0s autopkgtest [01:08:35]: starting date and time: 2024-03-28 01:08:35+0000
  0s autopkgtest [01:08:35]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [01:08:35]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.thz9zs_f/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade r-cran-parallelly --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.3.3-2build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-5.secgroup --name adt-noble-s390x-r-cran-parallelly-20240328-010835-juju-7f2275-prod-proposed-migration-environment-3-d64a032a-ec3d-4484-b2eb-356b121f6a6e --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
137s autopkgtest [01:10:52]: testbed dpkg architecture: s390x
137s autopkgtest [01:10:52]: testbed apt version: 2.7.12
137s autopkgtest [01:10:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup
138s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
138s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [475 kB]
138s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [55.9 kB]
138s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B]
138s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3961 kB]
138s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [652 kB]
138s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B]
138s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B]
138s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B]
138s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4015 kB]
139s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B]
139s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.2 kB]
139s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B]
141s Fetched 9343 kB in 2s (3963 kB/s)
141s Reading package lists...
143s Reading package lists...
143s Building dependency tree...
143s Reading state information...
143s Calculating upgrade...
143s The following packages will be upgraded:
143s   binutils binutils-common binutils-s390x-linux-gnu dmsetup gcc-13-base
143s   gcc-14-base initramfs-tools initramfs-tools-bin initramfs-tools-core jq
143s   libbinutils libctf-nobfd0 libctf0 libdevmapper1.02.1 libexpat1 libftdi1-2
143s   libgcc-s1 libjq1 libseccomp2 libsframe1 libstdc++6 libusb-1.0-0
143s 22 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
143s Need to get 4987 kB of archives.
143s After this operation, 1024 B of additional disk space will be used.
143s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x gcc-14-base s390x 14-20240315-1ubuntu1 [47.0 kB]
144s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++6 s390x 14-20240315-1ubuntu1 [908 kB]
144s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-s1 s390x 14-20240315-1ubuntu1 [35.9 kB]
144s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libseccomp2 s390x 2.5.5-1ubuntu2 [53.4 kB]
144s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libdevmapper1.02.1 s390x 2:1.02.185-3ubuntu2 [142 kB]
144s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x dmsetup s390x 2:1.02.185-3ubuntu2 [80.4 kB]
144s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libexpat1 s390x 2.6.1-2 [94.8 kB]
144s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libusb-1.0-0 s390x 2:1.0.27-1 [54.8 kB]
144s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libctf0 s390x 2.42-4ubuntu1 [98.4 kB]
144s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libctf-nobfd0 s390x 2.42-4ubuntu1 [100 kB]
144s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x binutils-s390x-linux-gnu s390x 2.42-4ubuntu1 [2270 kB]
144s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libbinutils s390x 2.42-4ubuntu1 [477 kB]
144s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x binutils s390x 2.42-4ubuntu1 [3056 B]
144s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x binutils-common s390x 2.42-4ubuntu1 [217 kB]
144s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x libsframe1 s390x 2.42-4ubuntu1 [14.2 kB]
144s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-base s390x 13.2.0-21ubuntu1 [48.3 kB]
144s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools all 0.142ubuntu23 [9058 B]
144s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools-core all 0.142ubuntu23 [50.1 kB]
144s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x initramfs-tools-bin s390x 0.142ubuntu23 [20.5 kB]
144s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x jq s390x 1.7.1-3 [66.5 kB]
145s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libjq1 s390x 1.7.1-3 [168 kB]
145s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libftdi1-2 s390x 1.5-6build4 [29.3 kB]
145s Fetched 4987 kB in 1s (3520 kB/s)
145s (Reading database ... 
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(Reading database ... 52167 files and directories currently installed.)
145s Preparing to unpack .../gcc-14-base_14-20240315-1ubuntu1_s390x.deb ...
145s Unpacking gcc-14-base:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ...
145s Setting up gcc-14-base:s390x (14-20240315-1ubuntu1) ...
145s (Reading database ... 
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(Reading database ... 52167 files and directories currently installed.)
145s Preparing to unpack .../libstdc++6_14-20240315-1ubuntu1_s390x.deb ...
145s Unpacking libstdc++6:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ...
145s Setting up libstdc++6:s390x (14-20240315-1ubuntu1) ...
145s (Reading database ... 
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(Reading database ... 52167 files and directories currently installed.)
145s Preparing to unpack .../libgcc-s1_14-20240315-1ubuntu1_s390x.deb ...
145s Unpacking libgcc-s1:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ...
145s Setting up libgcc-s1:s390x (14-20240315-1ubuntu1) ...
145s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52167 files and directories currently installed.)
145s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu2_s390x.deb ...
145s Unpacking libseccomp2:s390x (2.5.5-1ubuntu2) over (2.5.5-1ubuntu1) ...
145s Setting up libseccomp2:s390x (2.5.5-1ubuntu2) ...
145s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52167 files and directories currently installed.)
145s Preparing to unpack .../00-libdevmapper1.02.1_2%3a1.02.185-3ubuntu2_s390x.deb ...
145s Unpacking libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ...
145s Preparing to unpack .../01-dmsetup_2%3a1.02.185-3ubuntu2_s390x.deb ...
145s Unpacking dmsetup (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ...
145s Preparing to unpack .../02-libexpat1_2.6.1-2_s390x.deb ...
145s Unpacking libexpat1:s390x (2.6.1-2) over (2.6.0-1) ...
145s Preparing to unpack .../03-libusb-1.0-0_2%3a1.0.27-1_s390x.deb ...
145s Unpacking libusb-1.0-0:s390x (2:1.0.27-1) over (2:1.0.26-1) ...
145s Preparing to unpack .../04-libctf0_2.42-4ubuntu1_s390x.deb ...
145s Unpacking libctf0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../05-libctf-nobfd0_2.42-4ubuntu1_s390x.deb ...
145s Unpacking libctf-nobfd0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../06-binutils-s390x-linux-gnu_2.42-4ubuntu1_s390x.deb ...
145s Unpacking binutils-s390x-linux-gnu (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../07-libbinutils_2.42-4ubuntu1_s390x.deb ...
145s Unpacking libbinutils:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../08-binutils_2.42-4ubuntu1_s390x.deb ...
145s Unpacking binutils (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../09-binutils-common_2.42-4ubuntu1_s390x.deb ...
145s Unpacking binutils-common:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../10-libsframe1_2.42-4ubuntu1_s390x.deb ...
145s Unpacking libsframe1:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ...
145s Preparing to unpack .../11-gcc-13-base_13.2.0-21ubuntu1_s390x.deb ...
145s Unpacking gcc-13-base:s390x (13.2.0-21ubuntu1) over (13.2.0-17ubuntu2) ...
145s Preparing to unpack .../12-initramfs-tools_0.142ubuntu23_all.deb ...
146s Unpacking initramfs-tools (0.142ubuntu23) over (0.142ubuntu20) ...
146s Preparing to unpack .../13-initramfs-tools-core_0.142ubuntu23_all.deb ...
146s Unpacking initramfs-tools-core (0.142ubuntu23) over (0.142ubuntu20) ...
146s Preparing to unpack .../14-initramfs-tools-bin_0.142ubuntu23_s390x.deb ...
146s Unpacking initramfs-tools-bin (0.142ubuntu23) over (0.142ubuntu20) ...
146s Preparing to unpack .../15-jq_1.7.1-3_s390x.deb ...
146s Unpacking jq (1.7.1-3) over (1.7.1-2) ...
146s Preparing to unpack .../16-libjq1_1.7.1-3_s390x.deb ...
146s Unpacking libjq1:s390x (1.7.1-3) over (1.7.1-2) ...
146s Preparing to unpack .../17-libftdi1-2_1.5-6build4_s390x.deb ...
146s Unpacking libftdi1-2:s390x (1.5-6build4) over (1.5-6build3) ...
146s Setting up libexpat1:s390x (2.6.1-2) ...
146s Setting up libjq1:s390x (1.7.1-3) ...
146s Setting up binutils-common:s390x (2.42-4ubuntu1) ...
146s Setting up libctf-nobfd0:s390x (2.42-4ubuntu1) ...
146s Setting up libsframe1:s390x (2.42-4ubuntu1) ...
146s Setting up gcc-13-base:s390x (13.2.0-21ubuntu1) ...
146s Setting up libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) ...
146s Setting up dmsetup (2:1.02.185-3ubuntu2) ...
146s Setting up jq (1.7.1-3) ...
146s Setting up libusb-1.0-0:s390x (2:1.0.27-1) ...
146s Setting up libbinutils:s390x (2.42-4ubuntu1) ...
146s Setting up initramfs-tools-bin (0.142ubuntu23) ...
146s Setting up libctf0:s390x (2.42-4ubuntu1) ...
146s Setting up binutils-s390x-linux-gnu (2.42-4ubuntu1) ...
146s Setting up binutils (2.42-4ubuntu1) ...
146s Setting up libftdi1-2:s390x (1.5-6build4) ...
146s Setting up initramfs-tools-core (0.142ubuntu23) ...
146s Setting up initramfs-tools (0.142ubuntu23) ...
146s update-initramfs: deferring update (trigger activated)
146s Processing triggers for man-db (2.12.0-3) ...
146s Processing triggers for libc-bin (2.39-0ubuntu6) ...
146s Processing triggers for initramfs-tools (0.142ubuntu23) ...
146s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic
146s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
150s Using config file '/etc/zipl.conf'
150s Building bootmap in '/boot'
150s Adding IPL section 'ubuntu' (default)
150s Preparing boot device for LD-IPL: vda (0000).
150s Done.
150s Reading package lists...
150s Building dependency tree...
150s Reading state information...
150s 0 upgraded, 0 newly installed, 0 to remove and 222 not upgraded.
151s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease
151s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease
151s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease
151s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease
152s Reading package lists...
152s Reading package lists...
153s Building dependency tree...
153s Reading state information...
153s Calculating upgrade...
153s The following packages were automatically installed and are no longer required:
153s   libaio1 libnetplan0 python3-distutils python3-lib2to3
153s Use 'sudo apt autoremove' to remove them.
153s The following packages will be REMOVED:
153s   libapt-pkg6.0 libarchive13 libatm1 libcurl3-gnutls libcurl4 libdb5.3 libelf1
153s   libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libgpgme11
153s   libhogweed6 libmagic1 libnettle8 libnpth0 libnvme1 libparted2 libperl5.38
153s   libpng16-16 libpsl5 libreadline8 libreiserfscore0 libssl3 libtirpc3 liburcu8
153s   libuv1
153s The following NEW packages will be installed:
153s   bpfcc-tools bpftrace fontconfig-config fonts-dejavu-core fonts-dejavu-mono
153s   hwdata ieee-data libaio1t64 libapt-pkg6.0t64 libarchive13t64 libatm1t64
153s   libbpfcc libc-dev-bin libc-devtools libc6-dev libclang-cpp18 libclang1-18
153s   libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0
153s   libdw1t64 libelf1t64 libext2fs2t64 libfontconfig1 libfreetype6 libgd3
153s   libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgpgme11t64
153s   libhogweed6t64 libjbig0 libjpeg-turbo8 libjpeg8 libllvm18 libmagic1t64
153s   libnetplan1 libnettle8t64 libnpth0t64 libnvme1t64 libparted2t64
153s   libperl5.38t64 libpng16-16t64 libpsl5t64 libreadline8t64 libreiserfscore0t64
153s   libsharpyuv0 libssl3t64 libtiff6 libtirpc3t64 liburcu8t64 libuv1t64 libwebp7
153s   libxpm4 linux-headers-6.8.0-20 linux-headers-6.8.0-20-generic
153s   linux-image-6.8.0-20-generic linux-libc-dev linux-modules-6.8.0-20-generic
153s   linux-modules-extra-6.8.0-20-generic linux-tools-6.8.0-20
153s   linux-tools-6.8.0-20-generic linux-tools-common manpages manpages-dev
153s   python3-bpfcc python3-netaddr rpcsvc-proto ubuntu-kernel-accessories
153s   xdg-user-dirs
153s The following packages have been kept back:
153s   s390-tools
153s The following packages will be upgraded:
153s   apparmor apt apt-utils base-files bash bind9-dnsutils bind9-host bind9-libs
153s   bolt bsdextrautils bsdutils btrfs-progs coreutils cryptsetup-bin curl dbus
153s   dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common
153s   dbus-user-session dhcpcd-base dirmngr dpkg dpkg-dev e2fsprogs e2fsprogs-l10n
153s   eject fdisk file ftp fwupd gawk gir1.2-girepository-2.0 gir1.2-glib-2.0
153s   gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm gpgv
153s   groff-base ibverbs-providers inetutils-telnet info install-info iproute2
153s   keyboxd kmod kpartx krb5-locales libapparmor1 libaudit-common libaudit1
153s   libblkid1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3
153s   libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3
153s   libblockdev-utils3 libblockdev3 libbpf1 libbrotli1 libcap-ng0 libcom-err2
153s   libcryptsetup12 libdbus-1-3 libdebconfclient0 libdpkg-perl
153s   libevent-core-2.1-7 libfdisk1 libfido2-1 libfwupd2 libgirepository-1.0-1
153s   libglib2.0-data libgssapi-krb5-2 libgudev-1.0-0 libgusb2 libibverbs1
153s   libjcat1 libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 libkmod2
153s   libkrb5-3 libkrb5support0 libldap-common libldap2 liblocale-gettext-perl
153s   liblzma5 libmagic-mgc libmbim-glib4 libmbim-proxy libmm-glib0 libmount1
153s   libnghttp2-14 libnsl2 libnss-systemd libpam-modules libpam-modules-bin
153s   libpam-runtime libpam-systemd libpam0g libplymouth5 libpolkit-agent-1-0
153s   libpolkit-gobject-1-0 libproc2-0 libprotobuf-c1 libpython3-stdlib
153s   libpython3.11-minimal libpython3.11-stdlib libpython3.12-minimal
153s   libpython3.12-stdlib libqmi-glib5 libqmi-proxy libqrtr-glib0 librtmp1
153s   libsasl2-2 libsasl2-modules libsasl2-modules-db libselinux1
153s   libsemanage-common libsemanage2 libslang2 libsmartcols1 libsqlite3-0 libss2
153s   libssh-4 libsystemd-shared libsystemd0 libtext-charwidth-perl
153s   libtext-iconv-perl libtirpc-common libudev1 libudisks2-0 libuuid1
153s   libvolume-key1 libxml2 libxmlb2 libxmuu1 linux-generic linux-headers-generic
153s   linux-headers-virtual linux-image-generic linux-image-virtual linux-virtual
153s   logsave lshw lsof man-db motd-news-config mount mtr-tiny multipath-tools
153s   netplan-generator netplan.io openssh-client openssh-server
153s   openssh-sftp-server openssl parted perl perl-base perl-modules-5.38
153s   pinentry-curses plymouth plymouth-theme-ubuntu-text procps python-apt-common
153s   python3 python3-apt python3-cryptography python3-dbus python3-distutils
153s   python3-gdbm python3-gi python3-lib2to3 python3-minimal python3-netplan
153s   python3-pkg-resources python3-pyrsistent python3-setuptools
153s   python3-typing-extensions python3-yaml python3.11 python3.11-minimal
153s   python3.12 python3.12-minimal readline-common rsync rsyslog s390-tools-data
153s   shared-mime-info sudo systemd systemd-dev systemd-resolved systemd-sysv
153s   systemd-timesyncd tcpdump telnet tnftp ubuntu-pro-client
153s   ubuntu-pro-client-l10n udev udisks2 usb.ids util-linux uuid-runtime
153s   vim-common vim-tiny wget xxd xz-utils zlib1g
153s 221 upgraded, 73 newly installed, 28 to remove and 1 not upgraded.
153s Need to get 223 MB of archives.
153s After this operation, 524 MB of additional disk space will be used.
153s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x motd-news-config all 13ubuntu8 [5098 B]
153s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x base-files s390x 13ubuntu8 [74.2 kB]
153s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bash s390x 5.2.21-2ubuntu3 [845 kB]
154s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdutils s390x 1:2.39.3-9ubuntu2 [96.1 kB]
154s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbrotli1 s390x 1.1.0-2build1 [375 kB]
154s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgssapi-krb5-2 s390x 1.20.1-6ubuntu1 [149 kB]
154s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5-3 s390x 1.20.1-6ubuntu1 [360 kB]
154s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5support0 s390x 1.20.1-6ubuntu1 [34.6 kB]
154s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libk5crypto3 s390x 1.20.1-6ubuntu1 [90.3 kB]
154s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcom-err2 s390x 1.47.0-2.4~exp1ubuntu2 [22.9 kB]
154s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3.1ubuntu1 [75.7 kB]
154s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build6 [58.4 kB]
154s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udisks2 s390x 2.10.1-6 [298 kB]
154s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudisks2-0 s390x 2.10.1-6 [179 kB]
154s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblkid1 s390x 2.39.3-9ubuntu2 [128 kB]
154s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma5 s390x 5.6.0-0.2 [137 kB]
154s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kmod s390x 31+20240202-2ubuntu4 [107 kB]
154s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkmod2 s390x 31+20240202-2ubuntu4 [56.3 kB]
154s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255.4-1ubuntu5 [103 kB]
154s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-timesyncd s390x 255.4-1ubuntu5 [35.3 kB]
154s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-session-bus-common all 1.14.10-4ubuntu2 [80.3 kB]
154s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit-common all 1:3.1.2-2.1 [5674 B]
154s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcap-ng0 s390x 0.8.4-2build1 [15.7 kB]
154s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit1 s390x 1:3.1.2-2.1 [48.9 kB]
154s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam0g s390x 1.5.3-5ubuntu3 [69.8 kB]
154s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libselinux1 s390x 3.5-2ubuntu1 [84.7 kB]
154s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu8 [363 kB]
154s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu8 [227 kB]
154s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB]
154s Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main s390x wget s390x 1.21.4-1ubuntu2 [351 kB]
154s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tnftp s390x 20230507-2build1 [107 kB]
154s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tcpdump s390x 4.99.4-3ubuntu2 [490 kB]
154s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd-shared s390x 255.4-1ubuntu5 [2131 kB]
155s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-resolved s390x 255.4-1ubuntu5 [304 kB]
155s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x sudo s390x 1.9.15p5-3ubuntu3 [968 kB]
155s Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsync s390x 3.2.7-1build1 [446 kB]
155s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-cryptography s390x 41.0.7-4build2 [918 kB]
155s Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB]
155s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-sftp-server s390x 1:9.6p1-3ubuntu11 [39.0 kB]
155s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-client s390x 1:9.6p1-3ubuntu11 [935 kB]
155s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-server s390x 1:9.6p1-3ubuntu11 [529 kB]
155s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssh-4 s390x 0.10.6-2build1 [189 kB]
155s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules s390x 2.1.28+dfsg1-5ubuntu1 [76.6 kB]
155s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build3 [645 kB]
155s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build3 [2419 kB]
156s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build3 [829 kB]
156s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libparted2t64 s390x 3.6-3.1build2 [172 kB]
156s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main s390x parted s390x 3.6-3.1build2 [44.6 kB]
156s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11 s390x 3.11.8-1build4 [589 kB]
156s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11-minimal s390x 3.11.8-1build4 [2280 kB]
156s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-minimal s390x 3.11.8-1build4 [838 kB]
156s Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-stdlib s390x 3.11.8-1build4 [1944 kB]
156s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main s390x shared-mime-info s390x 2.4-1build1 [474 kB]
156s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-girepository-2.0 s390x 1.79.1-1ubuntu6 [24.5 kB]
156s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-glib-2.0 s390x 2.79.3-3ubuntu5 [180 kB]
156s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgirepository-1.0-1 s390x 1.79.1-1ubuntu6 [84.0 kB]
156s Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gi s390x 3.47.0-3build1 [236 kB]
156s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-dbus s390x 1.3.2-5build2 [100 kB]
156s Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnetplan1 s390x 1.0-1 [123 kB]
156s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-netplan s390x 1.0-1 [23.0 kB]
156s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan-generator s390x 1.0-1 [59.1 kB]
156s Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan.io s390x 1.0-1 [65.4 kB]
156s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmlb2 s390x 0.3.15-1build1 [70.6 kB]
156s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgpgme11t64 s390x 1.18.0-4.1ubuntu3 [150 kB]
156s Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libvolume-key1 s390x 0.3.12-7build1 [40.8 kB]
156s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqrtr-glib0 s390x 1.2.2-1ubuntu3 [17.5 kB]
156s Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-glib5 s390x 1.35.2-0ubuntu1 [918 kB]
156s Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-proxy s390x 1.35.2-0ubuntu1 [6122 B]
156s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-agent-1-0 s390x 124-1ubuntu1 [17.8 kB]
156s Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-gobject-1-0 s390x 124-1ubuntu1 [48.3 kB]
156s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmm-glib0 s390x 1.23.4-0ubuntu1 [251 kB]
156s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-glib4 s390x 1.31.2-0ubuntu2 [238 kB]
156s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-proxy s390x 1.31.2-0ubuntu2 [6154 B]
156s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-common all 1.8.0-2build1 [4210 B]
156s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-0 s390x 1.8.0-2build1 [68.4 kB]
156s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgusb2 s390x 0.4.8-1build1 [39.0 kB]
156s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgudev-1.0-0 s390x 1:238-3ubuntu2 [15.7 kB]
156s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libarchive13t64 s390x 3.7.2-1.1ubuntu2 [419 kB]
156s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fwupd s390x 1.9.15-2 [4435 kB]
157s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu8 [356 kB]
157s Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfwupd2 s390x 1.9.15-2 [136 kB]
157s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev3 s390x 3.1.0-1build1 [52.3 kB]
157s Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-utils3 s390x 3.1.0-1build1 [19.2 kB]
157s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-swap3 s390x 3.1.0-1build1 [7778 B]
157s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-part3 s390x 3.1.0-1build1 [15.4 kB]
157s Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnvme1t64 s390x 1.8-3 [78.7 kB]
157s Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-nvme3 s390x 3.1.0-1build1 [18.3 kB]
157s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-mdraid3 s390x 3.1.0-1build1 [13.2 kB]
157s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-loop3 s390x 3.1.0-1build1 [7138 B]
157s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x logsave s390x 1.47.0-2.4~exp1ubuntu2 [22.5 kB]
157s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs-l10n all 1.47.0-2.4~exp1ubuntu2 [5996 B]
157s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libext2fs2t64 s390x 1.47.0-2.4~exp1ubuntu2 [235 kB]
157s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs s390x 1.47.0-2.4~exp1ubuntu2 [615 kB]
157s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libreiserfscore0t64 s390x 1:3.6.27-7.1 [85.5 kB]
157s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main s390x btrfs-progs s390x 6.6.3-1.1build1 [959 kB]
157s Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-fs3 s390x 3.1.0-1build1 [36.5 kB]
157s Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-crypto3 s390x 3.1.0-1build1 [21.6 kB]
157s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bolt s390x 0.9.6-2build1 [142 kB]
157s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-0t64 s390x 2.79.3-3ubuntu5 [1566 kB]
157s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjcat1 s390x 0.2.0-2build2 [34.4 kB]
157s Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu6 [202 kB]
157s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client-l10n s390x 31.2.2 [19.4 kB]
157s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client s390x 31.2.2 [214 kB]
157s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-utils s390x 2.4.4-2ubuntu15 [116 kB]
157s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main s390x keyboxd s390x 2.4.4-2ubuntu15 [83.1 kB]
157s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libnpth0t64 s390x 1.6-3.1 [8148 B]
157s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgv s390x 2.4.4-2ubuntu15 [165 kB]
157s Get:108 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-wks-client s390x 2.4.4-2ubuntu15 [76.8 kB]
157s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-agent s390x 2.4.4-2ubuntu15 [240 kB]
157s Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg s390x 2.4.4-2ubuntu15 [589 kB]
157s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dirmngr s390x 2.4.4-2ubuntu15 [340 kB]
157s Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg all 2.4.4-2ubuntu15 [359 kB]
158s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-apt s390x 2.7.7 [171 kB]
158s Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt-utils s390x 2.7.14 [214 kB]
158s Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapt-pkg6.0t64 s390x 2.7.14 [1014 kB]
158s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB]
158s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB]
158s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB]
158s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt s390x 2.7.14 [1390 kB]
158s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgconf s390x 2.4.4-2ubuntu15 [111 kB]
158s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgsm s390x 2.4.4-2ubuntu15 [244 kB]
158s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-4 [170 kB]
158s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gawk s390x 1:5.2.1-2build2 [496 kB]
158s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fdisk s390x 2.39.3-9ubuntu2 [124 kB]
158s Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build3 [2046 kB]
158s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-base s390x 5.38.2-3.2 [1961 kB]
158s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-modules-5.38 all 5.38.2-3.2 [3110 kB]
158s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gdbm s390x 3.12.2-3ubuntu1.1 [19.0 kB]
158s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main s390x man-db s390x 2.12.0-3build4 [1246 kB]
158s Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm6t64 s390x 1.23-5.1 [36.4 kB]
158s Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm-compat4t64 s390x 1.23-5.1 [6880 B]
158s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libperl5.38t64 s390x 5.38.2-3.2 [5007 kB]
159s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl s390x 5.38.2-3.2 [231 kB]
159s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-6 [763 kB]
159s Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-5ubuntu1 [21.1 kB]
159s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-2 s390x 2.1.28+dfsg1-5ubuntu1 [57.8 kB]
159s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfido2-1 s390x 1.14.0-1build1 [81.0 kB]
159s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcryptsetup12 s390x 2:2.7.0-1ubuntu2 [264 kB]
159s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dhcpcd-base s390x 1:10.0.6-1ubuntu2 [217 kB]
159s Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuv1t64 s390x 1.48.0-1.1 [101 kB]
159s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-host s390x 1:9.18.24-0ubuntu3 [50.5 kB]
159s Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-dnsutils s390x 1:9.18.24-0ubuntu3 [162 kB]
159s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-libs s390x 1:9.18.24-0ubuntu3 [1243 kB]
159s Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB]
159s Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnss-systemd s390x 255.4-1ubuntu5 [166 kB]
159s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudev1 s390x 255.4-1ubuntu5 [178 kB]
159s Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd s390x 255.4-1ubuntu5 [3533 kB]
159s Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udev s390x 255.4-1ubuntu5 [1887 kB]
159s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-sysv s390x 255.4-1ubuntu5 [11.9 kB]
159s Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-systemd s390x 255.4-1ubuntu5 [242 kB]
159s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd0 s390x 255.4-1ubuntu5 [443 kB]
159s Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules-bin s390x 1.5.3-5ubuntu3 [57.4 kB]
159s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules s390x 1.5.3-5ubuntu3 [289 kB]
159s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-runtime all 1.5.3-5ubuntu3 [40.8 kB]
159s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-user-session s390x 1.14.10-4ubuntu2 [9960 B]
159s Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapparmor1 s390x 4.0.0-beta3-0ubuntu2 [50.8 kB]
159s Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-system-bus-common all 1.14.10-4ubuntu2 [81.5 kB]
159s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-bin s390x 1.14.10-4ubuntu2 [41.4 kB]
159s Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus s390x 1.14.10-4ubuntu2 [24.3 kB]
159s Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-daemon s390x 1.14.10-4ubuntu2 [118 kB]
159s Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdbus-1-3 s390x 1.14.10-4ubuntu2 [213 kB]
159s Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmount1 s390x 2.39.3-9ubuntu2 [138 kB]
159s Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuuid1 s390x 2.39.3-9ubuntu2 [35.6 kB]
159s Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfdisk1 s390x 2.39.3-9ubuntu2 [151 kB]
159s Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mount s390x 2.39.3-9ubuntu2 [119 kB]
159s Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsqlite3-0 s390x 3.45.1-1ubuntu1 [747 kB]
159s Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg s390x 1.22.6ubuntu5 [1278 kB]
159s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-minimal s390x 3.12.2-0ubuntu1 [27.1 kB]
159s Get:169 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3 s390x 3.12.2-0ubuntu1 [24.1 kB]
160s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-stdlib s390x 3.12.2-0ubuntu1 [9804 B]
160s Get:171 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsmartcols1 s390x 2.39.3-9ubuntu2 [67.9 kB]
160s Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdextrautils s390x 2.39.3-9ubuntu2 [76.3 kB]
160s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main s390x groff-base s390x 1.23.0-3build1 [1049 kB]
160s Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x pinentry-curses s390x 1.2.1-3ubuntu4 [37.6 kB]
160s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-4 [56.4 kB]
160s Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxml2 s390x 2.9.14+dfsg-1.3ubuntu2 [818 kB]
160s Get:177 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbpf1 s390x 1:1.3.0-2build1 [176 kB]
160s Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libelf1t64 s390x 0.190-1.1build2 [69.7 kB]
160s Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-common all 1.3.4+ds-1.1 [8018 B]
160s Get:180 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lsof s390x 4.95.0-1build2 [248 kB]
160s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl2 s390x 1.3.0-3build2 [44.1 kB]
160s Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc3t64 s390x 1.3.4+ds-1.1 [85.8 kB]
160s Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main s390x iproute2 s390x 6.1.0-1ubuntu5 [1156 kB]
160s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-yaml s390x 6.0.1-2build1 [121 kB]
160s Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libprotobuf-c1 s390x 1.4.1-1ubuntu3 [23.4 kB]
160s Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnghttp2-14 s390x 1.59.0-1build1 [77.8 kB]
160s Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libproc2-0 s390x 2:4.0.4-4ubuntu2 [60.1 kB]
160s Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main s390x procps s390x 2:4.0.4-4ubuntu2 [724 kB]
160s Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main s390x coreutils s390x 9.4-3ubuntu3 [1482 kB]
160s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main s390x util-linux s390x 2.39.3-9ubuntu2 [1143 kB]
160s Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main s390x file s390x 1:5.45-3 [22.2 kB]
160s Get:192 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic-mgc s390x 1:5.45-3 [305 kB]
160s Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic1t64 s390x 1:5.45-3 [93.1 kB]
160s Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libplymouth5 s390x 24.004.60-1ubuntu6 [151 kB]
160s Get:195 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB]
160s Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main s390x multipath-tools s390x 0.9.4-5ubuntu6 [318 kB]
160s Get:197 http://ftpmaster.internal/ubuntu noble/main s390x liburcu8t64 s390x 0.14.0-3.1 [67.3 kB]
160s Get:198 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblocale-gettext-perl s390x 1.07-6ubuntu4 [15.8 kB]
160s Get:199 http://ftpmaster.internal/ubuntu noble-proposed/main s390x uuid-runtime s390x 2.39.3-9ubuntu2 [33.4 kB]
160s Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdebconfclient0 s390x 0.271ubuntu2 [11.4 kB]
160s Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage-common all 3.5-1build4 [10.1 kB]
160s Get:202 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage2 s390x 3.5-1build4 [96.7 kB]
160s Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main s390x install-info s390x 7.1-3build1 [64.5 kB]
161s Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libss2 s390x 1.47.0-2.4~exp1ubuntu2 [17.2 kB]
161s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main s390x eject s390x 2.39.3-9ubuntu2 [26.2 kB]
161s Get:206 http://ftpmaster.internal/ubuntu noble-proposed/main s390x krb5-locales all 1.20.1-6ubuntu1 [13.8 kB]
161s Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB]
161s Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libslang2 s390x 2.3.3-3build1 [501 kB]
161s Get:209 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-charwidth-perl s390x 0.04-11build2 [9484 B]
161s Get:210 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-iconv-perl s390x 1.7-8build2 [13.8 kB]
161s Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python-apt-common all 2.7.7 [19.8 kB]
161s Get:212 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-setuptools all 68.1.2-2ubuntu1 [396 kB]
161s Get:213 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB]
161s Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsyslog s390x 8.2312.0-3ubuntu7 [536 kB]
161s Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-tiny s390x 2:9.1.0016-1ubuntu6 [879 kB]
161s Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-common all 2:9.1.0016-1ubuntu6 [385 kB]
161s Get:217 http://ftpmaster.internal/ubuntu noble/main s390x xdg-user-dirs s390x 0.18-1 [18.5 kB]
161s Get:218 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xxd s390x 2:9.1.0016-1ubuntu6 [63.5 kB]
161s Get:219 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apparmor s390x 4.0.0-beta3-0ubuntu2 [710 kB]
161s Get:220 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ftp all 20230507-2build1 [4724 B]
161s Get:221 http://ftpmaster.internal/ubuntu noble-proposed/main s390x inetutils-telnet s390x 2:2.5-3ubuntu3 [105 kB]
161s Get:222 http://ftpmaster.internal/ubuntu noble-proposed/main s390x info s390x 7.1-3build1 [152 kB]
161s Get:223 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmuu1 s390x 2:1.1.3-3build1 [8860 B]
161s Get:224 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lshw s390x 02.19.git.2021.06.19.996aaad9c7-2build2 [346 kB]
161s Get:225 http://ftpmaster.internal/ubuntu noble/main s390x manpages all 6.05.01-1 [1340 kB]
161s Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mtr-tiny s390x 0.95-1.1build1 [57.0 kB]
161s Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth-theme-ubuntu-text s390x 24.004.60-1ubuntu6 [10.2 kB]
161s Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth s390x 24.004.60-1ubuntu6 [147 kB]
161s Get:229 http://ftpmaster.internal/ubuntu noble-proposed/main s390x telnet all 0.17+2.5-3ubuntu3 [3682 B]
161s Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main s390x usb.ids all 2024.03.18-1 [223 kB]
161s Get:231 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xz-utils s390x 5.6.0-0.2 [274 kB]
161s Get:232 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libllvm18 s390x 1:18.1.2-1ubuntu2 [33.4 MB]
163s Get:233 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang-cpp18 s390x 1:18.1.2-1ubuntu2 [16.1 MB]
164s Get:234 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpfcc s390x 0.29.1+ds-1ubuntu4 [697 kB]
164s Get:235 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-bpfcc all 0.29.1+ds-1ubuntu4 [40.2 kB]
164s Get:236 http://ftpmaster.internal/ubuntu noble/main s390x ieee-data all 20220827.1 [2113 kB]
164s Get:237 http://ftpmaster.internal/ubuntu noble/main s390x python3-netaddr all 0.8.0-2ubuntu1 [319 kB]
164s Get:238 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpfcc-tools all 0.29.1+ds-1ubuntu4 [687 kB]
164s Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang1-18 s390x 1:18.1.2-1ubuntu2 [9349 kB]
164s Get:240 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdw1t64 s390x 0.190-1.1build2 [286 kB]
164s Get:241 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpftrace s390x 0.20.2-1ubuntu1 [1139 kB]
164s Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cryptsetup-bin s390x 2:2.7.0-1ubuntu2 [211 kB]
164s Get:243 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg-dev all 1.22.6ubuntu5 [1074 kB]
165s Get:244 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdpkg-perl all 1.22.6ubuntu5 [269 kB]
165s Get:245 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
165s Get:246 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
165s Get:247 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu1 [37.4 kB]
165s Get:248 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-l10n all 2.4.4-2ubuntu15 [65.8 kB]
165s Get:249 http://ftpmaster.internal/ubuntu noble/main s390x hwdata all 0.379-1 [29.1 kB]
165s Get:250 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libibverbs1 s390x 50.0-2build1 [70.0 kB]
165s Get:251 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ibverbs-providers s390x 50.0-2build1 [408 kB]
165s Get:252 http://ftpmaster.internal/ubuntu noble/main s390x libaio1t64 s390x 0.3.113-6 [7290 B]
165s Get:253 http://ftpmaster.internal/ubuntu noble/main s390x libatm1t64 s390x 1:2.5.1-5.1 [24.5 kB]
165s Get:254 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu6 [20.2 kB]
165s Get:255 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfreetype6 s390x 2.13.2+dfsg-1build2 [437 kB]
165s Get:256 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu1 [150 kB]
165s Get:257 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB]
165s Get:258 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
165s Get:259 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB]
165s Get:260 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB]
165s Get:261 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsharpyuv0 s390x 1.3.2-0.4build2 [14.9 kB]
165s Get:262 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwebp7 s390x 1.3.2-0.4build2 [207 kB]
165s Get:263 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu1 [218 kB]
165s Get:264 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxpm4 s390x 1:3.5.17-1build1 [41.4 kB]
165s Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgd3 s390x 2.3.3-9ubuntu3 [141 kB]
165s Get:266 http://ftpmaster.internal/ubuntu noble/main s390x libc-devtools s390x 2.39-0ubuntu6 [30.6 kB]
165s Get:267 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-libc-dev s390x 6.8.0-20.20 [1592 kB]
165s Get:268 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB]
165s Get:269 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB]
165s Get:270 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu6 [1629 kB]
165s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-core-2.1-7 s390x 2.1.12-stable-9build1 [94.3 kB]
165s Get:272 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap-common all 2.6.7+dfsg-1~exp1ubuntu6 [31.3 kB]
165s Get:273 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-6.8.0-20-generic s390x 6.8.0-20.20 [21.0 MB]
168s Get:274 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-6.8.0-20-generic s390x 6.8.0-20.20 [9872 kB]
169s Get:275 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-extra-6.8.0-20-generic s390x 6.8.0-20.20 [11.7 MB]
170s Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-generic s390x 6.8.0-20.20+1 [1734 B]
170s Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-generic s390x 6.8.0-20.20+1 [9688 B]
170s Get:278 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-virtual s390x 6.8.0-20.20+1 [1682 B]
170s Get:279 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-virtual s390x 6.8.0-20.20+1 [9700 B]
170s Get:280 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-virtual s390x 6.8.0-20.20+1 [1642 B]
170s Get:281 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20 all 6.8.0-20.20 [13.6 MB]
173s Get:282 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20-generic s390x 6.8.0-20.20 [2579 kB]
174s Get:283 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-generic s390x 6.8.0-20.20+1 [9608 B]
174s Get:284 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-common all 6.8.0-20.20 [437 kB]
174s Get:285 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20 s390x 6.8.0-20.20 [2674 kB]
175s Get:286 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20-generic s390x 6.8.0-20.20 [1724 B]
175s Get:287 http://ftpmaster.internal/ubuntu noble/main s390x manpages-dev all 6.05.01-1 [2018 kB]
175s Get:288 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-distutils all 3.12.2-3ubuntu1.1 [133 kB]
175s Get:289 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB]
175s Get:290 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pyrsistent s390x 0.20.0-1build1 [55.8 kB]
175s Get:291 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-typing-extensions all 4.10.0-1 [60.7 kB]
175s Get:292 http://ftpmaster.internal/ubuntu noble-proposed/main s390x s390-tools-data all 2.31.0-0ubuntu3 [17.8 kB]
175s Get:293 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-kernel-accessories s390x 1.536build1 [10.5 kB]
175s Get:294 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kpartx s390x 0.9.4-5ubuntu6 [32.8 kB]
176s Preconfiguring packages ...
176s Fetched 223 MB in 22s (10.1 MB/s)
176s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
176s Preparing to unpack .../motd-news-config_13ubuntu8_all.deb ...
176s Unpacking motd-news-config (13ubuntu8) over (13ubuntu7) ...
176s Preparing to unpack .../base-files_13ubuntu8_s390x.deb ...
176s Unpacking base-files (13ubuntu8) over (13ubuntu7) ...
176s Setting up base-files (13ubuntu8) ...
177s motd-news.service is a disabled or a static unit not running, not starting it.
177s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
177s Preparing to unpack .../bash_5.2.21-2ubuntu3_s390x.deb ...
177s Unpacking bash (5.2.21-2ubuntu3) over (5.2.21-2ubuntu2) ...
177s Setting up bash (5.2.21-2ubuntu3) ...
177s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
177s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
177s Preparing to unpack .../bsdutils_1%3a2.39.3-9ubuntu2_s390x.deb ...
177s Unpacking bsdutils (1:2.39.3-9ubuntu2) over (1:2.39.3-6ubuntu2) ...
177s Setting up bsdutils (1:2.39.3-9ubuntu2) ...
177s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 35%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
177s Preparing to unpack .../0-libbrotli1_1.1.0-2build1_s390x.deb ...
177s Unpacking libbrotli1:s390x (1.1.0-2build1) over (1.1.0-2) ...
177s Preparing to unpack .../1-libgssapi-krb5-2_1.20.1-6ubuntu1_s390x.deb ...
177s Unpacking libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ...
177s Preparing to unpack .../2-libkrb5-3_1.20.1-6ubuntu1_s390x.deb ...
177s Unpacking libkrb5-3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ...
177s Preparing to unpack .../3-libkrb5support0_1.20.1-6ubuntu1_s390x.deb ...
177s Unpacking libkrb5support0:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ...
177s Preparing to unpack .../4-libk5crypto3_1.20.1-6ubuntu1_s390x.deb ...
177s Unpacking libk5crypto3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ...
177s Preparing to unpack .../5-libcom-err2_1.47.0-2.4~exp1ubuntu2_s390x.deb ...
177s Unpacking libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ...
177s Preparing to unpack .../6-zlib1g_1%3a1.3.dfsg-3.1ubuntu1_s390x.deb ...
177s Unpacking zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ...
177s Setting up zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) ...
177s (Reading database ... 
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(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
177s Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2build6_s390x.deb ...
177s Unpacking librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) over (2.4+20151223.gitfa8646d.1-2build4) ...
177s Preparing to unpack .../udisks2_2.10.1-6_s390x.deb ...
177s Unpacking udisks2 (2.10.1-6) over (2.10.1-1ubuntu2) ...
177s Preparing to unpack .../libudisks2-0_2.10.1-6_s390x.deb ...
177s Unpacking libudisks2-0:s390x (2.10.1-6) over (2.10.1-1ubuntu2) ...
177s Preparing to unpack .../libblkid1_2.39.3-9ubuntu2_s390x.deb ...
177s Unpacking libblkid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ...
177s Setting up libblkid1:s390x (2.39.3-9ubuntu2) ...
178s (Reading database ... 
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(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
178s Preparing to unpack .../liblzma5_5.6.0-0.2_s390x.deb ...
178s Unpacking liblzma5:s390x (5.6.0-0.2) over (5.4.5-0.3) ...
178s Setting up liblzma5:s390x (5.6.0-0.2) ...
178s (Reading database ... 
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178s Preparing to unpack .../0-kmod_31+20240202-2ubuntu4_s390x.deb ...
178s Unpacking kmod (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ...
178s Preparing to unpack .../1-libkmod2_31+20240202-2ubuntu4_s390x.deb ...
178s Unpacking libkmod2:s390x (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ...
178s Preparing to unpack .../2-systemd-dev_255.4-1ubuntu5_all.deb ...
178s Unpacking systemd-dev (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
178s Preparing to unpack .../3-systemd-timesyncd_255.4-1ubuntu5_s390x.deb ...
178s Unpacking systemd-timesyncd (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
178s Preparing to unpack .../4-dbus-session-bus-common_1.14.10-4ubuntu2_all.deb ...
178s Unpacking dbus-session-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ...
178s Preparing to unpack .../5-libaudit-common_1%3a3.1.2-2.1_all.deb ...
178s Unpacking libaudit-common (1:3.1.2-2.1) over (1:3.1.2-2) ...
178s Setting up libaudit-common (1:3.1.2-2.1) ...
178s (Reading database ... 
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178s Preparing to unpack .../libcap-ng0_0.8.4-2build1_s390x.deb ...
178s Unpacking libcap-ng0:s390x (0.8.4-2build1) over (0.8.4-2) ...
178s Setting up libcap-ng0:s390x (0.8.4-2build1) ...
178s (Reading database ... 
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178s Preparing to unpack .../libaudit1_1%3a3.1.2-2.1_s390x.deb ...
178s Unpacking libaudit1:s390x (1:3.1.2-2.1) over (1:3.1.2-2) ...
178s Setting up libaudit1:s390x (1:3.1.2-2.1) ...
178s (Reading database ... 
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178s Preparing to unpack .../libpam0g_1.5.3-5ubuntu3_s390x.deb ...
178s Unpacking libpam0g:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ...
178s Setting up libpam0g:s390x (1.5.3-5ubuntu3) ...
178s (Reading database ... 
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178s Preparing to unpack .../libselinux1_3.5-2ubuntu1_s390x.deb ...
178s Unpacking libselinux1:s390x (3.5-2ubuntu1) over (3.5-2build1) ...
178s Setting up libselinux1:s390x (3.5-2ubuntu1) ...
178s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested:
178s  s390-tools depends on libcurl4 (>= 7.16.2).
178s  curl depends on libcurl4 (= 8.5.0-2ubuntu2).
178s 
178s (Reading database ... 
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178s Removing libcurl4:s390x (8.5.0-2ubuntu2) ...
178s Selecting previously unselected package libcurl4t64:s390x.
178s (Reading database ... 
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178s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu8_s390x.deb ...
178s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu8) ...
178s Preparing to unpack .../curl_8.5.0-2ubuntu8_s390x.deb ...
178s Unpacking curl (8.5.0-2ubuntu8) over (8.5.0-2ubuntu2) ...
178s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested:
178s  wget depends on libpsl5 (>= 0.16.0).
178s  libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0).
178s 
178s (Reading database ... 
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178s Removing libpsl5:s390x (0.21.2-1build1) ...
178s Selecting previously unselected package libpsl5t64:s390x.
178s (Reading database ... 
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178s Preparing to unpack .../00-libpsl5t64_0.21.2-1.1_s390x.deb ...
178s Unpacking libpsl5t64:s390x (0.21.2-1.1) ...
178s Preparing to unpack .../01-wget_1.21.4-1ubuntu2_s390x.deb ...
178s Unpacking wget (1.21.4-1ubuntu2) over (1.21.4-1ubuntu1) ...
178s Preparing to unpack .../02-tnftp_20230507-2build1_s390x.deb ...
178s Unpacking tnftp (20230507-2build1) over (20230507-2) ...
178s Preparing to unpack .../03-tcpdump_4.99.4-3ubuntu2_s390x.deb ...
178s Unpacking tcpdump (4.99.4-3ubuntu2) over (4.99.4-3ubuntu1) ...
178s Preparing to unpack .../04-libsystemd-shared_255.4-1ubuntu5_s390x.deb ...
178s Unpacking libsystemd-shared:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
178s Preparing to unpack .../05-systemd-resolved_255.4-1ubuntu5_s390x.deb ...
178s Unpacking systemd-resolved (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
178s Preparing to unpack .../06-sudo_1.9.15p5-3ubuntu3_s390x.deb ...
178s Unpacking sudo (1.9.15p5-3ubuntu3) over (1.9.15p5-3ubuntu1) ...
178s Preparing to unpack .../07-rsync_3.2.7-1build1_s390x.deb ...
178s Unpacking rsync (3.2.7-1build1) over (3.2.7-1) ...
178s Preparing to unpack .../08-python3-cryptography_41.0.7-4build2_s390x.deb ...
179s Unpacking python3-cryptography (41.0.7-4build2) over (41.0.7-3) ...
179s Preparing to unpack .../09-openssl_3.0.13-0ubuntu2_s390x.deb ...
179s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ...
179s Preparing to unpack .../10-openssh-sftp-server_1%3a9.6p1-3ubuntu11_s390x.deb ...
179s Unpacking openssh-sftp-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ...
179s Preparing to unpack .../11-openssh-client_1%3a9.6p1-3ubuntu11_s390x.deb ...
179s Unpacking openssh-client (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ...
179s Preparing to unpack .../12-openssh-server_1%3a9.6p1-3ubuntu11_s390x.deb ...
179s Unpacking openssh-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ...
179s Preparing to unpack .../13-libssh-4_0.10.6-2build1_s390x.deb ...
179s Unpacking libssh-4:s390x (0.10.6-2build1) over (0.10.6-2) ...
179s Preparing to unpack .../14-libsasl2-modules_2.1.28+dfsg1-5ubuntu1_s390x.deb ...
179s Unpacking libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ...
179s Preparing to unpack .../15-python3.12_3.12.2-4build3_s390x.deb ...
179s Unpacking python3.12 (3.12.2-4build3) over (3.12.2-1) ...
179s Preparing to unpack .../16-python3.12-minimal_3.12.2-4build3_s390x.deb ...
179s Unpacking python3.12-minimal (3.12.2-4build3) over (3.12.2-1) ...
179s Preparing to unpack .../17-libpython3.12-minimal_3.12.2-4build3_s390x.deb ...
179s Unpacking libpython3.12-minimal:s390x (3.12.2-4build3) over (3.12.2-1) ...
179s dpkg: libparted2:s390x: dependency problems, but removing anyway as you requested:
179s  parted depends on libparted2 (= 3.6-3).
179s 
179s (Reading database ... 
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179s Removing libparted2:s390x (3.6-3) ...
179s Selecting previously unselected package libparted2t64:s390x.
179s (Reading database ... 
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179s Preparing to unpack .../00-libparted2t64_3.6-3.1build2_s390x.deb ...
179s Unpacking libparted2t64:s390x (3.6-3.1build2) ...
179s Preparing to unpack .../01-parted_3.6-3.1build2_s390x.deb ...
179s Unpacking parted (3.6-3.1build2) over (3.6-3) ...
179s Preparing to unpack .../02-python3.11_3.11.8-1build4_s390x.deb ...
179s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ...
179s Preparing to unpack .../03-python3.11-minimal_3.11.8-1build4_s390x.deb ...
179s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ...
179s Preparing to unpack .../04-libpython3.11-minimal_3.11.8-1build4_s390x.deb ...
179s Unpacking libpython3.11-minimal:s390x (3.11.8-1build4) over (3.11.8-1) ...
180s Preparing to unpack .../05-libpython3.11-stdlib_3.11.8-1build4_s390x.deb ...
180s Unpacking libpython3.11-stdlib:s390x (3.11.8-1build4) over (3.11.8-1) ...
180s Preparing to unpack .../06-shared-mime-info_2.4-1build1_s390x.deb ...
180s Unpacking shared-mime-info (2.4-1build1) over (2.4-1) ...
180s Preparing to unpack .../07-gir1.2-girepository-2.0_1.79.1-1ubuntu6_s390x.deb ...
180s Unpacking gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ...
180s Preparing to unpack .../08-gir1.2-glib-2.0_2.79.3-3ubuntu5_s390x.deb ...
180s Unpacking gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ...
180s Preparing to unpack .../09-libgirepository-1.0-1_1.79.1-1ubuntu6_s390x.deb ...
180s Unpacking libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ...
180s Preparing to unpack .../10-python3-gi_3.47.0-3build1_s390x.deb ...
180s Unpacking python3-gi (3.47.0-3build1) over (3.47.0-3) ...
180s Preparing to unpack .../11-python3-dbus_1.3.2-5build2_s390x.deb ...
180s Unpacking python3-dbus (1.3.2-5build2) over (1.3.2-5build1) ...
180s Selecting previously unselected package libnetplan1:s390x.
180s Preparing to unpack .../12-libnetplan1_1.0-1_s390x.deb ...
180s Unpacking libnetplan1:s390x (1.0-1) ...
180s Preparing to unpack .../13-python3-netplan_1.0-1_s390x.deb ...
180s Unpacking python3-netplan (1.0-1) over (0.107.1-3) ...
180s Preparing to unpack .../14-netplan-generator_1.0-1_s390x.deb ...
180s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
180s Unpacking netplan-generator (1.0-1) over (0.107.1-3) ...
180s Preparing to unpack .../15-netplan.io_1.0-1_s390x.deb ...
180s Unpacking netplan.io (1.0-1) over (0.107.1-3) ...
180s Preparing to unpack .../16-libxmlb2_0.3.15-1build1_s390x.deb ...
180s Unpacking libxmlb2:s390x (0.3.15-1build1) over (0.3.15-1) ...
180s dpkg: libgpgme11:s390x: dependency problems, but removing anyway as you requested:
180s  libvolume-key1:s390x depends on libgpgme11 (>= 1.4.1).
180s  libjcat1:s390x depends on libgpgme11 (>= 1.2.0).
180s 
180s (Reading database ... 
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180s Removing libgpgme11:s390x (1.18.0-4ubuntu1) ...
180s Selecting previously unselected package libgpgme11t64:s390x.
180s (Reading database ... 
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180s Preparing to unpack .../00-libgpgme11t64_1.18.0-4.1ubuntu3_s390x.deb ...
180s Unpacking libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ...
180s Preparing to unpack .../01-libvolume-key1_0.3.12-7build1_s390x.deb ...
180s Unpacking libvolume-key1:s390x (0.3.12-7build1) over (0.3.12-5build2) ...
180s Preparing to unpack .../02-libqrtr-glib0_1.2.2-1ubuntu3_s390x.deb ...
180s Unpacking libqrtr-glib0:s390x (1.2.2-1ubuntu3) over (1.2.2-1ubuntu2) ...
180s Preparing to unpack .../03-libqmi-glib5_1.35.2-0ubuntu1_s390x.deb ...
180s Unpacking libqmi-glib5:s390x (1.35.2-0ubuntu1) over (1.34.0-2) ...
180s Preparing to unpack .../04-libqmi-proxy_1.35.2-0ubuntu1_s390x.deb ...
180s Unpacking libqmi-proxy (1.35.2-0ubuntu1) over (1.34.0-2) ...
180s Preparing to unpack .../05-libpolkit-agent-1-0_124-1ubuntu1_s390x.deb ...
180s Unpacking libpolkit-agent-1-0:s390x (124-1ubuntu1) over (124-1) ...
180s Preparing to unpack .../06-libpolkit-gobject-1-0_124-1ubuntu1_s390x.deb ...
180s Unpacking libpolkit-gobject-1-0:s390x (124-1ubuntu1) over (124-1) ...
181s Preparing to unpack .../07-libmm-glib0_1.23.4-0ubuntu1_s390x.deb ...
181s Unpacking libmm-glib0:s390x (1.23.4-0ubuntu1) over (1.22.0-3) ...
181s Preparing to unpack .../08-libmbim-glib4_1.31.2-0ubuntu2_s390x.deb ...
181s Unpacking libmbim-glib4:s390x (1.31.2-0ubuntu2) over (1.30.0-1) ...
181s Preparing to unpack .../09-libmbim-proxy_1.31.2-0ubuntu2_s390x.deb ...
181s Unpacking libmbim-proxy (1.31.2-0ubuntu2) over (1.30.0-1) ...
181s Preparing to unpack .../10-libjson-glib-1.0-common_1.8.0-2build1_all.deb ...
181s Unpacking libjson-glib-1.0-common (1.8.0-2build1) over (1.8.0-2) ...
181s Preparing to unpack .../11-libjson-glib-1.0-0_1.8.0-2build1_s390x.deb ...
181s Unpacking libjson-glib-1.0-0:s390x (1.8.0-2build1) over (1.8.0-2) ...
181s Preparing to unpack .../12-libgusb2_0.4.8-1build1_s390x.deb ...
181s Unpacking libgusb2:s390x (0.4.8-1build1) over (0.4.8-1) ...
181s Preparing to unpack .../13-libgudev-1.0-0_1%3a238-3ubuntu2_s390x.deb ...
181s Unpacking libgudev-1.0-0:s390x (1:238-3ubuntu2) over (1:238-3) ...
181s dpkg: libarchive13:s390x: dependency problems, but removing anyway as you requested:
181s  fwupd depends on libarchive13 (>= 3.2.1).
181s 
181s (Reading database ... 
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181s Removing libarchive13:s390x (3.7.2-1ubuntu2) ...
181s Selecting previously unselected package libarchive13t64:s390x.
181s (Reading database ... 
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181s Preparing to unpack .../libarchive13t64_3.7.2-1.1ubuntu2_s390x.deb ...
181s Unpacking libarchive13t64:s390x (3.7.2-1.1ubuntu2) ...
181s Preparing to unpack .../fwupd_1.9.15-2_s390x.deb ...
181s Unpacking fwupd (1.9.15-2) over (1.9.14-1) ...
181s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested:
181s  libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0).
181s 
181s (Reading database ... 
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181s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ...
181s Selecting previously unselected package libcurl3t64-gnutls:s390x.
181s (Reading database ... 
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181s Preparing to unpack .../0-libcurl3t64-gnutls_8.5.0-2ubuntu8_s390x.deb ...
181s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ...
181s Preparing to unpack .../1-libfwupd2_1.9.15-2_s390x.deb ...
181s Unpacking libfwupd2:s390x (1.9.15-2) over (1.9.14-1) ...
181s Preparing to unpack .../2-libblockdev3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../3-libblockdev-utils3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-utils3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../4-libblockdev-swap3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-swap3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../5-libblockdev-part3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-part3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s dpkg: libnvme1: dependency problems, but removing anyway as you requested:
181s  libblockdev-nvme3:s390x depends on libnvme1 (>= 1.7.1).
181s 
181s (Reading database ... 
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181s Removing libnvme1 (1.8-2) ...
181s Selecting previously unselected package libnvme1t64.
181s (Reading database ... 
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181s Preparing to unpack .../0-libnvme1t64_1.8-3_s390x.deb ...
181s Unpacking libnvme1t64 (1.8-3) ...
181s Preparing to unpack .../1-libblockdev-nvme3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-nvme3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../2-libblockdev-mdraid3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-mdraid3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../3-libblockdev-loop3_3.1.0-1build1_s390x.deb ...
181s Unpacking libblockdev-loop3:s390x (3.1.0-1build1) over (3.1.0-1) ...
181s Preparing to unpack .../4-logsave_1.47.0-2.4~exp1ubuntu2_s390x.deb ...
181s Unpacking logsave (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ...
181s Preparing to unpack .../5-e2fsprogs-l10n_1.47.0-2.4~exp1ubuntu2_all.deb ...
181s Unpacking e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ...
181s dpkg: libext2fs2:s390x: dependency problems, but removing anyway as you requested:
181s  libblockdev-fs3:s390x depends on libext2fs2 (>= 1.42.11).
181s  e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1).
181s  btrfs-progs depends on libext2fs2 (>= 1.42).
181s 
181s (Reading database ... 
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181s Removing libext2fs2:s390x (1.47.0-2ubuntu1) ...
181s Selecting previously unselected package libext2fs2t64:s390x.
181s (Reading database ... 
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181s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu2_s390x.deb ...
181s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2 to /lib/s390x-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64'
181s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2.3 to /lib/s390x-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64'
181s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2 to /lib/s390x-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64'
181s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2.4 to /lib/s390x-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64'
181s Unpacking libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ...
181s Setting up libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) ...
181s Setting up libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ...
181s (Reading database ... 
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181s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu2_s390x.deb ...
181s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ...
181s dpkg: libreiserfscore0: dependency problems, but removing anyway as you requested:
181s  btrfs-progs depends on libreiserfscore0 (>= 1:3.6.27).
181s 
181s (Reading database ... 
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181s Removing libreiserfscore0 (1:3.6.27-7) ...
181s Selecting previously unselected package libreiserfscore0t64.
182s (Reading database ... 
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182s Preparing to unpack .../libreiserfscore0t64_1%3a3.6.27-7.1_s390x.deb ...
182s Unpacking libreiserfscore0t64 (1:3.6.27-7.1) ...
182s Preparing to unpack .../btrfs-progs_6.6.3-1.1build1_s390x.deb ...
182s Unpacking btrfs-progs (6.6.3-1.1build1) over (6.6.3-1.1) ...
182s Preparing to unpack .../libblockdev-fs3_3.1.0-1build1_s390x.deb ...
182s Unpacking libblockdev-fs3:s390x (3.1.0-1build1) over (3.1.0-1) ...
182s Preparing to unpack .../libblockdev-crypto3_3.1.0-1build1_s390x.deb ...
182s Unpacking libblockdev-crypto3:s390x (3.1.0-1build1) over (3.1.0-1) ...
182s Preparing to unpack .../bolt_0.9.6-2build1_s390x.deb ...
182s Unpacking bolt (0.9.6-2build1) over (0.9.6-2) ...
182s dpkg: libglib2.0-0:s390x: dependency problems, but removing anyway as you requested:
182s  s390-tools depends on libglib2.0-0 (>= 2.77.0).
182s  libnetplan0:s390x depends on libglib2.0-0 (>= 2.75.3).
182s  libjcat1:s390x depends on libglib2.0-0 (>= 2.75.3).
182s 
182s (Reading database ... 
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182s Removing libglib2.0-0:s390x (2.79.2-1~ubuntu1) ...
182s Selecting previously unselected package libglib2.0-0t64:s390x.
182s (Reading database ... 
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182s Preparing to unpack .../0-libglib2.0-0t64_2.79.3-3ubuntu5_s390x.deb ...
182s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:s390x.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled...
182s removed '/var/lib/dpkg/info/libglib2.0-0:s390x.postrm'
182s Unpacking libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ...
182s Preparing to unpack .../1-libjcat1_0.2.0-2build2_s390x.deb ...
182s Unpacking libjcat1:s390x (0.2.0-2build2) over (0.2.0-2) ...
182s Preparing to unpack .../2-libldap2_2.6.7+dfsg-1~exp1ubuntu6_s390x.deb ...
182s Unpacking libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ...
182s Preparing to unpack .../3-ubuntu-pro-client-l10n_31.2.2_s390x.deb ...
182s Unpacking ubuntu-pro-client-l10n (31.2.2) over (31.1) ...
182s Preparing to unpack .../4-ubuntu-pro-client_31.2.2_s390x.deb ...
182s Unpacking ubuntu-pro-client (31.2.2) over (31.1) ...
182s Preparing to unpack .../5-gnupg-utils_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking gnupg-utils (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../6-keyboxd_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking keyboxd (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s dpkg: libnpth0:s390x: dependency problems, but removing anyway as you requested:
182s  gpgv depends on libnpth0 (>= 0.90).
182s  gpgsm depends on libnpth0 (>= 0.90).
182s  gpg-agent depends on libnpth0 (>= 0.90).
182s  gpg depends on libnpth0 (>= 0.90).
182s  dirmngr depends on libnpth0 (>= 0.90).
182s 
182s (Reading database ... 
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182s Removing libnpth0:s390x (1.6-3build2) ...
182s Selecting previously unselected package libnpth0t64:s390x.
182s (Reading database ... 
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182s Preparing to unpack .../libnpth0t64_1.6-3.1_s390x.deb ...
182s Unpacking libnpth0t64:s390x (1.6-3.1) ...
182s Setting up libnpth0t64:s390x (1.6-3.1) ...
182s (Reading database ... 
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182s Preparing to unpack .../gpgv_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking gpgv (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Setting up gpgv (2.4.4-2ubuntu15) ...
182s (Reading database ... 
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182s Preparing to unpack .../0-gpg-wks-client_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking gpg-wks-client (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../1-gpg-agent_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking gpg-agent (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../2-gpg_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking gpg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../3-dirmngr_2.4.4-2ubuntu15_s390x.deb ...
182s Unpacking dirmngr (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../4-gnupg_2.4.4-2ubuntu15_all.deb ...
182s Unpacking gnupg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
182s Preparing to unpack .../5-python3-apt_2.7.7_s390x.deb ...
182s Unpacking python3-apt (2.7.7) over (2.7.6) ...
182s Preparing to unpack .../6-apt-utils_2.7.14_s390x.deb ...
182s Unpacking apt-utils (2.7.14) over (2.7.12) ...
183s dpkg: libapt-pkg6.0:s390x: dependency problems, but removing anyway as you requested:
183s  apt depends on libapt-pkg6.0 (>= 2.7.12).
183s 
183s (Reading database ... 
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183s Removing libapt-pkg6.0:s390x (2.7.12) ...
183s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested:
183s  libhogweed6:s390x depends on libnettle8.
183s  libgnutls30:s390x depends on libnettle8 (>= 3.9~).
183s 
183s Removing libnettle8:s390x (3.9.1-2) ...
183s Selecting previously unselected package libapt-pkg6.0t64:s390x.
183s (Reading database ... 
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183s Preparing to unpack .../libapt-pkg6.0t64_2.7.14_s390x.deb ...
183s Unpacking libapt-pkg6.0t64:s390x (2.7.14) ...
183s Setting up libapt-pkg6.0t64:s390x (2.7.14) ...
183s Selecting previously unselected package libnettle8t64:s390x.
183s (Reading database ... 
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183s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ...
183s Unpacking libnettle8t64:s390x (3.9.1-2.2) ...
183s Setting up libnettle8t64:s390x (3.9.1-2.2) ...
183s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested:
183s  libgnutls30:s390x depends on libhogweed6 (>= 3.6).
183s 
183s (Reading database ... 
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183s Removing libhogweed6:s390x (3.9.1-2) ...
183s Selecting previously unselected package libhogweed6t64:s390x.
183s (Reading database ... 
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183s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ...
183s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ...
183s Setting up libhogweed6t64:s390x (3.9.1-2.2) ...
183s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested:
183s  apt depends on libgnutls30 (>= 3.8.1).
183s 
183s (Reading database ... 
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183s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ...
183s Selecting previously unselected package libgnutls30t64:s390x.
183s (Reading database ... 
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183s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ...
183s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ...
183s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ...
183s (Reading database ... 
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183s Preparing to unpack .../archives/apt_2.7.14_s390x.deb ...
183s Unpacking apt (2.7.14) over (2.7.12) ...
183s Setting up apt (2.7.14) ...
184s (Reading database ... 
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184s Preparing to unpack .../gpgconf_2.4.4-2ubuntu15_s390x.deb ...
184s Unpacking gpgconf (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
184s Preparing to unpack .../gpgsm_2.4.4-2ubuntu15_s390x.deb ...
184s Unpacking gpgsm (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ...
184s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested:
184s  libpython3.12-stdlib:s390x depends on libreadline8 (>= 7.0~beta).
184s  gawk depends on libreadline8 (>= 6.0).
184s  fdisk depends on libreadline8 (>= 6.0).
184s 
184s (Reading database ... 
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184s Removing libreadline8:s390x (8.2-3) ...
184s Selecting previously unselected package libreadline8t64:s390x.
184s (Reading database ... 
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184s Preparing to unpack .../libreadline8t64_8.2-4_s390x.deb ...
184s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
184s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
184s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
184s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
184s Unpacking libreadline8t64:s390x (8.2-4) ...
184s Setting up libreadline8t64:s390x (8.2-4) ...
184s (Reading database ... 
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184s Preparing to unpack .../gawk_1%3a5.2.1-2build2_s390x.deb ...
184s Unpacking gawk (1:5.2.1-2build2) over (1:5.2.1-2) ...
184s Preparing to unpack .../fdisk_2.39.3-9ubuntu2_s390x.deb ...
184s Unpacking fdisk (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ...
184s Preparing to unpack .../libpython3.12-stdlib_3.12.2-4build3_s390x.deb ...
184s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build3) over (3.12.2-1) ...
184s Preparing to unpack .../perl-base_5.38.2-3.2_s390x.deb ...
184s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ...
184s Setting up perl-base (5.38.2-3.2) ...
184s (Reading database ... 
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184s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2_all.deb ...
184s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ...
185s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_s390x.deb ...
185s Unpacking python3-gdbm:s390x (3.12.2-3ubuntu1.1) over (3.11.5-1) ...
185s Preparing to unpack .../man-db_2.12.0-3build4_s390x.deb ...
185s Unpacking man-db (2.12.0-3build4) over (2.12.0-3) ...
185s dpkg: libgdbm-compat4:s390x: dependency problems, but removing anyway as you requested:
185s  libperl5.38:s390x depends on libgdbm-compat4 (>= 1.18-3).
185s 
185s (Reading database ... 
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185s Removing libgdbm-compat4:s390x (1.23-5) ...
185s dpkg: libgdbm6:s390x: dependency problems, but removing anyway as you requested:
185s  libperl5.38:s390x depends on libgdbm6 (>= 1.21).
185s 
185s Removing libgdbm6:s390x (1.23-5) ...
185s Selecting previously unselected package libgdbm6t64:s390x.
185s (Reading database ... 
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185s Preparing to unpack .../libgdbm6t64_1.23-5.1_s390x.deb ...
185s Unpacking libgdbm6t64:s390x (1.23-5.1) ...
185s Selecting previously unselected package libgdbm-compat4t64:s390x.
185s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_s390x.deb ...
185s Unpacking libgdbm-compat4t64:s390x (1.23-5.1) ...
185s dpkg: libperl5.38:s390x: dependency problems, but removing anyway as you requested:
185s  perl depends on libperl5.38 (= 5.38.2-3).
185s 
185s (Reading database ... 
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185s Removing libperl5.38:s390x (5.38.2-3) ...
185s Selecting previously unselected package libperl5.38t64:s390x.
185s (Reading database ... 
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185s Preparing to unpack .../libperl5.38t64_5.38.2-3.2_s390x.deb ...
185s Unpacking libperl5.38t64:s390x (5.38.2-3.2) ...
185s Preparing to unpack .../perl_5.38.2-3.2_s390x.deb ...
185s Unpacking perl (5.38.2-3.2) over (5.38.2-3) ...
185s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested:
185s  libsasl2-modules-db:s390x depends on libdb5.3.
185s  libpam-modules:s390x depends on libdb5.3.
185s  iproute2 depends on libdb5.3.
185s 
185s (Reading database ... 
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185s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ...
185s Selecting previously unselected package libdb5.3t64:s390x.
185s (Reading database ... 
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185s Preparing to unpack .../0-libdb5.3t64_5.3.28+dfsg2-6_s390x.deb ...
185s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-6) ...
185s Preparing to unpack .../1-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu1_s390x.deb ...
185s Unpacking libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ...
185s Preparing to unpack .../2-libsasl2-2_2.1.28+dfsg1-5ubuntu1_s390x.deb ...
185s Unpacking libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ...
185s Preparing to unpack .../3-libfido2-1_1.14.0-1build1_s390x.deb ...
185s Unpacking libfido2-1:s390x (1.14.0-1build1) over (1.14.0-1) ...
185s Preparing to unpack .../4-libcryptsetup12_2%3a2.7.0-1ubuntu2_s390x.deb ...
185s Unpacking libcryptsetup12:s390x (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ...
186s Preparing to unpack .../5-dhcpcd-base_1%3a10.0.6-1ubuntu2_s390x.deb ...
186s Unpacking dhcpcd-base (1:10.0.6-1ubuntu2) over (1:10.0.6-1ubuntu1) ...
186s dpkg: libuv1:s390x: dependency problems, but removing anyway as you requested:
186s  bind9-libs:s390x depends on libuv1 (>= 1.40.0).
186s 
186s (Reading database ... 
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186s Removing libuv1:s390x (1.48.0-1) ...
186s Selecting previously unselected package libuv1t64:s390x.
186s (Reading database ... 
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186s Preparing to unpack .../libuv1t64_1.48.0-1.1_s390x.deb ...
186s Unpacking libuv1t64:s390x (1.48.0-1.1) ...
186s Preparing to unpack .../bind9-host_1%3a9.18.24-0ubuntu3_s390x.deb ...
186s Unpacking bind9-host (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ...
186s Preparing to unpack .../bind9-dnsutils_1%3a9.18.24-0ubuntu3_s390x.deb ...
186s Unpacking bind9-dnsutils (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ...
186s Preparing to unpack .../bind9-libs_1%3a9.18.24-0ubuntu3_s390x.deb ...
186s Unpacking bind9-libs:s390x (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ...
186s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested:
186s  systemd depends on libssl3 (>= 3.0.0).
186s  s390-tools depends on libssl3 (>= 3.0.0).
186s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
186s 
186s (Reading database ... 
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186s Removing libssl3:s390x (3.0.10-1ubuntu4) ...
186s Selecting previously unselected package libssl3t64:s390x.
186s (Reading database ... 
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186s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ...
186s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ...
186s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ...
186s (Reading database ... 
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186s Preparing to unpack .../libnss-systemd_255.4-1ubuntu5_s390x.deb ...
186s Unpacking libnss-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
186s Preparing to unpack .../libudev1_255.4-1ubuntu5_s390x.deb ...
186s Unpacking libudev1:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
186s Setting up libudev1:s390x (255.4-1ubuntu5) ...
186s (Reading database ... 
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186s Preparing to unpack .../systemd_255.4-1ubuntu5_s390x.deb ...
186s Unpacking systemd (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
186s Preparing to unpack .../udev_255.4-1ubuntu5_s390x.deb ...
186s Unpacking udev (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
186s Preparing to unpack .../libsystemd0_255.4-1ubuntu5_s390x.deb ...
186s Unpacking libsystemd0:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
186s Setting up libsystemd0:s390x (255.4-1ubuntu5) ...
186s Setting up libcryptsetup12:s390x (2:2.7.0-1ubuntu2) ...
186s Setting up libkmod2:s390x (31+20240202-2ubuntu4) ...
186s Setting up libsystemd-shared:s390x (255.4-1ubuntu5) ...
186s Setting up systemd-dev (255.4-1ubuntu5) ...
186s Setting up systemd (255.4-1ubuntu5) ...
187s (Reading database ... 
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187s Preparing to unpack .../systemd-sysv_255.4-1ubuntu5_s390x.deb ...
187s Unpacking systemd-sysv (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
187s Preparing to unpack .../libpam-systemd_255.4-1ubuntu5_s390x.deb ...
187s Unpacking libpam-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ...
187s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu3_s390x.deb ...
187s Unpacking libpam-modules-bin (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ...
187s Setting up libpam-modules-bin (1.5.3-5ubuntu3) ...
188s pam_namespace.service is a disabled or a static unit not running, not starting it.
188s (Reading database ... 
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188s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu3_s390x.deb ...
188s Unpacking libpam-modules:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ...
188s Setting up libpam-modules:s390x (1.5.3-5ubuntu3) ...
188s Installing new version of config file /etc/security/namespace.init ...
188s (Reading database ... 
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188s Preparing to unpack .../libpam-runtime_1.5.3-5ubuntu3_all.deb ...
188s Unpacking libpam-runtime (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ...
188s Setting up libpam-runtime (1.5.3-5ubuntu3) ...
188s (Reading database ... 
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188s Preparing to unpack .../0-dbus-user-session_1.14.10-4ubuntu2_s390x.deb ...
188s Unpacking dbus-user-session (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ...
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188s Preparing to unpack .../7-libmount1_2.39.3-9ubuntu2_s390x.deb ...
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188s Setting up libmount1:s390x (2.39.3-9ubuntu2) ...
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188s Preparing to unpack .../libfdisk1_2.39.3-9ubuntu2_s390x.deb ...
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188s Preparing to unpack .../mount_2.39.3-9ubuntu2_s390x.deb ...
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188s Preparing to unpack .../dpkg_1.22.6ubuntu5_s390x.deb ...
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189s Setting up libpython3.12-minimal:s390x (3.12.2-4build3) ...
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190s Preparing to unpack .../0-bsdextrautils_2.39.3-9ubuntu2_s390x.deb ...
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190s Preparing to unpack .../5-libbpf1_1%3a1.3.0-2build1_s390x.deb ...
190s Unpacking libbpf1:s390x (1:1.3.0-2build1) over (1:1.3.0-2) ...
190s dpkg: libelf1:s390x: dependency problems, but removing anyway as you requested:
190s  linux-headers-6.8.0-11-generic depends on libelf1 (>= 0.144).
190s  iproute2 depends on libelf1 (>= 0.131).
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191s Removing libelf1:s390x (0.190-1) ...
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191s Preparing to unpack .../libtirpc-common_1.3.4+ds-1.1_all.deb ...
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191s Preparing to unpack .../lsof_4.95.0-1build2_s390x.deb ...
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191s dpkg: libtirpc3:s390x: dependency problems, but removing anyway as you requested:
191s  iproute2 depends on libtirpc3 (>= 1.0.2).
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191s Removing libtirpc3:s390x (1.3.4+ds-1build1) ...
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191s Preparing to unpack .../0-libtirpc3t64_1.3.4+ds-1.1_s390x.deb ...
191s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3 to /lib/s390x-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64'
191s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3.0.0 to /lib/s390x-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64'
191s Unpacking libtirpc3t64:s390x (1.3.4+ds-1.1) ...
191s Preparing to unpack .../1-iproute2_6.1.0-1ubuntu5_s390x.deb ...
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191s Preparing to unpack .../4-libnghttp2-14_1.59.0-1build1_s390x.deb ...
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191s Preparing to unpack .../5-libproc2-0_2%3a4.0.4-4ubuntu2_s390x.deb ...
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191s Setting up coreutils (9.4-3ubuntu3) ...
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191s Setting up util-linux (2.39.3-9ubuntu2) ...
192s fstrim.service is a disabled or a static unit not running, not starting it.
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192s Preparing to unpack .../multipath-tools_0.9.4-5ubuntu6_s390x.deb ...
192s Unpacking multipath-tools (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ...
192s dpkg: liburcu8:s390x: dependency problems, but removing anyway as you requested:
192s  xfsprogs depends on liburcu8 (>= 0.13.0).
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192s Removing liburcu8:s390x (0.14.0-3) ...
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192s Preparing to unpack .../liburcu8t64_0.14.0-3.1_s390x.deb ...
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192s Preparing to unpack .../liblocale-gettext-perl_1.07-6ubuntu4_s390x.deb ...
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192s Preparing to unpack .../uuid-runtime_2.39.3-9ubuntu2_s390x.deb ...
192s Unpacking uuid-runtime (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ...
192s Preparing to unpack .../libdebconfclient0_0.271ubuntu2_s390x.deb ...
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192s Setting up libdebconfclient0:s390x (0.271ubuntu2) ...
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193s Setting up libsemanage-common (3.5-1build4) ...
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193s Setting up libsemanage2:s390x (3.5-1build4) ...
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193s Selecting previously unselected package xdg-user-dirs.
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194s Unpacking apparmor (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ...
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194s Selecting previously unselected package manpages.
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194s Selecting previously unselected package libllvm18:s390x.
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195s Selecting previously unselected package libclang-cpp18.
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196s Selecting previously unselected package libbpfcc:s390x.
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196s Selecting previously unselected package python3-bpfcc.
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196s Selecting previously unselected package python3-netaddr.
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196s Selecting previously unselected package bpfcc-tools.
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196s Selecting previously unselected package libclang1-18.
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196s Selecting previously unselected package libdw1t64:s390x.
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197s Selecting previously unselected package bpftrace.
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197s Selecting previously unselected package fonts-dejavu-mono.
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197s Selecting previously unselected package libfreetype6:s390x.
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197s Selecting previously unselected package libdeflate0:s390x.
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197s Selecting previously unselected package libtiff6:s390x.
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198s Selecting previously unselected package linux-modules-6.8.0-20-generic.
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201s Selecting previously unselected package ubuntu-kernel-accessories.
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201s Setting up cryptsetup-bin (2:2.7.0-1ubuntu2) ...
202s Setting up pinentry-curses (1.2.1-3ubuntu4) ...
202s Setting up motd-news-config (13ubuntu8) ...
202s Setting up libtext-iconv-perl:s390x (1.7-8build2) ...
202s Setting up libtext-charwidth-perl:s390x (0.04-11build2) ...
202s Setting up libsharpyuv0:s390x (1.3.2-0.4build2) ...
202s Setting up liburcu8t64:s390x (0.14.0-3.1) ...
202s Setting up tcpdump (4.99.4-3ubuntu2) ...
202s Setting up libibverbs1:s390x (50.0-2build1) ...
202s Setting up systemd-sysv (255.4-1ubuntu5) ...
202s Setting up ubuntu-kernel-accessories (1.536build1) ...
202s Setting up libapparmor1:s390x (4.0.0-beta3-0ubuntu2) ...
202s Setting up libatm1t64:s390x (1:2.5.1-5.1) ...
202s Setting up libgdbm6t64:s390x (1.23-5.1) ...
202s Setting up bsdextrautils (2.39.3-9ubuntu2) ...
202s Setting up libxpm4:s390x (1:3.5.17-1build1) ...
202s Setting up libgdbm-compat4t64:s390x (1.23-5.1) ...
202s Setting up xdg-user-dirs (0.18-1) ...
202s Setting up ibverbs-providers:s390x (50.0-2build1) ...
202s Setting up linux-headers-6.8.0-20 (6.8.0-20.20) ...
202s Setting up libmagic-mgc (1:5.45-3) ...
202s Setting up gawk (1:5.2.1-2build2) ...
202s Setting up manpages (6.05.01-1) ...
202s Setting up libtirpc-common (1.3.4+ds-1.1) ...
202s Setting up libbrotli1:s390x (1.1.0-2build1) ...
202s Setting up libsqlite3-0:s390x (3.45.1-1ubuntu1) ...
202s Setting up libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) ...
202s Setting up libuv1t64:s390x (1.48.0-1.1) ...
202s Setting up libmagic1t64:s390x (1:5.45-3) ...
202s Setting up rsyslog (8.2312.0-3ubuntu7) ...
202s info: The user `syslog' is already a member of `adm'.
203s Setting up libpsl5t64:s390x (0.21.2-1.1) ...
203s Setting up libnghttp2-14:s390x (1.59.0-1build1) ...
203s Setting up libdeflate0:s390x (1.19-1) ...
203s Setting up linux-libc-dev:s390x (6.8.0-20.20) ...
203s Setting up libreiserfscore0t64 (1:3.6.27-7.1) ...
203s Setting up libnss-systemd:s390x (255.4-1ubuntu5) ...
203s Setting up libparted2t64:s390x (3.6-3.1build2) ...
203s Setting up krb5-locales (1.20.1-6ubuntu1) ...
203s Setting up file (1:5.45-3) ...
203s Setting up kmod (31+20240202-2ubuntu4) ...
203s Setting up lshw (02.19.git.2021.06.19.996aaad9c7-2build2) ...
203s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu6) ...
203s Setting up libprotobuf-c1:s390x (1.4.1-1ubuntu3) ...
203s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ...
203s Setting up xxd (2:9.1.0016-1ubuntu6) ...
203s Setting up libelf1t64:s390x (0.190-1.1build2) ...
203s Setting up libkrb5support0:s390x (1.20.1-6ubuntu1) ...
203s Setting up libdw1t64:s390x (0.190-1.1build2) ...
203s Setting up linux-headers-6.8.0-20-generic (6.8.0-20.20) ...
203s Setting up eject (2.39.3-9ubuntu2) ...
203s Setting up apparmor (4.0.0-beta3-0ubuntu2) ...
203s Installing new version of config file /etc/apparmor.d/abstractions/authentication ...
203s Installing new version of config file /etc/apparmor.d/abstractions/crypto ...
203s Installing new version of config file /etc/apparmor.d/abstractions/kde-open5 ...
203s Installing new version of config file /etc/apparmor.d/abstractions/openssl ...
203s Installing new version of config file /etc/apparmor.d/code ...
203s Installing new version of config file /etc/apparmor.d/firefox ...
204s Reloading AppArmor profiles 
204s Setting up libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ...
204s No schema files found: doing nothing.
204s Setting up libglib2.0-data (2.79.3-3ubuntu5) ...
204s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
204s Setting up vim-common (2:9.1.0016-1ubuntu6) ...
204s Setting up libqrtr-glib0:s390x (1.2.2-1ubuntu3) ...
204s Setting up libslang2:s390x (2.3.3-3build1) ...
204s Setting up libnvme1t64 (1.8-3) ...
204s Setting up mtr-tiny (0.95-1.1build1) ...
204s Setting up gnupg-l10n (2.4.4-2ubuntu15) ...
205s Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) ...
205s Setting up libdbus-1-3:s390x (1.14.10-4ubuntu2) ...
205s Setting up xz-utils (5.6.0-0.2) ...
205s Setting up perl-modules-5.38 (5.38.2-3.2) ...
205s Setting up libproc2-0:s390x (2:4.0.4-4ubuntu2) ...
205s Setting up libblockdev-utils3:s390x (3.1.0-1build1) ...
205s Setting up fonts-dejavu-mono (2.37-8) ...
205s Setting up libpng16-16t64:s390x (1.6.43-3) ...
205s Setting up systemd-timesyncd (255.4-1ubuntu5) ...
205s Setting up libevent-core-2.1-7:s390x (2.1.12-stable-9build1) ...
205s Setting up udev (255.4-1ubuntu5) ...
206s Setting up libss2:s390x (1.47.0-2.4~exp1ubuntu2) ...
206s Setting up usb.ids (2024.03.18-1) ...
206s Setting up sudo (1.9.15p5-3ubuntu3) ...
206s Setting up fonts-dejavu-core (2.37-8) ...
206s Setting up dhcpcd-base (1:10.0.6-1ubuntu2) ...
206s Setting up gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) ...
206s Setting up libk5crypto3:s390x (1.20.1-6ubuntu1) ...
206s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ...
206s Setting up logsave (1.47.0-2.4~exp1ubuntu2) ...
206s Setting up libwebp7:s390x (1.3.2-0.4build2) ...
206s Setting up libfdisk1:s390x (2.39.3-9ubuntu2) ...
206s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-6) ...
206s Setting up libblockdev-nvme3:s390x (3.1.0-1build1) ...
206s Setting up libblockdev-fs3:s390x (3.1.0-1build1) ...
206s Setting up libaio1t64:s390x (0.3.113-6) ...
206s Setting up python-apt-common (2.7.7) ...
206s Setting up mount (2.39.3-9ubuntu2) ...
206s Setting up uuid-runtime (2.39.3-9ubuntu2) ...
207s uuidd.service is a disabled or a static unit not running, not starting it.
207s Setting up libmm-glib0:s390x (1.23.4-0ubuntu1) ...
207s Setting up groff-base (1.23.0-3build1) ...
207s Setting up libcrypt-dev:s390x (1:4.4.36-4) ...
207s Setting up libplymouth5:s390x (24.004.60-1ubuntu6) ...
207s Setting up dbus-session-bus-common (1.14.10-4ubuntu2) ...
207s Setting up kpartx (0.9.4-5ubuntu6) ...
207s Setting up procps (2:4.0.4-4ubuntu2) ...
207s Setting up gpgconf (2.4.4-2ubuntu15) ...
207s Setting up libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) ...
207s Setting up libjson-glib-1.0-common (1.8.0-2build1) ...
207s Setting up libkrb5-3:s390x (1.20.1-6ubuntu1) ...
207s Setting up libpython3.11-minimal:s390x (3.11.8-1build4) ...
207s Setting up libperl5.38t64:s390x (5.38.2-3.2) ...
207s Setting up tnftp (20230507-2build1) ...
207s Setting up dbus-system-bus-common (1.14.10-4ubuntu2) ...
207s Setting up libfido2-1:s390x (1.14.0-1build1) ...
207s Setting up libc-dev-bin (2.39-0ubuntu6) ...
207s Setting up openssl (3.0.13-0ubuntu2) ...
207s Setting up linux-modules-6.8.0-20-generic (6.8.0-20.20) ...
208s Setting up readline-common (8.2-4) ...
208s Setting up libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) ...
208s Setting up libxmuu1:s390x (2:1.1.3-3build1) ...
208s Setting up dbus-bin (1.14.10-4ubuntu2) ...
208s Setting up info (7.1-3build1) ...
208s Setting up liblocale-gettext-perl (1.07-6ubuntu4) ...
208s Setting up gpg (2.4.4-2ubuntu15) ...
208s Setting up libgudev-1.0-0:s390x (1:238-3ubuntu2) ...
208s Setting up libpolkit-gobject-1-0:s390x (124-1ubuntu1) ...
208s Setting up libbpf1:s390x (1:1.3.0-2build1) ...
208s Setting up libmbim-glib4:s390x (1.31.2-0ubuntu2) ...
208s Setting up rsync (3.2.7-1build1) ...
208s rsync.service is a disabled or a static unit not running, not starting it.
208s Setting up libudisks2-0:s390x (2.10.1-6) ...
208s Setting up bolt (0.9.6-2build1) ...
209s bolt.service is a disabled or a static unit not running, not starting it.
209s Setting up s390-tools-data (2.31.0-0ubuntu3) ...
209s Setting up libllvm18:s390x (1:18.1.2-1ubuntu2) ...
209s Setting up gnupg-utils (2.4.4-2ubuntu15) ...
209s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
209s Setting up python3.11-minimal (3.11.8-1build4) ...
210s Setting up libclang1-18 (1:18.1.2-1ubuntu2) ...
210s Setting up manpages-dev (6.05.01-1) ...
210s Setting up linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ...
210s Setting up apt-utils (2.7.14) ...
210s Setting up gpg-agent (2.4.4-2ubuntu15) ...
211s Setting up libpython3.12-stdlib:s390x (3.12.2-4build3) ...
211s Setting up libblockdev-mdraid3:s390x (3.1.0-1build1) ...
211s Setting up wget (1.21.4-1ubuntu2) ...
211s Setting up linux-image-6.8.0-20-generic (6.8.0-20.20) ...
211s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-20-generic
211s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-20-generic
211s Setting up libblockdev-swap3:s390x (3.1.0-1build1) ...
211s Setting up plymouth (24.004.60-1ubuntu6) ...
211s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic
211s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
215s Not invoking zipl: initrd doesn't exist yet
215s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
215s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
215s Setting up fontconfig-config (2.15.0-1.1ubuntu1) ...
215s Setting up libxmlb2:s390x (0.3.15-1build1) ...
215s Setting up btrfs-progs (6.6.3-1.1build1) ...
215s Setting up libpython3.11-stdlib:s390x (3.11.8-1build4) ...
215s Setting up python3.12 (3.12.2-4build3) ...
217s Setting up libblockdev-loop3:s390x (3.1.0-1build1) ...
217s Setting up gpgsm (2.4.4-2ubuntu15) ...
217s Setting up inetutils-telnet (2:2.5-3ubuntu3) ...
217s Setting up parted (3.6-3.1build2) ...
217s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu2) ...
217s update-initramfs: deferring update (trigger activated)
217s e2scrub_all.service is a disabled or a static unit not running, not starting it.
217s Setting up linux-headers-generic (6.8.0-20.20+1) ...
217s Setting up dbus-daemon (1.14.10-4ubuntu2) ...
217s Setting up libmbim-proxy (1.31.2-0ubuntu2) ...
217s Setting up vim-tiny (2:9.1.0016-1ubuntu6) ...
217s Setting up libnetplan1:s390x (1.0-1) ...
217s Setting up man-db (2.12.0-3build4) ...
218s Updating database of manual pages ...
219s man-db.service is a disabled or a static unit not running, not starting it.
219s Setting up libblockdev3:s390x (3.1.0-1build1) ...
219s Setting up fdisk (2.39.3-9ubuntu2) ...
219s Setting up multipath-tools (0.9.4-5ubuntu6) ...
220s Setting up libjson-glib-1.0-0:s390x (1.8.0-2build1) ...
220s Setting up libblockdev-part3:s390x (3.1.0-1build1) ...
220s Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) ...
220s Setting up hwdata (0.379-1) ...
220s Setting up perl (5.38.2-3.2) ...
220s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) ...
220s update-initramfs: deferring update (trigger activated)
220s Setting up libfreetype6:s390x (2.13.2+dfsg-1build2) ...
220s Setting up gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) ...
220s Setting up dbus (1.14.10-4ubuntu2) ...
220s A reboot is required to replace the running dbus-daemon.
220s Please reboot the system when convenient.
221s Setting up shared-mime-info (2.4-1build1) ...
222s Setting up libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) ...
222s Setting up ftp (20230507-2build1) ...
222s Setting up keyboxd (2.4.4-2ubuntu15) ...
222s Setting up libdpkg-perl (1.22.6ubuntu5) ...
222s Setting up libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) ...
222s Setting up libssh-4:s390x (0.10.6-2build1) ...
222s Setting up ieee-data (20220827.1) ...
222s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu1) ...
222s Setting up libpam-systemd:s390x (255.4-1ubuntu5) ...
222s Setting up libpolkit-agent-1-0:s390x (124-1ubuntu1) ...
222s Setting up libc6-dev:s390x (2.39-0ubuntu6) ...
222s Setting up libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ...
222s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu1) ...
222s Setting up linux-image-virtual (6.8.0-20.20+1) ...
222s Setting up netplan-generator (1.0-1) ...
222s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
222s Setting up libclang-cpp18 (1:18.1.2-1ubuntu2) ...
222s Setting up libbpfcc:s390x (0.29.1+ds-1ubuntu4) ...
222s Setting up linux-tools-common (6.8.0-20.20) ...
222s Setting up libarchive13t64:s390x (3.7.2-1.1ubuntu2) ...
222s Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) ...
222s Setting up libpython3-stdlib:s390x (3.12.2-0ubuntu1) ...
222s Setting up systemd-resolved (255.4-1ubuntu5) ...
222s Setting up python3.11 (3.11.8-1build4) ...
223s Setting up linux-image-generic (6.8.0-20.20+1) ...
223s Setting up telnet (0.17+2.5-3ubuntu3) ...
223s Setting up linux-headers-virtual (6.8.0-20.20+1) ...
223s Setting up linux-generic (6.8.0-20.20+1) ...
223s Setting up libcurl4t64:s390x (8.5.0-2ubuntu8) ...
223s Setting up bpftrace (0.20.2-1ubuntu1) ...
224s Setting up bind9-libs:s390x (1:9.18.24-0ubuntu3) ...
224s Setting up libtirpc3t64:s390x (1.3.4+ds-1.1) ...
224s Setting up e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) ...
224s Setting up iproute2 (6.1.0-1ubuntu5) ...
224s Setting up openssh-client (1:9.6p1-3ubuntu11) ...
224s Setting up libgusb2:s390x (0.4.8-1build1) ...
224s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ...
224s Setting up libqmi-glib5:s390x (1.35.2-0ubuntu1) ...
224s Setting up linux-tools-6.8.0-20 (6.8.0-20.20) ...
224s Setting up python3 (3.12.2-0ubuntu1) ...
224s Setting up libjcat1:s390x (0.2.0-2build2) ...
224s Setting up dpkg-dev (1.22.6ubuntu5) ...
224s Setting up linux-virtual (6.8.0-20.20+1) ...
224s Setting up dirmngr (2.4.4-2ubuntu15) ...
224s Setting up dbus-user-session (1.14.10-4ubuntu2) ...
224s Setting up linux-tools-6.8.0-20-generic (6.8.0-20.20) ...
224s Setting up python3-cryptography (41.0.7-4build2) ...
224s Setting up python3-gi (3.47.0-3build1) ...
225s Setting up libgd3:s390x (2.3.3-9ubuntu3) ...
225s Setting up python3-typing-extensions (4.10.0-1) ...
225s Setting up lsof (4.95.0-1build2) ...
225s Setting up python3-pyrsistent:s390x (0.20.0-1build1) ...
225s Setting up python3-netaddr (0.8.0-2ubuntu1) ...
225s Setting up libnsl2:s390x (1.3.0-3build2) ...
225s Setting up gnupg (2.4.4-2ubuntu15) ...
225s Setting up python3-netplan (1.0-1) ...
225s Setting up curl (8.5.0-2ubuntu8) ...
225s Setting up libvolume-key1:s390x (0.3.12-7build1) ...
225s Setting up bind9-host (1:9.18.24-0ubuntu3) ...
225s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ...
225s Setting up python3-bpfcc (0.29.1+ds-1ubuntu4) ...
226s Setting up libc-devtools (2.39-0ubuntu6) ...
226s Setting up python3-pkg-resources (68.1.2-2ubuntu1) ...
226s Setting up python3-distutils (3.12.2-3ubuntu1.1) ...
226s python3.12: can't get files for byte-compilation
226s Setting up openssh-sftp-server (1:9.6p1-3ubuntu11) ...
226s Setting up python3-dbus (1.3.2-5build2) ...
226s Setting up python3-setuptools (68.1.2-2ubuntu1) ...
227s Setting up gpg-wks-client (2.4.4-2ubuntu15) ...
227s Setting up openssh-server (1:9.6p1-3ubuntu11) ...
227s Replacing config file /etc/ssh/sshd_config with new version
229s Created symlink /etc/systemd/system/ssh.service.requires/ssh.socket → /usr/lib/systemd/system/ssh.socket.

230s Setting up libblockdev-crypto3:s390x (3.1.0-1build1) ...
230s Setting up python3-gdbm:s390x (3.12.2-3ubuntu1.1) ...
230s Setting up python3-apt (2.7.7) ...
230s Setting up libfwupd2:s390x (1.9.15-2) ...
230s Setting up python3-yaml (6.0.1-2build1) ...
230s Setting up libqmi-proxy (1.35.2-0ubuntu1) ...
230s Setting up netplan.io (1.0-1) ...
230s Setting up bpfcc-tools (0.29.1+ds-1ubuntu4) ...
230s Setting up bind9-dnsutils (1:9.18.24-0ubuntu3) ...
230s Setting up ubuntu-pro-client (31.2.2) ...
232s Setting up fwupd (1.9.15-2) ...
232s fwupd-offline-update.service is a disabled or a static unit not running, not starting it.
232s fwupd-refresh.service is a disabled or a static unit not running, not starting it.
232s Setting up ubuntu-pro-client-l10n (31.2.2) ...
232s Setting up udisks2 (2.10.1-6) ...
233s Processing triggers for libc-bin (2.39-0ubuntu6) ...
233s Processing triggers for ufw (0.36.2-5) ...
234s Processing triggers for debianutils (5.17) ...
234s Processing triggers for install-info (7.1-3build1) ...
234s Processing triggers for initramfs-tools (0.142ubuntu23) ...
234s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic
234s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
237s Not invoking zipl: initrd doesn't exist yet
237s Processing triggers for linux-image-6.8.0-20-generic (6.8.0-20.20) ...
237s /etc/kernel/postinst.d/initramfs-tools:
237s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic
237s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
240s Using config file '/etc/zipl.conf'
240s Building bootmap in '/boot'
240s Adding IPL section 'ubuntu' (default)
240s Preparing boot device for LD-IPL: vda (0000).
240s Done.
240s /etc/kernel/postinst.d/zz-zipl:
240s Using config file '/etc/zipl.conf'
240s Building bootmap in '/boot'
240s Adding IPL section 'ubuntu' (default)
240s Preparing boot device for LD-IPL: vda (0000).
240s Done.
242s Reading package lists...
242s Building dependency tree...
242s Reading state information...
242s The following packages will be REMOVED:
242s   libaio1* libnetplan0* python3-distutils* python3-lib2to3*
242s 0 upgraded, 0 newly installed, 4 to remove and 1 not upgraded.
242s After this operation, 1445 kB disk space will be freed.
242s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81786 files and directories currently installed.)
242s Removing libaio1:s390x (0.3.113-5) ...
242s Removing libnetplan0:s390x (0.107.1-3) ...
242s Removing python3-distutils (3.12.2-3ubuntu1.1) ...
243s Removing python3-lib2to3 (3.12.2-3ubuntu1.1) ...
243s Processing triggers for libc-bin (2.39-0ubuntu6) ...
243s autopkgtest [01:12:38]: rebooting testbed after setup commands that affected boot
271s autopkgtest [01:13:06]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP Mon Mar 18 10:49:25 UTC 2024
275s autopkgtest [01:13:10]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-parallelly
277s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-cran-parallelly 1.37.1-1 (dsc) [2109 B]
277s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-cran-parallelly 1.37.1-1 (tar) [146 kB]
277s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-cran-parallelly 1.37.1-1 (diff) [2812 B]
277s gpgv: Signature made Fri Mar  1 00:08:44 2024 UTC
277s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
277s gpgv:                issuer "plessy@debian.org"
277s gpgv: Can't check signature: No public key
277s dpkg-source: warning: cannot verify inline signature for ./r-cran-parallelly_1.37.1-1.dsc: no acceptable signature found
277s autopkgtest [01:13:12]: testing package r-cran-parallelly version 1.37.1-1
277s autopkgtest [01:13:12]: build not needed
279s autopkgtest [01:13:14]: test run-unit-test: preparing testbed
280s Reading package lists...
281s Building dependency tree...
281s Reading state information...
281s Starting pkgProblemResolver with broken count: 0
281s Starting 2 pkgProblemResolver with broken count: 0
281s Done
281s The following additional packages will be installed:
281s   fontconfig libblas3 libcairo2 libdatrie1 libgfortran5 libgomp1
281s   libgraphite2-3 libharfbuzz0b libice6 liblapack3 libpango-1.0-0
281s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
281s   libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0
281s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-parallelly unzip
281s   x11-common xdg-utils zip
281s Suggested packages:
281s   tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html
281s Recommended packages:
281s   r-recommended r-base-dev r-doc-html libfile-mimeinfo-perl libnet-dbus-perl
281s   libx11-protocol-perl x11-utils x11-xserver-utils
281s The following NEW packages will be installed:
281s   autopkgtest-satdep fontconfig libblas3 libcairo2 libdatrie1 libgfortran5
281s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 liblapack3 libpango-1.0-0
281s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0
281s   libsm6 libtcl8.6 libthai-data libthai0 libtk8.6 libxcb-render0 libxcb-shm0
281s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-parallelly unzip
281s   x11-common xdg-utils zip
281s 0 upgraded, 34 newly installed, 0 to remove and 1 not upgraded.
281s Need to get 36.2 MB/36.2 MB of archives.
281s After this operation, 71.2 MB of additional disk space will be used.
281s Get:1 /tmp/autopkgtest.7MbdOA/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B]
281s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1.1ubuntu1 [191 kB]
282s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB]
282s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB]
282s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB]
282s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B]
282s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB]
282s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcairo2 s390x 1.18.0-1ubuntu1 [589 kB]
282s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB]
282s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240315-1ubuntu1 [600 kB]
283s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240315-1ubuntu1 [151 kB]
283s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB]
283s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libharfbuzz0b s390x 8.3.0-2build1 [515 kB]
283s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB]
283s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB]
283s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB]
284s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB]
284s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB]
284s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpango-1.0-0 s390x 1.52.1+ds-1 [242 kB]
284s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangoft2-1.0-0 s390x 1.52.1+ds-1 [44.2 kB]
284s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpangocairo-1.0-0 s390x 1.52.1+ds-1 [28.7 kB]
284s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB]
284s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B]
284s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB]
284s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtcl8.6 s390x 8.6.14+dfsg-1 [1037 kB]
285s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB]
285s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B]
285s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.14-1 [833 kB]
285s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxt6t64 s390x 1:1.2.1-1.2 [184 kB]
285s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB]
285s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB]
285s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
286s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-base-core s390x 4.3.3-2build1 [27.1 MB]
298s Get:34 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-parallelly s390x 1.37.1-1 [365 kB]
298s Preconfiguring packages ...
298s Fetched 36.2 MB in 17s (2174 kB/s)
298s Selecting previously unselected package fontconfig.
298s (Reading database ... 
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298s Preparing to unpack .../00-fontconfig_2.15.0-1.1ubuntu1_s390x.deb ...
298s Unpacking fontconfig (2.15.0-1.1ubuntu1) ...
298s Selecting previously unselected package libblas3:s390x.
298s Preparing to unpack .../01-libblas3_3.12.0-3_s390x.deb ...
298s Unpacking libblas3:s390x (3.12.0-3) ...
298s Selecting previously unselected package libpixman-1-0:s390x.
298s Preparing to unpack .../02-libpixman-1-0_0.42.2-1_s390x.deb ...
298s Unpacking libpixman-1-0:s390x (0.42.2-1) ...
298s Selecting previously unselected package libxcb-render0:s390x.
298s Preparing to unpack .../03-libxcb-render0_1.15-1_s390x.deb ...
298s Unpacking libxcb-render0:s390x (1.15-1) ...
298s Selecting previously unselected package libxcb-shm0:s390x.
298s Preparing to unpack .../04-libxcb-shm0_1.15-1_s390x.deb ...
298s Unpacking libxcb-shm0:s390x (1.15-1) ...
298s Selecting previously unselected package libxrender1:s390x.
298s Preparing to unpack .../05-libxrender1_1%3a0.9.10-1.1_s390x.deb ...
298s Unpacking libxrender1:s390x (1:0.9.10-1.1) ...
298s Selecting previously unselected package libcairo2:s390x.
298s Preparing to unpack .../06-libcairo2_1.18.0-1ubuntu1_s390x.deb ...
298s Unpacking libcairo2:s390x (1.18.0-1ubuntu1) ...
298s Selecting previously unselected package libdatrie1:s390x.
298s Preparing to unpack .../07-libdatrie1_0.2.13-3_s390x.deb ...
298s Unpacking libdatrie1:s390x (0.2.13-3) ...
298s Selecting previously unselected package libgfortran5:s390x.
298s Preparing to unpack .../08-libgfortran5_14-20240315-1ubuntu1_s390x.deb ...
298s Unpacking libgfortran5:s390x (14-20240315-1ubuntu1) ...
299s Selecting previously unselected package libgomp1:s390x.
299s Preparing to unpack .../09-libgomp1_14-20240315-1ubuntu1_s390x.deb ...
299s Unpacking libgomp1:s390x (14-20240315-1ubuntu1) ...
299s Selecting previously unselected package libgraphite2-3:s390x.
299s Preparing to unpack .../10-libgraphite2-3_1.3.14-2_s390x.deb ...
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299s Selecting previously unselected package libharfbuzz0b:s390x.
299s Preparing to unpack .../11-libharfbuzz0b_8.3.0-2build1_s390x.deb ...
299s Unpacking libharfbuzz0b:s390x (8.3.0-2build1) ...
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299s Selecting previously unselected package libice6:s390x.
299s Preparing to unpack .../13-libice6_2%3a1.0.10-1build2_s390x.deb ...
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299s Selecting previously unselected package libpango-1.0-0:s390x.
299s Preparing to unpack .../17-libpango-1.0-0_1.52.1+ds-1_s390x.deb ...
299s Unpacking libpango-1.0-0:s390x (1.52.1+ds-1) ...
299s Selecting previously unselected package libpangoft2-1.0-0:s390x.
299s Preparing to unpack .../18-libpangoft2-1.0-0_1.52.1+ds-1_s390x.deb ...
299s Unpacking libpangoft2-1.0-0:s390x (1.52.1+ds-1) ...
299s Selecting previously unselected package libpangocairo-1.0-0:s390x.
299s Preparing to unpack .../19-libpangocairo-1.0-0_1.52.1+ds-1_s390x.deb ...
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299s Selecting previously unselected package libpaper1:s390x.
299s Preparing to unpack .../20-libpaper1_1.1.29_s390x.deb ...
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299s Unpacking libpaper-utils (1.1.29) ...
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299s Unpacking libsm6:s390x (2:1.2.3-1build2) ...
299s Selecting previously unselected package libtcl8.6:s390x.
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299s Unpacking libtcl8.6:s390x (8.6.14+dfsg-1) ...
299s Selecting previously unselected package libxft2:s390x.
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299s Unpacking libxt6t64:s390x (1:1.2.1-1.2) ...
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299s Selecting previously unselected package unzip.
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299s Unpacking unzip (6.0-28ubuntu3) ...
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299s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
299s Selecting previously unselected package r-base-core.
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299s Unpacking r-cran-parallelly (1.37.1-1) ...
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299s Unpacking autopkgtest-satdep (0) ...
300s Setting up libgraphite2-3:s390x (1.3.14-2) ...
300s Setting up libpixman-1-0:s390x (0.42.2-1) ...
300s Setting up libpaper1:s390x (1.1.29) ...
300s 
300s Creating config file /etc/papersize with new version
300s Setting up fontconfig (2.15.0-1.1ubuntu1) ...
302s Regenerating fonts cache... done.
302s Setting up libxrender1:s390x (1:0.9.10-1.1) ...
302s Setting up libdatrie1:s390x (0.2.13-3) ...
302s Setting up libxcb-render0:s390x (1.15-1) ...
302s Setting up unzip (6.0-28ubuntu3) ...
302s Setting up x11-common (1:7.7+23ubuntu2) ...
302s Setting up libxcb-shm0:s390x (1.15-1) ...
302s Setting up libpaper-utils (1.1.29) ...
302s Setting up libgomp1:s390x (14-20240315-1ubuntu1) ...
302s Setting up libcairo2:s390x (1.18.0-1ubuntu1) ...
302s Setting up zip (3.0-13) ...
302s Setting up libblas3:s390x (3.12.0-3) ...
302s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
302s Setting up libtcl8.6:s390x (8.6.14+dfsg-1) ...
302s Setting up libgfortran5:s390x (14-20240315-1ubuntu1) ...
302s Setting up libharfbuzz0b:s390x (8.3.0-2build1) ...
302s Setting up libthai-data (0.1.29-2) ...
302s Setting up libxss1:s390x (1:1.2.3-1build2) ...
302s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
302s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
302s Setting up libice6:s390x (2:1.0.10-1build2) ...
302s Setting up liblapack3:s390x (3.12.0-3) ...
302s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
302s Setting up libxft2:s390x (2.3.6-1) ...
302s Setting up libtk8.6:s390x (8.6.14-1) ...
302s Setting up libthai0:s390x (0.1.29-2) ...
302s Setting up libsm6:s390x (2:1.2.3-1build2) ...
302s Setting up libpango-1.0-0:s390x (1.52.1+ds-1) ...
302s Setting up libxt6t64:s390x (1:1.2.1-1.2) ...
302s Setting up libpangoft2-1.0-0:s390x (1.52.1+ds-1) ...
302s Setting up libpangocairo-1.0-0:s390x (1.52.1+ds-1) ...
302s Setting up r-base-core (4.3.3-2build1) ...
302s 
302s Creating config file /etc/R/Renviron with new version
302s Setting up r-cran-parallelly (1.37.1-1) ...
302s Setting up autopkgtest-satdep (0) ...
302s Processing triggers for man-db (2.12.0-3build4) ...
303s Processing triggers for install-info (7.1-3build1) ...
303s Processing triggers for libc-bin (2.39-0ubuntu6) ...
306s (Reading database ... 83436 files and directories currently installed.)
306s Removing autopkgtest-satdep (0) ...
307s autopkgtest [01:13:42]: test run-unit-test: [-----------------------
307s BEGIN TEST as.cluster.R
307s 
307s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
307s Copyright (C) 2024 The R Foundation for Statistical Computing
307s Platform: s390x-ibm-linux-gnu (64-bit)
307s 
307s R is free software and comes with ABSOLUTELY NO WARRANTY.
307s You are welcome to redistribute it under certain conditions.
307s Type 'license()' or 'licence()' for distribution details.
307s 
307s R is a collaborative project with many contributors.
307s Type 'contributors()' for more information and
307s 'citation()' on how to cite R or R packages in publications.
307s 
307s Type 'demo()' for some demos, 'help()' for on-line help, or
307s 'help.start()' for an HTML browser interface to help.
307s Type 'q()' to quit R.
307s 
307s > source("incl/start.R")
307s > stopCluster <- parallel::stopCluster
307s > 
307s > message("*** cluster operations ...")
307s *** cluster operations ...
307s > 
307s > local({
307s +   cl0 <- makeClusterPSOCK(1L)
307s +   on.exit(stopCluster(cl0))
307s +   cl <- cl0
307s +   print(cl)
307s + 
307s +   message("*** cluster operations - as.cluster() ...")
307s +   cl1 <- as.cluster(cl)
307s +   print(cl1)
307s +   stopifnot(inherits(cl1, "cluster"), identical(cl1, cl))
307s + 
307s +   node <- cl[[1]]
307s +   print(node)
307s +   cl2 <- as.cluster(node)
307s +   stopifnot(inherits(cl2, "cluster"), length(cl2) == 1L,
307s +             identical(cl2[[1]], node))
307s + 
307s +   node <- cl[[1]]
307s +   print(node)
307s +   stopifnot(inherits(node, if (useXDR) "SOCKnode" else "SOCK0node"))
307s +   nodes <- list(node, node)
307s +   cl3 <- as.cluster(node)
307s +   print(cl3)
307s +   stopifnot(inherits(cl3, "cluster"), length(cl3) == 1L,
307s +             identical(cl3[[1]], node))
307s + 
307s +   cl4 <- as.cluster(nodes)
307s +   print(cl4)
307s +   stopifnot(inherits(cl4, "cluster"), length(cl4) == 2L,
307s +             identical(cl4[[1]], node), identical(cl4[[2]], node))
307s +   
307s +   message("*** cluster operations - as.cluster() ... DONE")
307s + 
307s +   message("*** cluster operations - c(...) ...")
307s +   cl2 <- makeClusterPSOCK("localhost")
307s +   on.exit(stopCluster(cl2), add = TRUE)
307s +   print(cl2)
307s +   
307s +   cl <- c(cl1, cl2)
307s +   print(cl)
307s + 
307s +   stopifnot(inherits(cl, "cluster"), length(cl) == 2L)
307s +   stopifnot(identical(cl[1], cl1),
307s +             identical(cl[2], cl2[1]))
307s +   message("*** cluster operations - c(...) ... DONE")
307s + })
307s [01:13:42.484] [local output] makeClusterPSOCK() ...
307s [01:13:42.515] [local output] Workers: [n = 1] ‘localhost’
307s [01:13:42.517] [local output] Base port: 11654
307s [01:13:42.517] [local output] Getting setup options for 1 cluster nodes ...
307s [01:13:42.517] [local output]  - Node 1 of 1 ...
307s [01:13:42.518] [local output] localMachine=TRUE => revtunnel=FALSE
307s 
307s [01:13:42.519] Testing if worker's PID can be inferred: ‘'/usr/lib/R/bin/Rscript' -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.778f1dced3.pid")), silent = TRUE)' -e 'file.exists("/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.778f1dced3.pid")'’
307s [01:13:42.716] - Possible to infer worker's PID: TRUE
307s [01:13:42.716] [local output] Rscript port: 11654
307s 
307s [01:13:42.717] [local output] Getting setup options for 1 cluster nodes ... done
307s [01:13:42.717] [local output]  - Parallel setup requested for some PSOCK nodes
307s [01:13:42.717] [local output] Setting up PSOCK nodes in parallel
307s [01:13:42.718] List of 36
307s [01:13:42.718]  $ worker          : chr "localhost"
307s [01:13:42.718]   ..- attr(*, "localhost")= logi TRUE
307s [01:13:42.718]  $ master          : chr "localhost"
307s [01:13:42.718]  $ port            : int 11654
307s [01:13:42.718]  $ connectTimeout  : num 120
307s [01:13:42.718]  $ timeout         : num 2592000
307s [01:13:42.718]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
307s [01:13:42.718]  $ homogeneous     : logi TRUE
307s [01:13:42.718]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
307s [01:13:42.718]  $ rscript_envs    : NULL
307s [01:13:42.718]  $ rscript_libs    : NULL
307s [01:13:42.718]  $ rscript_startup : NULL
307s [01:13:42.718]  $ rscript_sh      : chr "sh"
307s [01:13:42.718]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
307s [01:13:42.718]  $ methods         : logi TRUE
307s [01:13:42.718]  $ socketOptions   : chr "no-delay"
307s [01:13:42.718]  $ useXDR          : logi FALSE
307s [01:13:42.718]  $ outfile         : chr "/dev/null"
307s [01:13:42.718]  $ renice          : int NA
307s [01:13:42.718]  $ rshcmd          : NULL
307s [01:13:42.718]  $ user            : chr(0) 
307s [01:13:42.718]  $ revtunnel       : logi FALSE
307s [01:13:42.718]  $ rshlogfile      : NULL
307s [01:13:42.718]  $ rshopts         : chr(0) 
307s [01:13:42.718]  $ rank            : int 1
307s [01:13:42.718]  $ manual          : logi FALSE
307s [01:13:42.718]  $ dryrun          : logi FALSE
307s [01:13:42.718]  $ quiet           : logi FALSE
307s [01:13:42.718]  $ setup_strategy  : chr "parallel"
307s [01:13:42.718]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
307s [01:13:42.718]  $ pidfile         : chr "/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.778f1dced3.pid"
307s [01:13:42.718]  $ rshcmd_label    : NULL
307s [01:13:42.718]  $ rsh_call        : NULL
307s [01:13:42.718]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
307s [01:13:42.718]  $ localMachine    : logi TRUE
307s [01:13:42.718]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
307s [01:13:42.718]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
307s [01:13:42.718]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
307s [01:13:42.718]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
307s [01:13:42.718]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
307s [01:13:42.718]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
307s [01:13:42.718]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
307s [01:13:42.718]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
307s [01:13:42.718]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
307s [01:13:42.718]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
307s [01:13:42.718]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
307s [01:13:42.718]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
307s [01:13:42.718]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
307s [01:13:42.718]  $ arguments       :List of 28
307s [01:13:42.718]   ..$ worker          : chr "localhost"
307s [01:13:42.718]   ..$ master          : NULL
307s [01:13:42.718]   ..$ port            : int 11654
307s [01:13:42.718]   ..$ connectTimeout  : num 120
307s [01:13:42.718]   ..$ timeout         : num 2592000
307s [01:13:42.718]   ..$ rscript         : NULL
307s [01:13:42.718]   ..$ homogeneous     : NULL
307s [01:13:42.718]   ..$ rscript_args    : NULL
307s [01:13:42.718]   ..$ rscript_envs    : NULL
307s [01:13:42.718]   ..$ rscript_libs    : NULL
307s [01:13:42.718]   ..$ rscript_startup : NULL
307s [01:13:42.718]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
307s [01:13:42.718]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
307s [01:13:42.718]   ..$ methods         : logi TRUE
307s [01:13:42.718]   ..$ socketOptions   : chr "no-delay"
307s [01:13:42.718]   ..$ useXDR          : logi FALSE
307s [01:13:42.718]   ..$ outfile         : chr "/dev/null"
307s [01:13:42.718]   ..$ renice          : int NA
307s [01:13:42.718]   ..$ rshcmd          : NULL
307s [01:13:42.718]   ..$ user            : NULL
307s [01:13:42.718]   ..$ revtunnel       : logi NA
307s [01:13:42.718]   ..$ rshlogfile      : NULL
307s [01:13:42.718]   ..$ rshopts         : NULL
307s [01:13:42.718]   ..$ rank            : int 1
307s [01:13:42.718]   ..$ manual          : logi FALSE
307s [01:13:42.718]   ..$ dryrun          : logi FALSE
307s [01:13:42.718]   ..$ quiet           : logi FALSE
307s [01:13:42.718]   ..$ setup_strategy  : chr "parallel"
307s [01:13:42.718]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
307s [01:13:42.743] [local output] System call to launch all workers:
307s [01:13:42.743] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.778f1dced3.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11654 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
307s [01:13:42.743] [local output] Starting PSOCK main server
307s [01:13:42.750] [local output] Workers launched
307s [01:13:42.751] [local output] Waiting for workers to connect back
307s [01:13:42.751]  - [local output] 0 workers out of 1 ready
307s [01:13:42.944]  - [local output] 0 workers out of 1 ready
307s [01:13:42.944]  - [local output] 1 workers out of 1 ready
307s [01:13:42.944] [local output] Launching of workers completed
307s [01:13:42.944] [local output] Collecting session information from workers
307s [01:13:42.945] [local output]  - Worker #1 of 1
307s [01:13:42.945] [local output] makeClusterPSOCK() ... done
307s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
307s *** cluster operations - as.cluster() ...
307s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
307s RichSOCKnode of a socket cluster on local host 'localhost' with pid 1951 (R version 4.3.3 (2024-02-29), s390x-ibm-linux-gnu) using socket connection #4 ('<-localhost:11654')
307s RichSOCKnode of a socket cluster on local host 'localhost' with pid 1951 (R version 4.3.3 (2024-02-29), s390x-ibm-linux-gnu) using socket connection #4 ('<-localhost:11654')
307s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
307s Warning: The combined cluster contains 1 duplicated nodes
308s *** cluster operations - as.cluster() ... DONE
308s *** cluster operations - c(...) ...
308s [01:13:42.956] [local output] makeClusterPSOCK() ...
308s [01:13:42.957] [local output] Workers: [n = 1] ‘localhost’
308s Socket cluster with 2 nodes where 2 nodes are on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
308s [01:13:42.957] [local output] Base port: 11746
308s [01:13:42.957] [local output] Getting setup options for 1 cluster nodes ...
308s [01:13:42.957] [local output]  - Node 1 of 1 ...
308s [01:13:42.958] [local output] localMachine=TRUE => revtunnel=FALSE
308s 
308s [01:13:42.959] [local output] Rscript port: 11746
308s 
308s [01:13:42.959] [local output] Getting setup options for 1 cluster nodes ... done
308s [01:13:42.959] [local output]  - Parallel setup requested for some PSOCK nodes
308s [01:13:42.959] [local output] Setting up PSOCK nodes in parallel
308s [01:13:42.960] List of 36
308s [01:13:42.960]  $ worker          : chr "localhost"
308s [01:13:42.960]   ..- attr(*, "localhost")= logi TRUE
308s [01:13:42.960]  $ master          : chr "localhost"
308s [01:13:42.960]  $ port            : int 11746
308s [01:13:42.960]  $ connectTimeout  : num 120
308s [01:13:42.960]  $ timeout         : num 2592000
308s [01:13:42.960]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
308s [01:13:42.960]  $ homogeneous     : logi TRUE
308s [01:13:42.960]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
308s [01:13:42.960]  $ rscript_envs    : NULL
308s [01:13:42.960]  $ rscript_libs    : NULL
308s [01:13:42.960]  $ rscript_startup : NULL
308s [01:13:42.960]  $ rscript_sh      : chr "sh"
308s [01:13:42.960]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
308s [01:13:42.960]  $ methods         : logi TRUE
308s [01:13:42.960]  $ socketOptions   : chr "no-delay"
308s [01:13:42.960]  $ useXDR          : logi FALSE
308s [01:13:42.960]  $ outfile         : chr "/dev/null"
308s [01:13:42.960]  $ renice          : int NA
308s [01:13:42.960]  $ rshcmd          : NULL
308s [01:13:42.960]  $ user            : chr(0) 
308s [01:13:42.960]  $ revtunnel       : logi FALSE
308s [01:13:42.960]  $ rshlogfile      : NULL
308s [01:13:42.960]  $ rshopts         : chr(0) 
308s [01:13:42.960]  $ rank            : int 1
308s [01:13:42.960]  $ manual          : logi FALSE
308s [01:13:42.960]  $ dryrun          : logi FALSE
308s [01:13:42.960]  $ quiet           : logi FALSE
308s [01:13:42.960]  $ setup_strategy  : chr "parallel"
308s [01:13:42.960]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
308s [01:13:42.960]  $ pidfile         : chr "/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.7787b5b18a8.pid"
308s [01:13:42.960]  $ rshcmd_label    : NULL
308s [01:13:42.960]  $ rsh_call        : NULL
308s [01:13:42.960]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
308s [01:13:42.960]  $ localMachine    : logi TRUE
308s [01:13:42.960]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
308s [01:13:42.960]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
308s [01:13:42.960]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
308s [01:13:42.960]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
308s [01:13:42.960]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
308s [01:13:42.960]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
308s [01:13:42.960]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
308s [01:13:42.960]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
308s [01:13:42.960]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
308s [01:13:42.960]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
308s [01:13:42.960]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
308s [01:13:42.960]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
308s [01:13:42.960]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
308s [01:13:42.960]  $ arguments       :List of 28
308s [01:13:42.960]   ..$ worker          : chr "localhost"
308s [01:13:42.960]   ..$ master          : NULL
308s [01:13:42.960]   ..$ port            : int 11746
308s [01:13:42.960]   ..$ connectTimeout  : num 120
308s [01:13:42.960]   ..$ timeout         : num 2592000
308s [01:13:42.960]   ..$ rscript         : NULL
308s [01:13:42.960]   ..$ homogeneous     : NULL
308s [01:13:42.960]   ..$ rscript_args    : NULL
308s [01:13:42.960]   ..$ rscript_envs    : NULL
308s [01:13:42.960]   ..$ rscript_libs    : NULL
308s [01:13:42.960]   ..$ rscript_startup : NULL
308s [01:13:42.960]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
308s [01:13:42.960]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
308s [01:13:42.960]   ..$ methods         : logi TRUE
308s [01:13:42.960]   ..$ socketOptions   : chr "no-delay"
308s [01:13:42.960]   ..$ useXDR          : logi FALSE
308s [01:13:42.960]   ..$ outfile         : chr "/dev/null"
308s [01:13:42.960]   ..$ renice          : int NA
308s [01:13:42.960]   ..$ rshcmd          : NULL
308s [01:13:42.960]   ..$ user            : NULL
308s [01:13:42.960]   ..$ revtunnel       : logi NA
308s [01:13:42.960]   ..$ rshlogfile      : NULL
308s [01:13:42.960]   ..$ rshopts         : NULL
308s [01:13:42.960]   ..$ rank            : int 1
308s [01:13:42.960]   ..$ manual          : logi FALSE
308s [01:13:42.960]   ..$ dryrun          : logi FALSE
308s [01:13:42.960]   ..$ quiet           : logi FALSE
308s [01:13:42.960]   ..$ setup_strategy  : chr "parallel"
308s [01:13:42.960]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
308s [01:13:42.983] [local output] System call to launch all workers:
308s [01:13:42.983] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/Rtmpp27AOc/worker.rank=1.parallelly.parent=1912.7787b5b18a8.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11746 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
308s [01:13:42.983] [local output] Starting PSOCK main server
308s [01:13:42.985] [local output] Workers launched
308s [01:13:42.985] [local output] Waiting for workers to connect back
308s [01:13:42.986]  - [local output] 0 workers out of 1 ready
308s [01:13:43.199]  - [local output] 0 workers out of 1 ready
308s [01:13:43.200]  - [local output] 1 workers out of 1 ready
308s [01:13:43.200] [local output] Launching of workers completed
308s [01:13:43.201] [local output] Collecting session information from workers
308s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
308s [01:13:43.202] [local output]  - Worker #1 of 1
308s [01:13:43.202] [local output] makeClusterPSOCK() ... done
308s *** cluster operations - c(...) ... DONE
308s Socket cluster with 2 nodes where 2 nodes are on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
308s *** cluster operations - makeClusterPSOCK(remotes) ...
308s *** cluster operations - makeClusterPSOCK(remotes) ... DONE
308s *** cluster operations ... DONE
308s > 
308s > 
308s > message("*** cluster operations - makeClusterPSOCK(remotes) ...")
308s > 
308s > remotes <- Sys.getenv("R_PARALLELLY_TESTS_REMOTES", "")
308s > remotes <- gsub(" ", "", unlist(strsplit(remotes, split = ",")))
308s > remotes <- remotes[nzchar(remotes)]
308s > if (length(remotes) > 0) {
308s +   message("Remotes: ", paste(sQuote(remotes), collapse = ", "))
308s +   local({
308s +     cl <- makeClusterPSOCK(remotes, verbose = TRUE)
308s +     on.exit(stopCluster(cl))
308s +     print(cl)
308s +   })
308s + }
308s > 
308s > message("*** cluster operations - makeClusterPSOCK(remotes) ... DONE")
308s > 
308s > message("*** cluster operations ... DONE")
308s > 
308s > source("incl/end.R")
308s > 
308s BEGIN TEST availableCores.R
308s 
308s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
308s Copyright (C) 2024 The R Foundation for Statistical Computing
308s Platform: s390x-ibm-linux-gnu (64-bit)
308s 
308s R is free software and comes with ABSOLUTELY NO WARRANTY.
308s You are welcome to redistribute it under certain conditions.
308s Type 'license()' or 'licence()' for distribution details.
308s 
308s R is a collaborative project with many contributors.
308s Type 'contributors()' for more information and
308s 'citation()' on how to cite R or R packages in publications.
308s 
308s Type 'demo()' for some demos, 'help()' for on-line help, or
308s 'help.start()' for an HTML browser interface to help.
308s Type 'q()' to quit R.
308s 
308s > source("incl/start.R")
308s > 
308s > message("*** availableCores() ...")
308s > 
308s > ## detectCores() may return NA_integer_
308s *** availableCores() ...
308s > n <- parallel::detectCores()
308s > message(sprintf("detectCores() = %d", n))
308s > stopifnot(length(n) == 1, is.numeric(n))
308s > 
308s > ## Default
308s > n <- availableCores()
308s detectCores() = 1
308s > message(sprintf("availableCores() = %d", n))
308s > stopifnot(length(n) == 1, is.numeric(n), n >= 1)
308s > 
308s > ## Minimium of all known settings (default)
308s > print(availableCores(which = "min"))
308s availableCores() = 1
308s system 
308s      1 
308s > 
308s > ## Maximum of all known settings (should never be used)
308s > print(availableCores(which = "max"))
308s mc.cores 
308s        2 
308s > 
308s > ## All known settings
308s > print(availableCores(na.rm = FALSE, which = "all"))
308s                system        cgroups.cpuset      cgroups.cpuquota 
308s                     1                    NA                    NA 
308s      cgroups2.cpu.max                 nproc              mc.cores 
308s                    NA                     1                     2 
308s          BiocParallel _R_CHECK_LIMIT_CORES_          Bioconductor 
308s                    NA                    NA                    NA 
308s                   LSF                   PJM                   PBS 
308s                    NA                    NA                    NA 
308s                   SGE                 Slurm              fallback 
308s                    NA                    NA                    NA 
308s                custom 
308s                    NA 
308s > 
308s > ## System settings
308s > n <- availableCores(methods = "system")
308s > print(n)
308s system 
308s      1 
308s > stopifnot(length(n) == 1, is.numeric(n), is.finite(n), n >= 1)
308s > 
308s > ## Predefined ones for known cluster schedulers
308s > print(availableCores(methods = "PBS"))
308s current 
308s       1 
308s > print(availableCores(methods = "SGE"))
308s current 
308s       1 
308s > print(availableCores(methods = "Slurm"))
308s current 
308s       1 
308s > print(availableCores(methods = "LSF"))
308s current 
308s       1 
308s > 
308s > ## Any R options and system environment variable
308s > print(availableCores(methods = c("width", "FOO_BAR_ENV"),
308s +                      na.rm = FALSE, which = "all"))
308s       width FOO_BAR_ENV 
308s          80          NA 
308s > 
308s > ## Exception handling
308s > Sys.setenv("FOO_BAR_ENV" = "0")
308s > res <- try(availableCores(methods = "FOO_BAR_ENV"), silent = TRUE)
308s > stopifnot(inherits(res, "try-error"))
308s > 
308s > 
308s > ncores0 <- 42L
308s > 
308s > message("*** LSF ...")
308s > message(" - LSB_DJOB_NUMPROC")
308s > Sys.setenv(LSB_DJOB_NUMPROC = as.character(ncores0))
308s > ncores <- availableCores(methods = "LSF")
308s > print(ncores)
308s LSF 
308s  42 
308s > stopifnot(ncores == ncores0)
308s > message("*** LSF ... done")
308s > 
308s > message("*** PJM (Fujitsu Technical Computing Suite) ...")
308s > message(" - PJM_VNODE_CORE")
308s > Sys.setenv(PJM_VNODE_CORE = as.character(ncores0))
308s > ncores <- availableCores(methods = "PJM")
308s > print(ncores)
308s PJM 
308s  42 
308s > stopifnot(ncores == ncores0)
308s > Sys.unsetenv("PJM_VNODE_CORE")
308s > 
308s > [01:13:43.540] Detected invalid (zero or less) core settings: ‘FOO_BAR_ENV’ = 0
308s *** LSF ...
308s  - LSB_DJOB_NUMPROC
308s *** LSF ... done
308s *** PJM (Fujitsu Technical Computing Suite) ...
308s  - PJM_VNODE_CORE
308s message(" - PJM_PROC_BY_NODE")
308s > Sys.setenv(PJM_PROC_BY_NODE = as.character(ncores0))
308s > ncores <- availableCores(methods = "PJM")
308s > print(ncores)
308s PJM 
308s  42 
308s > stopifnot(ncores == ncores0)
308s > Sys.unsetenv("PJM_PROC_BY_NODE")
308s > message("*** PJM (Fujitsu Technical Computing Suite) ... done")
308s > 
308s > 
308s > message("*** Internal detectCores() ...")
308s >  - PJM_PROC_BY_NODE
308s *** PJM (Fujitsu Technical Computing Suite) ... done
308s *** Internal detectCores() ...
308s 
308s > ## Option 'parallelly.availableCores.system'
308s > 
308s > ## Reset internal cache
308s > env <- environment(parallelly:::detectCores)
308s > env$cache <- list()
308s > 
308s > options(parallelly.availableCores.system = 2L)
308s > n <- detectCores()
308s > print(n)
308s [1] 2
308s > stopifnot(is.integer(n), is.finite(n), n >= 1, n == 2L)
308s > options(parallelly.availableCores.system = NULL)
308s > 
308s > ## Reset
308s > env <- environment(parallelly:::detectCores)
308s > env$cache <- list()
308s > 
308s > n <- detectCores()
308s > print(n)
308s [1] 1
308s > stopifnot(is.integer(n), is.finite(n), n >= 1)
308s > 
308s > message("*** Internal detectCores() ... DONE")
308s > 
308s > 
308s > message("*** availableCores() ... DONE")
308s > 
308s > source("incl/end.R")
308s > 
308s *** Internal detectCores() ... DONE
308s *** availableCores() ... DONE
308s BEGIN TEST availableWorkers.R
308s 
308s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
308s Copyright (C) 2024 The R Foundation for Statistical Computing
308s Platform: s390x-ibm-linux-gnu (64-bit)
308s 
308s R is free software and comes with ABSOLUTELY NO WARRANTY.
308s You are welcome to redistribute it under certain conditions.
308s Type 'license()' or 'licence()' for distribution details.
308s 
308s R is a collaborative project with many contributors.
308s Type 'contributors()' for more information and
308s 'citation()' on how to cite R or R packages in publications.
308s 
308s Type 'demo()' for some demos, 'help()' for on-line help, or
308s 'help.start()' for an HTML browser interface to help.
308s Type 'q()' to quit R.
308s 
308s > source("incl/start.R")
308s > 
308s > message("*** availableWorkers() ...")
308s *** availableWorkers() ...
308s > 
308s > ## The default
308s > w <- availableWorkers()
308s > print(w)
308s [1] "localhost"
308s > stopifnot(is.character(w), length(w) >= 1)
308s > 
308s > ## Minimium of all known settings (default)
308s > print(availableWorkers(which = "min"))
308s [1] "localhost"
308s > 
308s > ## Maximum of all known settings (should never be used)
308s > print(availableWorkers(which = "max"))
308s [1] "localhost" "localhost"
308s > 
308s > ## All known settings
308s > print(availableWorkers(na.rm = FALSE, which = "all"))
308s $mc.cores
308s [1] "localhost" "localhost"
308s 
308s $BiocParallel
308s character(0)
308s 
308s $`_R_CHECK_LIMIT_CORES_`
308s character(0)
308s 
308s $Bioconductor
308s character(0)
308s 
308s $LSF
308s character(0)
308s 
308s $PJM
308s character(0)
308s 
308s $PBS
308s character(0)
308s 
308s $SGE
308s character(0)
308s 
308s $Slurm
308s character(0)
308s 
308s $custom
308s character(0)
308s 
308s $cgroups.cpuset
308s character(0)
308s 
308s $cgroups.cpuquota
308s character(0)
308s 
308s $cgroups2.cpu.max
308s character(0)
308s 
308s $nproc
308s [1] "localhost"
308s 
308s $system
308s [1] "localhost"
308s 
308s $fallback
308s character(0)
308s 
308s > 
308s > ## System settings
308s > w <- availableWorkers(methods = "system")
308s > print(w)
308s [1] "localhost"
308s > stopifnot(is.character(w), length(w) >= 1)
308s > 
308s > ## Predefined ones for known cluster schedulers
308s > print(availableWorkers(methods = "PBS"))
308s [1] "localhost"
308s > print(availableWorkers(methods = "SGE"))
308s [1] "localhost"
308s > print(availableWorkers(methods = "Slurm"))
308s [1] "localhost"
308s > print(availableWorkers(methods = "LSF"))
308s [1] "localhost"
308s > print(availableWorkers(methods = "PJM"))
308s [1] "localhost"
308s > 
308s > 
308s > message("*** HPC related ...")
308s > 
308s > *** HPC related ...
308s sge_expand_node_count_pairs <- parallelly:::sge_expand_node_count_pairs
308s > read_pbs_nodefile <- parallelly:::read_pbs_nodefile
308s > read_pjm_nodefile <- parallelly:::read_pjm_nodefile
308s > read_pe_hostfile <- parallelly:::read_pe_hostfile
308s > 
308s > workers0 <- c("n1", "n2", "n3", "n1", "n6", "n3", "n3", "n5")
308s > data0 <- as.data.frame(table(workers0), stringsAsFactors = FALSE)
308s > colnames(data0) <- c("node", "count")
308s > data0 <- data0[order(data0$node, data0$count), ]
308s > 
308s > 
308s > message("*** LSF ...")
308s > *** LSF ...
308s 
308s > Sys.setenv(LSB_HOSTS = paste(workers0, collapse = " "))
308s > workers <- availableWorkers(methods = "LSF")
308s > print(workers)
308s [1] "n1" "n2" "n3" "n1" "n6" "n3" "n3" "n5"
308s > stopifnot(length(workers) == length(workers0))
308s > 
308s > message("*** LSF ... done")
308s *** LSF ... done
308s > 
308s > 
308s > 
308s > message("*** read_pbs_nodefile() ...")
308s *** read_pbs_nodefile() ...
308s > 
308s > workers <- workers0
308s > pathname <- tempfile()
308s > writeLines(workers, con = pathname)
308s > 
308s > data <- read_pbs_nodefile(pathname)
308s > str(data)
308s 'data.frame':	8 obs. of  1 variable:
308s  $ node: chr  "n1" "n1" "n2" "n3" ...
308s > stopifnot(
308s +   c("node") %in% colnames(data),
308s +   is.character(data$node),
308s +   !anyNA(data$node),
308s +   nrow(data$node) == length(workers),
308s +   all(sort(data$node) == sort(workers))
308s + )
308s > 
308s > Sys.setenv(PBS_NODEFILE = pathname)
308s > Sys.setenv(PBS_NP = length(workers),
308s +            PBS_NUM_NODES = length(workers) / 2,
308s +            PBS_NUM_PPN = 2)
308s > workers <- availableWorkers(methods = "PBS")
308s > print(workers)
308s [1] "n1" "n1" "n2" "n3" "n3" "n3" "n5" "n6"
308s > stopifnot(length(workers) == length(workers0), all(workers == sort(workers0)))
308s > 
308s > Sys.setenv(PBS_NUM_PPN = 3)
308s > *** read_pbs_nodefile() ... DONE
308s *** read_pjm_nodefile() ...
308s - PJM_VNODE_CORE=1
308s - PJM_VNODE=5
308s - PJM_VNODE_CORE=2
308s - PJM_VNODE=1 (incompatible => warning)
308s - PJM_VNODE_CORE=2
308s Warning: Environment variable ‘PJM_VNODE’ does not agree with the number of hosts in file ‘PJM_O_NODEINF’: 1 != 5
308s - PJM_O_NODEINF = <non-existing-file>
308s res <- tryCatch({
308s +   workers <- availableWorkers(methods = "PBS")
308s + }, warning = identity)
308s > stopifnot(inherits(res, "warning"))
308s > 
308s > Sys.setenv(PBS_NP = length(workers) + 1)
308s > res <- tryCatch({
308s +   workers <- availableWorkers(methods = "PBS")
308s + }, warning = identity)
308s > stopifnot(inherits(res, "warning"))
308s > 
308s > ## Exceptions
308s > workersE <- c(workers, "n 3")
308s > pathname <- tempfile()
308s > writeLines(workersE, con = pathname)
308s > res <- tryCatch(read_pbs_nodefile(pathname), error = identity)
308s > print(res)
308s <simpleError: ‘!any(grepl("[[:space:]]", lines))’ is not TRUE>
308s > stopifnot(inherits(res, "error"))
308s > 
308s > Sys.setenv(PBS_NODEFILE = "<non-existing-file>")
308s > res <- tryCatch({
308s +   workers <- availableWorkers(methods = "PBS")
308s + }, warning = identity)
308s > stopifnot(inherits(res, "warning"))
308s > 
308s > message("*** read_pbs_nodefile() ... DONE")
308s > 
308s > 
308s > 
308s > 
308s > message("*** read_pjm_nodefile() ...")
308s > 
308s > workersT <- unique(workers0)
308s > pathname <- tempfile()
308s > writeLines(workersT, con = pathname)
308s > 
308s > data <- read_pjm_nodefile(pathname)
308s > str(data)
308s 'data.frame':	5 obs. of  1 variable:
308s  $ node: chr  "n1" "n2" "n3" "n5" ...
308s > stopifnot(
308s +   c("node") %in% colnames(data),
308s +   is.character(data$node),
308s +   !anyNA(data$node),
308s +   nrow(data$node) == length(workersT),
308s +   all(sort(data$node) == sort(workersT)),
308s +   identical(data$node, unique(data$node))
308s + )
308s > 
308s > Sys.setenv(PJM_O_NODEINF = pathname)
308s > 
308s > message("- PJM_VNODE_CORE=1")
308s > Sys.setenv(PJM_VNODE_CORE = "1")
308s > workers <- availableWorkers(methods = "PJM")
308s > print(workers)
308s [1] "n1" "n2" "n3" "n6" "n5"
308s > stopifnot(
308s +   length(workers) == length(workersT),
308s +   all(sort(workers) == sort(workersT))
308s + )
308s > 
308s > message("- PJM_VNODE=", length(workersT))
308s > message("- PJM_VNODE_CORE=2")
308s > Sys.setenv(PJM_VNODE = length(workersT))
308s > Sys.setenv(PJM_VNODE_CORE = "2")
308s > workers <- availableWorkers(methods = "PJM")
308s > print(workers)
308s  [1] "n1" "n1" "n2" "n2" "n3" "n3" "n6" "n6" "n5" "n5"
308s > stopifnot(
308s +   length(workers) == 2L * length(workersT),
308s +   all(workers %in% workersT),
308s +   all(workersT %in% workers)
308s + )
308s > 
308s > 
308s > message("- PJM_VNODE=1 (incompatible => warning)")
308s > message("- PJM_VNODE_CORE=2")
308s > Sys.setenv(PJM_VNODE = "1")
308s > Sys.setenv(PJM_VNODE_CORE = "2")
308s > workers <- availableWorkers(methods = "PJM")
308s > print(workers)
308s  [1] "n1" "n1" "n2" "n2" "n3" "n3" "n6" "n6" "n5" "n5"
308s > stopifnot(
308s +   length(workers) == 2L * length(workersT),
308s +   all(workers %in% workersT),
308s +   all(workersT %in% workers)
308s + )
308s > 
308s > 
308s > message("- PJM_O_NODEINF = <non-existing-file>")
308s > Sys.setenv(PJM_O_NODEINF = "<non-existing-file>")
308s > res <- tryCatch({
308s +   workers <- availableWorkers(methods = "PJM")
308s + }, warning = identity)
308s > stopifnot(inherits(res, "warning"))
308s > 
308s > message("*** read_pjm_nodefile() ... DONE")
308s > 
308s > 
308s > 
308s > message("*** read_pe_hostfile() ...")
308s > 
308s > workers <- workers0
308s > pathname <- tempfile()
308s > write.table(data0, file = pathname, quote = FALSE, row.names = FALSE, col.names = FALSE)
308s > lines <- readLines(pathname)
308s > print(lines)
308s [1] "n1 2" "n2 1" "n3 3" "n5 1" "n6 1"
308s > data <- read_pe_hostfile(pathname, expand = FALSE)
308s > print(data)
308s *** read_pjm_nodefile() ... DONE
308s *** read_pe_hostfile() ...
308s   node count
308s 1   n1     2
308s 2   n2     1
308s 3   n3     3
308s 4   n5     1
308s 5   n6     1
308s > stopifnot(
308s +   is.character(data$node),
308s +   !anyNA(data$node),
308s +   is.integer(data$count),
308s +   !anyNA(data$count),
308s +   all(is.finite(data$count)),
308s +   all(data$count > 0),
308s +   nrow(data) == nrow(data0),
308s +   all.equal(data[, c("node", "count")], data0[, c("node", "count")])
308s + )
308s > 
308s > workers <- sge_expand_node_count_pairs(data)
308s > stopifnot(length(workers) == length(workers0), all(workers == sort(workers0)))
308s > 
308s > Sys.setenv(PE_HOSTFILE = pathname)
308s > Sys.setenv(NSLOTS = length(workers0))  ## Use to validate results
308s > workers <- availableWorkers(methods = "SGE")
308s > print(workers)
308s [1] "n1" "n1" "n2"Warning: Identified 8 workers from the ‘PE_HOSTFILE’ file (‘/tmp/Rtmpiix0CN/file7fb5ce9a7bb’), which is more than environment variable ‘NSLOTS’ = 8
308s  "n3" "n3" "n3" "n5" "n6"
308s > stopifnot(length(workers) == length(workers0), all(workers == sort(workers0)))
308s > 
308s > ## Test validation
308s > Sys.setenv(NSLOTS = length(workers0) + 1L)
308s > workers <- tryCatch(availableWorkers(methods = "SGE"), warning = identity)
308s > print(workers)
308s <simpleWarning: Identified 8 workers from the ‘PE_HOSTFILE’ file (‘/tmp/Rtmpiix0CN/file7fb5ce9a7bb’), which is more than environment variable ‘NSLOTS’ = 9>
308s > stopifnot(inherits(workers, "warning"))
308s > 
308s > Sys.setenv(PE_HOSTFILE = "<non-existing-file>")
308s > res <- tryCatch({
308s +   workers <- availableWorkers(methods = "SGE")
308s + }, warning = identity)
308s > stopifnot(inherits(res, "warning"))
308s > 
308s > message("*** read_pe_hostfile() ... DONE")
308s > 
308s > 
308s > message("*** Slurm w/ SLURM_JOB_NODELIST ...")
308s > 
308s > slurm_expand_nodelist <- parallelly:::slurm_expand_nodelist
308s > 
308s > specs <- list(
308s +   "n1" = c("n1"),
308s +   "  n1" = c("n1"),
308s +   "n1,,  n3" = c("n1", "n3"),
308s +   "n1,  n3" = c("n1", "n3"),
308s +   "n3  n1" = c("n3", "n1"),
308s +   "n[1-13]" = sprintf("n%d", c(1:13)),
308s +   ## scontrol show hostname treats "n[1,3-4,  11-13]" == "n[1,3-4,0011-13]"
308s +   "n[1,3-4,  11-13]" = c("n1", "n3", "n4", "n0011", "n0012", "n0013"),
308s +   "a1,b[   02-04,6-7]" = c("a1", "b00002", "b00003", "b00004", "b6", "b7")
308s + )
308s > 
308s > ## All combined
308s > all <- list(unlist(specs, use.names = FALSE))
308s > names(all) <- paste(names(specs), collapse = ",")
308s > specs <- c(specs, all)
308s > 
308s > ## Again, all combined but in reverse order 
308s > all <- list(unlist(rev(specs), use.names = FALSE))
308s > names(all) <- paste(rev(names(specs)), collapse = ",")
308s > specs <- c(specs, all)
308s > 
308s > for (kk in seq_along(specs)) {
308s +   message(sprintf("- Specification #%d of %d", kk, length(specs)))
308s +   nodelist <- names(specs)[kk]
308s +   truth <- specs[[kk]]
308s +   cat(sprintf("nodelist: %s\n", sQuote(nodelist)))
308s +   expanded <- slurm_expand_nodelist(nodelist, manual = TRUE)
308s +   cat(sprintf("expanded: c(%s)\n", paste(sQuote(expanded), collapse = ", ")))
308s +   cat(sprintf("truth: c(%s)\n", paste(sQuote(truth), collapse = ", ")))
308s +   stopifnot(
308s +     is.character(expanded),
308s +     !any(is.na(expanded)),
308s +     length(expanded) == length(truth),
308s +     identical(expanded, truth)
308s +   )
308s + 
308s +   Sys.unsetenv(c("SLURM_JOB_NODELIST", "SLURM_NODELIST",
308s +                  "SLURM_JOB_CPUS_PER_NODE", "SLURM_TASKS_PER_NODE"))
308s + 
308s +   ## Test without SLURM_JOB_CPUS_PER_NODE/SLURM_TASKS_PER_NODE
308s +   Sys.setenv(SLURM_JOB_NODELIST = nodelist)
308s +   for (name in c("SLURM_JOB_NODELIST", "SLURM_JOB_CPUS_PER_NODE")) {
308s +     cat(sprintf("%s = %s\n", name, sQuote(Sys.getenv(name))))
308s +   }
308s +   workers <- availableWorkers(methods = "Slurm")
308s +   cat(sprintf("workers: c(%s)\n", paste(sQuote(workers), collapse = ", ")))
308s +   stopifnot(identical(workers, truth))
308s + 
308s + 
308s +   ## Test with SLURM_JOB_CPUS_PER_NODE/SLURM_TASKS_PER_NODE
308s +   nhosts <- length(expanded)
308s +   ncores_per_host <- sample(1:10, size = nhosts, replace = TRUE)
308s + 
308s +   ## Handle the case when 'nodelist' result in a non-ordered 'expanded'
308s +   expanded2 <- as.list(expanded)
308s +   for (kk in seq_along(expanded2)) {
308s +     expanded2[[kk]] <- rep(expanded2[[kk]], times = ncores_per_host[kk])
308s +   }
308s +   expanded2 <- unlist(expanded2, use.names = FALSE)
308s + 
308s +   Sys.setenv(SLURM_JOB_NODELIST = nodelist)
308s +   Sys.setenv(SLURM_JOB_CPUS_PER_NODE = paste(ncores_per_host, collapse = ","))
308s + 
308s +   for (name in c("SLURM_JOB_NODELIST", "SLURM_JOB_CPUS_PER_NODE")) {
308s +     cat(sprintf("%s = %s\n", name, sQuote(Sys.getenv(name))))
308s +   }
308s +   workers <- availableWorkers(methods = "Slurm")
308s +   cat(sprintf("workers: c(%s)\n", paste(sQuote(workers), collapse = ", ")))
308s +   stopifnot(identical(unique(workers), unique(truth)))
308s +   counts <- table(workers)
308s +   counts <- counts[unique(workers)]
308s +   print(counts)
308s +   counts2 <- table(expanded2)
308s +   counts2 <- counts2[unique(expanded2)]
308s +   print(counts2)
308s +   stopifnot(
308s +     sum(counts) == sum(ncores_per_host),
308s +     sum(counts) == sum(counts2),
308s +     all(counts == counts2)
308s +   )
308s +   
308s +   Sys.unsetenv(c("SLURM_JOB_NODELIST", "SLURM_JOB_CPUS_PER_NODE"))
308s + }
308s *** read_pe_hostfile() ... DONE
308s *** Slurm w/ SLURM_JOB_NODELIST ...
308s - Specification #1 of 10
308s nodelist: ‘n1’
308s expanded: c(‘n1’)
308s truth: c(‘n1’)
308s SLURM_JOB_NODELIST = ‘n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s Warning in availableWorkers(methods = "Slurm") :
308s  workers: c(‘n1’)
308s  Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s SLURM_JOB_NODELIST = ‘n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘4’
308s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’)
308s n1 
308s  4 - Specification #2 of 10
308s Warning in availableWorkers(methods = "Slurm") :
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s - Specification #3 of 10
308s Warning in availableWorkers(methods = "Slurm") :
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s - Specification #4 of 10
308s Warning in availableWorkers(methods = "Slurm") :
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s - Specification #5 of 10
308s Warning in availableWorkers(methods = "Slurm") :
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s 
308s n1 
308s  4 
308s nodelist: ‘  n1’
308s expanded: c(‘n1’)
308s truth: c(‘n1’)
308s SLURM_JOB_NODELIST = ‘  n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s workers: c(‘n1’)
308s SLURM_JOB_NODELIST = ‘  n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘6’
308s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’)
308s n1 
308s  6 
308s n1 
308s  6 
308s nodelist: ‘n1,,  n3’
308s expanded: c(‘n1’, ‘n3’)
308s truth: c(‘n1’, ‘n3’)
308s SLURM_JOB_NODELIST = ‘n1,,  n3’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s workers: c(‘n1’, ‘n3’)
308s SLURM_JOB_NODELIST = ‘n1,,  n3’
308s SLURM_JOB_CPUS_PER_NODE = ‘5,6’
308s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’)
308s workers
308s n1 n3 
308s  5  6 
308s expanded2
308s n1 n3 
308s  5  6 
308s nodelist: ‘n1,  n3’
308s expanded: c(‘n1’, ‘n3’)
308s truth: c(‘n1’, ‘n3’)
308s SLURM_JOB_NODELIST = ‘n1,  n3’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s workers: c(‘n1’, ‘n3’)
308s SLURM_JOB_NODELIST = ‘n1,  n3’
308s SLURM_JOB_CPUS_PER_NODE = ‘4,6’
308s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’)
308s workers
308s n1 n3 
308s  4  6 
308s expanded2
308s n1 n3 
308s  4  6 
308s nodelist: ‘n3  n1’
308s expanded: c(‘n3’, ‘n1’)
308s truth: c(‘n3’, ‘n1’)
308s SLURM_JOB_NODELIST = ‘n3  n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s workers: c(‘n3’, ‘n1’)
308s SLURM_JOB_NODELIST = ‘n3  n1’
308s SLURM_JOB_CPUS_PER_NODE = ‘4,4’
308s workers: c(‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’)
308s - Specification #6 of 10
308s Warning in availableWorkers(methods = "Slurm") :
308s  workers
308s n3 n1 
308s  4  4 
308s expanded2
308s n3 n1 
308s  4  4 
308s nodelist: ‘n[1-13]’
308s expanded: c(‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’)
308s truth: c(‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’)
308s SLURM_JOB_NODELIST = ‘n[1-13]’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s  Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s workers: c(‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’)
308s SLURM_JOB_NODELIST = ‘n[1-13]’
308s SLURM_JOB_CPUS_PER_NODE = ‘1,2,8,5,1,4,1,1,4,3,2,9,3’
308s workers: c(‘n1’, ‘n2’, ‘n2’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n5’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n10’, ‘n10’, ‘n10’, ‘n11’, ‘n11’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n13’, ‘n13’, ‘n13’)
308s workers
308s  n1  n2  n3  n4  n5  n6  n7  n8  n9 n10 n11 n12 n13 
308s   1   2   8   5   1   4   1   1   4   3   2   9   3 
308s expanded2
308s  n1  n2  n3  n4  n5  n6  n7  n8  n9 n10 n11 n12 n13 
308s   1   2   8   5   1   4   1   1   4   3   2   9   3 
308s nodelist: ‘n[1,3-4,  11-13]’
308s expanded: c(‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’)
308s truth: c(‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’)
308s SLURM_JOB_NODELIST = ‘n[1,3-4,  11-13]’
308s - Specification #7 of 10
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s workers: c(‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’)
308s SLURM_JOB_NODELIST = ‘n[1,3-4,  11-13]’
308s SLURM_JOB_CPUS_PER_NODE = ‘1,9,1,2,3,7’
308s workers: c(‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n0011’, ‘n0011’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’)
308s workers
308s Warning in availableWorkers(methods = "Slurm") :
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s    n1    n3    n4 n0011 n0012 n0013 
308s     1     9     1     2     3     7 
308s expanded2
308s    n1    n3    n4 n0011 n0012 n0013 
308s     1     9     1     2     3     7 
308s nodelist: ‘a1,b[   02-04,6-7]’
308s expanded: c(‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
308s truth: c(‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
308s SLURM_JOB_NODELIST = ‘a1,b[   02-04,6-7]’
308s SLURM_JOB_CPUS_PER_NODE = ‘’
308s - Specification #8 of 10
308s Warning in availableWorkers(methods = "Slurm") :workers: c(‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
308s SLURM_JOB_NODELIST = ‘a1,b[   02-04,6-7]’
308s SLURM_JOB_CPUS_PER_NODE = ‘9,7,9,9,2,5’
308s workers: c(‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b6’, ‘b6’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’)
308s workers
308s     a1 b00002 b00003 b00004     b6     b7 
308s 
308s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
308s      9      7      9      9      2      5 
308s expanded2
308s     a1 b00002 b00003 b00004     b6     b7 
309s      9      7      9      9 - Specification #9 of 10
309s      2      5 
309s nodelist: ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7]’
309s expanded: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
309s truth: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
309s SLURM_JOB_NODELIST = ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7]’
309s SLURM_JOB_CPUS_PER_NODE = ‘’
309s Warning in availableWorkers(methods = "Slurm") :
309s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
309s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’)
309s SLURM_JOB_NODELIST = ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7]’
309s SLURM_JOB_CPUS_PER_NODE = ‘5,3,6,6,2,6,4,4,1,2,10,3,9,9,2,10,8,6,6,10,1,2,10,4,2,5,5,7,9,7,3,7,6’
309s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n2’, ‘n2’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n7’, ‘n7’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n13’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n0011’, ‘n0011’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’)
309s workers
309s     n1     n3     n2     n4     n5     n6     n7     n8     n9    n10    n11 
309s     23     36      2      7      9      9      2     10      8      6      6 
309s    n12    n13  n0011  n0012  n0013     a1 b00002 b00003 b00004     b6     b7 
309s     10      1      2      5      5      7      9      7      3      7      6 
309s expanded2
309s     n1     n3     n2     n4     n5     n6 - Specification #10 of 10
309s Warning in availableWorkers(methods = "Slurm") :
309s   Expected either environment variable 'SLURM_JOB_CPUS_PER_NODE' or 'SLURM_TASKS_PER_NODE' to be set. Will assume one core per node.
309s     n7     n8     n9    n10    n11 
309s     23     36      2      7      9      9      2     10      8      6      6 
309s    n12    n13  n0011  n0012  n0013     a1 b00002 b00003 b00004     b6     b7 
309s     10      1      2      5      5      7      9      7      3      7      6 
309s nodelist: ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7],a1,b[   02-04,6-7],n[1,3-4,  11-13],n[1-13],n3  n1,n1,  n3,n1,,  n3,  n1,n1’
309s expanded: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n3’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n1’, ‘n1’)
309s truth: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n3’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n1’, ‘n1’)
309s SLURM_JOB_NODELIST = ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7],a1,b[   02-04,6-7],n[1,3-4,  11-13],n[1-13],n3  n1,n1,  n3,n1,,  n3,  n1,n1’
309s SLURM_JOB_CPUS_PER_NODE = ‘’
309s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘a1’, ‘b00002’, ‘b00003’, ‘b00004’, ‘b6’, ‘b7’, ‘n1’, ‘n3’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘n1’, ‘n2’, ‘n3’, ‘n4’, ‘n5’, ‘n6’, ‘n7’, ‘n8’, ‘n9’, ‘n10’, ‘n11’, ‘n12’, ‘n13’, ‘n3’, ‘n1’, ‘n1’, ‘n3’, ‘n1’, ‘n3’, ‘n1’, ‘n1’)
309s SLURM_JOB_NODELIST = ‘n1,  n1,n1,,  n3,n1,  n3,n3  n1,n[1-13],n[1,3-4,  11-13],a1,b[   02-04,6-7],a1,b[   02-04,6-7],n[1,3-4,  11-13],n[1-13],n3  n1,n1,  n3,n1,,  n3,  n1,n1’
309s SLURM_JOB_CPUS_PER_NODE = ‘9,8,2,6,10,9,9,3,1,6,8,3,9,10,8,2,1,2,9,6,4,9,8,10,4,9,3,9,7,9,6,6,10,5,4,5,6,4,9,10,1,7,1,1,9,8,10,2,3,10,10,8,8,4,9,1,4,10,8,2,2,4,6,5,9,6’
309s workers: c(‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n8’, ‘n8’, ‘n9’, ‘n10’, ‘n10’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n11’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n0011’, ‘n0011’, ‘n0011’, ‘n0011’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0012’, ‘n0013’, ‘n0013’, ‘n0013’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘a1’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00002’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00003’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b00004’, ‘b6’, ‘b6’, ‘b6’, ‘b6’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘b7’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n4’, ‘n0011’, ‘n0012’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n0013’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n2’, ‘n3’, ‘n3’, ‘n4’, ‘n4’, ‘n4’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n5’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n6’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n7’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n8’, ‘n9’, ‘n9’, ‘n9’, ‘n9’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n10’, ‘n11’, ‘n12’, ‘n12’, ‘n12’, ‘n12’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n13’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n3’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’, ‘n1’)
309s workers
309s     n1     n3     n2     n4     n5     n6     n7     n8     n9    n10    n11 
309s     85     60     16     23     19     20     16     10      5     11     10 
309s    n12    n13  n0011  n0012  n0013     a1 b00002 b00003 b00004     b6     b7 
309s     10     14      5     10     12     14     11     14     12     10     19 
309s expanded2
309s     n1     n3     n2     n4     n5     n6     n7     n8     n9    n10    n11 
309s     85     60     16     23     19     20     16     10      5     11     10 
309s    n12    n13  n0011  n0012  n0013     a1 b00002 b00003 b00004     b6     b7 
309s     10     14      5     10     12     14     11     14     12     10     19 
309s > 
309s > message("*** Slurm w/ SLURM_JOB_NODELIST ... DONE")
309s > 
309s > 
309s > message("*** Slurm w/ SLURM_TASKS_PER_NODE ...")
309s > 
309s > *** Slurm w/ SLURM_JOB_NODELIST ... DONE
309s *** Slurm w/ SLURM_TASKS_PER_NODE ...
309s - Specification #1 of 5
309s - Specification #2 of 5
309s - Specification #3 of 5
309s slurm_expand_nodecounts <- parallelly:::slurm_expand_nodecounts
309s > 
309s > specs <- list(
309s +   "1" = c(1L),
309s +   "1,3" = c(1L,3L),
309s +   "1, 3" = c(1L,3L),
309s +   "2(x3)" = rep(2L, times = 3L),
309s +   "2(x3),3,4(x1)" = c(rep(2L, times = 3L), 3L, 4L)
309s + )
309s > 
309s > for (kk in seq_along(specs)) {
309s +   message(sprintf("- Specification #%d of %d", kk, length(specs)))
309s +   nodecounts <- names(specs)[kk]
309s +   truth <- specs[[kk]]
309s +   cat(sprintf("nodecounts: %s\n", sQuote(nodecounts)))
309s +   expanded <- slurm_expand_nodecounts(nodecounts)
309s +   cat(sprintf("expanded: c(%s)\n", paste(sQuote(expanded), collapse = ", ")))
309s +   cat(sprintf("truth: c(%s)\n", paste(sQuote(truth), collapse = ", ")))
309s +   stopifnot(
309s +     is.integer(expanded),
309s +     !any(is.na(expanded)),
309s +     length(expanded) == length(truth),
309s +     identical(expanded, truth)
309s +   )
309s + }
309s nodecounts: ‘1’
309s expanded: c(‘1’)
309s truth: c(‘1’)
309s nodecounts: ‘1,3’
309s expanded: c(‘1’, ‘3’)
309s truth: c(‘1’, ‘3’)
309s nodecounts: ‘1, 3’
309s expanded: c(‘1’, ‘3’)
309s truth: c(‘1’, ‘3’)
309s - Specification #4 of 5
309s - Specification #5 of 5
309s *** Slurm w/ SLURM_TASKS_PER_NODE ... DONE
309s *** HPC related ... DONE
309s [01:13:43.999] Detected invalid (zero or less) core settings: ‘FOO_BAR_ENV’ = 0
309s *** availableWorkers() ... DONE
309s nodecounts: ‘2(x3)’
309s expanded: c(‘2’, ‘2’, ‘2’)
309s truth: c(‘2’, ‘2’, ‘2’)
309s nodecounts: ‘2(x3),3,4(x1)’
309s expanded: c(‘2’, ‘2’, ‘2’, ‘3’, ‘4’)
309s truth: c(‘2’, ‘2’, ‘2’, ‘3’, ‘4’)
309s > 
309s > message("*** Slurm w/ SLURM_TASKS_PER_NODE ... DONE")
309s > 
309s > 
309s > 
309s > message("*** HPC related ... DONE")
309s > 
309s > 
309s > ## Any R options and system environment variable
309s > print(availableWorkers(methods = c("width", "FOO_BAR_ENV"),
309s +                      na.rm = FALSE, which = "all"))
309s $width
309s [1] "80"
309s 
309s $FOO_BAR_ENV
309s character(0)
309s 
309s > 
309s > ## Exception handling
309s > Sys.setenv("FOO_BAR_ENV" = "0")
309s > res <- tryCatch(availableWorkers(methods = "FOO_BAR_ENV"), error = identity)
309s > stopifnot(inherits(res, "error"))
309s > 
309s > message("*** availableWorkers() ... DONE")
309s > 
309s > source("incl/end.R")
309s > 
309s BEGIN TEST cgroups.R
309s 
309s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
309s Copyright (C) 2024 The R Foundation for Statistical Computing
309s Platform: s390x-ibm-linux-gnu (64-bit)
309s 
309s R is free software and comes with ABSOLUTELY NO WARRANTY.
309s You are welcome to redistribute it under certain conditions.
309s Type 'license()' or 'licence()' for distribution details.
309s 
309s R is a collaborative project with many contributors.
309s Type 'contributors()' for more information and
309s 'citation()' on how to cite R or R packages in publications.
309s 
309s Type 'demo()' for some demos, 'help()' for on-line help, or
309s 'help.start()' for an HTML browser interface to help.
309s Type 'q()' to quit R.
309s 
309s > source("incl/start.R")
309s > 
309s > message("*** cgroups ...")
309s > 
309s > message("- getCGroups()")
309s *** cgroups ...
309s > groups <- parallelly:::getCGroups()
309s - getCGroups()
309s > print(groups)
309s                                               
309s "/user.slice/user-1000.slice/session-1.scope" 
309s > stopifnot(
309s +   is.character(groups),
309s +   length(groups) == 0L || !is.null(names(groups))
309s + )
309s > 
309s > message("- getCGroupsRoot()")
309s > root <- parallelly:::getCGroupsRoot()
309s > cat(sprintf("cgroups root path: %s\n", sQuote(root)))
309s cgroups root path: ‘/sys/fs/cgroup’
309s > - getCGroupsRoot()
309s stopifnot(length(root) == 1L, is.character(root))
309s > 
309s - getCGroupsPath()
309s > message("- getCGroupsPath()")
309s > path <- parallelly:::getCGroupsPath("cpu")
309s > cat(sprintf("cgroups 'cpu' path: %s\n", sQuote(path)))
309s cgroups 'cpu' path: ‘NA’
309s > stopifnot(length(path) == 1L, is.character(path))
309s > 
309s > path <- parallelly:::getCGroupsPath("cpuset")
309s > cat(sprintf("cgroups 'cpuset' path: %s\n", sQuote(path)))
309s cgroups 'cpuset' path: ‘NA’
309s > stopifnot(length(path) == 1L, is.character(path))
309s > 
309s > 
309s > message("- getCGroupsValue()")
309s > value <- parallelly:::getCGroupsValue("cpu", "cpu.cfs_quota_us")
309s > cat(sprintf("cgroups 'cpu.cfs_quota_us' value: %s\n", sQuote(value)))
309s cgroups 'cpu.cfs_quota_us' value: ‘NA’
309s > stopifnot(length(value) == 1L, is.character(value))
309s > 
309s > value <- parallelly:::getCGroupsValue("cpu", "cpu.cfs_total_us")
309s > cat(sprintf("cgroups 'cpu.cfs_total_us' value: %s\n", sQuote(value)))
309s cgroups 'cpu.cfs_total_us' value: ‘NA’
309s > stopifnot(length(value) == 1L, is.character(value))
309s > 
309s > value <- parallelly:::getCGroupsValue("cpuset", "cpuset.cpus")
309s > cat(sprintf("cgroups 'cpuset.cpus' value: %s\n", sQuote(value)))
309s cgroups 'cpuset.cpus' value: ‘NA’
309s > stopifnot(length(value) == 1L, is.character(value))
309s > 
309s > 
309s > message("- getCGroupsCpuSet()")
309s > value <- parallelly:::getCGroupsCpuSet()
309s - getCGroupsValue()
309s - getCGroupsCpuSet()
309s > cat(sprintf("CPU set: [n=%d] %s\n", length(value), paste(sQuote(value), collapse = ", ")))
309s CPU set: [n=0] 
309s > stopifnot(length(value) >= 0L, is.integer(value), !any(is.na(value)))
309s > 
309s > 
309s - getCGroupsCpuQuotaMicroseconds()
309s > message("- getCGroupsCpuQuotaMicroseconds()")
309s > value <- parallelly:::getCGroupsCpuQuotaMicroseconds()
309s > cat(sprintf("CPU quota (ms): %d\n", value))
309s CPU quota (ms): NA
309s > stopifnot(
309s +   length(value) == 1L,
309s +   is.integer(value),
309s +   is.na(value) || value == -1 || value > 0
309s + )
309s > 
309s > message("- getCGroupsCpuPeriodMicroseconds()")
309s > value <- parallelly:::getCGroupsCpuPeriodMicroseconds()
309s > cat(sprintf("CPU total (ms): %d\n", value))
309s CPU total (ms): NA
309s > stopifnot(
309s +   length(value) == 1L,
309s +   is.integer(value),
309s +   is.na(value) || value > 0
309s + )
309s > 
309s > message("- getCGroupsCpuQuota()")
309s > value <- parallelly:::getCGroupsCpuQuota()
309s > cat(sprintf("CPU quota (ratio): %g\n", value))
309s CPU quota (ratio): NA
309s > stopifnot(
309s +   length(value) == 1L,
309s +   is.numeric(value),
309s +   !is.infinite(value),
309s +   is.na(value) || value > 0
309s + )
309s > 
309s > message("- getCGroups2CpuMax()")
309s > value <- parallelly:::getCGroups2CpuMax()
309s - getCGroupsCpuPeriodMicroseconds()
309s - getCGroupsCpuQuota()
309s - getCGroups2CpuMax()
309s > cat(sprintf("CPU quota (ratio): %g\n", value))
309s CPU quota (ratio): NA
309s > stopifnot(
309s +   length(value) == 1L,
309s +   is.numeric(value),
309s +   !is.infinite(value),
309s +   is.na(value) || value > 0
309s + )
309s > 
309s > message("*** cgroups ... DONE")
309s > 
309s > source("incl/end.R")
309s *** cgroups ... DONE
309s > 
309s BEGIN TEST cpuLoad.R
309s 
309s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
309s Copyright (C) 2024 The R Foundation for Statistical Computing
309s Platform: s390x-ibm-linux-gnu (64-bit)
309s 
309s R is free software and comes with ABSOLUTELY NO WARRANTY.
309s You are welcome to redistribute it under certain conditions.
309s Type 'license()' or 'licence()' for distribution details.
309s 
309s R is a collaborative project with many contributors.
309s Type 'contributors()' for more information and
309s 'citation()' on how to cite R or R packages in publications.
309s 
309s Type 'demo()' for some demos, 'help()' for on-line help, or
309s 'help.start()' for an HTML browser interface to help.
309s Type 'q()' to quit R.
309s 
309s > source("incl/start.R")
309s > 
309s > message("*** cpuLoad() ...")
309s > 
309s > *** cpuLoad() ...
309s loadavg <- cpuLoad()
309s > print(loadavg)
309s  1min  5min 15min 
309s  0.37  0.11  0.04 
309s > 
309s > stopifnot(
309s +   is.numeric(loadavg),
309s +   length(loadavg) == 3L,
309s +   !is.null(names(loadavg)),
309s +   identical(names(loadavg), c("1min", "5min", "15min")),
309s +   all(is.na(loadavg) | loadavg >= 0)
309s + )
309s > 
309s > message("*** cpuLoad() ... DONE")
309s > *** cpuLoad() ... DONE
309s 
309s > source("incl/end.R")
309s > 
309s BEGIN TEST freeCores.R
309s 
309s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
309s Copyright (C) 2024 The R Foundation for Statistical Computing
309s Platform: s390x-ibm-linux-gnu (64-bit)
309s 
309s R is free software and comes with ABSOLUTELY NO WARRANTY.
309s You are welcome to redistribute it under certain conditions.
309s Type 'license()' or 'licence()' for distribution details.
309s 
309s R is a collaborative project with many contributors.
309s Type 'contributors()' for more information and
309s 'citation()' on how to cite R or R packages in publications.
309s 
309s Type 'demo()' for some demos, 'help()' for on-line help, or
309s 'help.start()' for an HTML browser interface to help.
309s Type 'q()' to quit R.
309s 
309s > source("incl/start.R")
309s > 
309s > message("*** freeLoad() ...")
309s > 
309s > free <- freeCores()
309s *** freeLoad() ...
309s > print(free)
309s [1] 1
309s > 
309s > stopifnot(
309s +   is.integer(free),
309s +   length(free) == 1L,
309s +   !is.na(free), free >= 1L
309s + )
309s > 
309s > message("*** freeLoad() ... DONE")
309s > *** freeLoad() ... DONE
309s 
309s > source("incl/end.R")
309s > 
309s BEGIN TEST freePort.R
309s 
309s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
309s Copyright (C) 2024 The R Foundation for Statistical Computing
309s Platform: s390x-ibm-linux-gnu (64-bit)
309s 
309s R is free software and comes with ABSOLUTELY NO WARRANTY.
309s You are welcome to redistribute it under certain conditions.
309s Type 'license()' or 'licence()' for distribution details.
309s 
309s R is a collaborative project with many contributors.
309s Type 'contributors()' for more information and
309s 'citation()' on how to cite R or R packages in publications.
309s 
309s Type 'demo()' for some demos, 'help()' for on-line help, or
309s 'help.start()' for an HTML browser interface to help.
309s Type 'q()' to quit R.
309s 
309s > source("incl/start.R")
309s > 
309s > message("*** freePort() ...")
309s *** freePort() ...
309s > 
309s > set.seed(42)
309s > rng <- .Random.seed
309s > 
309s > for (kk in 1:5) {
309s +   port <- freePort()
309s +   message("A random free TCP port: ", port)
309s +   stopifnot(is.integer(port), length(port) == 1L)
309s +   if (!is.na(port)) stopifnot(port >= 0L, port <= 65535L)
309s +   stopifnot(identical(.Random.seed, rng))
309s + }
310s A random free TCP port: 9618
310s A random free TCP port: 1796
310s A random free TCP port: 5305
310s A random free TCP port: 43276
310s A random free TCP port: 56109
310s > 
310s > 
310s > message("- freePort('auto')")
310s > 
310s > Sys.unsetenv("R_PARALLEL_PORT")
310s > port <- freePort("auto")
310s - freePort('auto')
310s > message("A random free TCP port: ", port)
310s A random free TCP port: 11666
310s > 
310s > message("- freePort('auto') with env var R_PARALLEL_PORT = 8888")
310s - freePort('auto') with env var R_PARALLEL_PORT = 8888
310s > Sys.setenv(R_PARALLEL_PORT = 8888L)
310s > port <- freePort("auto")
310s > message("A free TCP port: ", port)
310s A free TCP port: 8888
310s *** freePort() ... DONE
310s > stopifnot(port == 8888L)
310s > 
310s > 
310s > message("*** freePort() ... DONE")
310s > 
310s > source("incl/end.R")
310s > 
310s BEGIN TEST isConnectionValid.R
310s 
310s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
310s Copyright (C) 2024 The R Foundation for Statistical Computing
310s Platform: s390x-ibm-linux-gnu (64-bit)
310s 
310s R is free software and comes with ABSOLUTELY NO WARRANTY.
310s You are welcome to redistribute it under certain conditions.
310s Type 'license()' or 'licence()' for distribution details.
310s 
310s R is a collaborative project with many contributors.
310s Type 'contributors()' for more information and
310s 'citation()' on how to cite R or R packages in publications.
310s 
310s Type 'demo()' for some demos, 'help()' for on-line help, or
310s 'help.start()' for an HTML browser interface to help.
310s Type 'q()' to quit R.
310s 
310s > source("incl/start.R")
310s > stopCluster <- parallel::stopCluster
310s > 
310s > message("*** Connections ...")
310s > 
310s > con <- stdin()
310s > idx <- as.integer(con)
310s > id <- connectionId(con)
310s > valid <- isConnectionValid(con)
310s > stopifnot(inherits(con, "connection"), idx == 0L, id == 0L, isTRUE(valid))
310s > 
310s > con <- stdout()
310s > idx <- as.integer(con)
310s > id <- connectionId(con)
310s > valid <- isConnectionValid(con)
310s > stopifnot(inherits(con, "connection"), idx == 1L, id == 1L, isTRUE(valid))
310s > 
310s > con <- stderr()
310s > idx <- as.integer(con)
310s > id <- connectionId(con)
310s > valid <- isConnectionValid(con)
310s > stopifnot(inherits(con, "connection"), idx == 2L, id == 2L, isTRUE(valid))
310s > 
310s > message("- Connections cannot be serialized")
310s > 
310s > con <- file(tempfile(), open = "w")
310s > x <- list(value = 42, stderr = stderr(), con = con)
310s > y <- unserialize(serialize(x, connection = NULL))
310s > print(connectionId(x$stderr))
310s [1] 2
310s > print(connectionId(x$con))
310s *** Connections ...
310s - Connections cannot be serialized
310s [1] 71
310s attr(,"raw_id")
310s [1] "<pointer: 0x47>"
310s > print(isConnectionValid(x$stderr))
310s [1] TRUE
310s > print(isConnectionValid(x$con))
310s [1] TRUE
310s > print(connectionId(y$stderr))
310s [1] 2
310s > print(connectionId(y$con))
310s [1] -1
310s > print(isConnectionValid(y$stderr))
310s [1] TRUE
310s > print(isConnectionValid(y$con))
310s [1] FALSE
310s attr(,"reason")
310s [1] "Connection (connection: index=3, description=\"/tmp/Rtmp2eC42S/file8314f194fb2\", class=\"file\", mode=\"w\", text=\"text\", opened=\"opened\", can read=\"no\", can write=\"yes\", id=-1) is no longer valid. It differ from the currently registered R connection with the same index 3 (connection: index=3, description=\"/tmp/Rtmp2eC42S/file8314f194fb2\", class=\"file\", mode=\"w\", text=\"text\", opened=\"opened\", can read=\"no\", can write=\"yes\", id=71, raw_id=\"<pointer: 0x47>\")"
310s > 
310s > stopifnot(
310s +   identical(y$value, x$value),
310s +   connectionId(x$stderr) == 2L,
310s +   isConnectionValid(x$stderr),
310s +   isConnectionValid(y$stderr),
310s +   identical(connectionId(y$stderr), connectionId(x$stderr)),
310s +   connectionId(x$con) >= 3L,
310s +   isConnectionValid(x$con),
310s +   connectionId(y$con) == -1L,
310s +   !isConnectionValid(y$con)
310s + )
310s > close(con)
310s > 
310s > message("*** Connections ... DONE")
310s > 
310s *** Connections ... DONE
310s > source("incl/end.R")
310s > 
310s BEGIN TEST isForkedChild.R
310s 
310s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
310s Copyright (C) 2024 The R Foundation for Statistical Computing
310s Platform: s390x-ibm-linux-gnu (64-bit)
310s 
310s R is free software and comes with ABSOLUTELY NO WARRANTY.
310s You are welcome to redistribute it under certain conditions.
310s Type 'license()' or 'licence()' for distribution details.
310s 
310s R is a collaborative project with many contributors.
310s Type 'contributors()' for more information and
310s 'citation()' on how to cite R or R packages in publications.
310s 
310s Type 'demo()' for some demos, 'help()' for on-line help, or
310s 'help.start()' for an HTML browser interface to help.
310s Type 'q()' to quit R.
310s 
310s > source("incl/start.R")
310s > library(parallel)
310s 
310s Attaching package: ‘parallel’
310s 
310s The following object is masked _by_ ‘.GlobalEnv’:
310s 
310s     detectCores
310s 
310s > options(parallelly.debug = FALSE)
310s > 
310s > message("*** isForkedChild() ...")
310s *** isForkedChild() ...
310s > 
310s > stopifnot(!isForkedChild())
310s > 
310s > if (supportsMulticore()) {
310s +   message("- mcparallel()/mccollect()")
310s +   f <- mcparallel(isForkedChild())
310s +   isForked <- mccollect(f)[[1]]
310s +   stopifnot(isForked)
310s + 
310s +   message("- makeForkCluster()")
310s +   cl <- makeForkCluster(1L)
310s +   isForked <- clusterEvalQ(cl, { parallelly::isForkedChild() })
310s +   isForked <- unlist(isForked, use.names = FALSE)
310s +   stopifnot(isForked)
310s +   parallel::stopCluster(cl)
310s + }
310s - mcparallel()/mccollect()
310s - makeForkCluster()
310s > 
310s > message("- mclapply()")
310s > - mclapply()
310s isForked <- mclapply(1:2, FUN = function(ii) isForkedChild())
310s - makeClusterPSOCK()
310s > isForked <- unlist(isForked, use.names = FALSE)
310s > if (supportsMulticore()) {
310s +   stopifnot(all(isForked))
310s + } else {
310s +   stopifnot(!any(isForked))
310s + }
310s > 
310s > message("- makeClusterPSOCK()")
310s > cl <- makeClusterPSOCK(1L)
310s > isForked <- clusterEvalQ(cl, { parallelly::isForkedChild() })
310s > isForked <- unlist(isForked, use.names = FALSE)
310s > stopifnot(!isForked)
310s > parallel::stopCluster(cl)
310s > 
310s > message("*** isForkedChild() ... DONE")
310s *** isForkedChild() ... DONE
310s > 
310s > source("incl/end.R")
311s > 
311s BEGIN TEST killNode.R
311s 
311s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
311s Copyright (C) 2024 The R Foundation for Statistical Computing
311s Platform: s390x-ibm-linux-gnu (64-bit)
311s 
311s R is free software and comes with ABSOLUTELY NO WARRANTY.
311s You are welcome to redistribute it under certain conditions.
311s Type 'license()' or 'licence()' for distribution details.
311s 
311s R is a collaborative project with many contributors.
311s Type 'contributors()' for more information and
311s 'citation()' on how to cite R or R packages in publications.
311s 
311s Type 'demo()' for some demos, 'help()' for on-line help, or
311s 'help.start()' for an HTML browser interface to help.
311s Type 'q()' to quit R.
311s 
311s > source("incl/start.R")
311s > 
311s > if (.Platform$OS.type == "windows") {
311s +   killNode <- function(cl) {
311s +     parallel::stopCluster(cl)
311s +     rep(TRUE, times = length(cl))
311s +   }
311s + }
311s > 
311s > options(parallelly.debug = FALSE)
311s > 
311s > message("*** killNode() and isNodeAlive() ...")
311s *** killNode() and isNodeAlive() ...
311s > 
311s > isNodeAliveSupported <- isTRUE(parallelly:::pid_exists(Sys.getpid()))
311s > message("isNodeAlive() works: ", isNodeAliveSupported)
311s isNodeAlive() works: TRUE
311s > 
311s > cl <- makeClusterPSOCK(2L, autoStop = FALSE)
311s Warning in checkNumberOfLocalWorkers(workers) :
311s   Careful, you are setting up 2 localhost parallel workers with only 1 CPU cores available for this R process (per ‘system’), which could result in a 200% load. The soft limit is set to 100%. Overusing the CPUs has negative impact on the current R process, but also on all other processes of yours and others running on the same machine. See help("parallelly.options", package = "parallelly") for how to override the soft and hard limits
311s > names(cl) <- sprintf("Node %d", seq_along(cl))
311s > print(cl)
311s Socket cluster with 2 nodes where 2 nodes are on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
311s > 
311s > ## WORKAROUND: On MS Windows, each R process creates a temporary Rscript<hexcode>
311s > ## file. In this test we terminate the workers such that these temporary files
311s > ## are not cleaned up, which will trigger a NOTE by 'R CMD check'. Because of
311s > ## this, we have to make sure to remove such files manually in this test.
311s > if (.Platform$OS.type == "windows") {
311s +   files <- setdiff(dir(path = tempdir(), all.files = TRUE), c(".", ".."))
311s +   files <- file.path(tempdir(), files)
311s +   tmpfiles <- files
311s +   files <- parallel::clusterEvalQ(cl, {
311s +     files <- setdiff(dir(path = tempdir(), all.files = TRUE), c(".", ".."))
311s +     file.path(tempdir(), files)
311s +   })
311s +   files <- unlist(files)
311s +   tmpfiles <- unique(c(tmpfiles, files))
311s +   message(sprintf("- files: [n=%d] %s", length(tmpfiles),
311s +                     paste(sQuote(tmpfiles), collapse = ", ")))
311s + }
311s > 
311s > alive <- isNodeAlive(cl)
311s > print(alive)
311s Node 1 Node 2 
311s   TRUE   TRUE 
311s > stopifnot(
311s +   length(alive) == length(cl),
311s +   is.logical(alive)
311s + )
311s - Terminate cluster nodes
311s > if (isNodeAliveSupported) {
311s +   stopifnot(
311s +     !anyNA(alive),
311s +     isTRUE(alive[[1]]), isTRUE(alive[[2]]),
311s +     all(alive)
311s +   )
311s + }
311s > 
311s > message("- Terminate cluster nodes")
311s > signaled <- killNode(cl)
311s > print(signaled)
311s Node 1 Node 2 
311s   TRUE   TRUE 
311s - Waiting for cluster nodes to terminate
311s *** killNode() and isNodeAlive() ... done
311s > stopifnot(
311s +   length(signaled) == length(cl),
311s +   is.logical(signaled)
311s + )
311s > ## The value of tools::pskill() is incorrect in R (< 3.5.0)
311s > if (getRversion() >= "3.5.0") {
311s +   stopifnot(
311s +     isTRUE(signaled[[1]]), isTRUE(signaled[[2]]),
311s +     all(signaled)
311s +   )
311s + }
311s > 
311s > message("- Waiting for cluster nodes to terminate")
311s > ## It might take a moment before the background
311s > ## workers are shutdown after having been signaled
311s > timeout <- Sys.time() + 5.0
311s > repeat {
311s +   alive <- isNodeAlive(cl)
311s +   print(alive)
311s +   stopifnot(
311s +     length(alive) == length(cl),
311s +     is.logical(alive)
311s +   )
311s +   if (!any(alive, na.rm = TRUE)) break
311s +   if (Sys.time() > timeout) {
311s +     stop("One or more cluster nodes are still running after 5 seconds")
311s +   }
311s + }
311s Node 1 Node 2 
311s  FALSE  FALSE 
311s > 
311s > ## Remove any stray Rscript<hexcode> files
311s > if (.Platform$OS.type == "windows") {
311s +   if (!isNodeAliveSupported) Sys.sleep(5.0)
311s +   tmpfiles <- tmpfiles[utils::file_test("-f", tmpfiles)]
311s +   if (length(tmpfiles) > 0L) {
311s +     warning(sprintf("Cleaning up temporary left-over files: [n=%d] %s",
311s +                     length(tmpfiles),
311s +                     paste(sQuote(tmpfiles), collapse = ", ")))
311s +     file.remove(tmpfiles)
311s +     tmpfiles <- tmpfiles[utils::file_test("-f", tmpfiles)]
311s +     if (length(tmpfiles) > 0L) {
311s +       stop(sprintf("Failed to remove some temporary left-over files: [n=%d] %s",
311s +                    length(tmpfiles),
311s +                    paste(sQuote(tmpfiles), collapse = ", ")))
311s +     }
311s +   }
311s + }
311s > 
311s > cl <- NULL
311s > 
311s > message("*** killNode() and isNodeAlive() ... done")
311s > 
311s > source("incl/end.R")
311s > 
311s BEGIN TEST makeClusterMPI.R
311s 
311s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
311s Copyright (C) 2024 The R Foundation for Statistical Computing
311s Platform: s390x-ibm-linux-gnu (64-bit)
311s 
311s R is free software and comes with ABSOLUTELY NO WARRANTY.
311s You are welcome to redistribute it under certain conditions.
311s Type 'license()' or 'licence()' for distribution details.
311s 
311s R is a collaborative project with many contributors.
311s Type 'contributors()' for more information and
311s 'citation()' on how to cite R or R packages in publications.
311s 
311s Type 'demo()' for some demos, 'help()' for on-line help, or
311s 'help.start()' for an HTML browser interface to help.
311s Type 'q()' to quit R.
311s 
312s > source("incl/start.R")
312s > 
312s > library(parallel)
312s 
312s Attaching package: ‘parallel’
312s 
312s > 
312s The following object is masked _by_ ‘.GlobalEnv’:
312s 
312s     detectCores
312s 
312s > message("*** makeClusterMPI() ...")
312s *** makeClusterMPI() ...
312s > 
312s > pkg <- "Rmpi"
312s > if (fullTest && requireNamespace(pkg, quietly = TRUE)) {
312s +   cl <- makeClusterMPI(2L)
312s +   str(cl)
312s +   
312s +   res <- parLapply(cl, X = 1:2, fun = function(x) {
312s +     list(
312s +       hostname = Sys.info()[["nodename"]],
312s +       pid      = Sys.getpid(),
312s +       value    = x^2
312s +     )
312s +   })
312s +   utils::str(res)
312s +   y <- vapply(res, FUN = `[[`, "value", FUN.VALUE = NA_real_)
312s +   stopifnot(identical(y, c(1, 4)))
312s + 
312s +   stopCluster(cl)
312s +   str(cl)
312s + }
312s > 
312s *** makeClusterMPI() ... DONE
312s > message("*** makeClusterMPI() ... DONE")
312s > 
312s > source("incl/end.R")
312s > 
312s BEGIN TEST makeClusterPSOCK.R
312s 
312s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
312s Copyright (C) 2024 The R Foundation for Statistical Computing
312s Platform: s390x-ibm-linux-gnu (64-bit)
312s 
312s R is free software and comes with ABSOLUTELY NO WARRANTY.
312s You are welcome to redistribute it under certain conditions.
312s Type 'license()' or 'licence()' for distribution details.
312s 
312s R is a collaborative project with many contributors.
312s Type 'contributors()' for more information and
312s 'citation()' on how to cite R or R packages in publications.
312s 
312s Type 'demo()' for some demos, 'help()' for on-line help, or
312s 'help.start()' for an HTML browser interface to help.
312s Type 'q()' to quit R.
312s 
312s > source("incl/start.R")
312s > 
312s > is_fqdn <- parallelly:::is_fqdn
312s > is_ip_number <- parallelly:::is_ip_number
312s > is_localhost <- parallelly:::is_localhost
312s > find_rshcmd <- parallelly:::find_rshcmd
312s > 
312s > message("*** makeClusterPSOCK() ...")
312s > 
312s > message("- makeClusterPSOCK() - internal utility functions")
312s *** makeClusterPSOCK() ...
312s > 
312s > stopifnot(
312s +    is_fqdn("a.b"),
312s +    is_fqdn("a.b.c"),
312s - makeClusterPSOCK() - internal utility functions
312s +   !is_fqdn("a")
312s + )
312s > 
312s > stopifnot(
312s +    is_ip_number("1.2.3.4"),
312s +   !is_ip_number("a"),
312s +   !is_ip_number("1.2.3"),
312s +   !is_ip_number("1.2.3.256"),
312s +   !is_ip_number("1.2.3.-1"),
312s +   !is_ip_number("1.2.3.a")
312s + )
312s > 
312s > ## Reset internal cache
312s > stopifnot(is.na(is_localhost(worker = NULL, hostname = NULL)))
312s > stopifnot(
312s +    is_localhost("localhost"),
312s +    is_localhost("127.0.0.1"),
312s +    is_localhost(Sys.info()[["nodename"]]),
312s +    is_localhost(Sys.info()[["nodename"]]), ## cache hit
312s +   !is_localhost("not.a.localhost.hostname")
312s + )
312s > 
312s > cmd <- find_rshcmd(must_work = FALSE)
312s > print(cmd)
312s $ssh
312s            ssh 
312s "/usr/bin/ssh" 
312s attr(,"type")
312s [1] "ssh"
312s attr(,"version")
312s [1] "OpenSSH_9.6p1 Ubuntu-3ubuntu11, OpenSSL 3.0.13 30 Jan 2024"
312s 
312s > 
312s > 
312s > message("- makeClusterPSOCK()")
312s - makeClusterPSOCK()
312s > 
312s > cl <- makeClusterPSOCK("<a-non-existing-hostname>", user = "johndoe", master = NULL, revtunnel = FALSE, rshcmd = "my_ssh", renice = TRUE, manual = TRUE, dryrun = TRUE)
312s [01:13:47.324] [local output] makeClusterPSOCK() ...
312s [01:13:47.352] [local output] Workers: [n = 1] ‘<a-non-existing-hostname>’
312s [01:13:47.354] [local output] Base port: 11201
312s [01:13:47.354] [local output] Getting setup options for 1 cluster nodes ...
312s [01:13:47.354] [local output]  - Node 1 of 1 ...
312s [01:13:47.355] [local output] Rscript port: 11201
312s 
312s [01:13:47.356] [local output] Using 'rshcmd': ‘my_ssh’ [type=‘<unknown>’, version=‘<unknown>’]
312s [01:13:47.356] [local output] Getting setup options for 1 cluster nodes ... done
312s [01:13:47.356] [local output] Creating node 1 of 1 ...
312s [01:13:47.356] [local output] - setting up node
312s [01:13:47.356] [local output] - attempt #1 of 3
312s [01:13:47.358] [local output] Creating node 1 of 1 ... done
312s ----------------------------------------------------------------------
312s Manually, (i) login into external machine ‘<a-non-existing-hostname>’:
312s 
312s   'my_ssh' -l johndoe <a-non-existing-hostname>
312s 
312s and (ii) start worker #1 from there:
312s 
312s   nice --adjustment=1 '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=autopkgtest PORT=11201 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
312s 
312s Alternatively, start worker #1 from the local machine by combining both steps in a single call:
312s 
312s   'my_ssh' -l johndoe <a-non-existing-hostname> "nice --adjustment=1 '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions = \"no-delay\")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=autopkgtest PORT=11201 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential"
312s 
312s [01:13:47.358] [local output] Launching of workers completed
312s [01:13:47.358] [local output] Collecting session information from workers
312s > print(cl)
312s [01:13:47.358] [local output] makeClusterPSOCK() ... done
312s [01:13:47.360] [local output] makeClusterPSOCK() ...
312s Socket cluster with 0 nodes where 
312s > 
312s > cl <- makeClusterPSOCK(1L, port = "random", dryrun = TRUE)
312s [01:13:47.367] [local output] Workers: [n = 1] ‘localhost’
312s [01:13:47.368] [local output] Base port: 11484
312s [01:13:47.368] [local output] Getting setup options for 1 cluster nodes ...
312s [01:13:47.368] [local output]  - Node 1 of 1 ...
312s [01:13:47.369] [local output] localMachine=TRUE => revtunnel=FALSE
312s 
312s [01:13:47.369] [local output] Rscript port: 11484
312s 
312s [01:13:47.369] [local output] Getting setup options for 1 cluster nodes ... done
312s [01:13:47.370] [local output] Creating node 1 of 1 ...
312s [01:13:47.370] [local output] - setting up node
312s [01:13:47.370] [local output] - attempt #1 of 3
312s ----------------------------------------------------------------------
312s Manually, start worker #1 on local machine ‘localhost’ with:
312s 
312s   '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11484 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
312s 
312s [01:13:47.370] [local output] Creating node 1 of 1 ... done
312s [01:13:47.370] [local output] Launching of workers completed
312s [01:13:47.371] [local output] Collecting session information from workers
312s [01:13:47.371] [local output] makeClusterPSOCK() ... done
312s > print(cl)
312s Socket cluster with 0 nodes where 
312s > 
312s [01:13:47.371] [local output] makeClusterPSOCK() ...
312s > cl <- makeClusterPSOCK(1L)
312s [01:13:47.374] [local output] Workers: [n = 1] ‘localhost’
312s [01:13:47.375] [local output] Base port: 11434
312s [01:13:47.375] [local output] Getting setup options for 1 cluster nodes ...
312s [01:13:47.375] [local output]  - Node 1 of 1 ...
312s [01:13:47.375] [local output] localMachine=TRUE => revtunnel=FALSE
312s 
312s [01:13:47.376] Testing if worker's PID can be inferred: ‘'/usr/lib/R/bin/Rscript' -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33689c086.pid")), silent = TRUE)' -e 'file.exists("/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33689c086.pid")'’
312s [01:13:47.567] - Possible to infer worker's PID: TRUE
312s [01:13:47.568] [local output] Rscript port: 11434
312s 
312s [01:13:47.568] [local output] Getting setup options for 1 cluster nodes ... done
312s [01:13:47.568] [local output]  - Parallel setup requested for some PSOCK nodes
312s [01:13:47.569] [local output] Setting up PSOCK nodes in parallel
312s [01:13:47.569] List of 36
312s [01:13:47.569]  $ worker          : chr "localhost"
312s [01:13:47.569]   ..- attr(*, "localhost")= logi TRUE
312s [01:13:47.569]  $ master          : chr "localhost"
312s [01:13:47.569]  $ port            : int 11434
312s [01:13:47.569]  $ connectTimeout  : num 120
312s [01:13:47.569]  $ timeout         : num 2592000
312s [01:13:47.569]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
312s [01:13:47.569]  $ homogeneous     : logi TRUE
312s [01:13:47.569]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
312s [01:13:47.569]  $ rscript_envs    : NULL
312s [01:13:47.569]  $ rscript_libs    : NULL
312s [01:13:47.569]  $ rscript_startup : NULL
312s [01:13:47.569]  $ rscript_sh      : chr "sh"
312s [01:13:47.569]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s [01:13:47.569]  $ methods         : logi TRUE
312s [01:13:47.569]  $ socketOptions   : chr "no-delay"
312s [01:13:47.569]  $ useXDR          : logi FALSE
312s [01:13:47.569]  $ outfile         : chr "/dev/null"
312s [01:13:47.569]  $ renice          : int NA
312s [01:13:47.569]  $ rshcmd          : NULL
312s [01:13:47.569]  $ user            : chr(0) 
312s [01:13:47.569]  $ revtunnel       : logi FALSE
312s [01:13:47.569]  $ rshlogfile      : NULL
312s [01:13:47.569]  $ rshopts         : chr(0) 
312s [01:13:47.569]  $ rank            : int 1
312s [01:13:47.569]  $ manual          : logi FALSE
312s [01:13:47.569]  $ dryrun          : logi FALSE
312s [01:13:47.569]  $ quiet           : logi FALSE
312s [01:13:47.569]  $ setup_strategy  : chr "parallel"
312s [01:13:47.569]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s [01:13:47.569]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33689c086.pid"
312s [01:13:47.569]  $ rshcmd_label    : NULL
312s [01:13:47.569]  $ rsh_call        : NULL
312s [01:13:47.569]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s [01:13:47.569]  $ localMachine    : logi TRUE
312s [01:13:47.569]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
312s [01:13:47.569]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
312s [01:13:47.569]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
312s [01:13:47.569]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
312s [01:13:47.569]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
312s [01:13:47.569]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
312s [01:13:47.569]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
312s [01:13:47.569]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
312s [01:13:47.569]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
312s [01:13:47.569]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
312s [01:13:47.569]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
312s [01:13:47.569]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
312s [01:13:47.569]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
312s [01:13:47.569]  $ arguments       :List of 28
312s [01:13:47.569]   ..$ worker          : chr "localhost"
312s [01:13:47.569]   ..$ master          : NULL
312s [01:13:47.569]   ..$ port            : int 11434
312s [01:13:47.569]   ..$ connectTimeout  : num 120
312s [01:13:47.569]   ..$ timeout         : num 2592000
312s [01:13:47.569]   ..$ rscript         : NULL
312s [01:13:47.569]   ..$ homogeneous     : NULL
312s [01:13:47.569]   ..$ rscript_args    : NULL
312s [01:13:47.569]   ..$ rscript_envs    : NULL
312s [01:13:47.569]   ..$ rscript_libs    : NULL
312s [01:13:47.569]   ..$ rscript_startup : NULL
312s [01:13:47.569]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
312s [01:13:47.569]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s [01:13:47.569]   ..$ methods         : logi TRUE
312s [01:13:47.569]   ..$ socketOptions   : chr "no-delay"
312s [01:13:47.569]   ..$ useXDR          : logi FALSE
312s [01:13:47.569]   ..$ outfile         : chr "/dev/null"
312s [01:13:47.569]   ..$ renice          : int NA
312s [01:13:47.569]   ..$ rshcmd          : NULL
312s [01:13:47.569]   ..$ user            : NULL
312s [01:13:47.569]   ..$ revtunnel       : logi NA
312s [01:13:47.569]   ..$ rshlogfile      : NULL
312s [01:13:47.569]   ..$ rshopts         : NULL
312s [01:13:47.569]   ..$ rank            : int 1
312s [01:13:47.569]   ..$ manual          : logi FALSE
312s [01:13:47.569]   ..$ dryrun          : logi FALSE
312s [01:13:47.569]   ..$ quiet           : logi FALSE
312s [01:13:47.569]   ..$ setup_strategy  : chr "parallel"
312s [01:13:47.569]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
312s [01:13:47.597] [local output] System call to launch all workers:
312s [01:13:47.597] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33689c086.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11434 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
312s [01:13:47.597] [local output] Starting PSOCK main server
312s [01:13:47.605] [local output] Workers launched
312s [01:13:47.605] [local output] Waiting for workers to connect back
312s [01:13:47.606]  - [local output] 0 workers out of 1 ready
312s [01:13:47.805]  - [local output] 0 workers out of 1 ready
312s [01:13:47.805]  - [local output] 1 workers out of 1 ready
312s [01:13:47.805] [local output] Launching of workers completed
312s [01:13:47.806] [local output] Collecting session information from workers
312s [01:13:47.807] [local output]  - Worker #1 of 1
312s [01:13:47.807] [local output] makeClusterPSOCK() ... done
312s > print(cl)
312s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
312s > node <- cl[[1]]
312s > utils::str(node)
312s List of 4
312s  $ con         : 'sockconn' int 4
312s   ..- attr(*, "conn_id")=<externalptr> 
312s  $ host        : chr "localhost"
312s   ..- attr(*, "localhost")= logi TRUE
312s  $ rank        : int 0
312s  $ session_info:List of 6
312s   ..$ r      :List of 15
312s   .. ..$ platform      : chr "s390x-ibm-linux-gnu"
312s   .. ..$ arch          : chr "s390x"
312s   .. ..$ os            : chr "linux-gnu"
312s   .. ..$ system        : chr "s390x, linux-gnu"
312s   .. ..$ status        : chr ""
312s   .. ..$ major         : chr "4"
312s   .. ..$ minor         : chr "3.3"
312s   .. ..$ year          : chr "2024"
312s   .. ..$ month         : chr "02"
312s   .. ..$ day           : chr "29"
312s   .. ..$ svn rev       : chr "86002"
312s   .. ..$ language      : chr "R"
312s   .. ..$ version.string: chr "R version 4.3.3 (2024-02-29)"
312s   .. ..$ nickname      : chr "Angel Food Cake"
312s   .. ..$ os.type       : chr "unix"
312s   ..$ system :List of 8
312s   .. ..$ sysname       : chr "Linux"
312s   .. ..$ release       : chr "6.8.0-20-generic"
312s   .. ..$ version       : chr "#20-Ubuntu SMP Mon Mar 18 10:49:25 UTC 2024"
312s   .. ..$ nodename      : chr "autopkgtest"
312s   .. ..$ machine       : chr "s390x"
312s   .. ..$ login         : chr "ubuntu"
312s   .. ..$ user          : chr "ubuntu"
312s   .. ..$ effective_user: chr "ubuntu"
312s   ..$ libs   : chr [1:3] "/usr/local/lib/R/site-library" "/usr/lib/R/site-library" "/usr/lib/R/library"
312s   ..$ pkgs   : NULL
312s   ..$ pwd    : chr "/tmp/autopkgtest.7MbdOA/autopkgtest_tmp/tests"
312s   ..$ process:List of 1
312s   .. ..$ pid: int 2336
312s  - attr(*, "options")=List of 35
312s   ..$ worker          : chr "localhost"
312s   .. ..- attr(*, "localhost")= logi TRUE
312s   ..$ master          : chr "localhost"
312s   ..$ port            : int 11434
312s   ..$ connectTimeout  : num 120
312s   ..$ timeout         : num 2592000
312s   ..$ rscript         : chr "'/usr/lib/R/bin/Rscript'"
312s   ..$ homogeneous     : logi TRUE
312s   ..$ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
312s   ..$ rscript_envs    : NULL
312s   ..$ rscript_libs    : NULL
312s   ..$ rscript_startup : NULL
312s   ..$ rscript_sh      : chr "sh"
312s   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s   ..$ methods         : logi TRUE
312s   ..$ socketOptions   : chr "no-delay"
312s   ..$ useXDR          : logi FALSE
312s   ..$ outfile         : chr "/dev/null"
312s   ..$ renice          : int NA
312s   ..$ rshcmd          : NULL
312s   ..$ user            : chr(0) 
312s   ..$ revtunnel       : logi FALSE
312s   ..$ rshlogfile      : NULL
312s   ..$ rshopts         : chr(0) 
312s   ..$ rank            : int 0
312s   ..$ manual          : logi FALSE
312s   ..$ dryrun          : logi FALSE
312s   ..$ quiet           : logi FALSE
312s   ..$ setup_strategy  : chr "parallel"
312s   ..$ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s   ..$ rshcmd_label    : NULL
312s   ..$ rsh_call        : NULL
312s   ..$ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s   ..$ localMachine    : logi TRUE
312s   ..$ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
312s     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
312s         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
312s         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
312s     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
312s         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
312s         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
312s         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
312s         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
312s         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
312s         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
312s     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
312s         "parallel"), action = c("launch", "options"), verbose = FALSE)  
312s   ..$ arguments       :List of 28
312s   .. ..$ worker          : chr "localhost"
312s   .. ..$ master          : NULL
312s   .. ..$ port            : int 11434
312s   .. ..$ connectTimeout  : num 120
312s   .. ..$ timeout         : num 2592000
312s   .. ..$ rscript         : NULL
312s   .. ..$ homogeneous     : NULL
312s   .. ..$ rscript_args    : NULL
312s   .. ..$ rscript_envs    : NULL
312s   .. ..$ rscript_libs    : NULL
312s   .. ..$ rscript_startup : NULL
312s   .. ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
312s   .. ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s   .. ..$ methods         : logi TRUE
312s   .. ..$ socketOptions   : chr "no-delay"
312s   .. ..$ useXDR          : logi FALSE
312s   .. ..$ outfile         : chr "/dev/null"
312s   .. ..$ renice          : int NA
312s   .. ..$ rshcmd          : NULL
312s   .. ..$ user            : NULL
312s   .. ..$ revtunnel       : logi NA
312s   .. ..$ rshlogfile      : NULL
312s   .. ..$ rshopts         : NULL
312s   .. ..$ rank            : int 1
312s   .. ..$ manual          : logi FALSE
312s   .. ..$ dryrun          : logi FALSE
312s   .. ..$ quiet           : logi FALSE
312s   .. ..$ setup_strategy  : chr "parallel"
312s   ..- attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
312s  - attr(*, "class")= chr [1:2] "RichSOCKnode" "SOCK0node"
312s > stopifnot(isTRUE(attr(node[["host"]], "localhost")))
312s > parallel::stopCluster(cl)
312s > 
312s > 
312s > message("- makeClusterPSOCK() - useXDR = TRUE/FALSE")
312s > 
312s > for (xdr in c(TRUE, FALSE)) {
312s +   cl <- makeClusterPSOCK(1L, useXDR = xdr)
312s +   node <- cl[[1]]
312s +   stopifnot(
312s +     is.list(node),
312s +     inherits(node, if (xdr) "SOCKnode" else "SOCK0node"),
312s +     "session_info" %in% names(node)
312s +   )
312s +   si <- node[["session_info"]]
312s +   stopifnot(is.list(si))
312s +   parallel::stopCluster(cl)
312s + }
312s - makeClusterPSOCK() - useXDR = TRUE/FALSE
312s [01:13:47.909] [local output] makeClusterPSOCK() ...
312s [01:13:47.912] [local output] Workers: [n = 1] ‘localhost’
312s [01:13:47.913] [local output] Base port: 11312
312s [01:13:47.913] [local output] Getting setup options for 1 cluster nodes ...
312s [01:13:47.913] [local output]  - Node 1 of 1 ...
312s [01:13:47.914] [local output] localMachine=TRUE => revtunnel=FALSE
312s 
312s [01:13:47.914] [local output] Rscript port: 11312
312s 
312s [01:13:47.914] [local output] Getting setup options for 1 cluster nodes ... done
312s [01:13:47.915] [local output]  - Parallel setup requested for some PSOCK nodes
312s [01:13:47.915] [local output] Setting up PSOCK nodes in parallel
312s [01:13:47.915] List of 36
312s [01:13:47.915]  $ worker          : chr "localhost"
312s [01:13:47.915]   ..- attr(*, "localhost")= logi TRUE
312s [01:13:47.915]  $ master          : chr "localhost"
312s [01:13:47.915]  $ port            : int 11312
312s [01:13:47.915]  $ connectTimeout  : num 120
312s [01:13:47.915]  $ timeout         : num 2592000
312s [01:13:47.915]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
312s [01:13:47.915]  $ homogeneous     : logi TRUE
312s [01:13:47.915]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
312s [01:13:47.915]  $ rscript_envs    : NULL
312s [01:13:47.915]  $ rscript_libs    : NULL
312s [01:13:47.915]  $ rscript_startup : NULL
312s [01:13:47.915]  $ rscript_sh      : chr "sh"
312s [01:13:47.915]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s [01:13:47.915]  $ methods         : logi TRUE
312s [01:13:47.915]  $ socketOptions   : chr "no-delay"
312s [01:13:47.915]  $ useXDR          : logi TRUE
312s [01:13:47.915]  $ outfile         : chr "/dev/null"
312s [01:13:47.915]  $ renice          : int NA
312s [01:13:47.915]  $ rshcmd          : NULL
312s [01:13:47.915]  $ user            : chr(0) 
312s [01:13:47.915]  $ revtunnel       : logi FALSE
312s [01:13:47.915]  $ rshlogfile      : NULL
312s [01:13:47.915]  $ rshopts         : chr(0) 
312s [01:13:47.915]  $ rank            : int 1
312s [01:13:47.915]  $ manual          : logi FALSE
312s [01:13:47.915]  $ dryrun          : logi FALSE
312s [01:13:47.915]  $ quiet           : logi FALSE
312s [01:13:47.915]  $ setup_strategy  : chr "parallel"
312s [01:13:47.915]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s [01:13:47.915]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f372ecc5a0.pid"
312s [01:13:47.915]  $ rshcmd_label    : NULL
312s [01:13:47.915]  $ rsh_call        : NULL
312s [01:13:47.915]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
312s [01:13:47.915]  $ localMachine    : logi TRUE
312s [01:13:47.915]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
312s [01:13:47.915]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
312s [01:13:47.915]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
312s [01:13:47.915]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
312s [01:13:47.915]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
312s [01:13:47.915]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
312s [01:13:47.915]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
312s [01:13:47.915]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
312s [01:13:47.915]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
312s [01:13:47.915]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
312s [01:13:47.915]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
312s [01:13:47.915]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
312s [01:13:47.915]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
312s [01:13:47.915]  $ arguments       :List of 28
312s [01:13:47.915]   ..$ worker          : chr "localhost"
312s [01:13:47.915]   ..$ master          : NULL
312s [01:13:47.915]   ..$ port            : int 11312
312s [01:13:47.915]   ..$ connectTimeout  : num 120
312s [01:13:47.915]   ..$ timeout         : num 2592000
312s [01:13:47.915]   ..$ rscript         : NULL
312s [01:13:47.915]   ..$ homogeneous     : NULL
312s [01:13:47.915]   ..$ rscript_args    : NULL
312s [01:13:47.915]   ..$ rscript_envs    : NULL
312s [01:13:47.915]   ..$ rscript_libs    : NULL
312s [01:13:47.915]   ..$ rscript_startup : NULL
312s [01:13:47.915]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
312s [01:13:47.915]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
312s [01:13:47.915]   ..$ methods         : logi TRUE
312s [01:13:47.915]   ..$ socketOptions   : chr "no-delay"
312s [01:13:47.915]   ..$ useXDR          : logi TRUE
312s [01:13:47.915]   ..$ outfile         : chr "/dev/null"
312s [01:13:47.915]   ..$ renice          : int NA
312s [01:13:47.915]   ..$ rshcmd          : NULL
312s [01:13:47.915]   ..$ user            : NULL
312s [01:13:47.915]   ..$ revtunnel       : logi NA
312s [01:13:47.915]   ..$ rshlogfile      : NULL
312s [01:13:47.915]   ..$ rshopts         : NULL
312s [01:13:47.915]   ..$ rank            : int 1
312s [01:13:47.915]   ..$ manual          : logi FALSE
312s [01:13:47.915]   ..$ dryrun          : logi FALSE
312s [01:13:47.915]   ..$ quiet           : logi FALSE
312s [01:13:47.915]   ..$ setup_strategy  : chr "parallel"
312s [01:13:47.915]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
312s [01:13:47.935] [local output] System call to launch all workers:
312s [01:13:47.935] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f372ecc5a0.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11312 OUT=/dev/null TIMEOUT=2592000 XDR=TRUE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
312s [01:13:47.935] [local output] Starting PSOCK main server
312s [01:13:47.936] [local output] Workers launched
312s [01:13:47.936] [local output] Waiting for workers to connect back
312s [01:13:47.938]  - [local output] 0 workers out of 1 ready
313s [01:13:48.153]  - [local output] 0 workers out of 1 ready
313s [01:13:48.155]  - [local output] 1 workers out of 1 ready
313s [01:13:48.155] [local output] Launching of workers completed
313s [01:13:48.155] [local output] Collecting session information from workers
313s [01:13:48.156] [local output]  - Worker #1 of 1
313s [01:13:48.156] [local output] makeClusterPSOCK() ... done
313s [01:13:48.157] [local output] makeClusterPSOCK() ...
313s [01:13:48.169] [local output] Workers: [n = 1] ‘localhost’
313s [01:13:48.170] [local output] Base port: 11574
313s [01:13:48.170] [local output] Getting setup options for 1 cluster nodes ...
313s [01:13:48.170] [local output]  - Node 1 of 1 ...
313s [01:13:48.171] [local output] localMachine=TRUE => revtunnel=FALSE
313s 
313s [01:13:48.171] [local output] Rscript port: 11574
313s 
313s [01:13:48.172] [local output] Getting setup options for 1 cluster nodes ... done
313s [01:13:48.172] [local output]  - Parallel setup requested for some PSOCK nodes
313s [01:13:48.172] [local output] Setting up PSOCK nodes in parallel
313s [01:13:48.173] List of 36
313s [01:13:48.173]  $ worker          : chr "localhost"
313s [01:13:48.173]   ..- attr(*, "localhost")= logi TRUE
313s [01:13:48.173]  $ master          : chr "localhost"
313s [01:13:48.173]  $ port            : int 11574
313s [01:13:48.173]  $ connectTimeout  : num 120
313s [01:13:48.173]  $ timeout         : num 2592000
313s [01:13:48.173]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
313s [01:13:48.173]  $ homogeneous     : logi TRUE
313s [01:13:48.173]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
313s [01:13:48.173]  $ rscript_envs    : NULL
313s [01:13:48.173]  $ rscript_libs    : NULL
313s [01:13:48.173]  $ rscript_startup : NULL
313s [01:13:48.173]  $ rscript_sh      : chr "sh"
313s [01:13:48.173]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.173]  $ methods         : logi TRUE
313s [01:13:48.173]  $ socketOptions   : chr "no-delay"
313s [01:13:48.173]  $ useXDR          : logi FALSE
313s [01:13:48.173]  $ outfile         : chr "/dev/null"
313s [01:13:48.173]  $ renice          : int NA
313s [01:13:48.173]  $ rshcmd          : NULL
313s [01:13:48.173]  $ user            : chr(0) 
313s [01:13:48.173]  $ revtunnel       : logi FALSE
313s [01:13:48.173]  $ rshlogfile      : NULL
313s [01:13:48.173]  $ rshopts         : chr(0) 
313s [01:13:48.173]  $ rank            : int 1
313s [01:13:48.173]  $ manual          : logi FALSE
313s [01:13:48.173]  $ dryrun          : logi FALSE
313s [01:13:48.173]  $ quiet           : logi FALSE
313s [01:13:48.173]  $ setup_strategy  : chr "parallel"
313s [01:13:48.173]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.173]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f36a1c6684.pid"
313s [01:13:48.173]  $ rshcmd_label    : NULL
313s [01:13:48.173]  $ rsh_call        : NULL
313s [01:13:48.173]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.173]  $ localMachine    : logi TRUE
313s [01:13:48.173]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
313s [01:13:48.173]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
313s [01:13:48.173]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
313s [01:13:48.173]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
313s [01:13:48.173]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
313s [01:13:48.173]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
313s [01:13:48.173]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
313s [01:13:48.173]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
313s [01:13:48.173]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
313s [01:13:48.173]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
313s [01:13:48.173]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
313s [01:13:48.173]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
313s [01:13:48.173]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
313s [01:13:48.173]  $ arguments       :List of 28
313s [01:13:48.173]   ..$ worker          : chr "localhost"
313s [01:13:48.173]   ..$ master          : NULL
313s [01:13:48.173]   ..$ port            : int 11574
313s [01:13:48.173]   ..$ connectTimeout  : num 120
313s [01:13:48.173]   ..$ timeout         : num 2592000
313s [01:13:48.173]   ..$ rscript         : NULL
313s [01:13:48.173]   ..$ homogeneous     : NULL
313s [01:13:48.173]   ..$ rscript_args    : NULL
313s [01:13:48.173]   ..$ rscript_envs    : NULL
313s [01:13:48.173]   ..$ rscript_libs    : NULL
313s [01:13:48.173]   ..$ rscript_startup : NULL
313s [01:13:48.173]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
313s [01:13:48.173]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.173]   ..$ methods         : logi TRUE
313s [01:13:48.173]   ..$ socketOptions   : chr "no-delay"
313s [01:13:48.173]   ..$ useXDR          : logi FALSE
313s [01:13:48.173]   ..$ outfile         : chr "/dev/null"
313s [01:13:48.173]   ..$ renice          : int NA
313s [01:13:48.173]   ..$ rshcmd          : NULL
313s [01:13:48.173]   ..$ user            : NULL
313s [01:13:48.173]   ..$ revtunnel       : logi NA
313s [01:13:48.173]   ..$ rshlogfile      : NULL
313s [01:13:48.173]   ..$ rshopts         : NULL
313s [01:13:48.173]   ..$ rank            : int 1
313s [01:13:48.173]   ..$ manual          : logi FALSE
313s [01:13:48.173]   ..$ dryrun          : logi FALSE
313s [01:13:48.173]   ..$ quiet           : logi FALSE
313s [01:13:48.173]   ..$ setup_strategy  : chr "parallel"
313s [01:13:48.173]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
313s [01:13:48.215] [local output] System call to launch all workers:
313s [01:13:48.215] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f36a1c6684.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11574 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
313s [01:13:48.215] [local output] Starting PSOCK main server
313s [01:13:48.216] [local output] Workers launched
313s [01:13:48.217] [local output] Waiting for workers to connect back
313s [01:13:48.218]  - [local output] 0 workers out of 1 ready
313s [01:13:48.413]  - [local output] 0 workers out of 1 ready
313s [01:13:48.414]  - [local output] 1 workers out of 1 ready
313s [01:13:48.414] [local output] Launching of workers completed
313s [01:13:48.415] [local output] Collecting session information from workers
313s [01:13:48.415] [local output]  - Worker #1 of 1
313s [01:13:48.416] [local output] makeClusterPSOCK() ... done
313s - makeClusterPSOCK() - argument 'socketOptions'
313s [01:13:48.430] [local output] makeClusterPSOCK() ...
313s > 
313s > message("- makeClusterPSOCK() - argument 'socketOptions'")
313s > 
313s > for (value in list(NULL, "NULL", "no-delay")) {
313s +   cl <- makeClusterPSOCK(1L, socketOptions = value)
313s +   y <- parallel::clusterEvalQ(cl, 42L)[[1]]
313s +   stopifnot(identical(y, 42L))
313s +   parallel::stopCluster(cl)
313s + }
313s [01:13:48.433] [local output] Workers: [n = 1] ‘localhost’
313s [01:13:48.434] [local output] Base port: 11192
313s [01:13:48.434] [local output] Getting setup options for 1 cluster nodes ...
313s [01:13:48.434] [local output]  - Node 1 of 1 ...
313s [01:13:48.435] [local output] localMachine=TRUE => revtunnel=FALSE
313s 
313s [01:13:48.435] [local output] Rscript port: 11192
313s 
313s [01:13:48.436] [local output] Getting setup options for 1 cluster nodes ... done
313s [01:13:48.436] [local output]  - Parallel setup requested for some PSOCK nodes
313s [01:13:48.436] [local output] Setting up PSOCK nodes in parallel
313s [01:13:48.440] List of 36
313s [01:13:48.440]  $ worker          : chr "localhost"
313s [01:13:48.440]   ..- attr(*, "localhost")= logi TRUE
313s [01:13:48.440]  $ master          : chr "localhost"
313s [01:13:48.440]  $ port            : int 11192
313s [01:13:48.440]  $ connectTimeout  : num 120
313s [01:13:48.440]  $ timeout         : num 2592000
313s [01:13:48.440]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
313s [01:13:48.440]  $ homogeneous     : logi TRUE
313s [01:13:48.440]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
313s [01:13:48.440]  $ rscript_envs    : NULL
313s [01:13:48.440]  $ rscript_libs    : NULL
313s [01:13:48.440]  $ rscript_startup : NULL
313s [01:13:48.440]  $ rscript_sh      : chr "sh"
313s [01:13:48.440]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.440]  $ methods         : logi TRUE
313s [01:13:48.440]  $ socketOptions   : NULL
313s [01:13:48.440]  $ useXDR          : logi FALSE
313s [01:13:48.440]  $ outfile         : chr "/dev/null"
313s [01:13:48.440]  $ renice          : int NA
313s [01:13:48.440]  $ rshcmd          : NULL
313s [01:13:48.440]  $ user            : chr(0) 
313s [01:13:48.440]  $ revtunnel       : logi FALSE
313s [01:13:48.440]  $ rshlogfile      : NULL
313s [01:13:48.440]  $ rshopts         : chr(0) 
313s [01:13:48.440]  $ rank            : int 1
313s [01:13:48.440]  $ manual          : logi FALSE
313s [01:13:48.440]  $ dryrun          : logi FALSE
313s [01:13:48.440]  $ quiet           : logi FALSE
313s [01:13:48.440]  $ setup_strategy  : chr "parallel"
313s [01:13:48.440]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.440]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35929958.pid"
313s [01:13:48.440]  $ rshcmd_label    : NULL
313s [01:13:48.440]  $ rsh_call        : NULL
313s [01:13:48.440]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.440]  $ localMachine    : logi TRUE
313s [01:13:48.440]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
313s [01:13:48.440]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
313s [01:13:48.440]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
313s [01:13:48.440]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
313s [01:13:48.440]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
313s [01:13:48.440]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
313s [01:13:48.440]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
313s [01:13:48.440]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
313s [01:13:48.440]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
313s [01:13:48.440]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
313s [01:13:48.440]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
313s [01:13:48.440]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
313s [01:13:48.440]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
313s [01:13:48.440]  $ arguments       :List of 28
313s [01:13:48.440]   ..$ worker          : chr "localhost"
313s [01:13:48.440]   ..$ master          : NULL
313s [01:13:48.440]   ..$ port            : int 11192
313s [01:13:48.440]   ..$ connectTimeout  : num 120
313s [01:13:48.440]   ..$ timeout         : num 2592000
313s [01:13:48.440]   ..$ rscript         : NULL
313s [01:13:48.440]   ..$ homogeneous     : NULL
313s [01:13:48.440]   ..$ rscript_args    : NULL
313s [01:13:48.440]   ..$ rscript_envs    : NULL
313s [01:13:48.440]   ..$ rscript_libs    : NULL
313s [01:13:48.440]   ..$ rscript_startup : NULL
313s [01:13:48.440]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
313s [01:13:48.440]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.440]   ..$ methods         : logi TRUE
313s [01:13:48.440]   ..$ socketOptions   : NULL
313s [01:13:48.440]   ..$ useXDR          : logi FALSE
313s [01:13:48.440]   ..$ outfile         : chr "/dev/null"
313s [01:13:48.440]   ..$ renice          : int NA
313s [01:13:48.440]   ..$ rshcmd          : NULL
313s [01:13:48.440]   ..$ user            : NULL
313s [01:13:48.440]   ..$ revtunnel       : logi NA
313s [01:13:48.440]   ..$ rshlogfile      : NULL
313s [01:13:48.440]   ..$ rshopts         : NULL
313s [01:13:48.440]   ..$ rank            : int 1
313s [01:13:48.440]   ..$ manual          : logi FALSE
313s [01:13:48.440]   ..$ dryrun          : logi FALSE
313s [01:13:48.440]   ..$ quiet           : logi FALSE
313s [01:13:48.440]   ..$ setup_strategy  : chr "parallel"
313s [01:13:48.440]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
313s [01:13:48.474] [local output] System call to launch all workers:
313s [01:13:48.474] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35929958.pid")), silent = TRUE)' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11192 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
313s [01:13:48.475] [local output] Starting PSOCK main server
313s [01:13:48.476] [local output] Workers launched
313s [01:13:48.477] [local output] Waiting for workers to connect back
313s [01:13:48.477]  - [local output] 0 workers out of 1 ready
313s [01:13:48.662]  - [local output] 0 workers out of 1 ready
313s [01:13:48.663]  - [local output] 1 workers out of 1 ready
313s [01:13:48.663] [local output] Launching of workers completed
313s [01:13:48.663] [local output] Collecting session information from workers
313s [01:13:48.664] [local output]  - Worker #1 of 1
313s [01:13:48.664] [local output] makeClusterPSOCK() ... done
313s [01:13:48.665] [local output] makeClusterPSOCK() ...
313s [01:13:48.678] [local output] Workers: [n = 1] ‘localhost’
313s [01:13:48.678] [local output] Base port: 11594
313s [01:13:48.678] [local output] Getting setup options for 1 cluster nodes ...
313s [01:13:48.679] [local output]  - Node 1 of 1 ...
313s [01:13:48.679] [local output] localMachine=TRUE => revtunnel=FALSE
313s 
313s [01:13:48.680] [local output] Rscript port: 11594
313s 
313s [01:13:48.680] [local output] Getting setup options for 1 cluster nodes ... done
313s [01:13:48.680] [local output]  - Parallel setup requested for some PSOCK nodes
313s [01:13:48.680] [local output] Setting up PSOCK nodes in parallel
313s [01:13:48.680] List of 36
313s [01:13:48.680]  $ worker          : chr "localhost"
313s [01:13:48.680]   ..- attr(*, "localhost")= logi TRUE
313s [01:13:48.680]  $ master          : chr "localhost"
313s [01:13:48.680]  $ port            : int 11594
313s [01:13:48.680]  $ connectTimeout  : num 120
313s [01:13:48.680]  $ timeout         : num 2592000
313s [01:13:48.680]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
313s [01:13:48.680]  $ homogeneous     : logi TRUE
313s [01:13:48.680]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
313s [01:13:48.680]  $ rscript_envs    : NULL
313s [01:13:48.680]  $ rscript_libs    : NULL
313s [01:13:48.680]  $ rscript_startup : NULL
313s [01:13:48.680]  $ rscript_sh      : chr "sh"
313s [01:13:48.680]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.680]  $ methods         : logi TRUE
313s [01:13:48.680]  $ socketOptions   : NULL
313s [01:13:48.680]  $ useXDR          : logi FALSE
313s [01:13:48.680]  $ outfile         : chr "/dev/null"
313s [01:13:48.680]  $ renice          : int NA
313s [01:13:48.680]  $ rshcmd          : NULL
313s [01:13:48.680]  $ user            : chr(0) 
313s [01:13:48.680]  $ revtunnel       : logi FALSE
313s [01:13:48.680]  $ rshlogfile      : NULL
313s [01:13:48.680]  $ rshopts         : chr(0) 
313s [01:13:48.680]  $ rank            : int 1
313s [01:13:48.680]  $ manual          : logi FALSE
313s [01:13:48.680]  $ dryrun          : logi FALSE
313s [01:13:48.680]  $ quiet           : logi FALSE
313s [01:13:48.680]  $ setup_strategy  : chr "parallel"
313s [01:13:48.680]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.680]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f345c7714c.pid"
313s [01:13:48.680]  $ rshcmd_label    : NULL
313s [01:13:48.680]  $ rsh_call        : NULL
313s [01:13:48.680]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.680]  $ localMachine    : logi TRUE
313s [01:13:48.680]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
313s [01:13:48.680]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
313s [01:13:48.680]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
313s [01:13:48.680]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
313s [01:13:48.680]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
313s [01:13:48.680]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
313s [01:13:48.680]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
313s [01:13:48.680]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
313s [01:13:48.680]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
313s [01:13:48.680]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
313s [01:13:48.680]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
313s [01:13:48.680]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
313s [01:13:48.680]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
313s [01:13:48.680]  $ arguments       :List of 28
313s [01:13:48.680]   ..$ worker          : chr "localhost"
313s [01:13:48.680]   ..$ master          : NULL
313s [01:13:48.680]   ..$ port            : int 11594
313s [01:13:48.680]   ..$ connectTimeout  : num 120
313s [01:13:48.680]   ..$ timeout         : num 2592000
313s [01:13:48.680]   ..$ rscript         : NULL
313s [01:13:48.680]   ..$ homogeneous     : NULL
313s [01:13:48.680]   ..$ rscript_args    : NULL
313s [01:13:48.680]   ..$ rscript_envs    : NULL
313s [01:13:48.680]   ..$ rscript_libs    : NULL
313s [01:13:48.680]   ..$ rscript_startup : NULL
313s [01:13:48.680]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
313s [01:13:48.680]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.680]   ..$ methods         : logi TRUE
313s [01:13:48.680]   ..$ socketOptions   : chr "NULL"
313s [01:13:48.680]   ..$ useXDR          : logi FALSE
313s [01:13:48.680]   ..$ outfile         : chr "/dev/null"
313s [01:13:48.680]   ..$ renice          : int NA
313s [01:13:48.680]   ..$ rshcmd          : NULL
313s [01:13:48.680]   ..$ user            : NULL
313s [01:13:48.680]   ..$ revtunnel       : logi NA
313s [01:13:48.680]   ..$ rshlogfile      : NULL
313s [01:13:48.680]   ..$ rshopts         : NULL
313s [01:13:48.680]   ..$ rank            : int 1
313s [01:13:48.680]   ..$ manual          : logi FALSE
313s [01:13:48.680]   ..$ dryrun          : logi FALSE
313s [01:13:48.680]   ..$ quiet           : logi FALSE
313s [01:13:48.680]   ..$ setup_strategy  : chr "parallel"
313s [01:13:48.680]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
313s [01:13:48.715] [local output] System call to launch all workers:
313s [01:13:48.715] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f345c7714c.pid")), silent = TRUE)' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11594 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
313s [01:13:48.715] [local output] Starting PSOCK main server
313s [01:13:48.716] [local output] Workers launched
313s [01:13:48.716] [local output] Waiting for workers to connect back
313s [01:13:48.717]  - [local output] 0 workers out of 1 ready
313s [01:13:48.899]  - [local output] 0 workers out of 1 ready
313s [01:13:48.900]  - [local output] 1 workers out of 1 ready
313s [01:13:48.900] [local output] Launching of workers completed
313s [01:13:48.900] [local output] Collecting session information from workers
313s [01:13:48.901] [local output]  - Worker #1 of 1
313s [01:13:48.901] [local output] makeClusterPSOCK() ... done
313s [01:13:48.901] [local output] makeClusterPSOCK() ...
313s [01:13:48.908] [local output] Workers: [n = 1] ‘localhost’
313s [01:13:48.909] [local output] Base port: 11309
313s [01:13:48.909] [local output] Getting setup options for 1 cluster nodes ...
313s [01:13:48.909] [local output]  - Node 1 of 1 ...
313s [01:13:48.909] [local output] localMachine=TRUE => revtunnel=FALSE
313s 
313s [01:13:48.910] [local output] Rscript port: 11309
313s 
313s [01:13:48.910] [local output] Getting setup options for 1 cluster nodes ... done
313s [01:13:48.910] [local output]  - Parallel setup requested for some PSOCK nodes
313s [01:13:48.911] [local output] Setting up PSOCK nodes in parallel
313s [01:13:48.911] List of 36
313s [01:13:48.911]  $ worker          : chr "localhost"
313s [01:13:48.911]   ..- attr(*, "localhost")= logi TRUE
313s [01:13:48.911]  $ master          : chr "localhost"
313s [01:13:48.911]  $ port            : int 11309
313s [01:13:48.911]  $ connectTimeout  : num 120
313s [01:13:48.911]  $ timeout         : num 2592000
313s [01:13:48.911]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
313s [01:13:48.911]  $ homogeneous     : logi TRUE
313s [01:13:48.911]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
313s [01:13:48.911]  $ rscript_envs    : NULL
313s [01:13:48.911]  $ rscript_libs    : NULL
313s [01:13:48.911]  $ rscript_startup : NULL
313s [01:13:48.911]  $ rscript_sh      : chr "sh"
313s [01:13:48.911]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.911]  $ methods         : logi TRUE
313s [01:13:48.911]  $ socketOptions   : chr "no-delay"
313s [01:13:48.911]  $ useXDR          : logi FALSE
313s [01:13:48.911]  $ outfile         : chr "/dev/null"
313s [01:13:48.911]  $ renice          : int NA
313s [01:13:48.911]  $ rshcmd          : NULL
313s [01:13:48.911]  $ user            : chr(0) 
313s [01:13:48.911]  $ revtunnel       : logi FALSE
313s [01:13:48.911]  $ rshlogfile      : NULL
313s [01:13:48.911]  $ rshopts         : chr(0) 
313s [01:13:48.911]  $ rank            : int 1
313s [01:13:48.911]  $ manual          : logi FALSE
313s [01:13:48.911]  $ dryrun          : logi FALSE
313s [01:13:48.911]  $ quiet           : logi FALSE
313s [01:13:48.911]  $ setup_strategy  : chr "parallel"
313s [01:13:48.911]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.911]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f326a07221.pid"
313s [01:13:48.911]  $ rshcmd_label    : NULL
313s [01:13:48.911]  $ rsh_call        : NULL
313s [01:13:48.911]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
313s [01:13:48.911]  $ localMachine    : logi TRUE
313s [01:13:48.911]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
313s [01:13:48.911]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
313s [01:13:48.911]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
313s [01:13:48.911]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
313s [01:13:48.911]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
313s [01:13:48.911]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
313s [01:13:48.911]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
313s [01:13:48.911]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
313s [01:13:48.911]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
313s [01:13:48.911]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
313s [01:13:48.911]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
313s [01:13:48.911]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
313s [01:13:48.911]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
313s [01:13:48.911]  $ arguments       :List of 28
313s [01:13:48.911]   ..$ worker          : chr "localhost"
313s [01:13:48.911]   ..$ master          : NULL
313s [01:13:48.911]   ..$ port            : int 11309
313s [01:13:48.911]   ..$ connectTimeout  : num 120
313s [01:13:48.911]   ..$ timeout         : num 2592000
313s [01:13:48.911]   ..$ rscript         : NULL
313s [01:13:48.911]   ..$ homogeneous     : NULL
313s [01:13:48.911]   ..$ rscript_args    : NULL
313s [01:13:48.911]   ..$ rscript_envs    : NULL
313s [01:13:48.911]   ..$ rscript_libs    : NULL
313s [01:13:48.911]   ..$ rscript_startup : NULL
313s [01:13:48.911]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
313s [01:13:48.911]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
313s [01:13:48.911]   ..$ methods         : logi TRUE
313s [01:13:48.911]   ..$ socketOptions   : chr "no-delay"
313s [01:13:48.911]   ..$ useXDR          : logi FALSE
313s [01:13:48.911]   ..$ outfile         : chr "/dev/null"
313s [01:13:48.911]   ..$ renice          : int NA
313s [01:13:48.911]   ..$ rshcmd          : NULL
313s [01:13:48.911]   ..$ user            : NULL
313s [01:13:48.911]   ..$ revtunnel       : logi NA
313s [01:13:48.911]   ..$ rshlogfile      : NULL
313s [01:13:48.911]   ..$ rshopts         : NULL
313s [01:13:48.911]   ..$ rank            : int 1
313s [01:13:48.911]   ..$ manual          : logi FALSE
313s [01:13:48.911]   ..$ dryrun          : logi FALSE
313s [01:13:48.911]   ..$ quiet           : logi FALSE
313s [01:13:48.911]   ..$ setup_strategy  : chr "parallel"
313s [01:13:48.911]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
313s [01:13:48.950] [local output] System call to launch all workers:
313s [01:13:48.950] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f326a07221.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11309 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
313s [01:13:48.951] [local output] Starting PSOCK main server
313s [01:13:48.951] [local output] Workers launched
313s [01:13:48.952] [local output] Waiting for workers to connect back
313s [01:13:48.953]  - [local output] 0 workers out of 1 ready
314s [01:13:49.138]  - [local output] 0 workers out of 1 ready
314s [01:13:49.139]  - [local output] 1 workers out of 1 ready
314s [01:13:49.139] [local output] Launching of workers completed
314s [01:13:49.139] [local output] Collecting session information from workers
314s [01:13:49.139] [local output]  - Worker #1 of 1
314s [01:13:49.140] [local output] makeClusterPSOCK() ... done
314s > 
314s > 
314s > message("- makeClusterPSOCK() - argument 'rscript_startup'")
314s - makeClusterPSOCK() - argument 'rscript_startup'
314s > 
314s > for (value in list(NULL, "options(abc = 42L)", quote(options(abc = 42L)))) {
314s +   cl <- makeClusterPSOCK(1L, rscript_startup = value)
314s +   y <- parallel::clusterEvalQ(cl, getOption("abc", NA_integer_))[[1]]
314s +   stopifnot(is.integer(y), length(y) == 1L)
314s +   if (!is.null(value)) stopifnot(identical(y, 42L))
314s +   parallel::stopCluster(cl)
314s + }
314s [01:13:49.152] [local output] makeClusterPSOCK() ...
314s [01:13:49.164] [local output] Workers: [n = 1] ‘localhost’
314s [01:13:49.165] [local output] Base port: 11994
314s [01:13:49.165] [local output] Getting setup options for 1 cluster nodes ...
314s [01:13:49.165] [local output]  - Node 1 of 1 ...
314s [01:13:49.165] [local output] localMachine=TRUE => revtunnel=FALSE
314s 
314s [01:13:49.166] [local output] Rscript port: 11994
314s 
314s [01:13:49.166] [local output] Getting setup options for 1 cluster nodes ... done
314s [01:13:49.166] [local output]  - Parallel setup requested for some PSOCK nodes
314s [01:13:49.167] [local output] Setting up PSOCK nodes in parallel
314s [01:13:49.167] List of 36
314s [01:13:49.167]  $ worker          : chr "localhost"
314s [01:13:49.167]   ..- attr(*, "localhost")= logi TRUE
314s [01:13:49.167]  $ master          : chr "localhost"
314s [01:13:49.167]  $ port            : int 11994
314s [01:13:49.167]  $ connectTimeout  : num 120
314s [01:13:49.167]  $ timeout         : num 2592000
314s [01:13:49.167]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
314s [01:13:49.167]  $ homogeneous     : logi TRUE
314s [01:13:49.167]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
314s [01:13:49.167]  $ rscript_envs    : NULL
314s [01:13:49.167]  $ rscript_libs    : NULL
314s [01:13:49.167]  $ rscript_startup : NULL
314s [01:13:49.167]  $ rscript_sh      : chr "sh"
314s [01:13:49.167]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.167]  $ methods         : logi TRUE
314s [01:13:49.167]  $ socketOptions   : chr "no-delay"
314s [01:13:49.167]  $ useXDR          : logi FALSE
314s [01:13:49.167]  $ outfile         : chr "/dev/null"
314s [01:13:49.167]  $ renice          : int NA
314s [01:13:49.167]  $ rshcmd          : NULL
314s [01:13:49.167]  $ user            : chr(0) 
314s [01:13:49.167]  $ revtunnel       : logi FALSE
314s [01:13:49.167]  $ rshlogfile      : NULL
314s [01:13:49.167]  $ rshopts         : chr(0) 
314s [01:13:49.167]  $ rank            : int 1
314s [01:13:49.167]  $ manual          : logi FALSE
314s [01:13:49.167]  $ dryrun          : logi FALSE
314s [01:13:49.167]  $ quiet           : logi FALSE
314s [01:13:49.167]  $ setup_strategy  : chr "parallel"
314s [01:13:49.167]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.167]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3322d5dd4.pid"
314s [01:13:49.167]  $ rshcmd_label    : NULL
314s [01:13:49.167]  $ rsh_call        : NULL
314s [01:13:49.167]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.167]  $ localMachine    : logi TRUE
314s [01:13:49.167]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
314s [01:13:49.167]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
314s [01:13:49.167]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
314s [01:13:49.167]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
314s [01:13:49.167]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
314s [01:13:49.167]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
314s [01:13:49.167]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
314s [01:13:49.167]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
314s [01:13:49.167]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
314s [01:13:49.167]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
314s [01:13:49.167]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
314s [01:13:49.167]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
314s [01:13:49.167]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
314s [01:13:49.167]  $ arguments       :List of 28
314s [01:13:49.167]   ..$ worker          : chr "localhost"
314s [01:13:49.167]   ..$ master          : NULL
314s [01:13:49.167]   ..$ port            : int 11994
314s [01:13:49.167]   ..$ connectTimeout  : num 120
314s [01:13:49.167]   ..$ timeout         : num 2592000
314s [01:13:49.167]   ..$ rscript         : NULL
314s [01:13:49.167]   ..$ homogeneous     : NULL
314s [01:13:49.167]   ..$ rscript_args    : NULL
314s [01:13:49.167]   ..$ rscript_envs    : NULL
314s [01:13:49.167]   ..$ rscript_libs    : NULL
314s [01:13:49.167]   ..$ rscript_startup : NULL
314s [01:13:49.167]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
314s [01:13:49.167]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.167]   ..$ methods         : logi TRUE
314s [01:13:49.167]   ..$ socketOptions   : chr "no-delay"
314s [01:13:49.167]   ..$ useXDR          : logi FALSE
314s [01:13:49.167]   ..$ outfile         : chr "/dev/null"
314s [01:13:49.167]   ..$ renice          : int NA
314s [01:13:49.167]   ..$ rshcmd          : NULL
314s [01:13:49.167]   ..$ user            : NULL
314s [01:13:49.167]   ..$ revtunnel       : logi NA
314s [01:13:49.167]   ..$ rshlogfile      : NULL
314s [01:13:49.167]   ..$ rshopts         : NULL
314s [01:13:49.167]   ..$ rank            : int 1
314s [01:13:49.167]   ..$ manual          : logi FALSE
314s [01:13:49.167]   ..$ dryrun          : logi FALSE
314s [01:13:49.167]   ..$ quiet           : logi FALSE
314s [01:13:49.167]   ..$ setup_strategy  : chr "parallel"
314s [01:13:49.167]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
314s [01:13:49.195] [local output] System call to launch all workers:
314s [01:13:49.195] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3322d5dd4.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11994 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
314s [01:13:49.196] [local output] Starting PSOCK main server
314s [01:13:49.196] [local output] Workers launched
314s [01:13:49.196] [local output] Waiting for workers to connect back
314s [01:13:49.198]  - [local output] 0 workers out of 1 ready
314s [01:13:49.380]  - [local output] 0 workers out of 1 ready
314s [01:13:49.381]  - [local output] 1 workers out of 1 ready
314s [01:13:49.381] [local output] Launching of workers completed
314s [01:13:49.381] [local output] Collecting session information from workers
314s [01:13:49.382] [local output]  - Worker #1 of 1
314s [01:13:49.382] [local output] makeClusterPSOCK() ... done
314s [01:13:49.383] [local output] makeClusterPSOCK() ...
314s [01:13:49.397] [local output] Workers: [n = 1] ‘localhost’
314s [01:13:49.397] [local output] Base port: 11176
314s [01:13:49.397] [local output] Getting setup options for 1 cluster nodes ...
314s [01:13:49.397] [local output]  - Node 1 of 1 ...
314s [01:13:49.398] [local output] localMachine=TRUE => revtunnel=FALSE
314s 
314s [01:13:49.398] [local output] Rscript port: 11176
314s 
314s [01:13:49.399] [local output] Getting setup options for 1 cluster nodes ... done
314s [01:13:49.399] [local output]  - Parallel setup requested for some PSOCK nodes
314s [01:13:49.399] [local output] Setting up PSOCK nodes in parallel
314s [01:13:49.399] List of 36
314s [01:13:49.399]  $ worker          : chr "localhost"
314s [01:13:49.399]   ..- attr(*, "localhost")= logi TRUE
314s [01:13:49.399]  $ master          : chr "localhost"
314s [01:13:49.399]  $ port            : int 11176
314s [01:13:49.399]  $ connectTimeout  : num 120
314s [01:13:49.399]  $ timeout         : num 2592000
314s [01:13:49.399]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
314s [01:13:49.399]  $ homogeneous     : logi TRUE
314s [01:13:49.399]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
314s [01:13:49.399]  $ rscript_envs    : NULL
314s [01:13:49.399]  $ rscript_libs    : NULL
314s [01:13:49.399]  $ rscript_startup : chr [1:2] "-e" "'invisible({options(abc = 42L)})'"
314s [01:13:49.399]  $ rscript_sh      : chr "sh"
314s [01:13:49.399]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.399]  $ methods         : logi TRUE
314s [01:13:49.399]  $ socketOptions   : chr "no-delay"
314s [01:13:49.399]  $ useXDR          : logi FALSE
314s [01:13:49.399]  $ outfile         : chr "/dev/null"
314s [01:13:49.399]  $ renice          : int NA
314s [01:13:49.399]  $ rshcmd          : NULL
314s [01:13:49.399]  $ user            : chr(0) 
314s [01:13:49.399]  $ revtunnel       : logi FALSE
314s [01:13:49.399]  $ rshlogfile      : NULL
314s [01:13:49.399]  $ rshopts         : chr(0) 
314s [01:13:49.399]  $ rank            : int 1
314s [01:13:49.399]  $ manual          : logi FALSE
314s [01:13:49.399]  $ dryrun          : logi FALSE
314s [01:13:49.399]  $ quiet           : logi FALSE
314s [01:13:49.399]  $ setup_strategy  : chr "parallel"
314s [01:13:49.399]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.399]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f336f72576.pid"
314s [01:13:49.399]  $ rshcmd_label    : NULL
314s [01:13:49.399]  $ rsh_call        : NULL
314s [01:13:49.399]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.399]  $ localMachine    : logi TRUE
314s [01:13:49.399]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
314s [01:13:49.399]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
314s [01:13:49.399]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
314s [01:13:49.399]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
314s [01:13:49.399]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
314s [01:13:49.399]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
314s [01:13:49.399]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
314s [01:13:49.399]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
314s [01:13:49.399]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
314s [01:13:49.399]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
314s [01:13:49.399]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
314s [01:13:49.399]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
314s [01:13:49.399]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
314s [01:13:49.399]  $ arguments       :List of 28
314s [01:13:49.399]   ..$ worker          : chr "localhost"
314s [01:13:49.399]   ..$ master          : NULL
314s [01:13:49.399]   ..$ port            : int 11176
314s [01:13:49.399]   ..$ connectTimeout  : num 120
314s [01:13:49.399]   ..$ timeout         : num 2592000
314s [01:13:49.399]   ..$ rscript         : NULL
314s [01:13:49.399]   ..$ homogeneous     : NULL
314s [01:13:49.399]   ..$ rscript_args    : NULL
314s [01:13:49.399]   ..$ rscript_envs    : NULL
314s [01:13:49.399]   ..$ rscript_libs    : NULL
314s [01:13:49.399]   ..$ rscript_startup : chr "options(abc = 42L)"
314s [01:13:49.399]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
314s [01:13:49.399]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.399]   ..$ methods         : logi TRUE
314s [01:13:49.399]   ..$ socketOptions   : chr "no-delay"
314s [01:13:49.399]   ..$ useXDR          : logi FALSE
314s [01:13:49.399]   ..$ outfile         : chr "/dev/null"
314s [01:13:49.399]   ..$ renice          : int NA
314s [01:13:49.399]   ..$ rshcmd          : NULL
314s [01:13:49.399]   ..$ user            : NULL
314s [01:13:49.399]   ..$ revtunnel       : logi NA
314s [01:13:49.399]   ..$ rshlogfile      : NULL
314s [01:13:49.399]   ..$ rshopts         : NULL
314s [01:13:49.399]   ..$ rank            : int 1
314s [01:13:49.399]   ..$ manual          : logi FALSE
314s [01:13:49.399]   ..$ dryrun          : logi FALSE
314s [01:13:49.399]   ..$ quiet           : logi FALSE
314s [01:13:49.399]   ..$ setup_strategy  : chr "parallel"
314s [01:13:49.399]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
314s [01:13:49.430] [local output] System call to launch all workers:
314s [01:13:49.430] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f336f72576.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'invisible({options(abc = 42L)})' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11176 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
314s [01:13:49.430] [local output] Starting PSOCK main server
314s [01:13:49.431] [local output] Workers launched
314s [01:13:49.431] [local output] Waiting for workers to connect back
314s [01:13:49.433]  - [local output] 0 workers out of 1 ready
314s [01:13:49.624]  - [local output] 0 workers out of 1 ready
314s [01:13:49.625]  - [local output] 1 workers out of 1 ready
314s [01:13:49.625] [local output] Launching of workers completed
314s [01:13:49.625] [local output] Collecting session information from workers
314s [01:13:49.625] [local output]  - Worker #1 of 1
314s [01:13:49.626] [local output] makeClusterPSOCK() ... done
314s [01:13:49.626] [local output] makeClusterPSOCK() ...
314s [01:13:49.638] [local output] Workers: [n = 1] ‘localhost’
314s [01:13:49.639] [local output] Base port: 11668
314s [01:13:49.639] [local output] Getting setup options for 1 cluster nodes ...
314s [01:13:49.639] [local output]  - Node 1 of 1 ...
314s [01:13:49.639] [local output] localMachine=TRUE => revtunnel=FALSE
314s 
314s [01:13:49.640] [local output] Rscript port: 11668
314s 
314s [01:13:49.640] [local output] Getting setup options for 1 cluster nodes ... done
314s [01:13:49.640] [local output]  - Parallel setup requested for some PSOCK nodes
314s [01:13:49.641] [local output] Setting up PSOCK nodes in parallel
314s [01:13:49.641] List of 36
314s [01:13:49.641]  $ worker          : chr "localhost"
314s [01:13:49.641]   ..- attr(*, "localhost")= logi TRUE
314s [01:13:49.641]  $ master          : chr "localhost"
314s [01:13:49.641]  $ port            : int 11668
314s [01:13:49.641]  $ connectTimeout  : num 120
314s [01:13:49.641]  $ timeout         : num 2592000
314s [01:13:49.641]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
314s [01:13:49.641]  $ homogeneous     : logi TRUE
314s [01:13:49.641]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
314s [01:13:49.641]  $ rscript_envs    : NULL
314s [01:13:49.641]  $ rscript_libs    : NULL
314s [01:13:49.641]  $ rscript_startup : chr [1:2] "-e" "'invisible({options(abc = 42L)})'"
314s [01:13:49.641]  $ rscript_sh      : chr "sh"
314s [01:13:49.641]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.641]  $ methods         : logi TRUE
314s [01:13:49.641]  $ socketOptions   : chr "no-delay"
314s [01:13:49.641]  $ useXDR          : logi FALSE
314s [01:13:49.641]  $ outfile         : chr "/dev/null"
314s [01:13:49.641]  $ renice          : int NA
314s [01:13:49.641]  $ rshcmd          : NULL
314s [01:13:49.641]  $ user            : chr(0) 
314s [01:13:49.641]  $ revtunnel       : logi FALSE
314s [01:13:49.641]  $ rshlogfile      : NULL
314s [01:13:49.641]  $ rshopts         : chr(0) 
314s [01:13:49.641]  $ rank            : int 1
314s [01:13:49.641]  $ manual          : logi FALSE
314s [01:13:49.641]  $ dryrun          : logi FALSE
314s [01:13:49.641]  $ quiet           : logi FALSE
314s [01:13:49.641]  $ setup_strategy  : chr "parallel"
314s [01:13:49.641]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.641]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f37c2d1dcc.pid"
314s [01:13:49.641]  $ rshcmd_label    : NULL
314s [01:13:49.641]  $ rsh_call        : NULL
314s [01:13:49.641]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
314s [01:13:49.641]  $ localMachine    : logi TRUE
314s [01:13:49.641]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
314s [01:13:49.641]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
314s [01:13:49.641]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
314s [01:13:49.641]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
314s [01:13:49.641]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
314s [01:13:49.641]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
314s [01:13:49.641]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
314s [01:13:49.641]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
314s [01:13:49.641]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
314s [01:13:49.641]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
314s [01:13:49.641]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
314s [01:13:49.641]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
314s [01:13:49.641]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
314s [01:13:49.641]  $ arguments       :List of 28
314s [01:13:49.641]   ..$ worker          : chr "localhost"
314s [01:13:49.641]   ..$ master          : NULL
314s [01:13:49.641]   ..$ port            : int 11668
314s [01:13:49.641]   ..$ connectTimeout  : num 120
314s [01:13:49.641]   ..$ timeout         : num 2592000
314s [01:13:49.641]   ..$ rscript         : NULL
314s [01:13:49.641]   ..$ homogeneous     : NULL
314s [01:13:49.641]   ..$ rscript_args    : NULL
314s [01:13:49.641]   ..$ rscript_envs    : NULL
314s [01:13:49.641]   ..$ rscript_libs    : NULL
314s [01:13:49.641]   ..$ rscript_startup : language options(abc = 42L)
314s [01:13:49.641]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
314s [01:13:49.641]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
314s [01:13:49.641]   ..$ methods         : logi TRUE
314s [01:13:49.641]   ..$ socketOptions   : chr "no-delay"
314s [01:13:49.641]   ..$ useXDR          : logi FALSE
314s [01:13:49.641]   ..$ outfile         : chr "/dev/null"
314s [01:13:49.641]   ..$ renice          : int NA
314s [01:13:49.641]   ..$ rshcmd          : NULL
314s [01:13:49.641]   ..$ user            : NULL
314s [01:13:49.641]   ..$ revtunnel       : logi NA
314s [01:13:49.641]   ..$ rshlogfile      : NULL
314s [01:13:49.641]   ..$ rshopts         : NULL
314s [01:13:49.641]   ..$ rank            : int 1
314s [01:13:49.641]   ..$ manual          : logi FALSE
314s [01:13:49.641]   ..$ dryrun          : logi FALSE
314s [01:13:49.641]   ..$ quiet           : logi FALSE
314s [01:13:49.641]   ..$ setup_strategy  : chr "parallel"
314s [01:13:49.641]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
314s [01:13:49.672] [local output] System call to launch all workers:
314s [01:13:49.672] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f37c2d1dcc.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'invisible({options(abc = 42L)})' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11668 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
314s [01:13:49.673] [local output] Starting PSOCK main server
314s [01:13:49.673] [local output] Workers launched
314s [01:13:49.674] [local output] Waiting for workers to connect back
314s [01:13:49.675]  - [local output] 0 workers out of 1 ready
314s [01:13:49.866]  - [local output] 0 workers out of 1 ready
314s [01:13:49.867]  - [local output] 1 workers out of 1 ready
314s [01:13:49.867] [local output] Launching of workers completed
314s [01:13:49.867] [local output] Collecting session information from workers
314s [01:13:49.868] [local output]  - Worker #1 of 1
314s [01:13:49.868] [local output] makeClusterPSOCK() ... done
314s > 
314s > 
314s > message("- makeClusterPSOCK() - setup_strategy = TRUE/FALSE")
314s - makeClusterPSOCK() - setup_strategy = TRUE/FALSE
314s > 
314s > for (setup_strategy in c("sequential", "parallel")) {
314s +   dt <- system.time({
314s +     cl <- makeClusterPSOCK(2L, setup_strategy = setup_strategy)
314s +   })
314s +   print(dt)
314s +   print(cl)
314s +   parallel::stopCluster(cl)
314s + }
314s [01:13:49.922] [local output] makeClusterPSOCK() ...
314s Warning in checkNumberOfLocalWorkers(workers) :
314s   Careful, you are setting up 2 localhost parallel workers with only 1 CPU cores available for this R process (per ‘system’), which could result in a 200% load. The soft limit is set to 100%. Overusing the CPUs has negative impact on the current R process, but also on all other processes of yours and others running on the same machine. See help("parallelly.options", package = "parallelly") for how to override the soft and hard limits
314s [01:13:49.925] [local output] Workers: [n = 2] ‘localhost’, ‘localhost’
314s [01:13:49.926] [local output] Base port: 11926
314s [01:13:49.926] [local output] Getting setup options for 2 cluster nodes ...
314s [01:13:49.926] [local output]  - Node 1 of 2 ...
314s [01:13:49.927] [local output] localMachine=TRUE => revtunnel=FALSE
314s 
314s [01:13:49.927] [local output] Rscript port: 11926
314s 
314s [01:13:49.927] [local output]  - Node 2 of 2 ...
314s [01:13:49.928] [local output] localMachine=TRUE => revtunnel=FALSE
314s 
314s [01:13:49.928] [local output] Rscript port: 11926
314s 
314s [01:13:49.929] [local output] Getting setup options for 2 cluster nodes ... done
314s [01:13:49.929] [local output] Creating node 1 of 2 ...
314s [01:13:49.929] [local output] - setting up node
314s [01:13:49.929] [local output] - attempt #1 of 3
314s [01:13:49.929] [local output] Starting worker #1 on ‘localhost’: '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3112314d6.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11926 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
314s [01:13:49.930] [local output] - Exit code of system() call: 0
314s [01:13:49.930] [local output] Waiting for worker #1 on ‘localhost’ to connect back
315s [01:13:50.123] [local output] Connection with worker #1 on ‘localhost’ established
315s [01:13:50.123] [local output] Creating node 1 of 2 ... done
315s [01:13:50.123] [local output] Creating node 2 of 2 ...
315s [01:13:50.123] [local output] - setting up node
315s [01:13:50.123] [local output] - attempt #1 of 3
315s [01:13:50.123] [local output] Starting worker #2 on ‘localhost’: '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=2.parallelly.parent=2291.8f33cdec972.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11926 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=sequential
315s [01:13:50.124] [local output] - Exit code of system() call: 0
315s [01:13:50.125] [local output] Waiting for worker #2 on ‘localhost’ to connect back
315s [01:13:50.317] [local output] Connection with worker #2 on ‘localhost’ established
315s [01:13:50.317] [local output] Creating node 2 of 2 ... done
315s [01:13:50.317] [local output] Launching of workers completed
315s [01:13:50.318] [local output] Collecting session information from workers
315s [01:13:50.319] [local output]  - Worker #1 of 2
315s [01:13:50.319] [local output]  - Worker #2 of 2
315s [01:13:50.320] [local output] makeClusterPSOCK() ... done
315s    user  system elapsed 
315s   0.016   0.002   0.398 
315s Socket cluster with 2 nodes where 2 nodes are on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
315s [01:13:50.390] [local output] makeClusterPSOCK() ...
315s Warning in checkNumberOfLocalWorkers(workers) :
315s   Careful, you are setting up 2 localhost parallel workers with only 1 CPU cores available for this R process (per ‘system’), which could result in a 200% load. The soft limit is set to 100%. Overusing the CPUs has negative impact on the current R process, but also on all other processes of yours and others running on the same machine. See help("parallelly.options", package = "parallelly") for how to override the soft and hard limits
315s [01:13:50.393] [local output] Workers: [n = 2] ‘localhost’, ‘localhost’
315s [01:13:50.394] [local output] Base port: 11006
315s [01:13:50.394] [local output] Getting setup options for 2 cluster nodes ...
315s [01:13:50.394] [local output]  - Node 1 of 2 ...
315s [01:13:50.395] [local output] localMachine=TRUE => revtunnel=FALSE
315s 
315s [01:13:50.395] [local output] Rscript port: 11006
315s 
315s [01:13:50.396] [local output]  - Node 2 of 2 ...
315s [01:13:50.396] [local output] localMachine=TRUE => revtunnel=FALSE
315s 
315s [01:13:50.397] [local output] Rscript port: 11006
315s 
315s [01:13:50.397] [local output] Getting setup options for 2 cluster nodes ... done
315s [01:13:50.397] [local output]  - Parallel setup requested for some PSOCK nodes
315s [01:13:50.397] [local output] Setting up PSOCK nodes in parallel
315s [01:13:50.398] List of 36
315s [01:13:50.398]  $ worker          : chr "localhost"
315s [01:13:50.398]   ..- attr(*, "localhost")= logi TRUE
315s [01:13:50.398]  $ master          : chr "localhost"
315s [01:13:50.398]  $ port            : int 11006
315s [01:13:50.398]  $ connectTimeout  : num 120
315s [01:13:50.398]  $ timeout         : num 2592000
315s [01:13:50.398]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
315s [01:13:50.398]  $ homogeneous     : logi TRUE
315s [01:13:50.398]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
315s [01:13:50.398]  $ rscript_envs    : NULL
315s [01:13:50.398]  $ rscript_libs    : NULL
315s [01:13:50.398]  $ rscript_startup : NULL
315s [01:13:50.398]  $ rscript_sh      : chr "sh"
315s [01:13:50.398]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
315s [01:13:50.398]  $ methods         : logi TRUE
315s [01:13:50.398]  $ socketOptions   : chr "no-delay"
315s [01:13:50.398]  $ useXDR          : logi FALSE
315s [01:13:50.398]  $ outfile         : chr "/dev/null"
315s [01:13:50.398]  $ renice          : int NA
315s [01:13:50.398]  $ rshcmd          : NULL
315s [01:13:50.398]  $ user            : chr(0) 
315s [01:13:50.398]  $ revtunnel       : logi FALSE
315s [01:13:50.398]  $ rshlogfile      : NULL
315s [01:13:50.398]  $ rshopts         : chr(0) 
315s [01:13:50.398]  $ rank            : int 1
315s [01:13:50.398]  $ manual          : logi FALSE
315s [01:13:50.398]  $ dryrun          : logi FALSE
315s [01:13:50.398]  $ quiet           : logi FALSE
315s [01:13:50.398]  $ setup_strategy  : chr "parallel"
315s [01:13:50.398]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
315s [01:13:50.398]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f327609b11.pid"
315s [01:13:50.398]  $ rshcmd_label    : NULL
315s [01:13:50.398]  $ rsh_call        : NULL
315s [01:13:50.398]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
315s [01:13:50.398]  $ localMachine    : logi TRUE
315s [01:13:50.398]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
315s [01:13:50.398]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
315s [01:13:50.398]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
315s [01:13:50.398]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
315s [01:13:50.398]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
315s [01:13:50.398]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
315s [01:13:50.398]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
315s [01:13:50.398]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
315s [01:13:50.398]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
315s [01:13:50.398]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
315s [01:13:50.398]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
315s [01:13:50.398]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
315s [01:13:50.398]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
315s [01:13:50.398]  $ arguments       :List of 28
315s [01:13:50.398]   ..$ worker          : chr "localhost"
315s [01:13:50.398]   ..$ master          : NULL
315s [01:13:50.398]   ..$ port            : int 11006
315s [01:13:50.398]   ..$ connectTimeout  : num 120
315s [01:13:50.398]   ..$ timeout         : num 2592000
315s [01:13:50.398]   ..$ rscript         : NULL
315s [01:13:50.398]   ..$ homogeneous     : NULL
315s [01:13:50.398]   ..$ rscript_args    : NULL
315s [01:13:50.398]   ..$ rscript_envs    : NULL
315s [01:13:50.398]   ..$ rscript_libs    : NULL
315s [01:13:50.398]   ..$ rscript_startup : NULL
315s [01:13:50.398]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
315s [01:13:50.398]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
315s [01:13:50.398]   ..$ methods         : logi TRUE
315s [01:13:50.398]   ..$ socketOptions   : chr "no-delay"
315s [01:13:50.398]   ..$ useXDR          : logi FALSE
315s [01:13:50.398]   ..$ outfile         : chr "/dev/null"
315s [01:13:50.398]   ..$ renice          : int NA
315s [01:13:50.398]   ..$ rshcmd          : NULL
315s [01:13:50.398]   ..$ user            : NULL
315s [01:13:50.398]   ..$ revtunnel       : logi NA
315s [01:13:50.398]   ..$ rshlogfile      : NULL
315s [01:13:50.398]   ..$ rshopts         : NULL
315s [01:13:50.398]   ..$ rank            : int 1
315s [01:13:50.398]   ..$ manual          : logi FALSE
315s [01:13:50.398]   ..$ dryrun          : logi FALSE
315s [01:13:50.398]   ..$ quiet           : logi FALSE
315s [01:13:50.398]   ..$ setup_strategy  : chr "parallel"
315s [01:13:50.398]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
315s [01:13:50.418] [local output] System call to launch all workers:
315s [01:13:50.418] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f327609b11.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11006 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
315s [01:13:50.418] [local output] Starting PSOCK main server
315s [01:13:50.419] [local output] Workers launched
315s [01:13:50.419] [local output] Waiting for workers to connect back
315s [01:13:50.421]  - [local output] 0 workers out of 2 ready
315s [01:13:50.793]  - [local output] 0 workers out of 2 ready
315s [01:13:50.794]  - [local output] 1 workers out of 2 ready
315s [01:13:50.799]  - [local output] 1 workers out of 2 ready
315s [01:13:50.800]  - [local output] 2 workers out of 2 ready
315s [01:13:50.800] [local output] Launching of workers completed
315s [01:13:50.800] [local output] Collecting session information from workers
315s [01:13:50.801] [local output]  - Worker #1 of 2
315s [01:13:50.801] [local output]  - Worker #2 of 2
315s [01:13:50.802] [local output] makeClusterPSOCK() ... done
315s    user  system elapsed 
315s   0.029   0.001   0.412 
315s Socket cluster with 2 nodes where 2 nodes are on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
315s > 
315s > 
315s > message("- makeClusterPSOCK() - with and w/out validation")
315s > 
315s > cl <- makeClusterPSOCK(1L, validate = TRUE) ## default
315s - makeClusterPSOCK() - with and w/out validation
315s [01:13:50.815] [local output] makeClusterPSOCK() ...
315s [01:13:50.827] [local output] Workers: [n = 1] ‘localhost’
315s [01:13:50.828] [local output] Base port: 11218
315s [01:13:50.828] [local output] Getting setup options for 1 cluster nodes ...
315s [01:13:50.828] [local output]  - Node 1 of 1 ...
315s [01:13:50.828] [local output] localMachine=TRUE => revtunnel=FALSE
315s 
315s [01:13:50.829] [local output] Rscript port: 11218
315s 
315s [01:13:50.829] [local output] Getting setup options for 1 cluster nodes ... done
315s [01:13:50.829] [local output]  - Parallel setup requested for some PSOCK nodes
315s [01:13:50.830] [local output] Setting up PSOCK nodes in parallel
315s [01:13:50.830] List of 36
315s [01:13:50.830]  $ worker          : chr "localhost"
315s [01:13:50.830]   ..- attr(*, "localhost")= logi TRUE
315s [01:13:50.830]  $ master          : chr "localhost"
315s [01:13:50.830]  $ port            : int 11218
315s [01:13:50.830]  $ connectTimeout  : num 120
315s [01:13:50.830]  $ timeout         : num 2592000
315s [01:13:50.830]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
315s [01:13:50.830]  $ homogeneous     : logi TRUE
315s [01:13:50.830]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
315s [01:13:50.830]  $ rscript_envs    : NULL
315s [01:13:50.830]  $ rscript_libs    : NULL
315s [01:13:50.830]  $ rscript_startup : NULL
315s [01:13:50.830]  $ rscript_sh      : chr "sh"
315s [01:13:50.830]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
315s [01:13:50.830]  $ methods         : logi TRUE
315s [01:13:50.830]  $ socketOptions   : chr "no-delay"
315s [01:13:50.830]  $ useXDR          : logi FALSE
315s [01:13:50.830]  $ outfile         : chr "/dev/null"
315s [01:13:50.830]  $ renice          : int NA
315s [01:13:50.830]  $ rshcmd          : NULL
315s [01:13:50.830]  $ user            : chr(0) 
315s [01:13:50.830]  $ revtunnel       : logi FALSE
315s [01:13:50.830]  $ rshlogfile      : NULL
315s [01:13:50.830]  $ rshopts         : chr(0) 
315s [01:13:50.830]  $ rank            : int 1
315s [01:13:50.830]  $ manual          : logi FALSE
315s [01:13:50.830]  $ dryrun          : logi FALSE
315s [01:13:50.830]  $ quiet           : logi FALSE
315s [01:13:50.830]  $ setup_strategy  : chr "parallel"
315s [01:13:50.830]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
315s [01:13:50.830]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f37aa07e93.pid"
315s [01:13:50.830]  $ rshcmd_label    : NULL
315s [01:13:50.830]  $ rsh_call        : NULL
315s [01:13:50.830]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
315s [01:13:50.830]  $ localMachine    : logi TRUE
315s [01:13:50.830]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
315s [01:13:50.830]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
315s [01:13:50.830]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
315s [01:13:50.830]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
315s [01:13:50.830]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
315s [01:13:50.830]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
315s [01:13:50.830]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
315s [01:13:50.830]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
315s [01:13:50.830]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
315s [01:13:50.830]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
315s [01:13:50.830]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
315s [01:13:50.830]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
315s [01:13:50.830]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
315s [01:13:50.830]  $ arguments       :List of 28
315s [01:13:50.830]   ..$ worker          : chr "localhost"
315s [01:13:50.830]   ..$ master          : NULL
315s [01:13:50.830]   ..$ port            : int 11218
315s [01:13:50.830]   ..$ connectTimeout  : num 120
315s [01:13:50.830]   ..$ timeout         : num 2592000
315s [01:13:50.830]   ..$ rscript         : NULL
315s [01:13:50.830]   ..$ homogeneous     : NULL
315s [01:13:50.830]   ..$ rscript_args    : NULL
315s [01:13:50.830]   ..$ rscript_envs    : NULL
315s [01:13:50.830]   ..$ rscript_libs    : NULL
315s [01:13:50.830]   ..$ rscript_startup : NULL
315s [01:13:50.830]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
315s [01:13:50.830]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
315s [01:13:50.830]   ..$ methods         : logi TRUE
315s [01:13:50.830]   ..$ socketOptions   : chr "no-delay"
315s [01:13:50.830]   ..$ useXDR          : logi FALSE
315s [01:13:50.830]   ..$ outfile         : chr "/dev/null"
315s [01:13:50.830]   ..$ renice          : int NA
315s [01:13:50.830]   ..$ rshcmd          : NULL
315s [01:13:50.830]   ..$ user            : NULL
315s [01:13:50.830]   ..$ revtunnel       : logi NA
315s [01:13:50.830]   ..$ rshlogfile      : NULL
315s [01:13:50.830]   ..$ rshopts         : NULL
315s [01:13:50.830]   ..$ rank            : int 1
315s [01:13:50.830]   ..$ manual          : logi FALSE
315s [01:13:50.830]   ..$ dryrun          : logi FALSE
315s [01:13:50.830]   ..$ quiet           : logi FALSE
315s [01:13:50.830]   ..$ setup_strategy  : chr "parallel"
315s [01:13:50.830]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
315s [01:13:50.876] [local output] System call to launch all workers:
315s [01:13:50.876] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f37aa07e93.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11218 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
315s [01:13:50.877] [local output] Starting PSOCK main server
315s [01:13:50.877] [local output] Workers launched
315s [01:13:50.879] [local output] Waiting for workers to connect back
315s [01:13:50.879]  - [local output] 0 workers out of 1 ready
316s [01:13:51.066]  - [local output] 0 workers out of 1 ready
316s [01:13:51.067]  - [local output] 1 workers out of 1 ready
316s [01:13:51.067] [local output] Launching of workers completed
316s [01:13:51.067] [local output] Collecting session information from workers
316s [01:13:51.068] [local output]  - Worker #1 of 1
316s [01:13:51.068] [local output] makeClusterPSOCK() ... done
316s > node <- cl[[1]]
316s > stopifnot(
316s +   is.list(node),
316s +   inherits(node, if (useXDR) "SOCKnode" else "SOCK0node"),
316s +   "session_info" %in% names(node)
316s + )
316s > si <- node[["session_info"]]
316s > stopifnot(is.list(si))
316s > parallel::stopCluster(cl)
316s > 
316s > cl <- makeClusterPSOCK(1L, validate = FALSE)
316s [01:13:51.069] [local output] makeClusterPSOCK() ...
316s [01:13:51.078] [local output] Workers: [n = 1] ‘localhost’
316s [01:13:51.079] [local output] Base port: 11225
316s [01:13:51.079] [local output] Getting setup options for 1 cluster nodes ...
316s [01:13:51.079] [local output]  - Node 1 of 1 ...
316s [01:13:51.079] [local output] localMachine=TRUE => revtunnel=FALSE
316s 
316s [01:13:51.080] [local output] Rscript port: 11225
316s 
316s [01:13:51.080] [local output] Getting setup options for 1 cluster nodes ... done
316s [01:13:51.081] [local output]  - Parallel setup requested for some PSOCK nodes
316s [01:13:51.081] [local output] Setting up PSOCK nodes in parallel
316s [01:13:51.081] List of 36
316s [01:13:51.081]  $ worker          : chr "localhost"
316s [01:13:51.081]   ..- attr(*, "localhost")= logi TRUE
316s [01:13:51.081]  $ master          : chr "localhost"
316s [01:13:51.081]  $ port            : int 11225
316s [01:13:51.081]  $ connectTimeout  : num 120
316s [01:13:51.081]  $ timeout         : num 2592000
316s [01:13:51.081]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
316s [01:13:51.081]  $ homogeneous     : logi TRUE
316s [01:13:51.081]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
316s [01:13:51.081]  $ rscript_envs    : NULL
316s [01:13:51.081]  $ rscript_libs    : NULL
316s [01:13:51.081]  $ rscript_startup : NULL
316s [01:13:51.081]  $ rscript_sh      : chr "sh"
316s [01:13:51.081]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.081]  $ methods         : logi TRUE
316s [01:13:51.081]  $ socketOptions   : chr "no-delay"
316s [01:13:51.081]  $ useXDR          : logi FALSE
316s [01:13:51.081]  $ outfile         : chr "/dev/null"
316s [01:13:51.081]  $ renice          : int NA
316s [01:13:51.081]  $ rshcmd          : NULL
316s [01:13:51.081]  $ user            : chr(0) 
316s [01:13:51.081]  $ revtunnel       : logi FALSE
316s [01:13:51.081]  $ rshlogfile      : NULL
316s [01:13:51.081]  $ rshopts         : chr(0) 
316s [01:13:51.081]  $ rank            : int 1
316s [01:13:51.081]  $ manual          : logi FALSE
316s [01:13:51.081]  $ dryrun          : logi FALSE
316s [01:13:51.081]  $ quiet           : logi FALSE
316s [01:13:51.081]  $ setup_strategy  : chr "parallel"
316s [01:13:51.081]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.081]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3579ed20a.pid"
316s [01:13:51.081]  $ rshcmd_label    : NULL
316s [01:13:51.081]  $ rsh_call        : NULL
316s [01:13:51.081]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.081]  $ localMachine    : logi TRUE
316s [01:13:51.081]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
316s [01:13:51.081]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
316s [01:13:51.081]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
316s [01:13:51.081]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
316s [01:13:51.081]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
316s [01:13:51.081]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
316s [01:13:51.081]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
316s [01:13:51.081]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
316s [01:13:51.081]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
316s [01:13:51.081]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
316s [01:13:51.081]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
316s [01:13:51.081]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
316s [01:13:51.081]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
316s [01:13:51.081]  $ arguments       :List of 28
316s [01:13:51.081]   ..$ worker          : chr "localhost"
316s [01:13:51.081]   ..$ master          : NULL
316s [01:13:51.081]   ..$ port            : int 11225
316s [01:13:51.081]   ..$ connectTimeout  : num 120
316s [01:13:51.081]   ..$ timeout         : num 2592000
316s [01:13:51.081]   ..$ rscript         : NULL
316s [01:13:51.081]   ..$ homogeneous     : NULL
316s [01:13:51.081]   ..$ rscript_args    : NULL
316s [01:13:51.081]   ..$ rscript_envs    : NULL
316s [01:13:51.081]   ..$ rscript_libs    : NULL
316s [01:13:51.081]   ..$ rscript_startup : NULL
316s [01:13:51.081]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
316s [01:13:51.081]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.081]   ..$ methods         : logi TRUE
316s [01:13:51.081]   ..$ socketOptions   : chr "no-delay"
316s [01:13:51.081]   ..$ useXDR          : logi FALSE
316s [01:13:51.081]   ..$ outfile         : chr "/dev/null"
316s [01:13:51.081]   ..$ renice          : int NA
316s [01:13:51.081]   ..$ rshcmd          : NULL
316s [01:13:51.081]   ..$ user            : NULL
316s [01:13:51.081]   ..$ revtunnel       : logi NA
316s [01:13:51.081]   ..$ rshlogfile      : NULL
316s [01:13:51.081]   ..$ rshopts         : NULL
316s [01:13:51.081]   ..$ rank            : int 1
316s [01:13:51.081]   ..$ manual          : logi FALSE
316s [01:13:51.081]   ..$ dryrun          : logi FALSE
316s [01:13:51.081]   ..$ quiet           : logi FALSE
316s [01:13:51.081]   ..$ setup_strategy  : chr "parallel"
316s [01:13:51.081]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
316s [01:13:51.126] [local output] System call to launch all workers:
316s [01:13:51.126] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3579ed20a.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11225 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
316s [01:13:51.127] [local output] Starting PSOCK main server
316s [01:13:51.128] [local output] Workers launched
316s [01:13:51.128] [local output] Waiting for workers to connect back
316s [01:13:51.130]  - [local output] 0 workers out of 1 ready
316s [01:13:51.328]  - [local output] 0 workers out of 1 ready
316s [01:13:51.329]  - [local output] 1 workers out of 1 ready
316s [01:13:51.329] [local output] Launching of workers completed
316s [01:13:51.329] [local output] makeClusterPSOCK() ... done
316s > node <- cl[[1]]
316s > stopifnot(
316s +   is.list(node),
316s +   inherits(node, if (useXDR) "SOCKnode" else "SOCK0node"),
316s +   ! "session_info" %in% names(node)
316s + )
316s > parallel::stopCluster(cl)
316s > 
316s > 
316s > message("- makeClusterPSOCK() - w/out 'parallelly' on worker")
316s > 
316s > ovalue <- Sys.getenv("R_LIBS_USER")
316s > Sys.setenv(R_LIBS_USER = tempdir())
316s > cl <- makeClusterPSOCK(1L, outfile = "")
316s - makeClusterPSOCK() - w/out 'parallelly' on worker
316s [01:13:51.335] [local output] makeClusterPSOCK() ...
316s [01:13:51.339] [local output] Workers: [n = 1] ‘localhost’
316s [01:13:51.340] [local output] Base port: 11902
316s [01:13:51.340] [local output] Getting setup options for 1 cluster nodes ...
316s [01:13:51.340] [local output]  - Node 1 of 1 ...
316s [01:13:51.341] [local output] localMachine=TRUE => revtunnel=FALSE
316s 
316s [01:13:51.342] [local output] Rscript port: 11902
316s 
316s [01:13:51.342] [local output] Getting setup options for 1 cluster nodes ... done
316s [01:13:51.342] [local output]  - Parallel setup requested for some PSOCK nodes
316s [01:13:51.342] [local output] Setting up PSOCK nodes in parallel
316s [01:13:51.343] List of 36
316s [01:13:51.343]  $ worker          : chr "localhost"
316s [01:13:51.343]   ..- attr(*, "localhost")= logi TRUE
316s [01:13:51.343]  $ master          : chr "localhost"
316s [01:13:51.343]  $ port            : int 11902
316s [01:13:51.343]  $ connectTimeout  : num 120
316s [01:13:51.343]  $ timeout         : num 2592000
316s [01:13:51.343]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
316s [01:13:51.343]  $ homogeneous     : logi TRUE
316s [01:13:51.343]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
316s [01:13:51.343]  $ rscript_envs    : NULL
316s [01:13:51.343]  $ rscript_libs    : NULL
316s [01:13:51.343]  $ rscript_startup : NULL
316s [01:13:51.343]  $ rscript_sh      : chr "sh"
316s [01:13:51.343]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.343]  $ methods         : logi TRUE
316s [01:13:51.343]  $ socketOptions   : chr "no-delay"
316s [01:13:51.343]  $ useXDR          : logi FALSE
316s [01:13:51.343]  $ outfile         : chr ""
316s [01:13:51.343]  $ renice          : int NA
316s [01:13:51.343]  $ rshcmd          : NULL
316s [01:13:51.343]  $ user            : chr(0) 
316s [01:13:51.343]  $ revtunnel       : logi FALSE
316s [01:13:51.343]  $ rshlogfile      : NULL
316s [01:13:51.343]  $ rshopts         : chr(0) 
316s [01:13:51.343]  $ rank            : int 1
316s [01:13:51.343]  $ manual          : logi FALSE
316s [01:13:51.343]  $ dryrun          : logi FALSE
316s [01:13:51.343]  $ quiet           : logi FALSE
316s [01:13:51.343]  $ setup_strategy  : chr "parallel"
316s [01:13:51.343]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.343]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33d8e45e5.pid"
316s [01:13:51.343]  $ rshcmd_label    : NULL
316s [01:13:51.343]  $ rsh_call        : NULL
316s [01:13:51.343]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.343]  $ localMachine    : logi TRUE
316s [01:13:51.343]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
316s [01:13:51.343]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
316s [01:13:51.343]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
316s [01:13:51.343]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
316s [01:13:51.343]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
316s [01:13:51.343]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
316s [01:13:51.343]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
316s [01:13:51.343]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
316s [01:13:51.343]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
316s [01:13:51.343]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
316s [01:13:51.343]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
316s [01:13:51.343]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
316s [01:13:51.343]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
316s [01:13:51.343]  $ arguments       :List of 28
316s [01:13:51.343]   ..$ worker          : chr "localhost"
316s [01:13:51.343]   ..$ master          : NULL
316s [01:13:51.343]   ..$ port            : int 11902
316s [01:13:51.343]   ..$ connectTimeout  : num 120
316s [01:13:51.343]   ..$ timeout         : num 2592000
316s [01:13:51.343]   ..$ rscript         : NULL
316s [01:13:51.343]   ..$ homogeneous     : NULL
316s [01:13:51.343]   ..$ rscript_args    : NULL
316s [01:13:51.343]   ..$ rscript_envs    : NULL
316s [01:13:51.343]   ..$ rscript_libs    : NULL
316s [01:13:51.343]   ..$ rscript_startup : NULL
316s [01:13:51.343]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
316s [01:13:51.343]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.343]   ..$ methods         : logi TRUE
316s [01:13:51.343]   ..$ socketOptions   : chr "no-delay"
316s [01:13:51.343]   ..$ useXDR          : logi FALSE
316s [01:13:51.343]   ..$ outfile         : chr ""
316s [01:13:51.343]   ..$ renice          : int NA
316s [01:13:51.343]   ..$ rshcmd          : NULL
316s [01:13:51.343]   ..$ user            : NULL
316s [01:13:51.343]   ..$ revtunnel       : logi NA
316s [01:13:51.343]   ..$ rshlogfile      : NULL
316s [01:13:51.343]   ..$ rshopts         : NULL
316s [01:13:51.343]   ..$ rank            : int 1
316s [01:13:51.343]   ..$ manual          : logi FALSE
316s [01:13:51.343]   ..$ dryrun          : logi FALSE
316s [01:13:51.343]   ..$ quiet           : logi FALSE
316s [01:13:51.343]   ..$ setup_strategy  : chr "parallel"
316s [01:13:51.343]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
316s [01:13:51.385] [local output] System call to launch all workers:
316s [01:13:51.385] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33d8e45e5.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11902 OUT= TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
316s [01:13:51.385] [local output] Starting PSOCK main server
316s [01:13:51.386] [local output] Workers launched
316s [01:13:51.386] [local output] Waiting for workers to connect back
316s [01:13:51.388]  - [local output] 0 workers out of 1 ready
316s starting worker pid=2856 on localhost:11902 at 01:13:51.580
316s > print(cl)
316s Socket cluster with 1 nodes where 1 node is on host ‘localhost’ (R version 4.3.3 (2024-02-29), platform s390x-ibm-linux-gnu)
316s > parallel::stopCluster(cl)
316s > [01:13:51.586]  - [local output] 0 workers out of 1 ready
316s [01:13:51.587]  - [local output] 1 workers out of 1 ready
316s [01:13:51.587] [local output] Launching of workers completed
316s [01:13:51.587] [local output] Collecting session information from workers
316s [01:13:51.588] [local output]  - Worker #1 of 1
316s [01:13:51.588] [local output] makeClusterPSOCK() ... done
316s Sys.setenv(R_LIBS_USER = ovalue)
316s > 
316s > 
316s > message("- makeClusterPSOCK() - assert 'parallelly' is not loaded")
316s > - makeClusterPSOCK() - assert 'parallelly' is not loaded
316s 
316s > cl <- makeClusterPSOCK(1L)
316s [01:13:51.591] [local output] makeClusterPSOCK() ...
316s [01:13:51.599] [local output] Workers: [n = 1] ‘localhost’
316s [01:13:51.599] [local output] Base port: 11767
316s [01:13:51.599] [local output] Getting setup options for 1 cluster nodes ...
316s [01:13:51.599] [local output]  - Node 1 of 1 ...
316s [01:13:51.600] [local output] localMachine=TRUE => revtunnel=FALSE
316s 
316s [01:13:51.601] [local output] Rscript port: 11767
316s 
316s [01:13:51.601] [local output] Getting setup options for 1 cluster nodes ... done
316s [01:13:51.601] [local output]  - Parallel setup requested for some PSOCK nodes
316s [01:13:51.601] [local output] Setting up PSOCK nodes in parallel
316s [01:13:51.601] List of 36
316s [01:13:51.601]  $ worker          : chr "localhost"
316s [01:13:51.601]   ..- attr(*, "localhost")= logi TRUE
316s [01:13:51.601]  $ master          : chr "localhost"
316s [01:13:51.601]  $ port            : int 11767
316s [01:13:51.601]  $ connectTimeout  : num 120
316s [01:13:51.601]  $ timeout         : num 2592000
316s [01:13:51.601]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
316s [01:13:51.601]  $ homogeneous     : logi TRUE
316s [01:13:51.601]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
316s [01:13:51.601]  $ rscript_envs    : NULL
316s [01:13:51.601]  $ rscript_libs    : NULL
316s [01:13:51.601]  $ rscript_startup : NULL
316s [01:13:51.601]  $ rscript_sh      : chr "sh"
316s [01:13:51.601]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.601]  $ methods         : logi TRUE
316s [01:13:51.601]  $ socketOptions   : chr "no-delay"
316s [01:13:51.601]  $ useXDR          : logi FALSE
316s [01:13:51.601]  $ outfile         : chr "/dev/null"
316s [01:13:51.601]  $ renice          : int NA
316s [01:13:51.601]  $ rshcmd          : NULL
316s [01:13:51.601]  $ user            : chr(0) 
316s [01:13:51.601]  $ revtunnel       : logi FALSE
316s [01:13:51.601]  $ rshlogfile      : NULL
316s [01:13:51.601]  $ rshopts         : chr(0) 
316s [01:13:51.601]  $ rank            : int 1
316s [01:13:51.601]  $ manual          : logi FALSE
316s [01:13:51.601]  $ dryrun          : logi FALSE
316s [01:13:51.601]  $ quiet           : logi FALSE
316s [01:13:51.601]  $ setup_strategy  : chr "parallel"
316s [01:13:51.601]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.601]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f32b6deb4e.pid"
316s [01:13:51.601]  $ rshcmd_label    : NULL
316s [01:13:51.601]  $ rsh_call        : NULL
316s [01:13:51.601]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
316s [01:13:51.601]  $ localMachine    : logi TRUE
316s [01:13:51.601]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
316s [01:13:51.601]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
316s [01:13:51.601]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
316s [01:13:51.601]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
316s [01:13:51.601]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
316s [01:13:51.601]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
316s [01:13:51.601]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
316s [01:13:51.601]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
316s [01:13:51.601]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
316s [01:13:51.601]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
316s [01:13:51.601]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
316s [01:13:51.601]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
316s [01:13:51.601]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
316s [01:13:51.601]  $ arguments       :List of 28
316s [01:13:51.601]   ..$ worker          : chr "localhost"
316s [01:13:51.601]   ..$ master          : NULL
316s [01:13:51.601]   ..$ port            : int 11767
316s [01:13:51.601]   ..$ connectTimeout  : num 120
316s [01:13:51.601]   ..$ timeout         : num 2592000
316s [01:13:51.601]   ..$ rscript         : NULL
316s [01:13:51.601]   ..$ homogeneous     : NULL
316s [01:13:51.601]   ..$ rscript_args    : NULL
316s [01:13:51.601]   ..$ rscript_envs    : NULL
316s [01:13:51.601]   ..$ rscript_libs    : NULL
316s [01:13:51.601]   ..$ rscript_startup : NULL
316s [01:13:51.601]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
316s [01:13:51.601]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
316s [01:13:51.601]   ..$ methods         : logi TRUE
316s [01:13:51.601]   ..$ socketOptions   : chr "no-delay"
316s [01:13:51.601]   ..$ useXDR          : logi FALSE
316s [01:13:51.601]   ..$ outfile         : chr "/dev/null"
316s [01:13:51.601]   ..$ renice          : int NA
316s [01:13:51.601]   ..$ rshcmd          : NULL
316s [01:13:51.601]   ..$ user            : NULL
316s [01:13:51.601]   ..$ revtunnel       : logi NA
316s [01:13:51.601]   ..$ rshlogfile      : NULL
316s [01:13:51.601]   ..$ rshopts         : NULL
316s [01:13:51.601]   ..$ rank            : int 1
316s [01:13:51.601]   ..$ manual          : logi FALSE
316s [01:13:51.601]   ..$ dryrun          : logi FALSE
316s [01:13:51.601]   ..$ quiet           : logi FALSE
316s [01:13:51.601]   ..$ setup_strategy  : chr "parallel"
316s [01:13:51.601]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
316s [01:13:51.642] [local output] System call to launch all workers:
316s [01:13:51.642] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f32b6deb4e.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11767 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
316s [01:13:51.642] [local output] Starting PSOCK main server
316s [01:13:51.644] [local output] Workers launched
316s [01:13:51.644] [local output] Waiting for workers to connect back
316s [01:13:51.644]  - [local output] 0 workers out of 1 ready
316s [01:13:51.830]  - [local output] 0 workers out of 1 ready
316s [01:13:51.831]  - [local output] 1 workers out of 1 ready
316s [01:13:51.831] [local output] Launching of workers completed
316s [01:13:51.831] [local output] Collecting session information from workers
316s [01:13:51.832] [local output]  - Worker #1 of 1
316s [01:13:51.832] [local output] makeClusterPSOCK() ... done
316s > ns <- parallel::clusterCall(cl, function() { loadedNamespaces() })
316s > print(ns)
316s [[1]]
316s [1] "compiler"  "graphics"  "parallel"  "utils"     "grDevices" "stats"    
316s [7] "datasets"  "methods"   "base"     
316s 
316s > stopifnot(!is.element("parallelly", ns))
316s > parallel::stopCluster(cl)
316s - makeClusterPSOCK() - launch via the R executable
316s   Launcher: ‘/usr/lib/R/bin/R’
316s [01:13:51.841] [local output] makeClusterPSOCK() ...
316s > 
316s > 
316s > message("- makeClusterPSOCK() - launch via the R executable")
316s > 
316s > if (.Platform$OS.type == "windows") {
316s +   ## R and R.exe fails on MS Windows, cf. R-devel thread "MS Windows: R does
316s +   ## not escape quotes in CLI options the same way as Rterm and Rscript"
316s +   ## on 2021-12-15.
316s +   rscripts <- file.path(R.home("bin"), c("Rterm", "Rterm.exe"))
316s + } else {
316s +   rscripts <- file.path(R.home("bin"), "R")
316s + }
316s > 
316s > for (rscript in rscripts) {
316s +   message("  Launcher: ", sQuote(rscript))
316s +   rscript_args <- c("--no-echo", "--no-restore", "*", "--args")
316s +   cl <- tryCatch({
316s +     makeClusterPSOCK(1L, rscript = rscript, rscript_args = rscript_args)
316s +   }, warning = identity)
316s +   stopifnot(inherits(cl, "cluster"))
316s +   parallel::stopCluster(cl)
316s + }
316s [01:13:51.855] [local output] Workers: [n = 1] ‘localhost’
316s [01:13:51.856] [local output] Base port: 11281
316s [01:13:51.856] [local output] Getting setup options for 1 cluster nodes ...
316s [01:13:51.856] [local output]  - Node 1 of 1 ...
316s [01:13:51.856] [local output] localMachine=TRUE => revtunnel=FALSE
316s 
316s [01:13:51.859] Testing if worker's PID can be inferred: ‘'/usr/lib/R/bin/R' -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35b2a4e7d.pid")), silent = TRUE)' -e 'file.exists("/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35b2a4e7d.pid")'’
317s [01:13:52.045] - Possible to infer worker's PID: TRUE
317s [01:13:52.045] [local output] Rscript port: 11281
317s 
317s [01:13:52.046] [local output] Getting setup options for 1 cluster nodes ... done
317s [01:13:52.046] [local output]  - Parallel setup requested for some PSOCK nodes
317s [01:13:52.046] [local output] Setting up PSOCK nodes in parallel
317s [01:13:52.046] List of 36
317s [01:13:52.046]  $ worker          : chr "localhost"
317s [01:13:52.046]   ..- attr(*, "localhost")= logi TRUE
317s [01:13:52.046]  $ master          : chr "localhost"
317s [01:13:52.046]  $ port            : int 11281
317s [01:13:52.046]  $ connectTimeout  : num 120
317s [01:13:52.046]  $ timeout         : num 2592000
317s [01:13:52.046]  $ rscript         : chr "R_DEFAULT_PACKAGES=datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R'"
317s [01:13:52.046]  $ homogeneous     : logi TRUE
317s [01:13:52.046]  $ rscript_args    : chr "--no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/RtmpBpvt9F/worker.rank=1.parallell"| __truncated__
317s [01:13:52.046]  $ rscript_envs    : NULL
317s [01:13:52.046]  $ rscript_libs    : NULL
317s [01:13:52.046]  $ rscript_startup : NULL
317s [01:13:52.046]  $ rscript_sh      : chr "sh"
317s [01:13:52.046]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
317s [01:13:52.046]  $ methods         : logi TRUE
317s [01:13:52.046]  $ socketOptions   : chr "no-delay"
317s [01:13:52.046]  $ useXDR          : logi FALSE
317s [01:13:52.046]  $ outfile         : chr "/dev/null"
317s [01:13:52.046]  $ renice          : int NA
317s [01:13:52.046]  $ rshcmd          : NULL
317s [01:13:52.046]  $ user            : chr(0) 
317s [01:13:52.046]  $ revtunnel       : logi FALSE
317s [01:13:52.046]  $ rshlogfile      : NULL
317s [01:13:52.046]  $ rshopts         : chr(0) 
317s [01:13:52.046]  $ rank            : int 1
317s [01:13:52.046]  $ manual          : logi FALSE
317s [01:13:52.046]  $ dryrun          : logi FALSE
317s [01:13:52.046]  $ quiet           : logi FALSE
317s [01:13:52.046]  $ setup_strategy  : chr "parallel"
317s [01:13:52.046]  $ local_cmd       : chr "R_DEFAULT_PACKAGES=datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no-restore -e"| __truncated__
317s [01:13:52.046]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35b2a4e7d.pid"
317s [01:13:52.046]  $ rshcmd_label    : NULL
317s [01:13:52.046]  $ rsh_call        : NULL
317s [01:13:52.046]  $ cmd             : chr "R_DEFAULT_PACKAGES=datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no-restore -e"| __truncated__
317s [01:13:52.046]  $ localMachine    : logi TRUE
317s [01:13:52.046]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
317s [01:13:52.046]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
317s [01:13:52.046]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
317s [01:13:52.046]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
317s [01:13:52.046]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
317s [01:13:52.046]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
317s [01:13:52.046]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
317s [01:13:52.046]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
317s [01:13:52.046]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
317s [01:13:52.046]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
317s [01:13:52.046]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
317s [01:13:52.046]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
317s [01:13:52.046]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
317s [01:13:52.046]  $ arguments       :List of 28
317s [01:13:52.046]   ..$ worker          : chr "localhost"
317s [01:13:52.046]   ..$ master          : NULL
317s [01:13:52.046]   ..$ port            : int 11281
317s [01:13:52.046]   ..$ connectTimeout  : num 120
317s [01:13:52.046]   ..$ timeout         : num 2592000
317s [01:13:52.046]   ..$ rscript         : chr "/usr/lib/R/bin/R"
317s [01:13:52.046]   ..$ homogeneous     : NULL
317s [01:13:52.046]   ..$ rscript_args    : chr [1:4] "--no-echo" "--no-restore" "*" "--args"
317s [01:13:52.046]   ..$ rscript_envs    : NULL
317s [01:13:52.046]   ..$ rscript_libs    : NULL
317s [01:13:52.046]   ..$ rscript_startup : NULL
317s [01:13:52.046]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
317s [01:13:52.046]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
317s [01:13:52.046]   ..$ methods         : logi TRUE
317s [01:13:52.046]   ..$ socketOptions   : chr "no-delay"
317s [01:13:52.046]   ..$ useXDR          : logi FALSE
317s [01:13:52.046]   ..$ outfile         : chr "/dev/null"
317s [01:13:52.046]   ..$ renice          : int NA
317s [01:13:52.046]   ..$ rshcmd          : NULL
317s [01:13:52.046]   ..$ user            : NULL
317s [01:13:52.046]   ..$ revtunnel       : logi NA
317s [01:13:52.046]   ..$ rshlogfile      : NULL
317s [01:13:52.046]   ..$ rshopts         : NULL
317s [01:13:52.046]   ..$ rank            : int 1
317s [01:13:52.046]   ..$ manual          : logi FALSE
317s [01:13:52.046]   ..$ dryrun          : logi FALSE
317s [01:13:52.046]   ..$ quiet           : logi FALSE
317s [01:13:52.046]   ..$ setup_strategy  : chr "parallel"
317s [01:13:52.046]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
317s [01:13:52.070] [local output] System call to launch all workers:
317s [01:13:52.070] [local output] R_DEFAULT_PACKAGES=datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f35b2a4e7d.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' --args MASTER=localhost PORT=11281 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
317s [01:13:52.071] [local output] Starting PSOCK main server
317s [01:13:52.072] [local output] Workers launched
317s [01:13:52.072] [local output] Waiting for workers to connect back
317s [01:13:52.074]  - [local output] 0 workers out of 1 ready
317s > 
317s > 
317s > message("- makeClusterPSOCK() - default packages")
317s [01:13:52.273]  - [local output] 0 workers out of 1 ready
317s [01:13:52.274]  - [local output] 1 workers out of 1 ready
317s [01:13:52.274] [local output] Launching of workers completed
317s [01:13:52.274] [local output] Collecting session information from workers
317s [01:13:52.275] [local output]  - Worker #1 of 1
317s [01:13:52.275] [local output] makeClusterPSOCK() ... done
317s - makeClusterPSOCK() - default packages
317s > 
317s > if (.Platform$OS.type == "windows") {
317s +   ## R and R.exe fails on MS Windows, cf. R-devel thread "MS Windows: R does
317s +   ## not escape quotes in CLI options the same way as Rterm and Rscript"
317s +   ## on 2021-12-15.
317s +   rscripts <- file.path(R.home("bin"), c("Rscript", "Rterm", "Rterm.exe"))
317s + } else {
317s +   rscripts <- file.path(R.home("bin"), c("Rscript", "R"))
317s + }
317s > default_packages <- c("utils", "tools")
317s > for (rscript in rscripts) {
317s +   message("  Launcher: ", sQuote(rscript))
317s +   if (tools::file_path_sans_ext(basename(rscript)) %in% c("R", "Rterm")) {
317s +     rscript_args <- c("--no-echo", "--no-restore", "*", "--args")
317s +   } else {
317s +     rscript_args <- NULL
317s +   }
317s +   cl <- tryCatch({
317s +     makeClusterPSOCK(1L, rscript = rscript, rscript_args = rscript_args, default_packages = default_packages)
317s +   }, warning = identity)
317s +   stopifnot(inherits(cl, "cluster"))
317s +   pkgs <- parallel::clusterEvalQ(cl, { getOption("defaultPackages") })[[1]]
317s +   stopifnot(identical(pkgs, default_packages))
317s +   parallel::stopCluster(cl)
317s + }
317s   Launcher: ‘/usr/lib/R/bin/Rscript’
317s [01:13:52.299] [local output] makeClusterPSOCK() ...
317s [01:13:52.303] [local output] Workers: [n = 1] ‘localhost’
317s [01:13:52.306] [local output] Base port: 11541
317s [01:13:52.306] [local output] Getting setup options for 1 cluster nodes ...
317s [01:13:52.306] [local output]  - Node 1 of 1 ...
317s [01:13:52.306] [local output] localMachine=TRUE => revtunnel=FALSE
317s 
317s [01:13:52.313] [local output] Rscript port: 11541
317s 
317s [01:13:52.313] [local output] Getting setup options for 1 cluster nodes ... done
317s [01:13:52.313] [local output]  - Parallel setup requested for some PSOCK nodes
317s [01:13:52.313] [local output] Setting up PSOCK nodes in parallel
317s [01:13:52.314] List of 36
317s [01:13:52.314]  $ worker          : chr "localhost"
317s [01:13:52.314]   ..- attr(*, "localhost")= logi TRUE
317s [01:13:52.314]  $ master          : chr "localhost"
317s [01:13:52.314]  $ port            : int 11541
317s [01:13:52.314]  $ connectTimeout  : num 120
317s [01:13:52.314]  $ timeout         : num 2592000
317s [01:13:52.314]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
317s [01:13:52.314]  $ homogeneous     : logi TRUE
317s [01:13:52.314]  $ rscript_args    : chr "--default-packages=utils,tools -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/RtmpBpvt9F/worker.rank=1.p"| __truncated__
317s [01:13:52.314]  $ rscript_envs    : NULL
317s [01:13:52.314]  $ rscript_libs    : NULL
317s [01:13:52.314]  $ rscript_startup : NULL
317s [01:13:52.314]  $ rscript_sh      : chr "sh"
317s [01:13:52.314]  $ default_packages: chr [1:2] "utils" "tools"
317s [01:13:52.314]  $ methods         : logi TRUE
317s [01:13:52.314]  $ socketOptions   : chr "no-delay"
317s [01:13:52.314]  $ useXDR          : logi FALSE
317s [01:13:52.314]  $ outfile         : chr "/dev/null"
317s [01:13:52.314]  $ renice          : int NA
317s [01:13:52.314]  $ rshcmd          : NULL
317s [01:13:52.314]  $ user            : chr(0) 
317s [01:13:52.314]  $ revtunnel       : logi FALSE
317s [01:13:52.314]  $ rshlogfile      : NULL
317s [01:13:52.314]  $ rshopts         : chr(0) 
317s [01:13:52.314]  $ rank            : int 1
317s [01:13:52.314]  $ manual          : logi FALSE
317s [01:13:52.314]  $ dryrun          : logi FALSE
317s [01:13:52.314]  $ quiet           : logi FALSE
317s [01:13:52.314]  $ setup_strategy  : chr "parallel"
317s [01:13:52.314]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=utils,tools -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/R"| __truncated__
317s [01:13:52.314]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f31e9389de.pid"
317s [01:13:52.314]  $ rshcmd_label    : NULL
317s [01:13:52.314]  $ rsh_call        : NULL
317s [01:13:52.314]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=utils,tools -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/R"| __truncated__
317s [01:13:52.314]  $ localMachine    : logi TRUE
317s [01:13:52.314]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
317s [01:13:52.314]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
317s [01:13:52.314]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
317s [01:13:52.314]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
317s [01:13:52.314]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
317s [01:13:52.314]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
317s [01:13:52.314]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
317s [01:13:52.314]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
317s [01:13:52.314]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
317s [01:13:52.314]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
317s [01:13:52.314]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
317s [01:13:52.314]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
317s [01:13:52.314]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
317s [01:13:52.314]  $ arguments       :List of 28
317s [01:13:52.314]   ..$ worker          : chr "localhost"
317s [01:13:52.314]   ..$ master          : NULL
317s [01:13:52.314]   ..$ port            : int 11541
317s [01:13:52.314]   ..$ connectTimeout  : num 120
317s [01:13:52.314]   ..$ timeout         : num 2592000
317s [01:13:52.314]   ..$ rscript         : chr "/usr/lib/R/bin/Rscript"
317s [01:13:52.314]   ..$ homogeneous     : NULL
317s [01:13:52.314]   ..$ rscript_args    : NULL
317s [01:13:52.314]   ..$ rscript_envs    : NULL
317s [01:13:52.314]   ..$ rscript_libs    : NULL
317s [01:13:52.314]   ..$ rscript_startup : NULL
317s [01:13:52.314]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
317s [01:13:52.314]   ..$ default_packages: chr [1:2] "utils" "tools"
317s [01:13:52.314]   ..$ methods         : logi TRUE
317s [01:13:52.314]   ..$ socketOptions   : chr "no-delay"
317s [01:13:52.314]   ..$ useXDR          : logi FALSE
317s [01:13:52.314]   ..$ outfile         : chr "/dev/null"
317s [01:13:52.314]   ..$ renice          : int NA
317s [01:13:52.314]   ..$ rshcmd          : NULL
317s [01:13:52.314]   ..$ user            : NULL
317s [01:13:52.314]   ..$ revtunnel       : logi NA
317s [01:13:52.314]   ..$ rshlogfile      : NULL
317s [01:13:52.314]   ..$ rshopts         : NULL
317s [01:13:52.314]   ..$ rank            : int 1
317s [01:13:52.314]   ..$ manual          : logi FALSE
317s [01:13:52.314]   ..$ dryrun          : logi FALSE
317s [01:13:52.314]   ..$ quiet           : logi FALSE
317s [01:13:52.314]   ..$ setup_strategy  : chr "parallel"
317s [01:13:52.314]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
317s [01:13:52.339] [local output] System call to launch all workers:
317s [01:13:52.339] [local output] '/usr/lib/R/bin/Rscript' --default-packages=utils,tools -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f31e9389de.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11541 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
317s [01:13:52.340] [local output] Starting PSOCK main server
317s [01:13:52.341] [local output] Workers launched
317s [01:13:52.343] [local output] Waiting for workers to connect back
317s [01:13:52.343]  - [local output] 0 workers out of 1 ready
317s [01:13:52.427]  - [local output] 0 workers out of 1 ready
317s [01:13:52.428]  - [local output] 1 workers out of 1 ready
317s [01:13:52.428] [local output] Launching of workers completed
317s [01:13:52.428] [local output] Collecting session information from workers
317s [01:13:52.429] [local output]  - Worker #1 of 1
317s [01:13:52.429] [local output] makeClusterPSOCK() ... done
317s   Launcher: ‘/usr/lib/R/bin/R’
317s [01:13:52.430] [local output] makeClusterPSOCK() ...
317s [01:13:52.437] [local output] Workers: [n = 1] ‘localhost’
317s [01:13:52.438] [local output] Base port: 11977
317s [01:13:52.438] [local output] Getting setup options for 1 cluster nodes ...
317s [01:13:52.438] [local output]  - Node 1 of 1 ...
317s [01:13:52.439] [local output] localMachine=TRUE => revtunnel=FALSE
317s 
317s [01:13:52.440] [local output] Rscript port: 11977
317s 
317s [01:13:52.441] [local output] Getting setup options for 1 cluster nodes ... done
317s [01:13:52.441] [local output]  - Parallel setup requested for some PSOCK nodes
317s [01:13:52.441] [local output] Setting up PSOCK nodes in parallel
317s [01:13:52.441] List of 36
317s [01:13:52.441]  $ worker          : chr "localhost"
317s [01:13:52.441]   ..- attr(*, "localhost")= logi TRUE
317s [01:13:52.441]  $ master          : chr "localhost"
317s [01:13:52.441]  $ port            : int 11977
317s [01:13:52.441]  $ connectTimeout  : num 120
317s [01:13:52.441]  $ timeout         : num 2592000
317s [01:13:52.441]  $ rscript         : chr "R_DEFAULT_PACKAGES=utils,tools '/usr/lib/R/bin/R'"
317s [01:13:52.441]  $ homogeneous     : logi TRUE
317s [01:13:52.441]  $ rscript_args    : chr "--no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/RtmpBpvt9F/worker.rank=1.parallell"| __truncated__
317s [01:13:52.441]  $ rscript_envs    : NULL
317s [01:13:52.441]  $ rscript_libs    : NULL
317s [01:13:52.441]  $ rscript_startup : NULL
317s [01:13:52.441]  $ rscript_sh      : chr "sh"
317s [01:13:52.441]  $ default_packages: chr [1:2] "utils" "tools"
317s [01:13:52.441]  $ methods         : logi TRUE
317s [01:13:52.441]  $ socketOptions   : chr "no-delay"
317s [01:13:52.441]  $ useXDR          : logi FALSE
317s [01:13:52.441]  $ outfile         : chr "/dev/null"
317s [01:13:52.441]  $ renice          : int NA
317s [01:13:52.441]  $ rshcmd          : NULL
317s [01:13:52.441]  $ user            : chr(0) 
317s [01:13:52.441]  $ revtunnel       : logi FALSE
317s [01:13:52.441]  $ rshlogfile      : NULL
317s [01:13:52.441]  $ rshopts         : chr(0) 
317s [01:13:52.441]  $ rank            : int 1
317s [01:13:52.441]  $ manual          : logi FALSE
317s [01:13:52.441]  $ dryrun          : logi FALSE
317s [01:13:52.441]  $ quiet           : logi FALSE
317s [01:13:52.441]  $ setup_strategy  : chr "parallel"
317s [01:13:52.441]  $ local_cmd       : chr "R_DEFAULT_PACKAGES=utils,tools '/usr/lib/R/bin/R' --no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpi"| __truncated__
317s [01:13:52.441]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33470940d.pid"
317s [01:13:52.441]  $ rshcmd_label    : NULL
317s [01:13:52.441]  $ rsh_call        : NULL
317s [01:13:52.441]  $ cmd             : chr "R_DEFAULT_PACKAGES=utils,tools '/usr/lib/R/bin/R' --no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpi"| __truncated__
317s [01:13:52.441]  $ localMachine    : logi TRUE
317s [01:13:52.441]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
317s [01:13:52.441]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
317s [01:13:52.441]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
317s [01:13:52.441]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
317s [01:13:52.441]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
317s [01:13:52.441]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
317s [01:13:52.441]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
317s [01:13:52.441]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
317s [01:13:52.441]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
317s [01:13:52.441]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
317s [01:13:52.441]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
317s [01:13:52.441]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
317s [01:13:52.441]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
317s [01:13:52.441]  $ arguments       :List of 28
317s [01:13:52.441]   ..$ worker          : chr "localhost"
317s [01:13:52.441]   ..$ master          : NULL
317s [01:13:52.441]   ..$ port            : int 11977
317s [01:13:52.441]   ..$ connectTimeout  : num 120
317s [01:13:52.441]   ..$ timeout         : num 2592000
317s [01:13:52.441]   ..$ rscript         : chr "/usr/lib/R/bin/R"
317s [01:13:52.441]   ..$ homogeneous     : NULL
317s [01:13:52.441]   ..$ rscript_args    : chr [1:4] "--no-echo" "--no-restore" "*" "--args"
317s [01:13:52.441]   ..$ rscript_envs    : NULL
317s [01:13:52.441]   ..$ rscript_libs    : NULL
317s [01:13:52.441]   ..$ rscript_startup : NULL
317s [01:13:52.441]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
317s [01:13:52.441]   ..$ default_packages: chr [1:2] "utils" "tools"
317s [01:13:52.441]   ..$ methods         : logi TRUE
317s [01:13:52.441]   ..$ socketOptions   : chr "no-delay"
317s [01:13:52.441]   ..$ useXDR          : logi FALSE
317s [01:13:52.441]   ..$ outfile         : chr "/dev/null"
317s [01:13:52.441]   ..$ renice          : int NA
317s [01:13:52.441]   ..$ rshcmd          : NULL
317s [01:13:52.441]   ..$ user            : NULL
317s [01:13:52.441]   ..$ revtunnel       : logi NA
317s [01:13:52.441]   ..$ rshlogfile      : NULL
317s [01:13:52.441]   ..$ rshopts         : NULL
317s [01:13:52.441]   ..$ rank            : int 1
317s [01:13:52.441]   ..$ manual          : logi FALSE
317s [01:13:52.441]   ..$ dryrun          : logi FALSE
317s [01:13:52.441]   ..$ quiet           : logi FALSE
317s [01:13:52.441]   ..$ setup_strategy  : chr "parallel"
317s [01:13:52.441]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
317s [01:13:52.463] [local output] System call to launch all workers:
317s [01:13:52.463] [local output] R_DEFAULT_PACKAGES=utils,tools '/usr/lib/R/bin/R' --no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f33470940d.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' --args MASTER=localhost PORT=11977 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
317s [01:13:52.463] [local output] Starting PSOCK main server
317s [01:13:52.464] [local output] Workers launched
317s [01:13:52.464] [local output] Waiting for workers to connect back
317s [01:13:52.465]  - [local output] 0 workers out of 1 ready
317s [01:13:52.553]  - [local output] 0 workers out of 1 ready
317s [01:13:52.553]  - [local output] 1 workers out of 1 ready
317s [01:13:52.554] [local output] Launching of workers completed
317s [01:13:52.554] [local output] Collecting session information from workers
317s [01:13:52.554] [local output]  - Worker #1 of 1
317s [01:13:52.554] [local output] makeClusterPSOCK() ... done
317s > 
317s > if (.Platform$OS.type == "windows") {
317s +   ## R and R.exe fails on MS Windows, cf. R-devel thread "MS Windows: R does
317s +   ## not escape quotes in CLI options the same way as Rterm and Rscript"
317s +   ## on 2021-12-15.
317s +   rscripts <- file.path(R.home("bin"), c("Rscript", "Rterm", "Rterm.exe"))
317s + } else {
317s +   rscripts <- file.path(R.home("bin"), c("Rscript", "R"))
317s + }
317s > default_packages <- c("parallelly", "*")
317s > truth <- unique(c("parallelly", getOption("defaultPackages")))
317s > for (rscript in rscripts) {
317s +   message("  Launcher: ", sQuote(rscript))
317s +   if (tools::file_path_sans_ext(basename(rscript)) %in% c("R", "Rterm")) {
317s +     rscript_args <- c("--no-echo", "--no-restore", "*", "--args")
317s +   } else {
317s +     rscript_args <- NULL
317s +   }
317s +   cl <- tryCatch({
317s +     makeClusterPSOCK(1L, rscript = rscript, rscript_args = rscript_args, default_packages = default_packages)
317s +   }, warning = identity)
317s +   stopifnot(inherits(cl, "cluster"))
317s +   pkgs <- parallel::clusterEvalQ(cl, { getOption("defaultPackages") })[[1]]
317s +   stopifnot(identical(pkgs, truth))
317s +   parallel::stopCluster(cl)
317s + }
317s   Launcher: ‘/usr/lib/R/bin/Rscript’
317s [01:13:52.571] [local output] makeClusterPSOCK() ...
317s [01:13:52.574] [local output] Workers: [n = 1] ‘localhost’
317s [01:13:52.575] [local output] Base port: 11220
317s [01:13:52.575] [local output] Getting setup options for 1 cluster nodes ...
317s [01:13:52.575] [local output]  - Node 1 of 1 ...
317s [01:13:52.575] [local output] localMachine=TRUE => revtunnel=FALSE
317s 
317s [01:13:52.577] [local output] Rscript port: 11220
317s 
317s [01:13:52.577] [local output] Getting setup options for 1 cluster nodes ... done
317s [01:13:52.577] [local output]  - Parallel setup requested for some PSOCK nodes
317s [01:13:52.578] [local output] Setting up PSOCK nodes in parallel
317s [01:13:52.578] List of 36
317s [01:13:52.578]  $ worker          : chr "localhost"
317s [01:13:52.578]   ..- attr(*, "localhost")= logi TRUE
317s [01:13:52.578]  $ master          : chr "localhost"
317s [01:13:52.578]  $ port            : int 11220
317s [01:13:52.578]  $ connectTimeout  : num 120
317s [01:13:52.578]  $ timeout         : num 2592000
317s [01:13:52.578]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
317s [01:13:52.578]  $ homogeneous     : logi TRUE
317s [01:13:52.578]  $ rscript_args    : chr "--default-packages=parallelly,datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys."| __truncated__
317s [01:13:52.578]  $ rscript_envs    : NULL
317s [01:13:52.578]  $ rscript_libs    : NULL
317s [01:13:52.578]  $ rscript_startup : NULL
317s [01:13:52.578]  $ rscript_sh      : chr "sh"
317s [01:13:52.578]  $ default_packages: chr [1:7] "parallelly" "datasets" "utils" "grDevices" ...
317s [01:13:52.578]  $ methods         : logi TRUE
317s [01:13:52.578]  $ socketOptions   : chr "no-delay"
317s [01:13:52.578]  $ useXDR          : logi FALSE
317s [01:13:52.578]  $ outfile         : chr "/dev/null"
317s [01:13:52.578]  $ renice          : int NA
317s [01:13:52.578]  $ rshcmd          : NULL
317s [01:13:52.578]  $ user            : chr(0) 
317s [01:13:52.578]  $ revtunnel       : logi FALSE
317s [01:13:52.578]  $ rshlogfile      : NULL
317s [01:13:52.578]  $ rshopts         : chr(0) 
317s [01:13:52.578]  $ rank            : int 1
317s [01:13:52.578]  $ manual          : logi FALSE
317s [01:13:52.578]  $ dryrun          : logi FALSE
317s [01:13:52.578]  $ quiet           : logi FALSE
317s [01:13:52.578]  $ setup_strategy  : chr "parallel"
317s [01:13:52.578]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=parallelly,datasets,utils,grDevices,graphics,stats,methods -e 'try("| __truncated__
317s [01:13:52.578]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3765ffa4.pid"
317s [01:13:52.578]  $ rshcmd_label    : NULL
317s [01:13:52.578]  $ rsh_call        : NULL
317s [01:13:52.578]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=parallelly,datasets,utils,grDevices,graphics,stats,methods -e 'try("| __truncated__
317s [01:13:52.578]  $ localMachine    : logi TRUE
317s [01:13:52.578]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
317s [01:13:52.578]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
317s [01:13:52.578]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
317s [01:13:52.578]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
317s [01:13:52.578]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
317s [01:13:52.578]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
317s [01:13:52.578]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
317s [01:13:52.578]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
317s [01:13:52.578]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
317s [01:13:52.578]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
317s [01:13:52.578]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
317s [01:13:52.578]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
317s [01:13:52.578]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
317s [01:13:52.578]  $ arguments       :List of 28
317s [01:13:52.578]   ..$ worker          : chr "localhost"
317s [01:13:52.578]   ..$ master          : NULL
317s [01:13:52.578]   ..$ port            : int 11220
317s [01:13:52.578]   ..$ connectTimeout  : num 120
317s [01:13:52.578]   ..$ timeout         : num 2592000
317s [01:13:52.578]   ..$ rscript         : chr "/usr/lib/R/bin/Rscript"
317s [01:13:52.578]   ..$ homogeneous     : NULL
317s [01:13:52.578]   ..$ rscript_args    : NULL
317s [01:13:52.578]   ..$ rscript_envs    : NULL
317s [01:13:52.578]   ..$ rscript_libs    : NULL
317s [01:13:52.578]   ..$ rscript_startup : NULL
317s [01:13:52.578]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
317s [01:13:52.578]   ..$ default_packages: chr [1:2] "parallelly" "*"
317s [01:13:52.578]   ..$ methods         : logi TRUE
317s [01:13:52.578]   ..$ socketOptions   : chr "no-delay"
317s [01:13:52.578]   ..$ useXDR          : logi FALSE
317s [01:13:52.578]   ..$ outfile         : chr "/dev/null"
317s [01:13:52.578]   ..$ renice          : int NA
317s [01:13:52.578]   ..$ rshcmd          : NULL
317s [01:13:52.578]   ..$ user            : NULL
317s [01:13:52.578]   ..$ revtunnel       : logi NA
317s [01:13:52.578]   ..$ rshlogfile      : NULL
317s [01:13:52.578]   ..$ rshopts         : NULL
317s [01:13:52.578]   ..$ rank            : int 1
317s [01:13:52.578]   ..$ manual          : logi FALSE
317s [01:13:52.578]   ..$ dryrun          : logi FALSE
317s [01:13:52.578]   ..$ quiet           : logi FALSE
317s [01:13:52.578]   ..$ setup_strategy  : chr "parallel"
317s [01:13:52.578]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
317s [01:13:52.599] [local output] System call to launch all workers:
317s [01:13:52.600] [local output] '/usr/lib/R/bin/Rscript' --default-packages=parallelly,datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3765ffa4.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11220 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
317s [01:13:52.600] [local output] Starting PSOCK main server
317s [01:13:52.600] [local output] Workers launched
317s [01:13:52.601] [local output] Waiting for workers to connect back
317s [01:13:52.601]  - [local output] 0 workers out of 1 ready
317s [01:13:52.835]  - [local output] 0 workers out of 1 ready
317s [01:13:52.835]  - [local output] 1 workers out of 1 ready
317s [01:13:52.835] [local output] Launching of workers completed
317s [01:13:52.835] [local output] Collecting session information from workers
317s [01:13:52.836] [local output]  - Worker #1 of 1
317s [01:13:52.836] [local output] makeClusterPSOCK() ... done
317s   Launcher: ‘/usr/lib/R/bin/R’
317s [01:13:52.837] [local output] makeClusterPSOCK() ...
317s [01:13:52.847] [local output] Workers: [n = 1] ‘localhost’
317s [01:13:52.848] [local output] Base port: 11972
317s [01:13:52.848] [local output] Getting setup options for 1 cluster nodes ...
317s [01:13:52.848] [local output]  - Node 1 of 1 ...
317s [01:13:52.848] [local output] localMachine=TRUE => revtunnel=FALSE
317s 
317s [01:13:52.850] [local output] Rscript port: 11972
317s 
317s [01:13:52.850] [local output] Getting setup options for 1 cluster nodes ... done
317s [01:13:52.850] [local output]  - Parallel setup requested for some PSOCK nodes
317s [01:13:52.851] [local output] Setting up PSOCK nodes in parallel
317s [01:13:52.851] List of 36
317s [01:13:52.851]  $ worker          : chr "localhost"
317s [01:13:52.851]   ..- attr(*, "localhost")= logi TRUE
317s [01:13:52.851]  $ master          : chr "localhost"
317s [01:13:52.851]  $ port            : int 11972
317s [01:13:52.851]  $ connectTimeout  : num 120
317s [01:13:52.851]  $ timeout         : num 2592000
317s [01:13:52.851]  $ rscript         : chr "R_DEFAULT_PACKAGES=parallelly,datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R'"
317s [01:13:52.851]  $ homogeneous     : logi TRUE
317s [01:13:52.851]  $ rscript_args    : chr "--no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file=\"/tmp/RtmpBpvt9F/worker.rank=1.parallell"| __truncated__
317s [01:13:52.851]  $ rscript_envs    : NULL
317s [01:13:52.851]  $ rscript_libs    : NULL
317s [01:13:52.851]  $ rscript_startup : NULL
317s [01:13:52.851]  $ rscript_sh      : chr "sh"
317s [01:13:52.851]  $ default_packages: chr [1:7] "parallelly" "datasets" "utils" "grDevices" ...
317s [01:13:52.851]  $ methods         : logi TRUE
317s [01:13:52.851]  $ socketOptions   : chr "no-delay"
317s [01:13:52.851]  $ useXDR          : logi FALSE
317s [01:13:52.851]  $ outfile         : chr "/dev/null"
317s [01:13:52.851]  $ renice          : int NA
317s [01:13:52.851]  $ rshcmd          : NULL
317s [01:13:52.851]  $ user            : chr(0) 
317s [01:13:52.851]  $ revtunnel       : logi FALSE
317s [01:13:52.851]  $ rshlogfile      : NULL
317s [01:13:52.851]  $ rshopts         : chr(0) 
317s [01:13:52.851]  $ rank            : int 1
317s [01:13:52.851]  $ manual          : logi FALSE
317s [01:13:52.851]  $ dryrun          : logi FALSE
317s [01:13:52.851]  $ quiet           : logi FALSE
317s [01:13:52.851]  $ setup_strategy  : chr "parallel"
317s [01:13:52.851]  $ local_cmd       : chr "R_DEFAULT_PACKAGES=parallelly,datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no"| __truncated__
317s [01:13:52.851]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3753a9076.pid"
317s [01:13:52.851]  $ rshcmd_label    : NULL
317s [01:13:52.851]  $ rsh_call        : NULL
317s [01:13:52.851]  $ cmd             : chr "R_DEFAULT_PACKAGES=parallelly,datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no"| __truncated__
317s [01:13:52.851]  $ localMachine    : logi TRUE
317s [01:13:52.851]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
317s [01:13:52.851]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
317s [01:13:52.851]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
317s [01:13:52.851]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
317s [01:13:52.851]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
317s [01:13:52.851]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
317s [01:13:52.851]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
317s [01:13:52.851]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
317s [01:13:52.851]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
317s [01:13:52.851]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
317s [01:13:52.851]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
317s [01:13:52.851]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
317s [01:13:52.851]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
317s [01:13:52.851]  $ arguments       :List of 28
317s [01:13:52.851]   ..$ worker          : chr "localhost"
317s [01:13:52.851]   ..$ master          : NULL
317s [01:13:52.851]   ..$ port            : int 11972
317s [01:13:52.851]   ..$ connectTimeout  : num 120
317s [01:13:52.851]   ..$ timeout         : num 2592000
317s [01:13:52.851]   ..$ rscript         : chr "/usr/lib/R/bin/R"
317s [01:13:52.851]   ..$ homogeneous     : NULL
317s [01:13:52.851]   ..$ rscript_args    : chr [1:4] "--no-echo" "--no-restore" "*" "--args"
317s [01:13:52.851]   ..$ rscript_envs    : NULL
317s [01:13:52.851]   ..$ rscript_libs    : NULL
317s [01:13:52.851]   ..$ rscript_startup : NULL
317s [01:13:52.851]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
317s [01:13:52.851]   ..$ default_packages: chr [1:2] "parallelly" "*"
317s [01:13:52.851]   ..$ methods         : logi TRUE
317s [01:13:52.851]   ..$ socketOptions   : chr "no-delay"
317s [01:13:52.851]   ..$ useXDR          : logi FALSE
317s [01:13:52.851]   ..$ outfile         : chr "/dev/null"
317s [01:13:52.851]   ..$ renice          : int NA
317s [01:13:52.851]   ..$ rshcmd          : NULL
317s [01:13:52.851]   ..$ user            : NULL
317s [01:13:52.851]   ..$ revtunnel       : logi NA
317s [01:13:52.851]   ..$ rshlogfile      : NULL
317s [01:13:52.851]   ..$ rshopts         : NULL
317s [01:13:52.851]   ..$ rank            : int 1
317s [01:13:52.851]   ..$ manual          : logi FALSE
317s [01:13:52.851]   ..$ dryrun          : logi FALSE
317s [01:13:52.851]   ..$ quiet           : logi FALSE
317s [01:13:52.851]   ..$ setup_strategy  : chr "parallel"
317s [01:13:52.851]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
317s [01:13:52.873] [local output] System call to launch all workers:
317s [01:13:52.874] [local output] R_DEFAULT_PACKAGES=parallelly,datasets,utils,grDevices,graphics,stats,methods '/usr/lib/R/bin/R' --no-echo --no-restore -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f3753a9076.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' --args MASTER=localhost PORT=11972 OUT=/dev/null TIMEOUT=2592000 XDR=FALSE SETUPTIMEOUT=120 SETUPSTRATEGY=parallel
317s [01:13:52.874] [local output] Starting PSOCK main server
317s [01:13:52.875] [local output] Workers launched
317s [01:13:52.875] [local output] Waiting for workers to connect back
317s [01:13:52.875]  - [local output] 0 workers out of 1 ready
318s [01:13:53.084]  - [local output] 0 workers out of 1 ready
318s [01:13:53.085]  - [local output] 1 workers out of 1 ready
318s [01:13:53.086] [local output] Launching of workers completed
318s [01:13:53.086] [local output] Collecting session information from workers
318s [01:13:53.086] [local output]  - Worker #1 of 1
318s [01:13:53.087] [local output] makeClusterPSOCK() ... done
318s - makeClusterPSOCK() - exceptions
318s [01:13:53.088] [local output] makeClusterPSOCK() ...
318s > 
318s > 
318s > message("- makeClusterPSOCK() - exceptions")
318s > 
318s > res <- tryCatch({
318s +   cl <- makeClusterPSOCK(1:2)
318s + }, error = identity)
318s > print(res)
318s <simpleError: When numeric, argument 'workers' must be a single value: 2>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > res <- tryCatch({
318s + [01:13:53.095] [local output] makeClusterPSOCK() ...
318s [01:13:53.096] [local output] makeClusterPSOCK() ...
318s   cl <- makeClusterPSOCK(0L)
318s + }, error = identity)
318s > print(res)
318s <simpleError: Number of 'workers' must be one or greater: 0>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > res <- tryCatch({
318s +   cl <- makeClusterPSOCK(1L, rshcmd = character(0L))
318s + }, error = identity)
318s [01:13:53.099] [local output] Workers: [n = 1] ‘localhost’
318s [01:13:53.099] [local output] Base port: 11527
318s [01:13:53.099] [local output] Getting setup options for 1 cluster nodes ...
318s [01:13:53.099] [local output]  - Node 1 of 1 ...
318s > print(res)
318s <simpleError: ‘length(rshcmd) >= 1L’ is not TRUE>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > res <- tryCatch({
318s +   cl <- makeClusterPSOCK(1L, port = integer(0L))
318s + }, error = identity)
318s > print(res)
318s <simpleError in makeClusterPSOCK(1L, port = integer(0L)): Argument 'port' must be of length one or more: 0>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > res <- tryCatch({
318s +   cl <- makeClusterPSOCK(1L, port = NA_integer_)
318s + }, error = identity)
318s > print(res)
318s <simpleError in isTcpPortAvailable(port): !is.na(port) is not TRUE>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > 
318s > message("- makeClusterPSOCK() - exceptions")
318s > 
318s > ## Non-existing hostname
318s > [01:13:53.101] [local output] makeClusterPSOCK() ...
318s [01:13:53.105] [local output] Workers: [n = 1] ‘localhost’
318s [01:13:53.106] [local output] makeClusterPSOCK() ...
318s [01:13:53.109] [local output] Workers: [n = 1] ‘localhost’
318s - makeClusterPSOCK() - exceptions
318s res <- tryCatch({
318s +   cl <- makeNodePSOCK("not.a.localhost.hostname", revtunnel = TRUE)
318s + }, error = identity)
318s > print(res)
318s <simpleError in makeNodePSOCK("not.a.localhost.hostname", revtunnel = TRUE): argument "port" is missing, with no default>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > ## Invalid port
318s > res <- tryCatch({
318s +   cl <- makeNodePSOCK("localhost", port = NA_integer_)
318s + }, error = identity)
318s > print(res)
318s <simpleError: Invalid port: NA>
318s > stopifnot(inherits(res, "error"))
318s > 
318s > ## Don't test on CRAN
318s > if (fullTest || covr_testing) {
318s +   ## Occupied/blocked port
318s +   res <- tryCatch(
318s +     cl <- parallelly::makeClusterPSOCK("localhost", port = 80L, tries = 1L),
318s +   error = identity)
318s +   print(res)
318s +   ## Skip error assertion in case this actually works on some machine.
318s +   ## But where it fails, we are testing the port-failure exception code.
318s + }
318s > 
318s > 
318s > ## https://github.com/HenrikBengtsson/parallelly/issues/95
318s > if (getRversion() >= "4.0.0") {
318s +   res <- tryCatch({
318s +     parallelly::makeClusterPSOCK(1L, rscript_startup = quote(Sys.sleep(6.0)),
318s +                                  connectTimeout = 0.1, timeout = 7.0)
318s +   }, error = identity)
318s +   print(res)
318s +   stopifnot(
318s +     inherits(res, "error"),
318s +     grepl("^Cluster setup failed", conditionMessage(res))
318s +   )
318s + 
318s +   ## Make sure to wait for background process to timeout before continuing,
318s +   ## when on MS Windows
318s +   if (.Platform$OS.type == "windows") Sys.sleep(5.0)
318s + }
318s [01:13:53.113] [local output] makeClusterPSOCK() ...
318s [01:13:53.116] [local output] Workers: [n = 1] ‘localhost’
318s [01:13:53.117] [local output] Base port: 11570
318s [01:13:53.117] [local output] Getting setup options for 1 cluster nodes ...
318s [01:13:53.117] [local output]  - Node 1 of 1 ...
318s [01:13:53.118] [local output] localMachine=TRUE => revtunnel=FALSE
318s 
318s [01:13:53.118] [local output] Rscript port: 11570
318s 
318s [01:13:53.119] [local output] Getting setup options for 1 cluster nodes ... done
318s [01:13:53.119] [local output]  - Parallel setup requested for some PSOCK nodes
318s [01:13:53.119] [local output] Setting up PSOCK nodes in parallel
318s [01:13:53.119] List of 36
318s [01:13:53.119]  $ worker          : chr "localhost"
318s [01:13:53.119]   ..- attr(*, "localhost")= logi TRUE
318s [01:13:53.119]  $ master          : chr "localhost"
318s [01:13:53.119]  $ port            : int 11570
318s [01:13:53.119]  $ connectTimeout  : num 0.1
318s [01:13:53.119]  $ timeout         : num 7
318s [01:13:53.119]  $ rscript         : chr "'/usr/lib/R/bin/Rscript'"
318s [01:13:53.119]  $ homogeneous     : logi TRUE
318s [01:13:53.119]  $ rscript_args    : chr "--default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),fi"| __truncated__
318s [01:13:53.119]  $ rscript_envs    : NULL
318s [01:13:53.119]  $ rscript_libs    : NULL
318s [01:13:53.119]  $ rscript_startup : chr [1:2] "-e" "'invisible({Sys.sleep(6)})'"
318s [01:13:53.119]  $ rscript_sh      : chr "sh"
318s [01:13:53.119]  $ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
318s [01:13:53.119]  $ methods         : logi TRUE
318s [01:13:53.119]  $ socketOptions   : chr "no-delay"
318s [01:13:53.119]  $ useXDR          : logi FALSE
318s [01:13:53.119]  $ outfile         : chr "/dev/null"
318s [01:13:53.119]  $ renice          : int NA
318s [01:13:53.119]  $ rshcmd          : NULL
318s [01:13:53.119]  $ user            : chr(0) 
318s [01:13:53.119]  $ revtunnel       : logi FALSE
318s [01:13:53.119]  $ rshlogfile      : NULL
318s [01:13:53.119]  $ rshopts         : chr(0) 
318s [01:13:53.119]  $ rank            : int 1
318s [01:13:53.119]  $ manual          : logi FALSE
318s [01:13:53.119]  $ dryrun          : logi FALSE
318s [01:13:53.119]  $ quiet           : logi FALSE
318s [01:13:53.119]  $ setup_strategy  : chr "parallel"
318s [01:13:53.119]  $ local_cmd       : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
318s [01:13:53.119]  $ pidfile         : chr "/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f31104d3a7.pid"
318s [01:13:53.119]  $ rshcmd_label    : NULL
318s [01:13:53.119]  $ rsh_call        : NULL
318s [01:13:53.119]  $ cmd             : chr "'/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWar"| __truncated__
318s [01:13:53.119]  $ localMachine    : logi TRUE
318s [01:13:53.119]  $ make_fcn        :function (worker = getOption2("parallelly.localhost.hostname", "localhost"), 
318s [01:13:53.119]     master = NULL, port, connectTimeout = getOption2("parallelly.makeNodePSOCK.connectTimeout", 
318s [01:13:53.119]         2 * 60), timeout = getOption2("parallelly.makeNodePSOCK.timeout", 
318s [01:13:53.119]         30 * 24 * 60 * 60), rscript = NULL, homogeneous = NULL, rscript_args = NULL, 
318s [01:13:53.119]     rscript_envs = NULL, rscript_libs = NULL, rscript_startup = NULL, rscript_sh = c("auto", 
318s [01:13:53.119]         "cmd", "sh"), default_packages = c("datasets", "utils", "grDevices", 
318s [01:13:53.119]         "graphics", "stats", if (methods) "methods"), methods = TRUE, socketOptions = getOption2("parallelly.makeNodePSOCK.socketOptions", 
318s [01:13:53.119]         "no-delay"), useXDR = getOption2("parallelly.makeNodePSOCK.useXDR", 
318s [01:13:53.119]         FALSE), outfile = "/dev/null", renice = NA_integer_, rshcmd = getOption2("parallelly.makeNodePSOCK.rshcmd", 
318s [01:13:53.119]         NULL), user = NULL, revtunnel = NA, rshlogfile = NULL, rshopts = getOption2("parallelly.makeNodePSOCK.rshopts", 
318s [01:13:53.119]         NULL), rank = 1L, manual = FALSE, dryrun = FALSE, quiet = FALSE, 
318s [01:13:53.119]     setup_strategy = getOption2("parallelly.makeNodePSOCK.setup_strategy", 
318s [01:13:53.119]         "parallel"), action = c("launch", "options"), verbose = FALSE)  
318s [01:13:53.119]  $ arguments       :List of 28
318s [01:13:53.119]   ..$ worker          : chr "localhost"
318s [01:13:53.119]   ..$ master          : NULL
318s [01:13:53.119]   ..$ port            : int 11570
318s [01:13:53.119]   ..$ connectTimeout  : num 0.1
318s [01:13:53.119]   ..$ timeout         : num 7
318s [01:13:53.119]   ..$ rscript         : NULL
318s [01:13:53.119]   ..$ homogeneous     : NULL
318s [01:13:53.119]   ..$ rscript_args    : NULL
318s [01:13:53.119]   ..$ rscript_envs    : NULL
318s [01:13:53.119]   ..$ rscript_libs    : NULL
318s [01:13:53.119]   ..$ rscript_startup : language Sys.sleep(6)
318s [01:13:53.119]   ..$ rscript_sh      : chr [1:3] "auto" "cmd" "sh"
318s [01:13:53.119]   ..$ default_packages: chr [1:6] "datasets" "utils" "grDevices" "graphics" ...
318s [01:13:53.119]   ..$ methods         : logi TRUE
318s [01:13:53.119]   ..$ socketOptions   : chr "no-delay"
318s [01:13:53.119]   ..$ useXDR          : logi FALSE
318s [01:13:53.119]   ..$ outfile         : chr "/dev/null"
318s [01:13:53.119]   ..$ renice          : int NA
318s [01:13:53.119]   ..$ rshcmd          : NULL
318s [01:13:53.119]   ..$ user            : NULL
318s [01:13:53.119]   ..$ revtunnel       : logi NA
318s [01:13:53.119]   ..$ rshlogfile      : NULL
318s [01:13:53.119]   ..$ rshopts         : NULL
318s [01:13:53.119]   ..$ rank            : int 1
318s [01:13:53.119]   ..$ manual          : logi FALSE
318s [01:13:53.119]   ..$ dryrun          : logi FALSE
318s [01:13:53.119]   ..$ quiet           : logi FALSE
318s [01:13:53.119]   ..$ setup_strategy  : chr "parallel"
318s [01:13:53.119]  - attr(*, "class")= chr [1:2] "makeNodePSOCKOptions" "makeNodeOptions"
318s [01:13:53.143] [local output] System call to launch all workers:
318s [01:13:53.143] [local output] '/usr/lib/R/bin/Rscript' --default-packages=datasets,utils,grDevices,graphics,stats,methods -e 'try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f31104d3a7.pid")), silent = TRUE)' -e 'options(socketOptions = "no-delay")' -e 'invisible({Sys.sleep(6)})' -e 'workRSOCK <- tryCatch(parallel:::.workRSOCK, error=function(e) parallel:::.slaveRSOCK); workRSOCK()' MASTER=localhost PORT=11570 OUT=/dev/null TIMEOUT=7 XDR=FALSE SETUPTIMEOUT=0.1 SETUPSTRATEGY=parallel
318s [01:13:53.144] [local output] Starting PSOCK main server
318s [01:13:53.144] [local output] Workers launched
318s [01:13:53.145] [local output] Waiting for workers to connect back
318s [01:13:53.145]  - [local output] 0 workers out of 1 ready
318s [01:13:53.246]  - [local output] 0 workers out of 1 ready
318s [01:13:53.356]  - [local output] 0 workers out of 1 ready
318s [01:13:53.456]  - [local output] 0 workers out of 1 ready
318s [01:13:53.557]  - [local output] 0 workers out of 1 ready
318s [01:13:53.658]  - [local output] 0 workers out of 1 ready
318s [01:13:53.758]  - [local output] 0 workers out of 1 ready
318s [01:13:53.859]  - [local output] 0 workers out of 1 ready
318s [01:13:53.960]  - [local output] 0 workers out of 1 ready
319s [01:13:54.060]  - [local output] 0 workers out of 1 ready
319s [01:13:54.161]  - [local output] 0 workers out of 1 ready
319s [01:13:54.262]  - [local output] 0 workers out of 1 ready
319s [01:13:54.362]  - [local output] 0 workers out of 1 ready
319s [01:13:54.463]  - [local output] 0 workers out of 1 ready
319s [01:13:54.564]  - [local output] 0 workers out of 1 ready
319s [01:13:54.664]  - [local output] 0 workers out of 1 ready
319s [01:13:54.765]  - [local output] 0 workers out of 1 ready
319s [01:13:54.866]  - [local output] 0 workers out of 1 ready
320s [01:13:54.967]  - [local output] 0 workers out of 1 ready
320s [01:13:55.067]  - [local output] 0 workers out of 1 ready
320s [01:13:55.168]  - [local output] 0 workers out of 1 ready
320s [01:13:55.269]  - [local output] 0 workers out of 1 ready
320s [01:13:55.370]  - [local output] 0 workers out of 1 ready
320s [01:13:55.470]  - [local output] 0 workers out of 1 ready
320s [01:13:55.571]  - [local output] 0 workers out of 1 ready
320s [01:13:55.672]  - [local output] 0 workers out of 1 ready
320s [01:13:55.772]  - [local output] 0 workers out of 1 ready
320s [01:13:55.874]  - [local output] 0 workers out of 1 ready
321s [01:13:55.975]  - [local output] 0 workers out of 1 ready
321s [01:13:56.076]  - [local output] 0 workers out of 1 ready
321s [01:13:56.176]  - [local output] 0 workers out of 1 ready
321s [01:13:56.277]  - [local output] 0 workers out of 1 ready
321s [01:13:56.378]  - [local output] 0 workers out of 1 ready
321s [01:13:56.479]  - [local output] 0 workers out of 1 ready
321s [01:13:56.579]  - [local output] 0 workers out of 1 ready
321s [01:13:56.680]  - [local output] 0 workers out of 1 ready
321s [01:13:56.781]  - [local output] 0 workers out of 1 ready
321s [01:13:56.881]  - [local output] 0 workers out of 1 ready
322s [01:13:56.982]  - [local output] 0 workers out of 1 ready
322s [01:13:57.083]  - [local output] 0 workers out of 1 ready
322s [01:13:57.184]  - [local output] 0 workers out of 1 ready
322s [01:13:57.284]  - [local output] 0 workers out of 1 ready
322s [01:13:57.385]  - [local output] 0 workers out of 1 ready
322s [01:13:57.486]  - [local output] 0 workers out of 1 ready
322s [01:13:57.586]  - [local output] 0 workers out of 1 ready
322s [01:13:57.687]  - [local output] 0 workers out of 1 ready
322s [01:13:57.787]  - [local output] 0 workers out of 1 ready
322s [01:13:57.888]  - [local output] 0 workers out of 1 ready
323s [01:13:57.989]  - [local output] 0 workers out of 1 ready
323s [01:13:58.090]  - [local output] 0 workers out of 1 ready
323s [01:13:58.190]  - [local output] 0 workers out of 1 ready
323s [01:13:58.291]  - [local output] 0 workers out of 1 ready
323s *** makeClusterPSOCK() ... DONE
323s <simpleError in parallelly::makeClusterPSOCK(1L, rscript_startup = quote(Sys.sleep(6)),     connectTimeout = 0.1, timeout = 7): Cluster setup failed (connectTimeout=5.1 seconds). 1 worker of 1 failed to connect.>
323s > 
323s > message("*** makeClusterPSOCK() ... DONE")
323s > 
323s > source("incl/end.R")
323s > 
323s BEGIN TEST options-and-envvars.R
323s 
323s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
323s Copyright (C) 2024 The R Foundation for Statistical Computing
323s Platform: s390x-ibm-linux-gnu (64-bit)
323s 
323s R is free software and comes with ABSOLUTELY NO WARRANTY.
323s You are welcome to redistribute it under certain conditions.
323s Type 'license()' or 'licence()' for distribution details.
323s 
323s R is a collaborative project with many contributors.
323s Type 'contributors()' for more information and
323s 'citation()' on how to cite R or R packages in publications.
323s 
323s Type 'demo()' for some demos, 'help()' for on-line help, or
323s 'help.start()' for an HTML browser interface to help.
323s Type 'q()' to quit R.
323s 
323s > source("incl/start.R")
323s > 
323s > getOption2 <- parallelly:::getOption2
323s > getEnvVar2 <- parallelly:::getEnvVar2
323s > 
323s > options(parallelly.some.option = NULL)
323s > options(parallelly.some.option = NULL)
323s > Sys.unsetenv("R_FUTURE_SOME_ENVVAR")
323s > Sys.unsetenv("R_PARALLELLY_SOME_ENVVAR")
323s > 
323s > 
323s > message("*** Options and environment variables ...")
323s *** Options and environment variables ...
323s > 
323s > showall <- function() {
323s +   utils::str(list(
323s +     future.some.setting       = getOption("future.some.setting", NULL),
323s +     parallelly.some.setting   = getOption("parallelly.some.setting", NULL),
323s +     R_FUTURE_SOME_SETTING     = Sys.getenv("R_FUTURE_SOME_SETTING", ""),
323s +     R_PARALLELLY_SOME_SETTING = Sys.getenv("R_PARALLELLY_SOME_SETTING", "")
323s +   ))
323s + }
323s > 
323s > for (what in c("option", "envvar")) {
323s +   if (what == "option") {
323s +     setvalue <- function(name, value) {
323s +       name <- sprintf("%s.some.setting", tolower(name))
323s +       if (is.null(value)) {
323s +         args <- list(NULL)
323s +       } else {
323s +         args <- as.list(value)
323s +       }
323s +       names(args) <- name
323s +       do.call(options, args = args)
323s +       class(args) <- "option"
323s +       args
323s +     }
323s +   } else if (what == "envvar") {
323s +     setvalue <- function(name, value) {
323s +       name <- sprintf("R_%s_SOME_SETTING", toupper(name))
323s +       if (is.null(value)) {
323s +         Sys.unsetenv(name)
323s +         args <- list(NULL)
323s +         names(args) <- name
323s +       } else {
323s +         args <- as.list(value)
323s +         names(args) <- name
323s +         do.call(Sys.setenv, args = args)
323s +       }
323s +       class(args) <- "envvar"
323s +       args
323s +     }
323s +   }
323s +   
323s +   for (name in c("future", "parallelly")) {
323s +     for (value0 in list(NULL, TRUE)) {
323s +       args <- setvalue(name, value0)
323s +       stopifnot(inherits(args, what))
323s +       showall()
323s +       
323s +       if (is.null(value0)) {
323s +         message("- getOption2()")
323s +         value <- getOption2("future.some.setting", NA)
323s +         stopifnot(is.na(value))
323s +         value <- getOption2("parallelly.some.setting", NA)
323s +         stopifnot(is.na(value))
323s +         
323s +         message("- getEnvVar2()")
323s +         value <- getEnvVar2("R_FUTURE_SOME_ENVVAR", NA)
323s +         stopifnot(is.na(value))
323s +         value <- getEnvVar2("R_PARALLELLY_SOME_ENVVAR", NA)
323s +         stopifnot(is.na(value))
323s +       } else if (isTRUE(value0)) {
323s +         if (what == "option") {
323s +           message("- getOption2()")
323s +           value1 <- getOption2("future.some.setting", NA)
323s +           stopifnot(isTRUE(value1))
323s +           value2 <- getOption2("parallelly.some.setting", NA)
323s +           stopifnot(isTRUE(value2))
323s +         } else if (what == "envvar") {
323s +           message("- getEnvVar2()")
323s +           value1 <- getEnvVar2("R_FUTURE_SOME_SETTING", NA)
323s +           stopifnot(value1 == "TRUE")
323s +           value2 <- getEnvVar2("R_PARALLELLY_SOME_SETTING", NA)
323s +           stopifnot(value2 == "TRUE")
323s +         }
323s +         stopifnot(identical(value1, value2))
323s +       }
323s + 
323s +       args <- setvalue(name, NULL)
323s +       stopifnot(inherits(args, what), is.null(args[[1]]))
323s +     } ## for (value ...)
323s +   } ## for (name ...)
323s + } ## for (what ...)
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s - getEnvVar2()
323s List of 4
323s  $ future.some.setting      : logi TRUE
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s List- getEnvVar2()
323s  of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : logi TRUE
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s - getEnvVar2()
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr "TRUE"
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getEnvVar2()
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr ""
323s - getOption2()
323s - getEnvVar2()
323s List of 4
323s  $ future.some.setting      : NULL
323s  $ parallelly.some.setting  : NULL
323s  $ R_FUTURE_SOME_SETTING    : chr ""
323s  $ R_PARALLELLY_SOME_SETTING: chr "TRUE"
323s - getEnvVar2()
323s > 
323s > 
323s > message("*** Options and environment variables ... DONE")
323s > 
323s *** Options and environment variables ... DONE
323s > source("incl/end.R")
323s > 
323s BEGIN TEST r_bug18119.R
323s 
323s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
323s Copyright (C) 2024 The R Foundation for Statistical Computing
323s Platform: s390x-ibm-linux-gnu (64-bit)
323s 
323s R is free software and comes with ABSOLUTELY NO WARRANTY.
323s You are welcome to redistribute it under certain conditions.
323s Type 'license()' or 'licence()' for distribution details.
323s 
323s R is a collaborative project with many contributors.
323s Type 'contributors()' for more information and
323s 'citation()' on how to cite R or R packages in publications.
323s 
323s Type 'demo()' for some demos, 'help()' for on-line help, or
323s 'help.start()' for an HTML browser interface to help.
323s Type 'q()' to quit R.
323s 
323s > source("incl/start.R")
323s > *** R bug #18119 ...
323s r_version_has_bug18119(<current>): FALSE
323s 
323s > r_version_has_bug18119 <- function() {
323s +   parallelly:::r_version_has_bug18119(force = TRUE)
323s + }
323s > 
323s > affected_by_bug18119 <- function() {
323s +   parallelly:::affected_by_bug18119(force = TRUE)
323s + }
323s > 
323s > 
323s > message("*** R bug #18119 ...")
323s > 
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<current>): ", has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="3.5.3")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 3.5.3>): ", has)
323s r_version_has_bug18119(<R 3.5.3>): FALSE
323s > stopifnot(!has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="4.0.0")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 4.0.0>): ", has)
323s > r_version_has_bug18119(<R 4.0.0>): TRUE
323s stopifnot(has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="4.0.5")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 4.0.5>): ", has)
323s > r_version_has_bug18119(<R 4.0.5>): TRUE
323s stopifnot(has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="4.1.0")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 4.1.0>): ", has)
323s > r_version_has_bug18119(<R 4.1.0>): TRUE
323s stopifnot(has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="4.1.1")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 4.1.1>): ", has)
323s r_version_has_bug18119(<R 4.1.1>): FALSE
323s > stopifnot(!has)
323s > 
323s > Sys.setenv(R_PARALLELLY_R_VERSION="4.2.0")
323s > has <- r_version_has_bug18119()
323s > message("r_version_has_bug18119(<R 4.2.0>): ", has)
323s > stopifnot(!has)
323s r_version_has_bug18119(<R 4.2.0>): FALSE
323s > 
323s > message("*** R bug #18119 ... DONE")
323s *** R bug #18119 ... DONE
323s > 
323s > source("incl/end.R")
323s > 
323s BEGIN TEST startup.R
323s 
323s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
323s Copyright (C) 2024 The R Foundation for Statistical Computing
323s Platform: s390x-ibm-linux-gnu (64-bit)
323s 
323s R is free software and comes with ABSOLUTELY NO WARRANTY.
323s You are welcome to redistribute it under certain conditions.
323s Type 'license()' or 'licence()' for distribution details.
323s 
323s R is a collaborative project with many contributors.
323s Type 'contributors()' for more information and
323s 'citation()' on how to cite R or R packages in publications.
323s 
323s Type 'demo()' for some demos, 'help()' for on-line help, or
323s 'help.start()' for an HTML browser interface to help.
323s Type 'q()' to quit R.
323s 
324s > source("incl/start.R")
324s > 
324s > pkgname <- "parallelly"
324s > .onLoad <- parallelly:::.onLoad
324s > 
324s > maxCores <- min(2L, availableCores(methods = "system"))
324s > 
324s > 
324s > message("*** .onLoad() ...")
324s *** .onLoad() ...
324s - .onLoad() w/ parallelly.availableCores.system = 1L ...
324s > 
324s > message("- .onLoad() w/ parallelly.availableCores.system = 1L ...")
324s > options(parallelly.availableCores.system = 1L)
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.051] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.052] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.052] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.052] Environment variable ‘R_PARALLELLY_AVAILABLECORES_FALLBACK’ not set
324s [01:13:59.053] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.053] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.053] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.053] Already set: ‘1’
324s [01:13:59.053] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.054] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.054] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.054] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.054] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.055] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.055] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.055] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.055] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.056] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.056] Set package option ‘parallelly.fork.enable’
324s [01:13:59.056] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.056] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.057] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.057] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.057] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.057] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.058] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.058] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.058] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.058] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.059] R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s [01:13:59.059] Coercing from character to numeric: ‘120’
324s [01:13:59.059] => options(“parallelly.makeNodePSOCK.connectTimeout” = ‘120’) [n=1, mode=double]
324s [01:13:59.059] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.060] R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s [01:13:59.060] Coercing from character to numeric: ‘120’
324s [01:13:59.060] => options(“parallelly.makeNodePSOCK.timeout” = ‘120’) [n=1, mode=double]
324s [01:13:59.060] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.060] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.061] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.061] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.061] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.061] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.062] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.062] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.062] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.062] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.063] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.063] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.063] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.063] R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.063] => options(“parallelly.makeNodePSOCK.rscript_label” = ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’) [n=1, mode=character]
324s [01:13:59.064] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.064] R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s [01:13:59.064] => options(“parallelly.makeNodePSOCK.sessionInfo.pkgs” = ‘TRUE’) [n=1, mode=character]
324s [01:13:59.064] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.065] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.065] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.065] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.065] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.066] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.066] parallelly-specific environment variables:
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > options(parallelly.availableCores.system = NULL)
324s > message("- .onLoad() w/ parallelly.availableCores.system = 1L ... DONE")
324s - .onLoad() w/ parallelly.availableCores.system = 1L ... DONE
324s - .onLoad() w/ R_PARALLELLY_AVAILABLECORES_SYSTEM ...
324s > 
324s > message("- .onLoad() w/ R_PARALLELLY_AVAILABLECORES_SYSTEM ...")
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_SYSTEM = "1")
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.069] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.070] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.070] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.070] Environment variable ‘R_PARALLELLY_AVAILABLECORES_FALLBACK’ not set
324s [01:13:59.070] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.071] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.071] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.071] R_PARALLELLY_AVAILABLECORES_SYSTEM=‘1’
324s [01:13:59.071] Coercing from character to integer: ‘1’
324s [01:13:59.071] => options(“parallelly.availableCores.system” = ‘1’) [n=1, mode=integer]
324s [01:13:59.071] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.072] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.072] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.072] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.072] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.072] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.073] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.073] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.073] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.073] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.073] Set package option ‘parallelly.fork.enable’
324s [01:13:59.074] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.074] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.074] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.074] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.074] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.074] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.075] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.075] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.075] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.075] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.075] Already set: ‘120’
324s [01:13:59.076] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.076] Already set: ‘120’
324s [01:13:59.076] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.076] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.076] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.076] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.077] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.077] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.077] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.077] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.077] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.078] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.078] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.078] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.078] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.078] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.079] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.079] Already set: ‘TRUE’
324s [01:13:59.079] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.079] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.079] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.080] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.080] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.080] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.080] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_SYSTEM=‘1’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > ncores <- getOption("parallelly.availableCores.system")
324s > print(ncores)
324s [1] 1
324s > stopifnot(is.integer(ncores), ncores == 1L)
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_SYSTEM")
324s > options(parallelly.availableCores.system = NULL)
324s > 
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_SYSTEM = "NA")
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.081] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.082] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.082] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.082] Environment variable ‘R_PARALLELLY_AVAILABLECORES_FALLBACK’ not set
324s [01:13:59.082] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.082] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.083] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.083] R_PARALLELLY_AVAILABLECORES_SYSTEM=‘NA’
324s [01:13:59.083] Coercing from character to integer: ‘NA’
324s [01:13:59.083] => options(“parallelly.availableCores.system” = ‘NA’) [n=1, mode=integer]
324s [01:13:59.083] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.084] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.084] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.084] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.085] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.085] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.085] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.085] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.085] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.086] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.086] Set package option ‘parallelly.fork.enable’
324s > ncores <- getOption("parallelly.availableCores.system")
324s > [01:13:59.086] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.086] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.086] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.087] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.087] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.087] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.087] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.087] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.087] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.088] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.088] Already set: ‘120’
324s [01:13:59.088] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.088] Already set: ‘120’
324s [01:13:59.088] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.088] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.088] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.089] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.089] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.089] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.089] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.089] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.089] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.090] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.090] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.090] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.090] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.090] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.090] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.091] Already set: ‘TRUE’
324s [01:13:59.091] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.091] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.091] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.091] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.091] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.092] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.092] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_SYSTEM=‘NA’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s print(ncores)
324s [1] NA
324s > stopifnot(is.integer(ncores), is.na(ncores))
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_SYSTEM")
324s > options(parallelly.availableCores.system = NULL)
324s > 
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_SYSTEM = "NA_real_")
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.093] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.093] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.093] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.093] Environment variable ‘R_PARALLELLY_AVAILABLECORES_FALLBACK’ not set
324s [01:13:59.094] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.094] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.094] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.094] R_PARALLELLY_AVAILABLECORES_SYSTEM=‘NA_real_’
324s [01:13:59.094] Coercing from character to integer: ‘NA’
324s [01:13:59.095] => options(“parallelly.availableCores.system” = ‘NA’) [n=1, mode=integer]
324s [01:13:59.095] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.095] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.095] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.095] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.096] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.096] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.096] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.096] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.096] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.097] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.097] Set package option ‘parallelly.fork.enable’
324s [01:13:59.097] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.097] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.098] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.098] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.098] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.098] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.098] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.099] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.099] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.099] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.099] Already set: ‘120’
324s [01:13:59.099] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.099] Already set: ‘120’
324s [01:13:59.100] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.100] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.100] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.100] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.100] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.101] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.101] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.101] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.101] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.101] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.102] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.102] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.102] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.102] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.102] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.102] Already set: ‘TRUE’
324s [01:13:59.103] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.103] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.103] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.103] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.103] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.104] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.104] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_SYSTEM=‘NA_real_’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > ncores <- getOption("parallelly.availableCores.system")
324s > print(ncores)
324s [1] NA
324s > stopifnot(is.integer(ncores), is.na(ncores))
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_SYSTEM")
324s > options(parallelly.availableCores.system = NULL)
324s > 
324s > message("- .onLoad() w/ R_PARALLELLY_AVAILABLECORES_SYSTEM ... DONE")
324s > 
324s > 
324s > message("- .onLoad() w/ parallelly.availableCores.fallback = 1L ...")
324s - .onLoad() w/ R_PARALLELLY_AVAILABLECORES_SYSTEM ... DONE
324s - .onLoad() w/ parallelly.availableCores.fallback = 1L ...
324s > options(parallelly.availableCores.fallback = 1L)
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.105] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.106] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.106] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.106] Already set: ‘1’
324s [01:13:59.106] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.106] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.107] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.107] Environment variable ‘R_PARALLELLY_AVAILABLECORES_SYSTEM’ not set
324s [01:13:59.107] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.107] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.107] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.108] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.108] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.108] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.108] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.108] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.109] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.109] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.109] Set package option ‘parallelly.fork.enable’
324s [01:13:59.109] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.109] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.110] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.110] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.110] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.110] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.110] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.110] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.111] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.111] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.111] Already set: ‘120’
324s [01:13:59.111] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.111] Already set: ‘120’
324s [01:13:59.111] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.112] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.112] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.112] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.112] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.112] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.113] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.113] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.113] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.113] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.113] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.114] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.114] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.114] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.114] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.114] Already set: ‘TRUE’
324s [01:13:59.114] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.114] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.115] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.115] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.115] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.115] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.116] parallelly-specific environment variables:
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s - .onLoad() w/ parallelly.availableCores.fallback = 1L ... DONE
324s - .onLoad() w/ R_PARALLELLY_AVAILABLECORES_FALLBACK ...
324s [01:13:59.116] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.117] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.117] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.117] R_PARALLELLY_AVAILABLECORES_FALLBACK=‘1’
324s [01:13:59.117] Coercing from character to integer: ‘1’
324s [01:13:59.117] => options(“parallelly.availableCores.fallback” = ‘1’) [n=1, mode=integer]
324s [01:13:59.117] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.118] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.118] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.118] Environment variable ‘R_PARALLELLY_AVAILABLECORES_SYSTEM’ not set
324s [01:13:59.118] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.118] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.118] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.119] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.119] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.119] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.119] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.119] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.120] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.120] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.120] Set package option ‘parallelly.fork.enable’
324s [01:13:59.120] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.120] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.121] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.121] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.121] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.121] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.121] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.122] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.122] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.122] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.122] Already set: ‘120’
324s [01:13:59.122] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.122] Already set: ‘120’
324s [01:13:59.123] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.123] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.123] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.123] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.123] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.124] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.124] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.124] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.124] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.124] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.124] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.125] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.125] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.125] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.125] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.125] Already set: ‘TRUE’
324s [01:13:59.125] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.126] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.126] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.126] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.126] Set pac> options(parallelly.availableCores.fallback = NULL)
324s > message("- .onLoad() w/ parallelly.availableCores.fallback = 1L ... DONE")
324s > 
324s > message("- .onLoad() w/ R_PARALLELLY_AVAILABLECORES_FALLBACK ...")
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_FALLBACK = "1")
324s > .onLoad(pkgname, pkgname)
324s > ncores <- getOption("parallelly.availableCores.fallback")
324s > print(ncores)
324s [1] 1
324s > stopifnot(is.integer(ncores), ncores == 1L)
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_FALLBACK")
324s > options(parallelly.availableCores.fallback = NULL)
324s > 
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_FALLBACK = "NA")
324s > .onLoad(pkgname, pkgname)
324s kage option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.126] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.127] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_FALLBACK=‘1’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s [01:13:59.127] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.127] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.128] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.128] R_PARALLELLY_AVAILABLECORES_FALLBACK=‘NA’
324s [01:13:59.128] Coercing from character to integer: ‘NA’
324s [01:13:59.128] => options(“parallelly.availableCores.fallback” = ‘NA’) [n=1, mode=integer]
324s [01:13:59.128] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.129] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.129] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.129] Environment variable ‘R_PARALLELLY_AVAILABLECORES_SYSTEM’ not set
324s [01:13:59.129] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.129] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.130] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.130] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.130] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.130] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.130] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.131] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.131] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.131] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.131] Set package option ‘parallelly.fork.enable’
324s [01:13:59.131] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.132] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.132] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.132] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.132] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.132] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.133] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.133] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.133] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.133] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.133] Already set: ‘120’
324s [01:13:59.133] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.134] Already set: ‘120’
324s [01:13:59.134] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.134] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.134] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.135] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.136] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.136] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.136] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.136] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.137] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.137] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.137] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.137] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.137] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.138] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.138] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.138] Already set: ‘TRUE’
324s [01:13:59.138] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.138] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.138] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.139] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.139] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.139] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.140] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_FALLBACK=‘NA’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > ncores <- getOption("parallelly.availableCores.fallback")
324s > print(ncores)
324s [1] NA
324s [01:13:59.141] Set package option ‘parallelly.availableCores.methods’
324s > stopifnot(is.integer(ncores), is.na(ncores))
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_FALLBACK")
324s > options(parallelly.availableCores.fallback = NULL)
324s > 
324s > Sys.setenv(R_PARALLELLY_AVAILABLECORES_FALLBACK = "NA_real_")
324s > .onLoad(pkgname, pkgname)
324s [01:13:59.141] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.141] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.141] R_PARALLELLY_AVAILABLECORES_FALLBACK=‘NA_real_’
324s [01:13:59.142] Coercing from character to integer: ‘NA’
324s [01:13:59.142] => options(“parallelly.availableCores.fallback” = ‘NA’) [n=1, mode=integer]
324s [01:13:59.142] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.142] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.142] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.142] Environment variable ‘R_PARALLELLY_AVAILABLECORES_SYSTEM’ not set
324s [01:13:59.143] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.143] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.143] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.143] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.143] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.144] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.144] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.144] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.144] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.144] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.144] Set package option ‘parallelly.fork.enable’
324s [01:13:59.145] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.145] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.145] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.145] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.145] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.146] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.146] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.146] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.146] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.147] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.147] Already set: ‘120’
324s [01:13:59.147] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.147] Already set: ‘120’
324s [01:13:59.147] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.147] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.147] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.148] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.148] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.148] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.148] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.149] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.149] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.149] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.149] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.149] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.150] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.150] Already set: ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s [01:13:59.150] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.150] Already set: ‘TRUE’
324s [01:13:59.150] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.150] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.151] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.151] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.151] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.151] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.152] parallelly-specific environment variables:
324s - R_PARALLELLY_AVAILABLECORES_FALLBACK=‘NA_real_’
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3198’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > ncores <- getOption("parallelly.availableCores.fallback")
324s - .onLoad() w/ R_PARALLELLY_AVAILABLECORES_FALLBACK ... DONE
324s *** .onLoad() ... DONE
324s > print(ncores)
324s [1] NA
324s > stopifnot(is.integer(ncores), is.na(ncores))
324s > Sys.unsetenv("R_PARALLELLY_AVAILABLECORES_FALLBACK")
324s > options(parallelly.availableCores.fallback = NULL)
324s > 
324s > message("- .onLoad() w/ R_PARALLELLY_AVAILABLECORES_FALLBACK ... DONE")
324s > 
324s > message("*** .onLoad() ... DONE")
324s > 
324s > 
324s > source("incl/end.R")
324s > 
324s BEGIN TEST utils.R
324s 
324s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
324s Copyright (C) 2024 The R Foundation for Statistical Computing
324s Platform: s390x-ibm-linux-gnu (64-bit)
324s 
324s R is free software and comes with ABSOLUTELY NO WARRANTY.
324s You are welcome to redistribute it under certain conditions.
324s Type 'license()' or 'licence()' for distribution details.
324s 
324s R is a collaborative project with many contributors.
324s Type 'contributors()' for more information and
324s 'citation()' on how to cite R or R packages in publications.
324s 
324s Type 'demo()' for some demos, 'help()' for on-line help, or
324s 'help.start()' for an HTML browser interface to help.
324s Type 'q()' to quit R.
324s 
324s > source("incl/start,load-only.R")
324s [01:13:59.384] Set package option ‘parallelly.availableCores.methods’
324s [01:13:59.385] Environment variable ‘R_PARALLELLY_AVAILABLECORES_METHODS’ not set
324s [01:13:59.385] Set package option ‘parallelly.availableCores.fallback’
324s [01:13:59.386] Environment variable ‘R_PARALLELLY_AVAILABLECORES_FALLBACK’ not set
324s [01:13:59.386] Set package option ‘parallelly.availableCores.min’
324s [01:13:59.386] Environment variable ‘R_PARALLELLY_AVAILABLECORES_MIN’ not set
324s [01:13:59.386] Set package option ‘parallelly.availableCores.system’
324s [01:13:59.387] Environment variable ‘R_PARALLELLY_AVAILABLECORES_SYSTEM’ not set
324s [01:13:59.387] Set package option ‘parallelly.availableCores.logical’
324s [01:13:59.387] Environment variable ‘R_PARALLELLY_AVAILABLECORES_LOGICAL’ not set
324s [01:13:59.388] Set package option ‘parallelly.availableCores.omit’
324s [01:13:59.388] Environment variable ‘R_PARALLELLY_AVAILABLECORES_OMIT’ not set
324s [01:13:59.388] Set package option ‘parallelly.availableWorkers.methods’
324s [01:13:59.388] Environment variable ‘R_PARALLELLY_AVAILABLEWORKERS_METHODS’ not set
324s [01:13:59.389] Set package option ‘parallelly.maxWorkers.localhost’
324s [01:13:59.389] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST’ not set
324s [01:13:59.389] Set package option ‘parallelly.maxWorkers.localhost.ignore’
324s [01:13:59.389] Environment variable ‘R_PARALLELLY_MAXWORKERS_LOCALHOST_IGNORE’ not set
324s [01:13:59.390] Set package option ‘parallelly.fork.enable’
324s [01:13:59.390] Environment variable ‘R_PARALLELLY_FORK_ENABLE’ not set
324s [01:13:59.390] Set package option ‘parallelly.supportsMulticore.disableOn’
324s [01:13:59.390] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_DISABLEON’ not set
324s [01:13:59.391] Set package option ‘parallelly.supportsMulticore.unstable’
324s [01:13:59.391] Environment variable ‘R_PARALLELLY_SUPPORTSMULTICORE_UNSTABLE’ not set
324s [01:13:59.391] Set package option ‘parallelly.makeNodePSOCK.setup_strategy’
324s [01:13:59.391] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SETUP_STRATEGY’ not set
324s [01:13:59.392] Set package option ‘parallelly.makeNodePSOCK.validate’
324s [01:13:59.392] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_VALIDATE’ not set
324s [01:13:59.392] Set package option ‘parallelly.makeNodePSOCK.connectTimeout’
324s [01:13:59.392] R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s [01:13:59.393] Coercing from character to numeric: ‘120’
324s [01:13:59.393] => options(“parallelly.makeNodePSOCK.connectTimeout” = ‘120’) [n=1, mode=double]
324s [01:13:59.393] Set package option ‘parallelly.makeNodePSOCK.timeout’
324s [01:13:59.394] R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s [01:13:59.394] Coercing from character to numeric: ‘120’
324s [01:13:59.394] => options(“parallelly.makeNodePSOCK.timeout” = ‘120’) [n=1, mode=double]
324s [01:13:59.394] Set package option ‘parallelly.makeNodePSOCK.useXDR’
324s [01:13:59.395] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_USEXDR’ not set
324s [01:13:59.395] Set package option ‘parallelly.makeNodePSOCK.socketOptions’
324s [01:13:59.395] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_SOCKETOPTIONS’ not set
324s [01:13:59.395] Set package option ‘parallelly.makeNodePSOCK.rshcmd’
324s [01:13:59.396] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHCMD’ not set
324s [01:13:59.396] Set package option ‘parallelly.makeNodePSOCK.rshopts’
324s [01:13:59.396] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_RSHOPTS’ not set
324s [01:13:59.396] Set package option ‘parallelly.makeNodePSOCK.tries’
324s [01:13:59.397] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES’ not set
324s [01:13:59.397] Set package option ‘parallelly.makeNodePSOCK.tries.delay’
324s [01:13:59.397] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_TRIES_DELAY’ not set
324s [01:13:59.397] Set package option ‘parallelly.makeNodePSOCK.rscript_label’
324s [01:13:59.398] R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3209’
324s [01:13:59.398] => options(“parallelly.makeNodePSOCK.rscript_label” = ‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3209’) [n=1, mode=character]
324s [01:13:59.398] Set package option ‘parallelly.makeNodePSOCK.sessionInfo.pkgs’
324s [01:13:59.398] R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s [01:13:59.399] => options(“parallelly.makeNodePSOCK.sessionInfo.pkgs” = ‘TRUE’) [n=1, mode=character]
324s [01:13:59.399] Set package option ‘parallelly.makeNodePSOCK.autoKill’
324s [01:13:59.399] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_AUTOKILL’ not set
324s [01:13:59.399] Set package option ‘parallelly.makeNodePSOCK.master.localhost.hostname’
324s [01:13:59.400] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_MASTER_LOCALHOST_HOSTNAME’ not set
324s [01:13:59.400] Set package option ‘parallelly.makeNodePSOCK.port.increment’
324s [01:13:59.400] Environment variable ‘R_PARALLELLY_MAKENODEPSOCK_PORT_INCREMENT’ not set
324s [01:13:59.401] parallelly-specific environment variables:
324s - R_PARALLELLY_MAKENODEPSOCK_CONNECTTIMEOUT=‘120’
324s - R_PARALLELLY_MAKENODEPSOCK_RSCRIPT_LABEL=‘parallelly/tests/UNKNOWN:autopkgtest:ubuntu:3209’
324s - R_PARALLELLY_MAKENODEPSOCK_SESSIONINFO_PKGS=‘TRUE’
324s - R_PARALLELLY_MAKENODEPSOCK_TIMEOUT=‘120’
324s > 
324s > message("*** utils ...")
324s > *** utils ...
324s 
324s > message("*** hpaste() ...")
324s > 
324s > # Some vectors
324s *** hpaste() ...
324s > x <- 1:6
324s > y <- 10:1
324s > z <- LETTERS[x]
324s > 
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s > # Abbreviation of output vector
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s > printf("x = %s.\n", hpaste(x))
324s x = 1, 2, 3, 4, 5, 6.
324s > ## x = 1, 2, 3, ..., 6.
324s > 
324s > printf("x = %s.\n", hpaste(x, maxHead = 2))
324s x = 1, 2, ..., 6.
324s > ## x = 1, 2, ..., 6.
324s > 
324s > printf("x = %s.\n", hpaste(x, maxHead = 3)) # Default
324s x = 1, 2, 3, ..., 6.
324s > ## x = 1, 2, 3, ..., 6.
324s > 
324s > # It will never output 1, 2, 3, 4, ..., 6
324s > printf("x = %s.\n", hpaste(x, maxHead = 4))
324s x = 1, 2, 3, 4, 5, 6.
324s > ## x = 1, 2, 3, 4, 5 and 6.
324s > 
324s > # Showing the tail
324s > printf("x = %s.\n", hpaste(x, maxHead = 1, maxTail = 2))
324s x = 1, ..., 5, 6.
324s > ## x = 1, ..., 5, 6.
324s > 
324s > # Turning off abbreviation
324s > printf("y = %s.\n", hpaste(y, maxHead = Inf))
324s y = 10, 9, 8, 7, 6, 5, 4, 3, 2, 1.
324s > ## y = 10, 9, 8, 7, 6, 5, 4, 3, 2, 1
324s > 
324s > ## ...or simply
324s > printf("y = %s.\n", paste(y, collapse = ", "))
324s y = 10, 9, 8, 7, 6, 5, 4, 3, 2, 1.
324s > ## y = 10, 9, 8, 7, 6, 5, 4, 3, 2, 1
324s > 
324s > # Change last separator
324s > printf("x = %s.\n", hpaste(x, lastCollapse = " and "))
324s x = 1, 2, 3, 4, 5 and 6.
324s > ## x = 1, 2, 3, 4, 5 and 6.
324s > 
324s > # No collapse
324s > stopifnot(all(hpaste(x, collapse = NULL) == x))
324s > 
324s > # Empty input
324s > stopifnot(identical(hpaste(character(0)), character(0)))
324s > 
324s > message("*** hpaste() ... DONE")
324s > 
324s > 
324s *** hpaste() ... DONE
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s > # debug()
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s > message("*** mdebug() ...")
324s > *** mdebug() ...
324s 
324s > mdebug("Hello #", 1)
324s [01:13:59.429] Hello #1
324s > mdebugf("Hello #%d", 1)
324s > [01:13:59.430] Hello #1
324s options(parallelly.debug = TRUE)
324s > 
324s > mdebug("Hello #", 2)
324s [01:13:59.430] Hello #2
324s > mdebugf("Hello #%d", 2)
324s > [01:13:59.430] Hello #2
324s options(parallelly.debug = FALSE)
324s > 
324s > mdebug("Hello #", 3)
324s > mdebugf("Hello #%d", 3)
324s > 
324s > message("*** mdebug() ... DONE")
324s > 
324s > 
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s *** mdebug() ... DONE
324s > # pid_exists()
324s > # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
324s > message("*** pid_exists() ...")
324s > options(parallelly.debug = TRUE)
324s > 
324s > *** pid_exists() ...
324s pid <- Sys.getpid()
324s > printf("Current PID: %d\n", pid)
324s Current PID: 3209
324s > 
324s > exists <- pid_exists(pid)
324s Call: tools::pskill(3209, signal = 0L)
324s [01:13:59.432] Attempting to find a working pid_exists_*() function ...
324s [1] TRUE
324s Call: tools::pskill(3209, signal = 0L)
324s [1] TRUE
324s [01:13:59.432] - success
324s [01:13:59.432] Attempting to find a working pid_exists_*() function ... done
324s > printf("Does it exist: %s\n", exists)
324s Does it exist: TRUE
324s > 
324s > ## Either pid_exists() works and return TRUE here, or it fails
324s > ## to query the process information at all in case it returns NA
324s > ## However, it should never return FALSE.
324s > stopifnot(is.logical(exists), length(exists) == 1L,
324s +           isTRUE(exists) || is.na(exists))
324s > 
324s > message("*** pid_exists() ... DONE")
324s > 
324s > message("*** inRCmdCheck() ...")
324s > cat(sprintf("R CMD check is running: %s\n", inRCmdCheck()))
324s R CMD check is running: FALSE
324s > message("*** inRCmdCheck() ... DONE")
324s > 
324s > message("*** utils ... DONE")
324s > 
324s > source("incl/end.R")
324s *** pid_exists() ... DONE
324s *** inRCmdCheck() ...
324s *** inRCmdCheck() ... DONE
324s *** utils ... DONE
324s > 
324s /tmp/autopkgtest.7MbdOA/wrapper.sh: Killing leaked background processes: 3142 
324s     PID TTY      STAT   TIME COMMAND
324s    3142 ?        R      0:00 /usr/lib/R/bin/exec/R --no-echo --no-restore -e try(suppressWarnings(cat(Sys.getpid(),file="/tmp/RtmpBpvt9F/worker.rank=1.parallelly.parent=2291.8f31104d3a7.pid")),~+~silent~+~=~+~TRUE) -e options(socketOptions~+~=~+~"no-delay") -e invisible({Sys.sleep(6)}) -e workRSOCK~+~<-~+~tryCatch(parallel:::.workRSOCK,~+~error=function(e)~+~parallel:::.slaveRSOCK);~+~workRSOCK() --args MASTER=localhost PORT=11570 OUT=/dev/null TIMEOUT=7 XDR=FALSE SETUPTIMEOUT=0.1 SETUPSTRATEGY=parallel
324s autopkgtest [01:13:59]: test run-unit-test: -----------------------]
325s run-unit-test        PASS
325s autopkgtest [01:14:00]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
325s autopkgtest [01:14:00]: test pkg-r-autopkgtest: preparing testbed
328s Reading package lists...
328s Building dependency tree...
328s Reading state information...
329s Starting pkgProblemResolver with broken count: 0
329s Starting 2 pkgProblemResolver with broken count: 0
329s Done
329s The following additional packages will be installed:
329s   build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu
329s   dctrl-tools g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13
329s   gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13
329s   gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
329s   libatomic1 libblas-dev libbz2-dev libcc1-0 libgcc-13-dev libgfortran-13-dev
329s   libicu-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev
329s   liblapack-dev liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0
329s   libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev
329s   libstdc++-13-dev libubsan1 pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin
329s   r-base-dev zlib1g-dev
329s Suggested packages:
329s   cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib
329s   gcc-13-doc gcc-multilib autoconf automake libtool flex bison gdb gcc-doc
329s   gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib gfortran-doc
329s   gfortran-13-multilib gfortran-13-doc libcoarrays-dev liblapack-doc icu-doc
329s   liblzma-doc ncurses-doc readline-doc libstdc++-13-doc texlive-base
329s   texlive-latex-base texlive-plain-generic texlive-fonts-recommended
329s   texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
329s   texlive-latex-extra texinfo
329s Recommended packages:
329s   bzip2-doc libpng-tools
329s The following NEW packages will be installed:
329s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu
329s   cpp-s390x-linux-gnu dctrl-tools g++ g++-13 g++-13-s390x-linux-gnu
329s   g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu
329s   gfortran gfortran-13 gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu
329s   icu-devtools libasan8 libatomic1 libblas-dev libbz2-dev libcc1-0
329s   libgcc-13-dev libgfortran-13-dev libicu-dev libisl23 libitm1 libjpeg-dev
329s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
329s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
329s   libpkgconf3 libpng-dev libreadline-dev libstdc++-13-dev libubsan1 pkg-config
329s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
329s 0 upgraded, 52 newly installed, 0 to remove and 1 not upgraded.
329s Need to get 82.5 MB/82.5 MB of archives.
329s After this operation, 282 MB of additional disk space will be used.
329s Get:1 /tmp/autopkgtest.7MbdOA/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B]
329s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB]
330s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB]
330s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [9935 kB]
333s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-21ubuntu1 [1026 B]
333s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B]
333s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB]
333s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240315-1ubuntu1 [50.0 kB]
333s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240315-1ubuntu1 [31.1 kB]
333s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240315-1ubuntu1 [9396 B]
333s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240315-1ubuntu1 [2997 kB]
333s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240315-1ubuntu1 [1186 kB]
333s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-21ubuntu1 [1003 kB]
334s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [19.1 MB]
335s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-21ubuntu1 [469 kB]
335s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B]
335s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B]
335s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-21ubuntu1 [2494 kB]
335s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [11.3 MB]
336s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-21ubuntu1 [14.4 kB]
336s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B]
336s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B]
336s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
336s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB]
336s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-21ubuntu1 [623 kB]
336s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-21ubuntu1 [10.4 MB]
337s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-21ubuntu1 [10.9 kB]
337s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B]
337s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B]
337s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB]
337s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB]
337s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB]
337s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB]
337s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB]
337s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
337s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
337s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB]
338s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB]
338s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB]
338s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB]
338s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B]
338s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB]
338s Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB]
338s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g-dev s390x 1:1.3.dfsg-3.1ubuntu1 [904 kB]
338s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng-dev s390x 1.6.43-3 [277 kB]
338s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline-dev s390x 8.2-4 [189 kB]
338s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB]
338s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB]
338s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B]
338s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma-dev s390x 5.6.0-0.2 [185 kB]
338s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-base-dev all 4.3.3-2build1 [4334 B]
338s Get:52 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
338s Fetched 82.5 MB in 9s (9177 kB/s)
338s Selecting previously unselected package libisl23:s390x.
338s (Reading database ... 
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(Reading database ... 83436 files and directories currently installed.)
338s Preparing to unpack .../00-libisl23_0.26-3_s390x.deb ...
338s Unpacking libisl23:s390x (0.26-3) ...
338s Selecting previously unselected package libmpc3:s390x.
338s Preparing to unpack .../01-libmpc3_1.3.1-1_s390x.deb ...
338s Unpacking libmpc3:s390x (1.3.1-1) ...
338s Selecting previously unselected package cpp-13-s390x-linux-gnu.
338s Preparing to unpack .../02-cpp-13-s390x-linux-gnu_13.2.0-21ubuntu1_s390x.deb ...
338s Unpacking cpp-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
339s Selecting previously unselected package cpp-13.
339s Preparing to unpack .../03-cpp-13_13.2.0-21ubuntu1_s390x.deb ...
339s Unpacking cpp-13 (13.2.0-21ubuntu1) ...
339s Selecting previously unselected package cpp-s390x-linux-gnu.
339s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
339s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
339s Selecting previously unselected package cpp.
339s Preparing to unpack .../05-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ...
339s Unpacking cpp (4:13.2.0-7ubuntu1) ...
339s Selecting previously unselected package libcc1-0:s390x.
339s Preparing to unpack .../06-libcc1-0_14-20240315-1ubuntu1_s390x.deb ...
339s Unpacking libcc1-0:s390x (14-20240315-1ubuntu1) ...
339s Selecting previously unselected package libitm1:s390x.
339s Preparing to unpack .../07-libitm1_14-20240315-1ubuntu1_s390x.deb ...
339s Unpacking libitm1:s390x (14-20240315-1ubuntu1) ...
339s Selecting previously unselected package libatomic1:s390x.
339s Preparing to unpack .../08-libatomic1_14-20240315-1ubuntu1_s390x.deb ...
339s Unpacking libatomic1:s390x (14-20240315-1ubuntu1) ...
339s Selecting previously unselected package libasan8:s390x.
339s Preparing to unpack .../09-libasan8_14-20240315-1ubuntu1_s390x.deb ...
339s Unpacking libasan8:s390x (14-20240315-1ubuntu1) ...
339s Selecting previously unselected package libubsan1:s390x.
339s Preparing to unpack .../10-libubsan1_14-20240315-1ubuntu1_s390x.deb ...
339s Unpacking libubsan1:s390x (14-20240315-1ubuntu1) ...
339s Selecting previously unselected package libgcc-13-dev:s390x.
339s Preparing to unpack .../11-libgcc-13-dev_13.2.0-21ubuntu1_s390x.deb ...
339s Unpacking libgcc-13-dev:s390x (13.2.0-21ubuntu1) ...
339s Selecting previously unselected package gcc-13-s390x-linux-gnu.
339s Preparing to unpack .../12-gcc-13-s390x-linux-gnu_13.2.0-21ubuntu1_s390x.deb ...
339s Unpacking gcc-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
339s Selecting previously unselected package gcc-13.
339s Preparing to unpack .../13-gcc-13_13.2.0-21ubuntu1_s390x.deb ...
339s Unpacking gcc-13 (13.2.0-21ubuntu1) ...
339s Selecting previously unselected package gcc-s390x-linux-gnu.
339s Preparing to unpack .../14-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
339s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
339s Selecting previously unselected package gcc.
339s Preparing to unpack .../15-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ...
339s Unpacking gcc (4:13.2.0-7ubuntu1) ...
339s Selecting previously unselected package libstdc++-13-dev:s390x.
339s Preparing to unpack .../16-libstdc++-13-dev_13.2.0-21ubuntu1_s390x.deb ...
339s Unpacking libstdc++-13-dev:s390x (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package g++-13-s390x-linux-gnu.
340s Preparing to unpack .../17-g++-13-s390x-linux-gnu_13.2.0-21ubuntu1_s390x.deb ...
340s Unpacking g++-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package g++-13.
340s Preparing to unpack .../18-g++-13_13.2.0-21ubuntu1_s390x.deb ...
340s Unpacking g++-13 (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package g++-s390x-linux-gnu.
340s Preparing to unpack .../19-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
340s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
340s Selecting previously unselected package g++.
340s Preparing to unpack .../20-g++_4%3a13.2.0-7ubuntu1_s390x.deb ...
340s Unpacking g++ (4:13.2.0-7ubuntu1) ...
340s Selecting previously unselected package build-essential.
340s Preparing to unpack .../21-build-essential_12.10ubuntu1_s390x.deb ...
340s Unpacking build-essential (12.10ubuntu1) ...
340s Selecting previously unselected package dctrl-tools.
340s Preparing to unpack .../22-dctrl-tools_2.24-3build2_s390x.deb ...
340s Unpacking dctrl-tools (2.24-3build2) ...
340s Selecting previously unselected package libgfortran-13-dev:s390x.
340s Preparing to unpack .../23-libgfortran-13-dev_13.2.0-21ubuntu1_s390x.deb ...
340s Unpacking libgfortran-13-dev:s390x (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package gfortran-13-s390x-linux-gnu.
340s Preparing to unpack .../24-gfortran-13-s390x-linux-gnu_13.2.0-21ubuntu1_s390x.deb ...
340s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package gfortran-13.
340s Preparing to unpack .../25-gfortran-13_13.2.0-21ubuntu1_s390x.deb ...
340s Unpacking gfortran-13 (13.2.0-21ubuntu1) ...
340s Selecting previously unselected package gfortran-s390x-linux-gnu.
340s Preparing to unpack .../26-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
340s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
340s Selecting previously unselected package gfortran.
340s Preparing to unpack .../27-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ...
340s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
340s Selecting previously unselected package icu-devtools.
340s Preparing to unpack .../28-icu-devtools_74.2-1ubuntu1_s390x.deb ...
340s Unpacking icu-devtools (74.2-1ubuntu1) ...
340s Selecting previously unselected package libblas-dev:s390x.
340s Preparing to unpack .../29-libblas-dev_3.12.0-3_s390x.deb ...
340s Unpacking libblas-dev:s390x (3.12.0-3) ...
340s Selecting previously unselected package libbz2-dev:s390x.
340s Preparing to unpack .../30-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ...
340s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ...
340s Selecting previously unselected package libicu-dev:s390x.
340s Preparing to unpack .../31-libicu-dev_74.2-1ubuntu1_s390x.deb ...
340s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ...
341s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
341s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ...
341s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ...
341s Selecting previously unselected package libjpeg8-dev:s390x.
341s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
341s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
341s Selecting previously unselected package libjpeg-dev:s390x.
341s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
341s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
341s Selecting previously unselected package liblapack-dev:s390x.
341s Preparing to unpack .../35-liblapack-dev_3.12.0-3_s390x.deb ...
341s Unpacking liblapack-dev:s390x (3.12.0-3) ...
341s Selecting previously unselected package libncurses-dev:s390x.
341s Preparing to unpack .../36-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ...
341s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ...
341s Selecting previously unselected package libpcre2-16-0:s390x.
341s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ...
341s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ...
341s Selecting previously unselected package libpcre2-32-0:s390x.
341s Preparing to unpack .../38-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ...
341s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ...
341s Selecting previously unselected package libpcre2-posix3:s390x.
341s Preparing to unpack .../39-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ...
341s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ...
341s Selecting previously unselected package libpcre2-dev:s390x.
341s Preparing to unpack .../40-libpcre2-dev_10.42-4ubuntu1_s390x.deb ...
341s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ...
341s Selecting previously unselected package libpkgconf3:s390x.
341s Preparing to unpack .../41-libpkgconf3_1.8.1-2_s390x.deb ...
341s Unpacking libpkgconf3:s390x (1.8.1-2) ...
341s Selecting previously unselected package zlib1g-dev:s390x.
341s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu1_s390x.deb ...
341s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu1) ...
341s Selecting previously unselected package libpng-dev:s390x.
341s Preparing to unpack .../43-libpng-dev_1.6.43-3_s390x.deb ...
341s Unpacking libpng-dev:s390x (1.6.43-3) ...
341s Selecting previously unselected package libreadline-dev:s390x.
341s Preparing to unpack .../44-libreadline-dev_8.2-4_s390x.deb ...
341s Unpacking libreadline-dev:s390x (8.2-4) ...
341s Selecting previously unselected package pkgconf-bin.
341s Preparing to unpack .../45-pkgconf-bin_1.8.1-2_s390x.deb ...
341s Unpacking pkgconf-bin (1.8.1-2) ...
341s Selecting previously unselected package pkgconf:s390x.
341s Preparing to unpack .../46-pkgconf_1.8.1-2_s390x.deb ...
341s Unpacking pkgconf:s390x (1.8.1-2) ...
341s Selecting previously unselected package pkg-config:s390x.
341s Preparing to unpack .../47-pkg-config_1.8.1-2_s390x.deb ...
341s Unpacking pkg-config:s390x (1.8.1-2) ...
341s Selecting previously unselected package liblzma-dev:s390x.
341s Preparing to unpack .../48-liblzma-dev_5.6.0-0.2_s390x.deb ...
341s Unpacking liblzma-dev:s390x (5.6.0-0.2) ...
341s Selecting previously unselected package r-base-dev.
341s Preparing to unpack .../49-r-base-dev_4.3.3-2build1_all.deb ...
341s Unpacking r-base-dev (4.3.3-2build1) ...
341s Selecting previously unselected package pkg-r-autopkgtest.
341s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
341s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
341s Selecting previously unselected package autopkgtest-satdep.
341s Preparing to unpack .../51-2-autopkgtest-satdep.deb ...
341s Unpacking autopkgtest-satdep (0) ...
341s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ...
341s Setting up libncurses-dev:s390x (6.4+20240113-1ubuntu1) ...
341s Setting up libreadline-dev:s390x (8.2-4) ...
341s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ...
341s Setting up libpcre2-32-0:s390x (10.42-4ubuntu1) ...
341s Setting up libpkgconf3:s390x (1.8.1-2) ...
341s Setting up libmpc3:s390x (1.3.1-1) ...
341s Setting up libatomic1:s390x (14-20240315-1ubuntu1) ...
341s Setting up icu-devtools (74.2-1ubuntu1) ...
341s Setting up pkgconf-bin (1.8.1-2) ...
341s Setting up liblzma-dev:s390x (5.6.0-0.2) ...
341s Setting up libubsan1:s390x (14-20240315-1ubuntu1) ...
341s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3.1ubuntu1) ...
341s Setting up libpcre2-posix3:s390x (10.42-4ubuntu1) ...
341s Setting up libasan8:s390x (14-20240315-1ubuntu1) ...
341s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
341s Setting up libisl23:s390x (0.26-3) ...
341s Setting up libicu-dev:s390x (74.2-1ubuntu1) ...
341s Setting up libcc1-0:s390x (14-20240315-1ubuntu1) ...
341s Setting up libblas-dev:s390x (3.12.0-3) ...
341s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
341s Setting up dctrl-tools (2.24-3build2) ...
341s Setting up libitm1:s390x (14-20240315-1ubuntu1) ...
341s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ...
341s Setting up libpcre2-dev:s390x (10.42-4ubuntu1) ...
341s Setting up libpng-dev:s390x (1.6.43-3) ...
341s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
341s Setting up pkgconf:s390x (1.8.1-2) ...
341s Setting up cpp-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
341s Setting up liblapack-dev:s390x (3.12.0-3) ...
341s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
341s Setting up pkg-config:s390x (1.8.1-2) ...
341s Setting up libgcc-13-dev:s390x (13.2.0-21ubuntu1) ...
341s Setting up libgfortran-13-dev:s390x (13.2.0-21ubuntu1) ...
341s Setting up libstdc++-13-dev:s390x (13.2.0-21ubuntu1) ...
341s Setting up cpp-13 (13.2.0-21ubuntu1) ...
341s Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
341s Setting up gcc-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
341s Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
341s Setting up g++-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
341s Setting up gcc-13 (13.2.0-21ubuntu1) ...
341s Setting up cpp (4:13.2.0-7ubuntu1) ...
341s Setting up gfortran-13-s390x-linux-gnu (13.2.0-21ubuntu1) ...
341s Setting up g++-13 (13.2.0-21ubuntu1) ...
341s Setting up gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
341s Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
341s Setting up gcc (4:13.2.0-7ubuntu1) ...
341s Setting up gfortran-13 (13.2.0-21ubuntu1) ...
341s Setting up g++ (4:13.2.0-7ubuntu1) ...
341s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
341s Setting up build-essential (12.10ubuntu1) ...
341s Setting up gfortran (4:13.2.0-7ubuntu1) ...
341s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
341s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
341s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
341s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
341s Setting up r-base-dev (4.3.3-2build1) ...
341s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
341s Setting up autopkgtest-satdep (0) ...
341s Processing triggers for man-db (2.12.0-3build4) ...
342s Processing triggers for install-info (7.1-3build1) ...
342s Processing triggers for libc-bin (2.39-0ubuntu6) ...
345s (Reading database ... 85266 files and directories currently installed.)
345s Removing autopkgtest-satdep (0) ...
346s autopkgtest [01:14:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
346s autopkgtest [01:14:21]: test pkg-r-autopkgtest: [-----------------------
346s Test: Try to load the R library parallelly
346s 
346s R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
346s Copyright (C) 2024 The R Foundation for Statistical Computing
346s Platform: s390x-ibm-linux-gnu (64-bit)
346s 
346s R is free software and comes with ABSOLUTELY NO WARRANTY.
346s You are welcome to redistribute it under certain conditions.
346s Type 'license()' or 'licence()' for distribution details.
346s 
346s R is a collaborative project with many contributors.
346s Type 'contributors()' for more information and
346s 'citation()' on how to cite R or R packages in publications.
346s 
346s Type 'demo()' for some demos, 'help()' for on-line help, or
346s 'help.start()' for an HTML browser interface to help.
346s Type 'q()' to quit R.
346s 
346s > library('parallelly')
346s > 
346s > 
346s Other tests are currently unsupported!
346s They will be progressively added.
346s autopkgtest [01:14:21]: test pkg-r-autopkgtest: -----------------------]
347s autopkgtest [01:14:22]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
347s pkg-r-autopkgtest    PASS
347s autopkgtest [01:14:22]: @@@@@@@@@@@@@@@@@@@@ summary
347s run-unit-test        PASS
347s pkg-r-autopkgtest    PASS
359s Creating nova instance adt-noble-s390x-r-cran-parallelly-20240328-010835-juju-7f2275-prod-proposed-migration-environment-3-d64a032a-ec3d-4484-b2eb-356b121f6a6e from image adt/ubuntu-noble-s390x-server-20240327.img (UUID 4dc0c4c2-a3ae-40cd-8411-e7fc228c10ae)...