0s autopkgtest [19:26:06]: starting date and time: 2024-03-16 19:26:06+0000
  0s autopkgtest [19:26:06]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data
  0s autopkgtest [19:26:06]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.qxwzny2m/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-stringdb --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-3.secgroup --name adt-noble-s390x-r-bioc-stringdb-20240316-192606-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
245s autopkgtest [19:30:11]: testbed dpkg architecture: s390x
246s autopkgtest [19:30:12]: testbed apt version: 2.7.12
246s autopkgtest [19:30:12]: @@@@@@@@@@@@@@@@@@@@ test bed setup
246s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
247s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB]
247s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB]
247s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B]
247s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB]
247s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB]
247s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B]
247s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B]
247s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B]
247s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3758 kB]
247s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B]
247s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB]
247s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B]
249s Fetched 8740 kB in 2s (3770 kB/s)
250s Reading package lists...
252s Reading package lists...
252s Building dependency tree...
252s Reading state information...
252s Calculating upgrade...
252s The following packages will be REMOVED:
252s   libssl3
252s The following NEW packages will be installed:
252s   libssl3t64
252s The following packages have been kept back:
252s   curl
252s The following packages will be upgraded:
252s   openssl ubuntu-minimal ubuntu-standard
253s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded.
253s Need to get 2680 kB of archives.
253s After this operation, 23.6 kB of additional disk space will be used.
253s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB]
253s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB]
253s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB]
253s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB]
253s Fetched 2680 kB in 1s (3943 kB/s)
253s (Reading database ... 
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(Reading database ... 52171 files and directories currently installed.)
253s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ...
253s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ...
254s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested:
254s  wget depends on libssl3 (>= 3.0.0).
254s  tnftp depends on libssl3 (>= 3.0.0).
254s  tcpdump depends on libssl3 (>= 3.0.0).
254s  systemd-resolved depends on libssl3 (>= 3.0.0).
254s  systemd depends on libssl3 (>= 3.0.0).
254s  sudo depends on libssl3 (>= 3.0.0).
254s  s390-tools depends on libssl3 (>= 3.0.0).
254s  rsync depends on libssl3 (>= 3.0.0).
254s  python3-cryptography depends on libssl3 (>= 3.0.0).
254s  openssh-server depends on libssl3 (>= 3.0.10).
254s  openssh-client depends on libssl3 (>= 3.0.10).
254s  linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0).
254s  libsystemd-shared:s390x depends on libssl3 (>= 3.0.0).
254s  libssh-4:s390x depends on libssl3 (>= 3.0.0).
254s  libsasl2-modules:s390x depends on libssl3 (>= 3.0.0).
254s  libsasl2-2:s390x depends on libssl3 (>= 3.0.0).
254s  libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0).
254s  libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0).
254s  libnvme1 depends on libssl3 (>= 3.0.0).
254s  libkrb5-3:s390x depends on libssl3 (>= 3.0.0).
254s  libkmod2:s390x depends on libssl3 (>= 3.0.0).
254s  libfido2-1:s390x depends on libssl3 (>= 3.0.0).
254s  libcurl4:s390x depends on libssl3 (>= 3.0.0).
254s  libcryptsetup12:s390x depends on libssl3 (>= 3.0.0).
254s  kmod depends on libssl3 (>= 3.0.0).
254s  dhcpcd-base depends on libssl3 (>= 3.0.0).
254s  bind9-libs:s390x depends on libssl3 (>= 3.0.0).
254s 
254s (Reading database ... 
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(Reading database ... 52171 files and directories currently installed.)
254s Removing libssl3:s390x (3.0.10-1ubuntu4) ...
254s Selecting previously unselected package libssl3t64:s390x.
254s (Reading database ... 
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(Reading database ... 52160 files and directories currently installed.)
254s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ...
254s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ...
254s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ...
254s Unpacking ubuntu-minimal (1.536) over (1.535) ...
254s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ...
254s Unpacking ubuntu-standard (1.536) over (1.535) ...
254s Setting up ubuntu-minimal (1.536) ...
254s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ...
254s Setting up ubuntu-standard (1.536) ...
254s Setting up openssl (3.0.13-0ubuntu1) ...
254s Processing triggers for man-db (2.12.0-3) ...
254s Processing triggers for libc-bin (2.39-0ubuntu2) ...
254s Reading package lists...
255s Building dependency tree...
255s Reading state information...
255s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
255s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease
255s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease
255s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease
255s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease
256s Reading package lists...
256s Reading package lists...
257s Building dependency tree...
257s Reading state information...
257s Calculating upgrade...
257s The following packages have been kept back:
257s   curl
257s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
257s Reading package lists...
257s Building dependency tree...
257s Reading state information...
257s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
260s autopkgtest [19:30:26]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024
260s autopkgtest [19:30:26]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-stringdb
262s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-stringdb 2.14.0-1 (dsc) [2212 B]
262s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-stringdb 2.14.0-1 (tar) [8196 kB]
262s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-stringdb 2.14.0-1 (diff) [3020 B]
262s gpgv: Signature made Wed Nov 29 16:38:59 2023 UTC
262s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
262s gpgv:                issuer "tille@debian.org"
262s gpgv: Can't check signature: No public key
262s dpkg-source: warning: cannot verify inline signature for ./r-bioc-stringdb_2.14.0-1.dsc: no acceptable signature found
262s autopkgtest [19:30:28]: testing package r-bioc-stringdb version 2.14.0-1
262s autopkgtest [19:30:28]: build not needed
264s autopkgtest [19:30:30]: test pkg-r-autopkgtest: preparing testbed
265s Reading package lists...
265s Building dependency tree...
265s Reading state information...
266s Starting pkgProblemResolver with broken count: 0
266s Starting 2 pkgProblemResolver with broken count: 0
266s Done
266s The following additional packages will be installed:
266s   build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl
266s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
266s   g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13
266s   gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13
266s   gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
266s   libatomic1 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2
266s   libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1
266s   libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1
266s   libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 libjbig0
266s   libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
266s   liblapack-dev liblapack3 liblzma-dev libmpc3 libncurses-dev libnsl-dev
266s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
266s   libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
266s   libpixman-1-0 libpkgconf3 libpng-dev libpsl5t64 libreadline-dev libsharpyuv0
266s   libsm6 libstdc++-13-dev libtcl8.6 libthai-data libthai0 libtiff6
266s   libtirpc-dev libtk8.6 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2
266s   libxrender1 libxss1 libxt6 linux-libc-dev littler pkg-config
266s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev
266s   r-bioc-biocgenerics r-bioc-stringdb r-cran-bit r-cran-bit64 r-cran-bitops
266s   r-cran-blob r-cran-cachem r-cran-catools r-cran-chron r-cran-cli
266s   r-cran-cpp11 r-cran-dbi r-cran-fastmap r-cran-gdata r-cran-glue
266s   r-cran-gplots r-cran-gsubfn r-cran-gtools r-cran-hash r-cran-igraph
266s   r-cran-kernsmooth r-cran-lattice r-cran-lifecycle r-cran-littler
266s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-pkgconfig
266s   r-cran-pkgkitten r-cran-plogr r-cran-plotrix r-cran-plyr r-cran-png
266s   r-cran-proto r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rlang
266s   r-cran-rsqlite r-cran-runit r-cran-sqldf r-cran-vctrs rpcsvc-proto unzip
266s   x11-common xdg-utils zip zlib1g-dev
266s Suggested packages:
266s   cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib
266s   gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison
266s   gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib
266s   gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev
266s   liblapack-doc glibc-doc icu-doc liblzma-doc ncurses-doc readline-doc
266s   libstdc++-13-doc tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib
266s   r-base-html texlive-base texlive-latex-base texlive-plain-generic
266s   texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
266s   texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase
266s   r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray
266s   r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy
266s   r-bioc-deseq2 r-bioc-annotate r-cran-testthat r-cran-roxygen2 r-cran-knitr
266s   r-cran-rmarkdown r-cran-ff r-cran-covr r-cran-crayon r-cran-pillar
266s   r-cran-rpart r-cran-rmysql r-cran-boot r-cran-quantreg r-cran-zoo
266s   r-cran-getopt r-cran-digest r-cran-httr r-cran-inline r-cran-rpostgresql
266s Recommended packages:
266s   bzip2-doc manpages manpages-dev libc-devtools libpng-tools r-recommended
266s   r-doc-html r-cran-testthat r-cran-callr r-cran-covr r-cran-crayon
266s   r-cran-digest r-cran-htmltools r-cran-htmlwidgets r-cran-knitr
266s   r-cran-mockery r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot
266s   r-cran-rstudioapi r-cran-tibble r-cran-whoami r-cran-withr r-cran-bench
266s   r-cran-brio r-cran-decor r-cran-desc r-cran-ggplot2 r-cran-lobstr
266s   r-cran-progress r-cran-scales r-cran-dplyr r-cran-waldo r-cran-ape
266s   r-bioc-graph r-cran-rgl r-cran-vdiffr r-cran-lintr r-cran-tidyverse
266s   r-cran-abind r-cran-doparallel r-cran-foreach r-cran-iterators
266s   r-cran-itertools r-cran-xml r-cran-fs r-cran-pillar r-cran-usethis
266s   r-cran-dbitest r-cran-gert r-cran-gh r-cran-hms r-cran-rvest r-cran-xml2
266s   r-cran-svunit r-cran-generics r-cran-pkgdown r-cran-zeallot
266s   libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
266s   x11-xserver-utils
266s The following packages will be REMOVED:
266s   libcurl4 libpsl5
266s The following NEW packages will be installed:
266s   autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu
266s   cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config
266s   fonts-dejavu-core fonts-dejavu-mono g++ g++-13 g++-13-s390x-linux-gnu
266s   g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu
266s   gfortran gfortran-13 gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu
266s   icu-devtools libasan8 libatomic1 libblas-dev libblas3 libbz2-dev
266s   libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64
266s   libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev
266s   libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b
266s   libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
266s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev liblapack-dev liblapack3
266s   liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0
266s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0
266s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
266s   libpng-dev libpsl5t64 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev
266s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1
266s   libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6
266s   linux-libc-dev littler pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin
266s   r-base-core r-base-dev r-bioc-biocgenerics r-bioc-stringdb r-cran-bit
266s   r-cran-bit64 r-cran-bitops r-cran-blob r-cran-cachem r-cran-catools
266s   r-cran-chron r-cran-cli r-cran-cpp11 r-cran-dbi r-cran-fastmap r-cran-gdata
266s   r-cran-glue r-cran-gplots r-cran-gsubfn r-cran-gtools r-cran-hash
266s   r-cran-igraph r-cran-kernsmooth r-cran-lattice r-cran-lifecycle
266s   r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise
266s   r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plotrix r-cran-plyr
266s   r-cran-png r-cran-proto r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl
266s   r-cran-rlang r-cran-rsqlite r-cran-runit r-cran-sqldf r-cran-vctrs
266s   rpcsvc-proto unzip x11-common xdg-utils zip zlib1g-dev
266s The following packages will be upgraded:
266s   curl
266s 1 upgraded, 149 newly installed, 2 to remove and 0 not upgraded.
266s Need to get 162 MB/162 MB of archives.
266s After this operation, 440 MB of additional disk space will be used.
266s Get:1 /tmp/autopkgtest.gvBVGL/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [744 B]
266s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB]
266s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB]
266s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB]
267s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB]
267s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB]
267s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB]
267s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB]
267s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB]
267s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB]
267s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB]
267s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB]
267s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB]
267s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB]
267s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B]
267s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B]
267s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB]
267s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB]
267s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB]
267s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB]
267s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B]
267s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB]
267s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB]
267s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB]
267s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB]
268s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB]
268s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B]
268s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B]
268s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB]
268s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB]
268s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB]
268s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B]
268s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B]
268s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
268s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB]
268s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB]
268s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
268s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
268s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB]
268s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB]
268s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB]
268s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB]
268s Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB]
268s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB]
269s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB]
269s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B]
269s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B]
269s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB]
269s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB]
269s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB]
269s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB]
269s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB]
269s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB]
269s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B]
269s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB]
269s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB]
269s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB]
269s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB]
269s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB]
269s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB]
269s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB]
269s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB]
269s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB]
269s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB]
269s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB]
269s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
269s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
269s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
269s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB]
269s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB]
269s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB]
269s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB]
269s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB]
269s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB]
269s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB]
269s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB]
269s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB]
269s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B]
269s Get:79 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB]
269s Get:80 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB]
269s Get:81 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B]
269s Get:82 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB]
269s Get:83 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB]
269s Get:84 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB]
269s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB]
269s Get:86 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB]
269s Get:87 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB]
269s Get:88 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB]
269s Get:89 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB]
270s Get:90 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB]
270s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB]
270s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB]
270s Get:93 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB]
270s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B]
270s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB]
270s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB]
270s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB]
270s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB]
270s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB]
270s Get:100 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB]
270s Get:101 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB]
270s Get:102 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B]
270s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB]
271s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB]
271s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B]
271s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB]
271s Get:107 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B]
271s Get:108 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
271s Get:109 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB]
271s Get:110 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB]
271s Get:111 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-proto all 1.0.0-3build1 [468 kB]
271s Get:112 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gsubfn all 0.7-2 [348 kB]
271s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB]
271s Get:114 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB]
271s Get:115 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB]
271s Get:116 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB]
271s Get:117 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB]
271s Get:118 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
271s Get:119 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
271s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB]
271s Get:121 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB]
271s Get:122 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB]
271s Get:123 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB]
271s Get:124 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB]
271s Get:125 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
271s Get:126 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB]
271s Get:127 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB]
271s Get:128 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB]
271s Get:129 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-chron s390x 2.3-61-2 [186 kB]
271s Get:130 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sqldf all 0.4-11-2 [77.2 kB]
271s Get:131 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB]
271s Get:132 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB]
271s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB]
271s Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
271s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB]
271s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB]
271s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-igraph s390x 1.6.0-1 [4519 kB]
272s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB]
272s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1build1 [794 kB]
272s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
272s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gtools s390x 3.9.5-1 [340 kB]
272s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-catools s390x 1.18.2-1 [201 kB]
272s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB]
272s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-kernsmooth s390x 2.23-22-1 [93.0 kB]
272s Get:145 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gdata all 3.0.0-1 [483 kB]
272s Get:146 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gplots all 3.1.3.1-1 [589 kB]
272s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hash all 2.2.6.3-1 [185 kB]
272s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plotrix all 3.8-4-1 [1120 kB]
272s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-stringdb all 2.14.0-1 [8345 kB]
272s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-runit all 0.4.32-3 [283 kB]
272s Preconfiguring packages ...
272s Fetched 162 MB in 6s (27.5 MB/s)
273s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52173 files and directories currently installed.)
273s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ...
273s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ...
273s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested:
273s  wget depends on libpsl5 (>= 0.16.0).
273s  libcurl4:s390x depends on libpsl5 (>= 0.16.0).
273s  libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0).
273s 
273s (Reading database ... 
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(Reading database ... 35%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52173 files and directories currently installed.)
273s Removing libpsl5:s390x (0.21.2-1build1) ...
273s Selecting previously unselected package libpsl5t64:s390x.
273s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
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(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52168 files and directories currently installed.)
273s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ...
273s Unpacking libpsl5t64:s390x (0.21.2-1.1) ...
273s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested:
273s  s390-tools depends on libcurl4 (>= 7.16.2).
273s 
273s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52174 files and directories currently installed.)
273s Removing libcurl4:s390x (8.5.0-2ubuntu2) ...
273s Selecting previously unselected package libcurl4t64:s390x.
273s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52169 files and directories currently installed.)
273s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ...
273s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ...
273s Selecting previously unselected package libc-dev-bin.
273s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ...
273s Unpacking libc-dev-bin (2.39-0ubuntu2) ...
273s Selecting previously unselected package linux-libc-dev:s390x.
273s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ...
273s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ...
273s Selecting previously unselected package libcrypt-dev:s390x.
273s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ...
273s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ...
273s Selecting previously unselected package libtirpc-dev:s390x.
273s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ...
273s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ...
273s Selecting previously unselected package libnsl-dev:s390x.
273s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ...
273s Unpacking libnsl-dev:s390x (1.3.0-3) ...
273s Selecting previously unselected package rpcsvc-proto.
273s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ...
273s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
273s Selecting previously unselected package libc6-dev:s390x.
273s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ...
273s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ...
273s Selecting previously unselected package libisl23:s390x.
273s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ...
273s Unpacking libisl23:s390x (0.26-3) ...
273s Selecting previously unselected package libmpc3:s390x.
273s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ...
273s Unpacking libmpc3:s390x (1.3.1-1) ...
273s Selecting previously unselected package cpp-13-s390x-linux-gnu.
273s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ...
273s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
273s Selecting previously unselected package cpp-13.
273s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ...
273s Unpacking cpp-13 (13.2.0-17ubuntu2) ...
273s Selecting previously unselected package cpp-s390x-linux-gnu.
273s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
273s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
273s Selecting previously unselected package cpp.
273s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ...
273s Unpacking cpp (4:13.2.0-7ubuntu1) ...
273s Selecting previously unselected package libcc1-0:s390x.
273s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ...
273s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ...
273s Selecting previously unselected package libgomp1:s390x.
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273s Selecting previously unselected package libitm1:s390x.
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273s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ...
273s Selecting previously unselected package libatomic1:s390x.
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273s Selecting previously unselected package libasan8:s390x.
273s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ...
273s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ...
273s Selecting previously unselected package libubsan1:s390x.
273s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ...
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273s Selecting previously unselected package libgcc-13-dev:s390x.
273s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ...
273s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ...
274s Selecting previously unselected package gcc-13-s390x-linux-gnu.
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274s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
274s Selecting previously unselected package gcc-13.
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274s Selecting previously unselected package gcc-s390x-linux-gnu.
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274s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
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274s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ...
274s Unpacking gcc (4:13.2.0-7ubuntu1) ...
274s Selecting previously unselected package libstdc++-13-dev:s390x.
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274s Selecting previously unselected package g++-13-s390x-linux-gnu.
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274s Selecting previously unselected package g++-13.
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274s Selecting previously unselected package g++-s390x-linux-gnu.
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274s Selecting previously unselected package g++.
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274s Unpacking g++ (4:13.2.0-7ubuntu1) ...
274s Selecting previously unselected package build-essential.
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274s Selecting previously unselected package dctrl-tools.
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275s Selecting previously unselected package libfreetype6:s390x.
275s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ...
275s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ...
275s Selecting previously unselected package fonts-dejavu-mono.
275s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ...
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275s Selecting previously unselected package fonts-dejavu-core.
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275s Selecting previously unselected package fontconfig-config.
275s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ...
275s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
275s Selecting previously unselected package libfontconfig1:s390x.
275s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ...
275s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ...
275s Selecting previously unselected package fontconfig.
275s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ...
275s Unpacking fontconfig (2.15.0-1ubuntu1) ...
275s Selecting previously unselected package libgfortran5:s390x.
275s Preparing to unpack .../038-libgfortran5_14-20240303-1ubuntu1_s390x.deb ...
275s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ...
275s Selecting previously unselected package libgfortran-13-dev:s390x.
275s Preparing to unpack .../039-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ...
275s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ...
275s Selecting previously unselected package gfortran-13-s390x-linux-gnu.
275s Preparing to unpack .../040-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ...
275s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
275s Selecting previously unselected package gfortran-13.
275s Preparing to unpack .../041-gfortran-13_13.2.0-17ubuntu2_s390x.deb ...
275s Unpacking gfortran-13 (13.2.0-17ubuntu2) ...
275s Selecting previously unselected package gfortran-s390x-linux-gnu.
275s Preparing to unpack .../042-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ...
275s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
275s Selecting previously unselected package gfortran.
275s Preparing to unpack .../043-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ...
275s Unpacking gfortran (4:13.2.0-7ubuntu1) ...
275s Selecting previously unselected package icu-devtools.
275s Preparing to unpack .../044-icu-devtools_74.2-1ubuntu1_s390x.deb ...
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275s Selecting previously unselected package libblas3:s390x.
275s Preparing to unpack .../045-libblas3_3.12.0-3_s390x.deb ...
275s Unpacking libblas3:s390x (3.12.0-3) ...
275s Selecting previously unselected package libblas-dev:s390x.
275s Preparing to unpack .../046-libblas-dev_3.12.0-3_s390x.deb ...
275s Unpacking libblas-dev:s390x (3.12.0-3) ...
275s Selecting previously unselected package libbz2-dev:s390x.
275s Preparing to unpack .../047-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ...
275s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ...
275s Selecting previously unselected package libpixman-1-0:s390x.
275s Preparing to unpack .../048-libpixman-1-0_0.42.2-1_s390x.deb ...
275s Unpacking libpixman-1-0:s390x (0.42.2-1) ...
275s Selecting previously unselected package libxcb-render0:s390x.
275s Preparing to unpack .../049-libxcb-render0_1.15-1_s390x.deb ...
275s Unpacking libxcb-render0:s390x (1.15-1) ...
275s Selecting previously unselected package libxcb-shm0:s390x.
275s Preparing to unpack .../050-libxcb-shm0_1.15-1_s390x.deb ...
275s Unpacking libxcb-shm0:s390x (1.15-1) ...
275s Selecting previously unselected package libxrender1:s390x.
275s Preparing to unpack .../051-libxrender1_1%3a0.9.10-1.1_s390x.deb ...
275s Unpacking libxrender1:s390x (1:0.9.10-1.1) ...
275s Selecting previously unselected package libcairo2:s390x.
275s Preparing to unpack .../052-libcairo2_1.18.0-1_s390x.deb ...
275s Unpacking libcairo2:s390x (1.18.0-1) ...
275s Selecting previously unselected package libdatrie1:s390x.
275s Preparing to unpack .../053-libdatrie1_0.2.13-3_s390x.deb ...
275s Unpacking libdatrie1:s390x (0.2.13-3) ...
275s Selecting previously unselected package libdeflate0:s390x.
275s Preparing to unpack .../054-libdeflate0_1.19-1_s390x.deb ...
275s Unpacking libdeflate0:s390x (1.19-1) ...
275s Selecting previously unselected package libgraphite2-3:s390x.
275s Preparing to unpack .../055-libgraphite2-3_1.3.14-2_s390x.deb ...
275s Unpacking libgraphite2-3:s390x (1.3.14-2) ...
275s Selecting previously unselected package libharfbuzz0b:s390x.
275s Preparing to unpack .../056-libharfbuzz0b_8.3.0-2_s390x.deb ...
275s Unpacking libharfbuzz0b:s390x (8.3.0-2) ...
275s Selecting previously unselected package x11-common.
275s Preparing to unpack .../057-x11-common_1%3a7.7+23ubuntu2_all.deb ...
275s Unpacking x11-common (1:7.7+23ubuntu2) ...
275s Selecting previously unselected package libice6:s390x.
275s Preparing to unpack .../058-libice6_2%3a1.0.10-1build2_s390x.deb ...
275s Unpacking libice6:s390x (2:1.0.10-1build2) ...
275s Selecting previously unselected package libicu-dev:s390x.
275s Preparing to unpack .../059-libicu-dev_74.2-1ubuntu1_s390x.deb ...
275s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ...
276s Selecting previously unselected package libjpeg-turbo8:s390x.
276s Preparing to unpack .../060-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ...
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276s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
276s Preparing to unpack .../061-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ...
276s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ...
276s Selecting previously unselected package libjpeg8:s390x.
276s Preparing to unpack .../062-libjpeg8_8c-2ubuntu11_s390x.deb ...
276s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
276s Selecting previously unselected package libjpeg8-dev:s390x.
276s Preparing to unpack .../063-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
276s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
276s Selecting previously unselected package libjpeg-dev:s390x.
276s Preparing to unpack .../064-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
276s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
276s Selecting previously unselected package liblapack3:s390x.
276s Preparing to unpack .../065-liblapack3_3.12.0-3_s390x.deb ...
276s Unpacking liblapack3:s390x (3.12.0-3) ...
276s Selecting previously unselected package liblapack-dev:s390x.
276s Preparing to unpack .../066-liblapack-dev_3.12.0-3_s390x.deb ...
276s Unpacking liblapack-dev:s390x (3.12.0-3) ...
276s Selecting previously unselected package libncurses-dev:s390x.
276s Preparing to unpack .../067-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ...
276s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ...
276s Selecting previously unselected package libthai-data.
276s Preparing to unpack .../068-libthai-data_0.1.29-2_all.deb ...
276s Unpacking libthai-data (0.1.29-2) ...
276s Selecting previously unselected package libthai0:s390x.
276s Preparing to unpack .../069-libthai0_0.1.29-2_s390x.deb ...
276s Unpacking libthai0:s390x (0.1.29-2) ...
276s Selecting previously unselected package libpango-1.0-0:s390x.
276s Preparing to unpack .../070-libpango-1.0-0_1.51.0+ds-4_s390x.deb ...
276s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ...
276s Selecting previously unselected package libpangoft2-1.0-0:s390x.
276s Preparing to unpack .../071-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ...
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276s Selecting previously unselected package libpangocairo-1.0-0:s390x.
276s Preparing to unpack .../072-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ...
276s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ...
276s Selecting previously unselected package libpaper1:s390x.
276s Preparing to unpack .../073-libpaper1_1.1.29_s390x.deb ...
276s Unpacking libpaper1:s390x (1.1.29) ...
276s Selecting previously unselected package libpaper-utils.
276s Preparing to unpack .../074-libpaper-utils_1.1.29_s390x.deb ...
276s Unpacking libpaper-utils (1.1.29) ...
276s Selecting previously unselected package libpcre2-16-0:s390x.
276s Preparing to unpack .../075-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ...
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276s Selecting previously unselected package libpcre2-32-0:s390x.
276s Preparing to unpack .../076-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ...
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276s Selecting previously unselected package libpcre2-posix3:s390x.
276s Preparing to unpack .../077-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ...
276s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ...
276s Selecting previously unselected package libpcre2-dev:s390x.
276s Preparing to unpack .../078-libpcre2-dev_10.42-4ubuntu1_s390x.deb ...
276s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ...
276s Selecting previously unselected package libpkgconf3:s390x.
276s Preparing to unpack .../079-libpkgconf3_1.8.1-2_s390x.deb ...
276s Unpacking libpkgconf3:s390x (1.8.1-2) ...
276s Selecting previously unselected package zlib1g-dev:s390x.
276s Preparing to unpack .../080-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ...
276s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ...
276s Selecting previously unselected package libpng-dev:s390x.
276s Preparing to unpack .../081-libpng-dev_1.6.43-1_s390x.deb ...
276s Unpacking libpng-dev:s390x (1.6.43-1) ...
276s Selecting previously unselected package libreadline-dev:s390x.
276s Preparing to unpack .../082-libreadline-dev_8.2-3_s390x.deb ...
276s Unpacking libreadline-dev:s390x (8.2-3) ...
276s Selecting previously unselected package libsharpyuv0:s390x.
276s Preparing to unpack .../083-libsharpyuv0_1.3.2-0.4_s390x.deb ...
276s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ...
276s Selecting previously unselected package libsm6:s390x.
276s Preparing to unpack .../084-libsm6_2%3a1.2.3-1build2_s390x.deb ...
276s Unpacking libsm6:s390x (2:1.2.3-1build2) ...
276s Selecting previously unselected package libtcl8.6:s390x.
276s Preparing to unpack .../085-libtcl8.6_8.6.13+dfsg-2_s390x.deb ...
276s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ...
276s Selecting previously unselected package libjbig0:s390x.
277s Preparing to unpack .../086-libjbig0_2.1-6.1ubuntu1_s390x.deb ...
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277s Selecting previously unselected package libwebp7:s390x.
277s Preparing to unpack .../087-libwebp7_1.3.2-0.4_s390x.deb ...
277s Unpacking libwebp7:s390x (1.3.2-0.4) ...
277s Selecting previously unselected package libtiff6:s390x.
277s Preparing to unpack .../088-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ...
277s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ...
277s Selecting previously unselected package libxft2:s390x.
277s Preparing to unpack .../089-libxft2_2.3.6-1_s390x.deb ...
277s Unpacking libxft2:s390x (2.3.6-1) ...
277s Selecting previously unselected package libxss1:s390x.
277s Preparing to unpack .../090-libxss1_1%3a1.2.3-1build2_s390x.deb ...
277s Unpacking libxss1:s390x (1:1.2.3-1build2) ...
277s Selecting previously unselected package libtk8.6:s390x.
277s Preparing to unpack .../091-libtk8.6_8.6.13-2_s390x.deb ...
277s Unpacking libtk8.6:s390x (8.6.13-2) ...
277s Selecting previously unselected package libxt6:s390x.
277s Preparing to unpack .../092-libxt6_1%3a1.2.1-1.1_s390x.deb ...
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277s Selecting previously unselected package zip.
277s Preparing to unpack .../093-zip_3.0-13_s390x.deb ...
277s Unpacking zip (3.0-13) ...
277s Selecting previously unselected package unzip.
277s Preparing to unpack .../094-unzip_6.0-28ubuntu3_s390x.deb ...
277s Unpacking unzip (6.0-28ubuntu3) ...
277s Selecting previously unselected package xdg-utils.
277s Preparing to unpack .../095-xdg-utils_1.1.3-4.1ubuntu3_all.deb ...
277s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ...
277s Selecting previously unselected package r-base-core.
277s Preparing to unpack .../096-r-base-core_4.3.2-1build1_s390x.deb ...
277s Unpacking r-base-core (4.3.2-1build1) ...
277s Selecting previously unselected package r-cran-littler.
277s Preparing to unpack .../097-r-cran-littler_0.3.19-1_s390x.deb ...
277s Unpacking r-cran-littler (0.3.19-1) ...
277s Selecting previously unselected package littler.
277s Preparing to unpack .../098-littler_0.3.19-1_all.deb ...
277s Unpacking littler (0.3.19-1) ...
277s Selecting previously unselected package pkgconf-bin.
277s Preparing to unpack .../099-pkgconf-bin_1.8.1-2_s390x.deb ...
277s Unpacking pkgconf-bin (1.8.1-2) ...
277s Selecting previously unselected package pkgconf:s390x.
277s Preparing to unpack .../100-pkgconf_1.8.1-2_s390x.deb ...
277s Unpacking pkgconf:s390x (1.8.1-2) ...
277s Selecting previously unselected package pkg-config:s390x.
277s Preparing to unpack .../101-pkg-config_1.8.1-2_s390x.deb ...
277s Unpacking pkg-config:s390x (1.8.1-2) ...
277s Selecting previously unselected package liblzma-dev:s390x.
277s Preparing to unpack .../102-liblzma-dev_5.4.5-0.3_s390x.deb ...
277s Unpacking liblzma-dev:s390x (5.4.5-0.3) ...
277s Selecting previously unselected package r-base-dev.
277s Preparing to unpack .../103-r-base-dev_4.3.2-1build1_all.deb ...
277s Unpacking r-base-dev (4.3.2-1build1) ...
277s Selecting previously unselected package pkg-r-autopkgtest.
277s Preparing to unpack .../104-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
277s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
277s Selecting previously unselected package r-bioc-biocgenerics.
277s Preparing to unpack .../105-r-bioc-biocgenerics_0.48.1-2_all.deb ...
277s Unpacking r-bioc-biocgenerics (0.48.1-2) ...
277s Selecting previously unselected package r-cran-png.
277s Preparing to unpack .../106-r-cran-png_0.1-8-1_s390x.deb ...
277s Unpacking r-cran-png (0.1-8-1) ...
277s Selecting previously unselected package r-cran-proto.
277s Preparing to unpack .../107-r-cran-proto_1.0.0-3build1_all.deb ...
277s Unpacking r-cran-proto (1.0.0-3build1) ...
277s Selecting previously unselected package r-cran-gsubfn.
277s Preparing to unpack .../108-r-cran-gsubfn_0.7-2_all.deb ...
277s Unpacking r-cran-gsubfn (0.7-2) ...
277s Selecting previously unselected package r-cran-bit.
277s Preparing to unpack .../109-r-cran-bit_4.0.5-1_s390x.deb ...
277s Unpacking r-cran-bit (4.0.5-1) ...
277s Selecting previously unselected package r-cran-bit64.
277s Preparing to unpack .../110-r-cran-bit64_4.0.5-1_s390x.deb ...
277s Unpacking r-cran-bit64 (4.0.5-1) ...
277s Selecting previously unselected package r-cran-rlang.
277s Preparing to unpack .../111-r-cran-rlang_1.1.3-1_s390x.deb ...
277s Unpacking r-cran-rlang (1.1.3-1) ...
277s Selecting previously unselected package r-cran-cli.
277s Preparing to unpack .../112-r-cran-cli_3.6.2-1_s390x.deb ...
277s Unpacking r-cran-cli (3.6.2-1) ...
278s Selecting previously unselected package r-cran-glue.
278s Preparing to unpack .../113-r-cran-glue_1.7.0-1_s390x.deb ...
278s Unpacking r-cran-glue (1.7.0-1) ...
278s Selecting previously unselected package r-cran-lifecycle.
278s Preparing to unpack .../114-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
278s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
278s Selecting previously unselected package r-cran-vctrs.
278s Preparing to unpack .../115-r-cran-vctrs_0.6.5-1_s390x.deb ...
278s Unpacking r-cran-vctrs (0.6.5-1) ...
278s Selecting previously unselected package r-cran-blob.
278s Preparing to unpack .../116-r-cran-blob_1.2.4-1_all.deb ...
278s Unpacking r-cran-blob (1.2.4-1) ...
278s Selecting previously unselected package r-cran-dbi.
278s Preparing to unpack .../117-r-cran-dbi_1.2.2-1_all.deb ...
278s Unpacking r-cran-dbi (1.2.2-1) ...
278s Selecting previously unselected package r-cran-fastmap.
278s Preparing to unpack .../118-r-cran-fastmap_1.1.1-1_s390x.deb ...
278s Unpacking r-cran-fastmap (1.1.1-1) ...
278s Selecting previously unselected package r-cran-cachem.
278s Preparing to unpack .../119-r-cran-cachem_1.0.8-1_s390x.deb ...
278s Unpacking r-cran-cachem (1.0.8-1) ...
278s Selecting previously unselected package r-cran-memoise.
278s Preparing to unpack .../120-r-cran-memoise_2.0.1-1_all.deb ...
278s Unpacking r-cran-memoise (2.0.1-1) ...
278s Selecting previously unselected package r-cran-pkgconfig.
278s Preparing to unpack .../121-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
278s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
278s Selecting previously unselected package r-cran-plogr.
278s Preparing to unpack .../122-r-cran-plogr_0.2.0-3build1_all.deb ...
278s Unpacking r-cran-plogr (0.2.0-3build1) ...
278s Selecting previously unselected package r-cran-cpp11.
278s Preparing to unpack .../123-r-cran-cpp11_0.4.7-1_all.deb ...
278s Unpacking r-cran-cpp11 (0.4.7-1) ...
278s Selecting previously unselected package r-cran-rsqlite.
278s Preparing to unpack .../124-r-cran-rsqlite_2.3.4-1_s390x.deb ...
278s Unpacking r-cran-rsqlite (2.3.4-1) ...
278s Selecting previously unselected package r-cran-chron.
278s Preparing to unpack .../125-r-cran-chron_2.3-61-2_s390x.deb ...
278s Unpacking r-cran-chron (2.3-61-2) ...
278s Selecting previously unselected package r-cran-sqldf.
278s Preparing to unpack .../126-r-cran-sqldf_0.4-11-2_all.deb ...
278s Unpacking r-cran-sqldf (0.4-11-2) ...
278s Selecting previously unselected package r-cran-pkgkitten.
278s Preparing to unpack .../127-r-cran-pkgkitten_0.2.3-1_all.deb ...
278s Unpacking r-cran-pkgkitten (0.2.3-1) ...
278s Selecting previously unselected package r-cran-rcpp.
278s Preparing to unpack .../128-r-cran-rcpp_1.0.12-1_s390x.deb ...
278s Unpacking r-cran-rcpp (1.0.12-1) ...
278s Selecting previously unselected package r-cran-plyr.
278s Preparing to unpack .../129-r-cran-plyr_1.8.9-1_s390x.deb ...
278s Unpacking r-cran-plyr (1.8.9-1) ...
278s Selecting previously unselected package r-cran-magrittr.
278s Preparing to unpack .../130-r-cran-magrittr_2.0.3-1_s390x.deb ...
278s Unpacking r-cran-magrittr (2.0.3-1) ...
278s Selecting previously unselected package r-cran-lattice.
278s Preparing to unpack .../131-r-cran-lattice_0.22-5-1_s390x.deb ...
278s Unpacking r-cran-lattice (0.22-5-1) ...
278s Selecting previously unselected package r-cran-matrix.
278s Preparing to unpack .../132-r-cran-matrix_1.6-5-1_s390x.deb ...
278s Unpacking r-cran-matrix (1.6-5-1) ...
278s Selecting previously unselected package r-cran-igraph.
278s Preparing to unpack .../133-r-cran-igraph_1.6.0-1_s390x.deb ...
278s Unpacking r-cran-igraph (1.6.0-1) ...
278s Selecting previously unselected package r-cran-bitops.
278s Preparing to unpack .../134-r-cran-bitops_1.0-7-1_s390x.deb ...
278s Unpacking r-cran-bitops (1.0-7-1) ...
278s Selecting previously unselected package r-cran-rcurl.
278s Preparing to unpack .../135-r-cran-rcurl_1.98-1.14+dfsg-1build1_s390x.deb ...
278s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ...
278s Selecting previously unselected package r-cran-rcolorbrewer.
278s Preparing to unpack .../136-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
278s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
278s Selecting previously unselected package r-cran-gtools.
278s Preparing to unpack .../137-r-cran-gtools_3.9.5-1_s390x.deb ...
278s Unpacking r-cran-gtools (3.9.5-1) ...
278s Selecting previously unselected package r-cran-catools.
278s Preparing to unpack .../138-r-cran-catools_1.18.2-1_s390x.deb ...
278s Unpacking r-cran-catools (1.18.2-1) ...
278s Selecting previously unselected package r-cran-mass.
278s Preparing to unpack .../139-r-cran-mass_7.3-60.0.1-1_s390x.deb ...
278s Unpacking r-cran-mass (7.3-60.0.1-1) ...
278s Selecting previously unselected package r-cran-kernsmooth.
278s Preparing to unpack .../140-r-cran-kernsmooth_2.23-22-1_s390x.deb ...
278s Unpacking r-cran-kernsmooth (2.23-22-1) ...
278s Selecting previously unselected package r-cran-gdata.
278s Preparing to unpack .../141-r-cran-gdata_3.0.0-1_all.deb ...
278s Unpacking r-cran-gdata (3.0.0-1) ...
278s Selecting previously unselected package r-cran-gplots.
278s Preparing to unpack .../142-r-cran-gplots_3.1.3.1-1_all.deb ...
278s Unpacking r-cran-gplots (3.1.3.1-1) ...
278s Selecting previously unselected package r-cran-hash.
278s Preparing to unpack .../143-r-cran-hash_2.2.6.3-1_all.deb ...
278s Unpacking r-cran-hash (2.2.6.3-1) ...
278s Selecting previously unselected package r-cran-plotrix.
278s Preparing to unpack .../144-r-cran-plotrix_3.8-4-1_all.deb ...
278s Unpacking r-cran-plotrix (3.8-4-1) ...
278s Selecting previously unselected package r-bioc-stringdb.
278s Preparing to unpack .../145-r-bioc-stringdb_2.14.0-1_all.deb ...
278s Unpacking r-bioc-stringdb (2.14.0-1) ...
278s Selecting previously unselected package r-cran-runit.
278s Preparing to unpack .../146-r-cran-runit_0.4.32-3_all.deb ...
278s Unpacking r-cran-runit (0.4.32-3) ...
278s Selecting previously unselected package autopkgtest-satdep.
279s Preparing to unpack .../147-1-autopkgtest-satdep.deb ...
279s Unpacking autopkgtest-satdep (0) ...
279s Setting up libgraphite2-3:s390x (1.3.14-2) ...
279s Setting up libpixman-1-0:s390x (0.42.2-1) ...
279s Setting up libsharpyuv0:s390x (1.3.2-0.4) ...
279s Setting up libpaper1:s390x (1.1.29) ...
279s 
279s Creating config file /etc/papersize with new version
279s Setting up libxrender1:s390x (1:0.9.10-1.1) ...
279s Setting up libdatrie1:s390x (0.2.13-3) ...
279s Setting up libxcb-render0:s390x (1.15-1) ...
279s Setting up unzip (6.0-28ubuntu3) ...
279s Setting up x11-common (1:7.7+23ubuntu2) ...
279s Setting up libpsl5t64:s390x (0.21.2-1.1) ...
279s Setting up libdeflate0:s390x (1.19-1) ...
279s Setting up linux-libc-dev:s390x (6.8.0-11.11) ...
279s Setting up libxcb-shm0:s390x (1.15-1) ...
279s Setting up libpaper-utils (1.1.29) ...
279s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ...
279s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ...
279s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ...
279s Setting up zip (3.0-13) ...
279s Setting up libpcre2-32-0:s390x (10.42-4ubuntu1) ...
279s Setting up libblas3:s390x (3.12.0-3) ...
279s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
279s Setting up libtirpc-dev:s390x (1.3.4+ds-1build1) ...
279s Setting up libpkgconf3:s390x (1.8.1-2) ...
279s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
279s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ...
279s Setting up fonts-dejavu-mono (2.37-8) ...
279s Setting up libmpc3:s390x (1.3.1-1) ...
279s Setting up libatomic1:s390x (14-20240303-1ubuntu1) ...
279s Setting up libtcl8.6:s390x (8.6.13+dfsg-2) ...
279s Setting up icu-devtools (74.2-1ubuntu1) ...
279s Setting up fonts-dejavu-core (2.37-8) ...
279s Setting up pkgconf-bin (1.8.1-2) ...
279s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ...
279s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ...
279s Setting up libwebp7:s390x (1.3.2-0.4) ...
279s Setting up liblzma-dev:s390x (5.4.5-0.3) ...
279s Setting up libubsan1:s390x (14-20240303-1ubuntu1) ...
279s Setting up libpcre2-posix3:s390x (10.42-4ubuntu1) ...
279s Setting up libnsl-dev:s390x (1.3.0-3) ...
279s Setting up libcrypt-dev:s390x (1:4.4.36-4) ...
279s Setting up libasan8:s390x (14-20240303-1ubuntu1) ...
279s Setting up libharfbuzz0b:s390x (8.3.0-2) ...
279s Setting up libthai-data (0.1.29-2) ...
279s Setting up libxss1:s390x (1:1.2.3-1build2) ...
279s Setting up libisl23:s390x (0.26-3) ...
279s Setting up libc-dev-bin (2.39-0ubuntu2) ...
279s Setting up xdg-utils (1.1.3-4.1ubuntu3) ...
279s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
279s Setting up libcc1-0:s390x (14-20240303-1ubuntu1) ...
279s Setting up libblas-dev:s390x (3.12.0-3) ...
279s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
279s Setting up dctrl-tools (2.24-3build2) ...
279s Setting up libitm1:s390x (14-20240303-1ubuntu1) ...
279s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
279s Setting up libice6:s390x (2:1.0.10-1build2) ...
279s Setting up liblapack3:s390x (3.12.0-3) ...
279s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
279s Setting up libcurl4t64:s390x (8.5.0-2ubuntu7) ...
279s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
279s Setting up pkgconf:s390x (1.8.1-2) ...
279s Setting up libthai0:s390x (0.1.29-2) ...
279s Setting up cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
279s Setting up liblapack-dev:s390x (3.12.0-3) ...
279s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
279s Setting up pkg-config:s390x (1.8.1-2) ...
279s Setting up libgcc-13-dev:s390x (13.2.0-17ubuntu2) ...
279s Setting up libtiff6:s390x (4.5.1+git230720-3ubuntu1) ...
279s Setting up libc6-dev:s390x (2.39-0ubuntu2) ...
279s Setting up curl (8.5.0-2ubuntu7) ...
279s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ...
279s Setting up libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ...
279s Setting up libsm6:s390x (2:1.2.3-1build2) ...
279s Setting up libicu-dev:s390x (74.2-1ubuntu1) ...
279s Setting up libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ...
279s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ...
279s Setting up fontconfig (2.15.0-1ubuntu1) ...
281s Regenerating fonts cache... done.
281s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ...
281s Setting up libxft2:s390x (2.3.6-1) ...
281s Setting up libncurses-dev:s390x (6.4+20240113-1ubuntu1) ...
281s Setting up libpcre2-dev:s390x (10.42-4ubuntu1) ...
281s Setting up cpp-13 (13.2.0-17ubuntu2) ...
281s Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
281s Setting up libtk8.6:s390x (8.6.13-2) ...
281s Setting up libpango-1.0-0:s390x (1.51.0+ds-4) ...
281s Setting up libreadline-dev:s390x (8.2-3) ...
281s Setting up libcairo2:s390x (1.18.0-1) ...
281s Setting up gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
281s Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
281s Setting up g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
281s Setting up gcc-13 (13.2.0-17ubuntu2) ...
281s Setting up libxt6:s390x (1:1.2.1-1.1) ...
281s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ...
281s Setting up cpp (4:13.2.0-7ubuntu1) ...
281s Setting up gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ...
281s Setting up libpangoft2-1.0-0:s390x (1.51.0+ds-4) ...
281s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
281s Setting up libpangocairo-1.0-0:s390x (1.51.0+ds-4) ...
281s Setting up g++-13 (13.2.0-17ubuntu2) ...
281s Setting up gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
281s Setting up libpng-dev:s390x (1.6.43-1) ...
281s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
281s Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ...
281s Setting up gcc (4:13.2.0-7ubuntu1) ...
281s Setting up gfortran-13 (13.2.0-17ubuntu2) ...
281s Setting up r-base-core (4.3.2-1build1) ...
281s 
281s Creating config file /etc/R/Renviron with new version
281s Setting up r-cran-lattice (0.22-5-1) ...
281s Setting up r-cran-proto (1.0.0-3build1) ...
281s Setting up g++ (4:13.2.0-7ubuntu1) ...
281s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
281s Setting up build-essential (12.10ubuntu1) ...
281s Setting up r-cran-pkgkitten (0.2.3-1) ...
281s Setting up r-cran-hash (2.2.6.3-1) ...
281s Setting up r-cran-chron (2.3-61-2) ...
281s Setting up r-cran-magrittr (2.0.3-1) ...
281s Setting up r-cran-littler (0.3.19-1) ...
281s Setting up r-cran-rcpp (1.0.12-1) ...
281s Setting up r-bioc-biocgenerics (0.48.1-2) ...
281s Setting up r-cran-rlang (1.1.3-1) ...
281s Setting up littler (0.3.19-1) ...
281s Setting up r-cran-plogr (0.2.0-3build1) ...
281s Setting up r-cran-dbi (1.2.2-1) ...
281s Setting up r-cran-mass (7.3-60.0.1-1) ...
281s Setting up r-cran-gtools (3.9.5-1) ...
281s Setting up r-cran-glue (1.7.0-1) ...
281s Setting up r-cran-bit (4.0.5-1) ...
281s Setting up r-cran-cli (3.6.2-1) ...
282s Setting up gfortran (4:13.2.0-7ubuntu1) ...
282s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
282s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
282s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
282s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
282s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
282s Setting up r-cran-bitops (1.0-7-1) ...
282s Setting up r-cran-bit64 (4.0.5-1) ...
282s Setting up r-cran-fastmap (1.1.1-1) ...
282s Setting up r-cran-png (0.1-8-1) ...
282s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
282s Setting up r-cran-gsubfn (0.7-2) ...
282s Setting up r-cran-plotrix (3.8-4-1) ...
282s Setting up r-cran-cpp11 (0.4.7-1) ...
282s Setting up r-cran-plyr (1.8.9-1) ...
282s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
282s Setting up r-cran-runit (0.4.32-3) ...
282s Setting up r-cran-matrix (1.6-5-1) ...
282s Setting up r-cran-kernsmooth (2.23-22-1) ...
282s Setting up r-cran-cachem (1.0.8-1) ...
282s Setting up r-cran-catools (1.18.2-1) ...
282s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build1) ...
282s Setting up r-cran-gdata (3.0.0-1) ...
282s Setting up r-cran-vctrs (0.6.5-1) ...
282s Setting up r-base-dev (4.3.2-1build1) ...
282s Setting up r-cran-igraph (1.6.0-1) ...
282s Setting up r-cran-memoise (2.0.1-1) ...
282s Setting up r-cran-blob (1.2.4-1) ...
282s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
282s Setting up r-cran-gplots (3.1.3.1-1) ...
282s Setting up r-cran-rsqlite (2.3.4-1) ...
282s Setting up r-cran-sqldf (0.4-11-2) ...
282s Setting up r-bioc-stringdb (2.14.0-1) ...
282s Setting up autopkgtest-satdep (0) ...
282s Processing triggers for man-db (2.12.0-3) ...
282s Processing triggers for install-info (7.1-3) ...
282s Processing triggers for libc-bin (2.39-0ubuntu2) ...
287s (Reading database ... 61405 files and directories currently installed.)
287s Removing autopkgtest-satdep (0) ...
287s autopkgtest [19:30:53]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
287s autopkgtest [19:30:53]: test pkg-r-autopkgtest: [-----------------------
287s Test: Try to load the R library STRINGdb
287s 
287s R version 4.3.2 (2023-10-31) -- "Eye Holes"
287s Copyright (C) 2023 The R Foundation for Statistical Computing
287s Platform: s390x-ibm-linux-gnu (64-bit)
287s 
287s R is free software and comes with ABSOLUTELY NO WARRANTY.
287s You are welcome to redistribute it under certain conditions.
287s Type 'license()' or 'licence()' for distribution details.
287s 
287s R is a collaborative project with many contributors.
287s Type 'contributors()' for more information and
287s 'citation()' on how to cite R or R packages in publications.
287s 
287s Type 'demo()' for some demos, 'help()' for on-line help, or
287s 'help.start()' for an HTML browser interface to help.
287s Type 'q()' to quit R.
287s 
288s > library('STRINGdb')
288s > 
288s > 
288s Other tests are currently unsupported!
288s They will be progressively added.
289s autopkgtest [19:30:55]: test pkg-r-autopkgtest: -----------------------]
289s pkg-r-autopkgtest    PASS
289s autopkgtest [19:30:55]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
289s autopkgtest [19:30:55]: @@@@@@@@@@@@@@@@@@@@ summary
289s pkg-r-autopkgtest    PASS
321s Creating nova instance adt-noble-s390x-r-bioc-stringdb-20240316-192606-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...