,FALSE),c(15,34-15)) 434s > dmu284<-svydesign(id=~id1+id2,fpc=~n1+n2, data=mu284) 434s > ## first phase cluster sample, second phase stratified within cluster 434s > (d2mu284<-twophase(id=list(~id1,~id),strata=list(NULL,~id1), 434s + fpc=list(~n1,NULL),data=mu284.1,subset=~sub,method="approx")) 434s Two-phase design: twophase(id = list(~id1, ~id), strata = list(NULL, ~id1), fpc = list(~n1, 434s NULL), data = mu284.1, subset = ~sub, method = "approx") 434s Phase 1: 434s 1 - level Cluster Sampling design 434s With (5) clusters. 434s svydesign(ids = ~id1, fpc = ~n1) 434s Phase 2: 434s Stratified Independent Sampling design 434s svydesign(ids = ~id, strata = ~id1, fpc = `*phase1*`) 434s > (d22mu284<-twophase(id=list(~id1,~id),strata=list(NULL,~id1), 434s + fpc=list(~n1,NULL),data=mu284.1,subset=~sub,method="full")) 434s Two-phase sparse-matrix design: 434s twophase2(id = id, strata = strata, probs = probs, fpc = fpc, 434s subset = subset, data = data) 434s Phase 1: 434s 1 - level Cluster Sampling design 434s With (5) clusters. 434s svydesign(ids = ~id1, fpc = ~n1) 434s Phase 2: 434s Stratified Independent Sampling design 434s svydesign(ids = ~id, strata = ~id1, fpc = `*phase1*`) 434s > summary(d2mu284) 434s Two-phase design: twophase(id = list(~id1, ~id), strata = list(NULL, ~id1), fpc = list(~n1, 434s NULL), data = mu284.1, subset = ~sub, method = "approx") 434s Phase 1: 434s 1 - level Cluster Sampling design 434s With (5) clusters. 434s svydesign(ids = ~id1, fpc = ~n1) 434s Probabilities: 434s Min. 1st Qu. Median Mean 3rd Qu. Max. 434s 0.1 0.1 0.1 0.1 0.1 0.1 434s Population size (PSUs): 50 434s Phase 2: 434s Stratified Independent Sampling design 434s svydesign(ids = ~id, strata = ~id1, fpc = `*phase1*`) 434s Probabilities: 434s Min. 1st Qu. Median Mean 3rd Qu. Max. 434s 0.3333 0.3750 0.4286 0.4674 0.6000 0.6000 434s Stratum Sizes: 434s 19 31 45 47 50 434s obs 3 3 3 3 3 434s design.PSU 3 3 3 3 3 434s actual.PSU 3 3 3 3 3 434s Population stratum sizes (PSUs): 434s 19 31 45 47 50 434s 5 7 8 5 9 434s Data variables: 434s [1] "id1" "n1" "id2" "y1" "n2" "id" "sub" 434s > t1<-svytotal(~y1, dmu284) 434s > t2<-svytotal(~y1, d2mu284) 434s > t22<-svytotal(~y1,d22mu284) 434s > m1<-svymean(~y1, dmu284) 434s > m2<-svymean(~y1, d2mu284) 434s > m22<-svymean(~y1, d22mu284) 434s > all.equal(coef(t1),coef(t2)) 434s [1] TRUE 434s > all.equal(coef(t1),coef(t22)) 434s [1] TRUE 434s > all.equal(coef(m1),coef(m2)) 434s [1] TRUE 434s > all.equal(coef(m1),coef(m22)) 434s [1] TRUE 434s > all.equal(as.vector(SE(m1)),as.vector(SE(m2))) 434s [1] TRUE 434s > all.equal(as.vector(SE(m1)),as.vector(SE(m22))) 434s [1] TRUE 434s > all.equal(as.vector(SE(t1)),as.vector(SE(t2))) 434s [1] TRUE 434s > all.equal(as.vector(SE(t1)),as.vector(SE(t22))) 434s [1] TRUE 434s > 434s > ## case-cohort design 434s > ##this example requires R 2.3.1 or later for cch and data. 434s > library("survival") 434s > data(nwtco, package="survival") 434s > ## unstratified, equivalent to Lin & Ying (1993) 434s > print(dcchs<-twophase(id=list(~seqno,~seqno), strata=list(NULL,~rel), 434s + subset=~I(in.subcohort | rel), data=nwtco)) 435s Two-phase sparse-matrix design: 435s twophase2(id = id, strata = strata, probs = probs, fpc = fpc, 435s subset = subset, data = data) 435s Phase 1: 435s Independent Sampling design (with replacement) 435s svydesign(ids = ~seqno) 435s Phase 2: 435s Stratified Independent Sampling design 435s svydesign(ids = ~seqno, strata = ~rel, fpc = `*phase1*`) 435s > cch1<-svycoxph(Surv(edrel,rel)~factor(stage)+factor(histol)+I(age/12), 435s + design=dcchs) 435s > dcchs2<-twophase(id=list(~seqno,~seqno), strata=list(NULL,~rel), 435s + subset=~I(in.subcohort | rel), data=nwtco,method="approx") 435s > cch1.2<-svycoxph(Surv(edrel,rel)~factor(stage)+factor(histol)+I(age/12), 435s + design=dcchs) 435s > all.equal(coef(cch1),coef(cch1.2)) 435s [1] TRUE 435s > all.equal(SE(cch1),SE(cch1.2)) 435s [1] TRUE 435s > ## Using survival::cch 435s > subcoh <- nwtco$in.subcohort 435s > selccoh <- with(nwtco, rel==1|subcoh==1) 435s > ccoh.data <- nwtco[selccoh,] 435s > ccoh.data$subcohort <- subcoh[selccoh] 435s > cch2<-cch(Surv(edrel, rel) ~ factor(stage) + factor(histol) + I(age/12), 435s + data =ccoh.data, subcoh = ~subcohort, id=~seqno, 435s + cohort.size=4028, method="LinYing", robust=TRUE) 435s > 435s > print(all.equal(as.vector(coef(cch1)),as.vector(coef(cch2)))) 435s [1] TRUE 435s > ## cch has smaller variances by a factor of 1.0005 because 435s > ## there is a (n/(n-1)) in the survey phase1 varianace 435s > print(all.equal(as.vector(SE(cch1)), as.vector(SE(cch2)),tolerance=0.0006)) 435s [1] TRUE 435s > 435s > 435s > ## bug report from Takahiro Tsuchiya for version 3.4 435s > ## We used to not match Sarndal exactly, because our old phase-one 435s > ## estimator had a small bias for finite populations 435s > rei<-read.table(tmp<-textConnection( 435s + " id N n.a h n.ah n.h sub y 435s + 1 1 300 20 1 12 5 TRUE 1 435s + 2 2 300 20 1 12 5 TRUE 2 435s + 3 3 300 20 1 12 5 TRUE 3 435s + 4 4 300 20 1 12 5 TRUE 4 435s + 5 5 300 20 1 12 5 TRUE 5 435s + 6 6 300 20 1 12 5 FALSE NA 435s + 7 7 300 20 1 12 5 FALSE NA 435s + 8 8 300 20 1 12 5 FALSE NA 435s + 9 9 300 20 1 12 5 FALSE NA 435s + 10 10 300 20 1 12 5 FALSE NA 435s + 11 11 300 20 1 12 5 FALSE NA 435s + 12 12 300 20 1 12 5 FALSE NA 435s + 13 13 300 20 2 8 3 TRUE 6 435s + 14 14 300 20 2 8 3 TRUE 7 435s + 15 15 300 20 2 8 3 TRUE 8 435s + 16 16 300 20 2 8 3 FALSE NA 435s + 17 17 300 20 2 8 3 FALSE NA 435s + 18 18 300 20 2 8 3 FALSE NA 435s + 19 19 300 20 2 8 3 FALSE NA 435s + 20 20 300 20 2 8 3 FALSE NA 435s + "), header=TRUE) 435s > close(tmp) 435s > 435s > des.rei <- twophase(id=list(~id,~id), strata=list(NULL,~h), 435s + fpc=list(~N,NULL), subset=~sub, data=rei, method="approx") 435s > tot<- svytotal(~y, des.rei) 435s > des.rei2 <- twophase(id=list(~id,~id), strata=list(NULL,~h), 435s + fpc=list(~N,NULL), subset=~sub, data=rei) 435s > tot2<- svytotal(~y, des.rei2) 435s > 435s > ## based on Sarndal et al (9.4.14) 435s > rei$w.ah <- rei$n.ah / rei$n.a 435s > a.rei <- aggregate(rei, by=list(rei$h), mean, na.rm=TRUE) 435s > a.rei$S.ysh <- tapply(rei$y, rei$h, var, na.rm=TRUE) 435s > a.rei$y.u <- sum(a.rei$w.ah * a.rei$y) 435s > V <- with(a.rei, sum(N * (N-1) * ((n.ah-1)/(n.a-1) - (n.h-1)/(N-1)) * w.ah * S.ysh / n.h)) 435s > V <- V + with(a.rei, sum(N * (N-n.a) * w.ah * (y - y.u)^2 / (n.a-1))) 435s > 435s > a.rei$f.h<-with(a.rei, n.h/n.ah) 435s > Vphase2<-with(a.rei, sum(N*N*w.ah^2* ((1-f.h)/n.h) *S.ysh)) 435s > 435s > a.rei$f<-with(a.rei, n.a/N) 435s > a.rei$delta.h<-with(a.rei, (1/n.h)*(n.a-n.ah)/(n.a-1)) 435s > Vphase1<-with(a.rei, sum(N*N*((1-f)/n.a)*( w.ah*(1-delta.h)*S.ysh+ ((n.a)/(n.a-1))*w.ah*(y-y.u)^2))) 435s > 435s > V 435s [1] 36522.63 435s > Vphase1 435s [1] 24072.63 435s > Vphase2 435s [1] 12450 435s > vcov(tot) 435s y 435s y 35911.05 435s attr(,"phases") 435s attr(,"phases")$phase1 435s [,1] 435s [1,] 23461.05 435s 435s attr(,"phases")$phase2 435s y 435s y 12450 435s 435s > vcov(tot2) 435s [,1] 435s [1,] 36522.63 435s attr(,"phases") 435s attr(,"phases")$phase1 435s [,1] 435s [1,] 24072.63 435s 435s attr(,"phases")$phase2 435s [,1] 435s [1,] 12450 435s 435s > ## phase 2 identical 435s > all.equal(Vphase2,drop(attr(vcov(tot),"phases")$phase2)) 435s [1] TRUE 435s > all.equal(Vphase2,drop(attr(vcov(tot2),"phases")$phase2)) 435s [1] TRUE 435s > ## phase 1 differs by 2.6% for old twophase estimator 435s > Vphase1/attr(vcov(tot),"phases")$phase1 435s [,1] 435s [1,] 1.026068 435s > all.equal(Vphase1,as.vector(attr(vcov(tot2),"phases")$phase1)) 435s [1] TRUE 435s > 435s > 435s autopkgtest [02:27:48]: test run-unit-test: -----------------------] 436s run-unit-test PASS 436s autopkgtest [02:27:49]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 437s autopkgtest [02:27:50]: test pkg-r-autopkgtest: preparing testbed 441s Reading package lists... 441s Building dependency tree... 441s Reading state information... 441s Starting pkgProblemResolver with broken count: 0 441s Starting 2 pkgProblemResolver with broken count: 0 441s Done 442s The following additional packages will be installed: 442s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu 442s dctrl-tools g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 442s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 442s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8 442s libatomic1 libblas-dev libbz2-dev libcc1-0 libgcc-13-dev libgfortran-13-dev 442s libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev 442s liblapack-dev liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 442s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev 442s libstdc++-13-dev libubsan1 pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 442s r-base-dev r-cran-hexbin zlib1g-dev 442s Suggested packages: 442s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 442s gcc-13-doc gcc-multilib autoconf automake libtool flex bison gdb gcc-doc 442s gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib gfortran-doc 442s gfortran-13-multilib gfortran-13-doc libcoarrays-dev liblapack-doc icu-doc 442s liblzma-doc ncurses-doc readline-doc libstdc++-13-doc texlive-base 442s texlive-latex-base texlive-plain-generic texlive-fonts-recommended 442s texlive-fonts-extra texlive-extra-utils texlive-latex-recommended 442s texlive-latex-extra texinfo r-bioc-affy r-bioc-biobase r-bioc-limma 442s Recommended packages: 442s bzip2-doc libpng-tools 442s The following NEW packages will be installed: 442s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 442s cpp-s390x-linux-gnu dctrl-tools g++ g++-13 g++-13-s390x-linux-gnu 442s g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu 442s gfortran gfortran-13 gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu 442s icu-devtools libasan8 libatomic1 libblas-dev libbz2-dev libcc1-0 442s libgcc-13-dev libgfortran-13-dev libicu-dev libisl23 libitm1 libjpeg-dev 442s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3 442s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 442s libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev libubsan1 pkg-config 442s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev r-cran-hexbin zlib1g-dev 442s 0 upgraded, 53 newly installed, 0 to remove and 1 not upgraded. 442s Need to get 84.1 MB/84.1 MB of archives. 442s After this operation, 284 MB of additional disk space will be used. 442s Get:1 /tmp/autopkgtest.1ZO1nF/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [768 B] 442s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 442s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 442s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [9935 kB] 443s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-21ubuntu1 [1026 B] 443s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 443s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 443s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240315-1ubuntu1 [50.0 kB] 443s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240315-1ubuntu1 [31.1 kB] 443s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240315-1ubuntu1 [9396 B] 443s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240315-1ubuntu1 [2997 kB] 443s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240315-1ubuntu1 [1186 kB] 443s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-21ubuntu1 [1003 kB] 444s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [19.1 MB] 445s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-21ubuntu1 [469 kB] 445s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 445s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 445s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-21ubuntu1 [2494 kB] 445s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [11.3 MB] 446s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-21ubuntu1 [14.4 kB] 446s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 446s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 446s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 446s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 446s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-21ubuntu1 [623 kB] 446s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [10.4 MB] 447s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-21ubuntu1 [10.9 kB] 447s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 447s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 447s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 447s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 447s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 447s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 447s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 447s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 447s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 448s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 448s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 448s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 448s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 448s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 448s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 448s Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 448s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g-dev s390x 1:1.3.dfsg-3.1ubuntu1 [904 kB] 448s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng-dev s390x 1.6.43-3 [277 kB] 448s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline-dev s390x 8.2-4 [189 kB] 448s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 448s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 448s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 448s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma-dev s390x 5.6.0-0.2 [185 kB] 448s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-base-dev all 4.3.3-2build1 [4334 B] 448s Get:52 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 448s Get:53 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hexbin s390x 1.28.3-1 [1576 kB] 449s Fetched 84.1 MB in 7s (12.6 MB/s) 449s Selecting previously unselected package libisl23:s390x. 449s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 102697 files and directories currently installed.) 449s Preparing to unpack .../00-libisl23_0.26-3_s390x.deb ... 449s Unpacking libisl23:s390x (0.26-3) ... 449s Selecting previously unselected package libmpc3:s390x. 449s Preparing to unpack .../01-libmpc3_1.3.1-1_s390x.deb ... 449s Unpacking libmpc3:s390x (1.3.1-1) ... 449s Selecting previously unselected package cpp-13-s390x-linux-gnu. 449s Preparing to unpack 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g++-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 450s Selecting previously unselected package g++-13. 450s Preparing to unpack .../18-g++-13_13.2.0-21ubuntu1_s390x.deb ... 450s Unpacking g++-13 (13.2.0-21ubuntu1) ... 450s Selecting previously unselected package g++-s390x-linux-gnu. 450s Preparing to unpack .../19-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 450s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 450s Selecting previously unselected package g++. 450s Preparing to unpack .../20-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 450s Unpacking g++ (4:13.2.0-7ubuntu1) ... 450s Selecting previously unselected package build-essential. 450s Preparing to unpack .../21-build-essential_12.10ubuntu1_s390x.deb ... 450s Unpacking build-essential (12.10ubuntu1) ... 450s Selecting previously unselected package dctrl-tools. 450s Preparing to unpack .../22-dctrl-tools_2.24-3build2_s390x.deb ... 450s Unpacking dctrl-tools (2.24-3build2) ... 450s Selecting previously unselected package libgfortran-13-dev:s390x. 450s Preparing to unpack .../23-libgfortran-13-dev_13.2.0-21ubuntu1_s390x.deb ... 450s Unpacking libgfortran-13-dev:s390x (13.2.0-21ubuntu1) ... 450s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 450s Preparing to unpack .../24-gfortran-13-s390x-linux-gnu_13.2.0-21ubuntu1_s390x.deb ... 450s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 451s Selecting previously unselected package gfortran-13. 451s Preparing to unpack .../25-gfortran-13_13.2.0-21ubuntu1_s390x.deb ... 451s Unpacking gfortran-13 (13.2.0-21ubuntu1) ... 451s Selecting previously unselected package gfortran-s390x-linux-gnu. 451s Preparing to unpack .../26-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 451s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 451s Selecting previously unselected package gfortran. 451s Preparing to unpack .../27-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 451s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 451s Selecting previously unselected package icu-devtools. 451s Preparing to unpack .../28-icu-devtools_74.2-1ubuntu1_s390x.deb ... 451s Unpacking icu-devtools (74.2-1ubuntu1) ... 451s Selecting previously unselected package libblas-dev:s390x. 451s Preparing to unpack .../29-libblas-dev_3.12.0-3_s390x.deb ... 451s Unpacking libblas-dev:s390x (3.12.0-3) ... 451s Selecting previously unselected package libbz2-dev:s390x. 451s Preparing to unpack .../30-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 451s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 451s Selecting previously unselected package libicu-dev:s390x. 451s Preparing to unpack .../31-libicu-dev_74.2-1ubuntu1_s390x.deb ... 451s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 451s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 451s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 451s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 451s Selecting previously unselected package libjpeg8-dev:s390x. 451s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 451s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 451s Selecting previously unselected package libjpeg-dev:s390x. 451s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 451s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 451s Selecting previously unselected package liblapack-dev:s390x. 451s Preparing to unpack .../35-liblapack-dev_3.12.0-3_s390x.deb ... 451s Unpacking liblapack-dev:s390x (3.12.0-3) ... 451s Selecting previously unselected package libncurses-dev:s390x. 451s Preparing to unpack .../36-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 451s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 451s Selecting previously unselected package libpcre2-16-0:s390x. 451s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 451s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 451s Selecting previously unselected package libpcre2-32-0:s390x. 451s 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.../43-libpng-dev_1.6.43-3_s390x.deb ... 452s Unpacking libpng-dev:s390x (1.6.43-3) ... 452s Selecting previously unselected package libreadline-dev:s390x. 452s Preparing to unpack .../44-libreadline-dev_8.2-4_s390x.deb ... 452s Unpacking libreadline-dev:s390x (8.2-4) ... 452s Selecting previously unselected package pkgconf-bin. 452s Preparing to unpack .../45-pkgconf-bin_1.8.1-2_s390x.deb ... 452s Unpacking pkgconf-bin (1.8.1-2) ... 452s Selecting previously unselected package pkgconf:s390x. 452s Preparing to unpack .../46-pkgconf_1.8.1-2_s390x.deb ... 452s Unpacking pkgconf:s390x (1.8.1-2) ... 452s Selecting previously unselected package pkg-config:s390x. 452s Preparing to unpack .../47-pkg-config_1.8.1-2_s390x.deb ... 452s Unpacking pkg-config:s390x (1.8.1-2) ... 452s Selecting previously unselected package liblzma-dev:s390x. 452s Preparing to unpack .../48-liblzma-dev_5.6.0-0.2_s390x.deb ... 452s Unpacking liblzma-dev:s390x (5.6.0-0.2) ... 452s Selecting previously unselected package r-base-dev. 452s Preparing to unpack .../49-r-base-dev_4.3.3-2build1_all.deb ... 452s Unpacking r-base-dev (4.3.3-2build1) ... 452s Selecting previously unselected package pkg-r-autopkgtest. 452s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 452s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 452s Selecting previously unselected package r-cran-hexbin. 452s Preparing to unpack .../51-r-cran-hexbin_1.28.3-1_s390x.deb ... 452s Unpacking r-cran-hexbin (1.28.3-1) ... 452s Selecting previously unselected package autopkgtest-satdep. 452s Preparing to unpack .../52-2-autopkgtest-satdep.deb ... 452s Unpacking autopkgtest-satdep (0) ... 452s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 452s Setting up libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 452s Setting up libreadline-dev:s390x (8.2-4) ... 452s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ... 452s Setting up libpcre2-32-0:s390x (10.42-4ubuntu1) ... 452s Setting up libpkgconf3:s390x (1.8.1-2) ... 452s Setting up libmpc3:s390x (1.3.1-1) ... 452s Setting up libatomic1:s390x (14-20240315-1ubuntu1) ... 452s Setting up icu-devtools (74.2-1ubuntu1) ... 452s Setting up pkgconf-bin (1.8.1-2) ... 452s Setting up r-cran-hexbin (1.28.3-1) ... 452s Setting up liblzma-dev:s390x (5.6.0-0.2) ... 452s Setting up libubsan1:s390x (14-20240315-1ubuntu1) ... 452s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu1) ... 452s Setting up libpcre2-posix3:s390x (10.42-4ubuntu1) ... 452s Setting up libasan8:s390x (14-20240315-1ubuntu1) ... 452s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 452s Setting up libisl23:s390x (0.26-3) ... 452s Setting up libicu-dev:s390x (74.2-1ubuntu1) ... 452s Setting up libcc1-0:s390x (14-20240315-1ubuntu1) ... 452s Setting up libblas-dev:s390x (3.12.0-3) ... 452s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 452s Setting up dctrl-tools (2.24-3build2) ... 452s Setting up libitm1:s390x (14-20240315-1ubuntu1) ... 452s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ... 452s Setting up libpcre2-dev:s390x (10.42-4ubuntu1) ... 452s Setting up libpng-dev:s390x (1.6.43-3) ... 452s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 452s Setting up pkgconf:s390x (1.8.1-2) ... 452s Setting up cpp-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 452s Setting up liblapack-dev:s390x (3.12.0-3) ... 452s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 452s Setting up pkg-config:s390x (1.8.1-2) ... 452s Setting up libgcc-13-dev:s390x (13.2.0-21ubuntu1) ... 452s Setting up libgfortran-13-dev:s390x (13.2.0-21ubuntu1) ... 452s Setting up libstdc++-13-dev:s390x (13.2.0-21ubuntu1) ... 452s Setting up cpp-13 (13.2.0-21ubuntu1) ... 452s Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 452s Setting up gcc-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 452s Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 452s Setting up g++-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 452s Setting up gcc-13 (13.2.0-21ubuntu1) ... 452s Setting up cpp (4:13.2.0-7ubuntu1) ... 452s Setting up gfortran-13-s390x-linux-gnu (13.2.0-21ubuntu1) ... 452s Setting up g++-13 (13.2.0-21ubuntu1) ... 452s Setting up gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 452s Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 452s Setting up gcc (4:13.2.0-7ubuntu1) ... 452s Setting up gfortran-13 (13.2.0-21ubuntu1) ... 452s Setting up g++ (4:13.2.0-7ubuntu1) ... 452s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 452s Setting up build-essential (12.10ubuntu1) ... 452s Setting up gfortran (4:13.2.0-7ubuntu1) ... 452s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 452s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 452s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 452s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 452s Setting up r-base-dev (4.3.3-2build1) ... 452s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 452s Setting up autopkgtest-satdep (0) ... 452s Processing triggers for man-db (2.12.0-3build4) ... 453s Processing triggers for install-info (7.1-3build1) ... 453s Processing triggers for libc-bin (2.39-0ubuntu6) ... 455s (Reading database ... 104579 files and directories currently installed.) 455s Removing autopkgtest-satdep (0) ... 456s autopkgtest [02:28:09]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 456s autopkgtest [02:28:09]: test pkg-r-autopkgtest: [----------------------- 456s Test: Try to load the R library survey 456s 456s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 456s Copyright (C) 2024 The R Foundation for Statistical Computing 456s Platform: s390x-ibm-linux-gnu (64-bit) 456s 456s R is free software and comes with ABSOLUTELY NO WARRANTY. 456s You are welcome to redistribute it under certain conditions. 456s Type 'license()' or 'licence()' for distribution details. 456s 456s R is a collaborative project with many contributors. 456s Type 'contributors()' for more information and 456s 'citation()' on how to cite R or R packages in publications. 456s 456s Type 'demo()' for some demos, 'help()' for on-line help, or 456s 'help.start()' for an HTML browser interface to help. 456s Type 'q()' to quit R. 456s 456s > library('survey') 456s Loading required package: grid 456s Loading required package: Matrix 457s Loading required package: survival 458s 458s Attaching package: ‘survey’ 458s 458s The following object is masked from ‘package:graphics’: 458s 458s dotchart 458s 458s > 458s > 458s Other tests are currently unsupported! 458s They will be progressively added. 458s autopkgtest [02:28:11]: test pkg-r-autopkgtest: -----------------------] 458s autopkgtest [02:28:11]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 458s pkg-r-autopkgtest PASS 459s autopkgtest [02:28:12]: @@@@@@@@@@@@@@@@@@@@ summary 459s run-unit-test PASS 459s pkg-r-autopkgtest PASS 478s Creating nova instance adt-noble-s390x-r-cran-survey-20240328-022032-juju-7f2275-prod-proposed-migration-environment-2-844dc728-20ee-4424-bf4a-d60c5cbc27fc from image adt/ubuntu-noble-s390x-server-20240327.img (UUID 4dc0c4c2-a3ae-40cd-8411-e7fc228c10ae)...