0s autopkgtest [18:22:14]: starting date and time: 2024-03-16 18:22:14+0000 0s autopkgtest [18:22:14]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:22:14]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ras8qmgs/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rhtslib,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-shortread --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rhtslib/2.4.1+dfsg-3build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-9.secgroup --name adt-noble-s390x-r-bioc-shortread-20240316-182214-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 91s autopkgtest [18:23:45]: testbed dpkg architecture: s390x 91s autopkgtest [18:23:45]: testbed apt version: 2.7.12 91s autopkgtest [18:23:45]: @@@@@@@@@@@@@@@@@@@@ test bed setup 92s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 93s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 93s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 93s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 93s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 93s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 93s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 93s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 93s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 93s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 93s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 93s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 93s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 95s Fetched 8760 kB in 2s (3563 kB/s) 96s Reading package lists... 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s Calculating upgrade... 99s The following packages will be REMOVED: 99s libssl3 99s The following NEW packages will be installed: 99s libssl3t64 99s The following packages have been kept back: 99s curl 99s The following packages will be upgraded: 99s openssl ubuntu-minimal ubuntu-standard 99s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 99s Need to get 2680 kB of archives. 99s After this operation, 23.6 kB of additional disk space will be used. 99s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 99s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 99s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 99s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 100s Fetched 2680 kB in 1s (3877 kB/s) 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 100s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 100s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 100s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 100s wget depends on libssl3 (>= 3.0.0). 100s tnftp depends on libssl3 (>= 3.0.0). 100s tcpdump depends on libssl3 (>= 3.0.0). 100s systemd-resolved depends on libssl3 (>= 3.0.0). 100s systemd depends on libssl3 (>= 3.0.0). 100s sudo depends on libssl3 (>= 3.0.0). 100s s390-tools depends on libssl3 (>= 3.0.0). 100s rsync depends on libssl3 (>= 3.0.0). 100s python3-cryptography depends on libssl3 (>= 3.0.0). 100s openssh-server depends on libssl3 (>= 3.0.10). 100s openssh-client depends on libssl3 (>= 3.0.10). 100s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 100s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 100s libssh-4:s390x depends on libssl3 (>= 3.0.0). 100s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 100s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 100s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 100s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 100s libnvme1 depends on libssl3 (>= 3.0.0). 100s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 100s libkmod2:s390x depends on libssl3 (>= 3.0.0). 100s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 100s libcurl4:s390x depends on libssl3 (>= 3.0.0). 100s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 100s kmod depends on libssl3 (>= 3.0.0). 100s dhcpcd-base depends on libssl3 (>= 3.0.0). 100s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 100s 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 100s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 100s Selecting previously unselected package libssl3t64:s390x. 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 100s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 100s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 100s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 100s Unpacking ubuntu-minimal (1.536) over (1.535) ... 100s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 100s Unpacking ubuntu-standard (1.536) over (1.535) ... 100s Setting up ubuntu-minimal (1.536) ... 100s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 100s Setting up ubuntu-standard (1.536) ... 100s Setting up openssl (3.0.13-0ubuntu1) ... 100s Processing triggers for man-db (2.12.0-3) ... 100s Processing triggers for libc-bin (2.39-0ubuntu2) ... 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 101s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 101s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 102s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 102s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 103s Reading package lists... 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s Calculating upgrade... 103s The following packages have been kept back: 103s curl 103s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 103s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 106s autopkgtest [18:24:00]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 106s autopkgtest [18:24:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-shortread 108s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (dsc) [2387 B] 108s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (tar) [5223 kB] 108s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-shortread 1.60.0-2 (diff) [5876 B] 109s gpgv: Signature made Mon Dec 18 09:06:56 2023 UTC 109s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 109s gpgv: issuer "tille@debian.org" 109s gpgv: Can't check signature: No public key 109s dpkg-source: warning: cannot verify inline signature for ./r-bioc-shortread_1.60.0-2.dsc: no acceptable signature found 109s autopkgtest [18:24:03]: testing package r-bioc-shortread version 1.60.0-2 109s autopkgtest [18:24:03]: build not needed 111s autopkgtest [18:24:05]: test pkg-r-autopkgtest: preparing testbed 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s Starting pkgProblemResolver with broken count: 0 112s Starting 2 pkgProblemResolver with broken count: 0 112s Done 113s The following additional packages will be installed: 113s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 113s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 113s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 113s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 113s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 113s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 113s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 113s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 113s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 113s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 113s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 113s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 113s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 113s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 113s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 113s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 113s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 113s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 113s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 113s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 113s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 113s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 113s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 113s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 113s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 113s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 113s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 113s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 113s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 113s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 113s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 113s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 113s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 113s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 113s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 113s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 113s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 113s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 113s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 113s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 113s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 113s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 113s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 113s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 113s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 113s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 113s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 113s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 113s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 113s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 113s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 113s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 113s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 113s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 113s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 113s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 113s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 113s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 113s Suggested packages: 113s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 113s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 113s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 113s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 113s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 113s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 113s libboost-context1.83-dev libboost-contract1.83-dev 113s libboost-coroutine1.83-dev libboost-date-time1.83-dev 113s libboost-exception1.83-dev libboost-fiber1.83-dev 113s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 113s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 113s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 113s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 113s libboost-numpy1.83-dev libboost-program-options1.83-dev 113s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 113s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 113s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 113s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 113s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 113s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 113s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 113s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 113s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 113s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 113s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 113s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 113s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-cran-testthat 113s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 113s r-cran-doparallel r-bioc-variantannotation r-cran-batchtools 113s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 113s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 113s r-cran-r.utils r-bioc-edger r-bioc-ensembldb r-bioc-annotationfilter 113s r-cran-markdown r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 113s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 113s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-polyclip r-cran-lubridate 113s r-cran-sp r-cran-ggplot2 r-cran-gridextra r-cran-scatterplot3d r-cran-getopt 113s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-scales 113s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 113s r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio r-cran-callr 113s r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper 113s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 113s texlive-latex-base-doc wp2latex 113s Recommended packages: 113s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 113s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 113s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 113s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 113s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 113s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 113s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 113s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 113s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 113s r-cran-cairo r-cran-markdown r-cran-ragg r-cran-readr r-cran-r.rsp r-cran-sf 113s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 113s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 113s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 113s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 113s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 113s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 113s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 113s The following packages will be REMOVED: 113s libcurl4 libpsl5 113s The following NEW packages will be installed: 113s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 113s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 113s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 113s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 113s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 113s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 113s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 113s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 113s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 113s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 113s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 113s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 113s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 113s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 113s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 113s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 113s libjs-popper.js libjs-prettify libjs-sifter.js 113s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 113s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 113s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 113s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 113s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 113s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 113s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 113s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 113s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 113s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 113s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 113s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 113s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 113s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 113s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 113s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 113s r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 113s r-bioc-s4arrays r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 113s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 113s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 113s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 113s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 113s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 113s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 113s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 113s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 113s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 113s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 113s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 113s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 113s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 113s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 113s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 113s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 113s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 113s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 113s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 113s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 113s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 113s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 113s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 113s The following packages will be upgraded: 113s curl 113s 1 upgraded, 284 newly installed, 2 to remove and 0 not upgraded. 113s Need to get 438 MB/438 MB of archives. 113s After this operation, 1409 MB of additional disk space will be used. 113s Get:1 /tmp/autopkgtest.aos8Fd/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [764 B] 113s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 113s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 113s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 113s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 113s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 113s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 113s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 113s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 113s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 114s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 114s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 114s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 114s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 114s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 114s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 114s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 114s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 114s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 114s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 114s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 114s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 114s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 114s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 115s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 115s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 115s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 115s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 115s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 115s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 115s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 115s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 115s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 115s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 115s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 115s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 115s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 115s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 115s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 115s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 115s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 115s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 115s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 115s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 115s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 115s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 115s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 115s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 115s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 115s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 115s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 115s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 115s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 115s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 115s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 115s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 116s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 116s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 116s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 116s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 116s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 116s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 116s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 116s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 116s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 116s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 116s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 116s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 116s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 116s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 116s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 116s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 117s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 117s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 117s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 117s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 117s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 117s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 117s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 117s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 117s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 117s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 117s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 117s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 117s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 117s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 117s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 117s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 117s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 117s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 117s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 117s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 117s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 117s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 117s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 117s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 117s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 117s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 117s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 117s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 117s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 117s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 117s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 117s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 117s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 117s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 117s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 117s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 118s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 118s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 118s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 118s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 118s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 118s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 118s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 118s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 118s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 118s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 118s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 118s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 118s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 118s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 118s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 118s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 118s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 118s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 118s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 118s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 118s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 118s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 118s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 118s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 118s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 118s Get:135 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 118s Get:136 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 118s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 119s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 119s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 119s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 119s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 119s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 119s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 119s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 121s Get:145 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 121s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 121s Get:147 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 121s Get:148 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 121s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 121s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 121s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 121s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 121s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 121s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 122s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 122s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 122s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 122s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 122s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 122s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 122s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 122s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 122s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 122s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 122s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 122s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 122s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 122s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 122s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 122s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 122s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 122s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 122s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 122s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 122s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 122s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 122s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 122s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 122s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 122s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 122s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 122s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 122s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1 [794 kB] 122s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 123s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 123s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 123s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 123s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 123s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 124s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 124s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 124s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 124s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 124s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 124s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 124s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 124s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 124s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 124s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 124s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 124s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 124s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 124s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 124s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 124s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 124s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 124s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 124s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 124s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 124s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 124s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 124s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 124s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 124s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 125s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 125s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 125s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 125s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 125s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 125s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 125s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 125s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 125s Get:223 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 125s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 125s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 125s Get:226 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 125s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 125s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 125s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 125s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 125s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 125s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 125s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 125s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 125s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 125s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 125s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 125s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 125s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 125s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 125s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 125s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 125s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 125s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 125s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 125s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 125s Get:247 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 125s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 125s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 126s Get:250 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 126s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 129s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 129s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 129s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 129s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 129s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 129s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 129s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 129s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 129s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 129s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 129s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 129s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 129s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 129s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 129s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 129s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 129s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 129s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-3build1 [1409 kB] 129s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 129s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 129s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 129s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 129s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 129s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 129s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hwriter all 1.3.2.1-1 [106 kB] 130s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jpeg s390x 0.1-10-1 [31.3 kB] 130s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 130s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-deldir s390x 2.0-4-1 [271 kB] 130s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcppeigen s390x 0.3.3.9.4-1 [1187 kB] 130s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-interp s390x 1.1-6-1 [1465 kB] 130s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 130s Get:283 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-latticeextra all 0.6-30-1 [2198 kB] 130s Get:284 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-shortread s390x 1.60.0-2 [5204 kB] 130s Get:285 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-runit all 0.4.32-3 [283 kB] 131s Preconfiguring packages ... 131s Fetched 438 MB in 17s (25.5 MB/s) 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 131s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 131s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 131s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 131s wget depends on libpsl5 (>= 0.16.0). 131s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 131s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 131s 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 131s Removing libpsl5:s390x (0.21.2-1build1) ... 131s Selecting previously unselected package libpsl5t64:s390x. 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 131s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 131s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 131s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 131s s390-tools depends on libcurl4 (>= 7.16.2). 131s 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 131s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 131s Selecting previously unselected package libcurl4t64:s390x. 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 131s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 131s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 131s Selecting previously unselected package libc-dev-bin. 131s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 131s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 131s Selecting previously unselected package linux-libc-dev:s390x. 131s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 131s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 131s Selecting previously unselected package libcrypt-dev:s390x. 131s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 131s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 131s Selecting previously unselected package libtirpc-dev:s390x. 131s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 131s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 131s Selecting previously unselected package libnsl-dev:s390x. 131s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 131s Unpacking libnsl-dev:s390x (1.3.0-3) ... 131s Selecting previously unselected package rpcsvc-proto. 131s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 131s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 131s Selecting previously unselected package libc6-dev:s390x. 131s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 131s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 132s Selecting previously unselected package libisl23:s390x. 132s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 132s Unpacking libisl23:s390x (0.26-3) ... 132s Selecting previously unselected package libmpc3:s390x. 132s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 132s Unpacking libmpc3:s390x (1.3.1-1) ... 132s Selecting previously unselected package cpp-13-s390x-linux-gnu. 132s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 132s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package cpp-13. 132s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 132s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package cpp-s390x-linux-gnu. 132s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 132s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package cpp. 132s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 132s Unpacking cpp (4:13.2.0-7ubuntu1) ... 132s Selecting previously unselected package libcc1-0:s390x. 132s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libgomp1:s390x. 132s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libitm1:s390x. 132s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libatomic1:s390x. 132s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libasan8:s390x. 132s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libubsan1:s390x. 132s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 132s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 132s Selecting previously unselected package libgcc-13-dev:s390x. 132s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 132s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 132s Selecting previously unselected package gcc-13-s390x-linux-gnu. 132s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 132s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package gcc-13. 133s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 133s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package gcc-s390x-linux-gnu. 133s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 133s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package gcc. 133s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 133s Unpacking gcc (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package libstdc++-13-dev:s390x. 133s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 133s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package g++-13-s390x-linux-gnu. 133s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 133s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package g++-13. 133s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 133s Unpacking g++-13 (13.2.0-17ubuntu2) ... 133s Selecting previously unselected package g++-s390x-linux-gnu. 133s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 133s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package g++. 133s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 133s Unpacking g++ (4:13.2.0-7ubuntu1) ... 133s Selecting previously unselected package build-essential. 133s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 133s Unpacking build-essential (12.10ubuntu1) ... 133s Selecting previously unselected package dctrl-tools. 133s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 133s Unpacking dctrl-tools (2.24-3build2) ... 133s Selecting previously unselected package libfreetype6:s390x. 133s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 133s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 133s Selecting previously unselected package fonts-dejavu-mono. 133s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 133s Unpacking fonts-dejavu-mono (2.37-8) ... 133s Selecting previously unselected package fonts-dejavu-core. 133s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 133s Unpacking fonts-dejavu-core (2.37-8) ... 133s Selecting previously unselected package fontconfig-config. 133s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 133s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package libfontconfig1:s390x. 133s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 133s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package fontconfig. 133s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 133s Unpacking fontconfig (2.15.0-1ubuntu1) ... 133s Selecting previously unselected package fonts-font-awesome. 133s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 133s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 133s Selecting previously unselected package fonts-glyphicons-halflings. 133s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 133s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 133s Selecting previously unselected package fonts-lmodern. 133s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 133s Unpacking fonts-lmodern (2.005-1) ... 134s Selecting previously unselected package fonts-mathjax. 134s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 134s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 134s Selecting previously unselected package libgfortran5:s390x. 134s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 134s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 134s Selecting previously unselected package libgfortran-13-dev:s390x. 134s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 134s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 134s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 134s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-13. 134s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 134s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 134s Selecting previously unselected package gfortran-s390x-linux-gnu. 134s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 134s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 134s Selecting previously unselected package gfortran. 134s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 134s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 134s Selecting previously unselected package icu-devtools. 134s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 134s Unpacking icu-devtools (74.2-1ubuntu1) ... 134s Selecting previously unselected package javascript-common. 134s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 134s Unpacking javascript-common (11+nmu1) ... 134s Selecting previously unselected package libio-string-perl. 134s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 134s Unpacking libio-string-perl (1.08-4) ... 134s Selecting previously unselected package liblatex-tounicode-perl. 134s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 134s Unpacking liblatex-tounicode-perl (0.54-2) ... 134s Selecting previously unselected package libbibtex-parser-perl. 134s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 134s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 134s Selecting previously unselected package libblas3:s390x. 134s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 134s Unpacking libblas3:s390x (3.12.0-3) ... 134s Selecting previously unselected package libblas-dev:s390x. 134s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 134s Unpacking libblas-dev:s390x (3.12.0-3) ... 134s Selecting previously unselected package libboost1.83-dev:s390x. 134s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 134s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 137s Selecting previously unselected package libboost-dev:s390x. 137s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 137s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 137s Selecting previously unselected package libbz2-dev:s390x. 137s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 137s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 137s Selecting previously unselected package libpixman-1-0:s390x. 137s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 137s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 137s Selecting previously unselected package libxcb-render0:s390x. 137s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 137s Unpacking libxcb-render0:s390x (1.15-1) ... 137s Selecting previously unselected package libxcb-shm0:s390x. 137s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 137s Unpacking libxcb-shm0:s390x (1.15-1) ... 137s Selecting previously unselected package libxrender1:s390x. 137s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 137s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 137s Selecting previously unselected package libcairo2:s390x. 137s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 137s Unpacking libcairo2:s390x (1.18.0-1) ... 137s Selecting previously unselected package libdatrie1:s390x. 137s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 137s Unpacking libdatrie1:s390x (0.2.13-3) ... 137s Selecting previously unselected package libdeflate0:s390x. 137s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 137s Unpacking libdeflate0:s390x (1.19-1) ... 137s Selecting previously unselected package libgraphite2-3:s390x. 137s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 137s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 137s Selecting previously unselected package libharfbuzz0b:s390x. 137s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 137s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 137s Selecting previously unselected package x11-common. 137s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 137s Unpacking x11-common (1:7.7+23ubuntu2) ... 137s Selecting previously unselected package libice6:s390x. 137s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 137s Unpacking libice6:s390x (2:1.0.10-1build2) ... 137s Selecting previously unselected package libicu-dev:s390x. 137s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 137s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 137s Selecting previously unselected package libjpeg-turbo8:s390x. 137s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 137s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 137s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 137s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 137s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 137s Selecting previously unselected package libjpeg8:s390x. 137s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 137s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 137s Selecting previously unselected package libjpeg8-dev:s390x. 137s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 137s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 137s Selecting previously unselected package libjpeg-dev:s390x. 137s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 137s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 137s Selecting previously unselected package libjs-bootstrap. 137s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 137s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 137s Selecting previously unselected package libjs-popper.js. 137s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 137s Unpacking libjs-popper.js (1.16.1+ds-6) ... 137s Selecting previously unselected package libjs-bootstrap4. 137s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 137s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 137s Selecting previously unselected package libjs-d3. 137s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 137s Unpacking libjs-d3 (3.5.17-4) ... 138s Selecting previously unselected package libjs-es5-shim. 138s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 138s Unpacking libjs-es5-shim (4.6.7-2) ... 138s Selecting previously unselected package libjs-highlight.js. 138s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 138s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 138s Selecting previously unselected package libjs-jquery. 138s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 138s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 138s Selecting previously unselected package libjs-jquery-datatables. 138s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 138s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 138s Selecting previously unselected package libjs-sifter.js. 138s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 138s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 138s Selecting previously unselected package libjs-microplugin.js. 138s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 138s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 138s Selecting previously unselected package libjs-jquery-selectize.js. 138s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 138s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 138s Selecting previously unselected package libjs-jquery-ui. 138s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 138s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 138s Selecting previously unselected package libjs-json. 138s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 138s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 138s Selecting previously unselected package libjs-lunr. 138s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 138s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 138s Selecting previously unselected package libjs-prettify. 138s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 138s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 138s Selecting previously unselected package libkpathsea6:s390x. 138s Preparing to unpack .../090-libkpathsea6_2023.20230311.66589-9_s390x.deb ... 138s Unpacking libkpathsea6:s390x (2023.20230311.66589-9) ... 138s Selecting previously unselected package liblapack3:s390x. 138s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 138s Unpacking liblapack3:s390x (3.12.0-3) ... 138s Selecting previously unselected package liblapack-dev:s390x. 138s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 138s Unpacking liblapack-dev:s390x (3.12.0-3) ... 138s Selecting previously unselected package liblua5.4-0:s390x. 138s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 138s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 138s Selecting previously unselected package libncurses-dev:s390x. 138s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 138s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 138s Selecting previously unselected package libthai-data. 138s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 138s Unpacking libthai-data (0.1.29-2) ... 138s Selecting previously unselected package libthai0:s390x. 138s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 138s Unpacking libthai0:s390x (0.1.29-2) ... 138s Selecting previously unselected package libpango-1.0-0:s390x. 138s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 138s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 138s Selecting previously unselected package libpangoft2-1.0-0:s390x. 138s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 138s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 138s Selecting previously unselected package libpangocairo-1.0-0:s390x. 138s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 138s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 138s Selecting previously unselected package libpaper1:s390x. 138s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 138s Unpacking libpaper1:s390x (1.1.29) ... 138s Selecting previously unselected package libpaper-utils. 138s Preparing to unpack .../101-libpaper-utils_1.1.29_s390x.deb ... 138s Unpacking libpaper-utils (1.1.29) ... 138s Selecting previously unselected package libpcre2-16-0:s390x. 138s Preparing to unpack .../102-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 138s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 138s Selecting previously unselected package libpcre2-32-0:s390x. 138s Preparing to unpack .../103-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 138s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 138s Selecting previously unselected package libpcre2-posix3:s390x. 138s Preparing to unpack .../104-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 138s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 138s Selecting previously unselected package libpcre2-dev:s390x. 138s Preparing to unpack .../105-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 138s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 138s Selecting previously unselected package libpkgconf3:s390x. 138s Preparing to unpack .../106-libpkgconf3_1.8.1-2_s390x.deb ... 138s Unpacking libpkgconf3:s390x (1.8.1-2) ... 138s Selecting previously unselected package zlib1g-dev:s390x. 138s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 138s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 139s Selecting previously unselected package libpng-dev:s390x. 139s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 139s Unpacking libpng-dev:s390x (1.6.43-1) ... 139s Selecting previously unselected package libpotrace0:s390x. 139s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 139s Unpacking libpotrace0:s390x (1.16-2) ... 139s Selecting previously unselected package libptexenc1:s390x. 139s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 139s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 139s Selecting previously unselected package libreadline-dev:s390x. 139s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 139s Unpacking libreadline-dev:s390x (8.2-3) ... 139s Selecting previously unselected package libsharpyuv0:s390x. 139s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 139s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 139s Selecting previously unselected package libsm6:s390x. 139s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 139s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 139s Selecting previously unselected package libsynctex2:s390x. 139s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 139s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 139s Selecting previously unselected package libtcl8.6:s390x. 139s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 139s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 139s Selecting previously unselected package libteckit0:s390x. 139s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 139s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 139s Selecting previously unselected package libtexlua53-5:s390x. 139s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 139s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 139s Selecting previously unselected package libjbig0:s390x. 139s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 139s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 139s Selecting previously unselected package libwebp7:s390x. 139s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 139s Unpacking libwebp7:s390x (1.3.2-0.4) ... 139s Selecting previously unselected package libtiff6:s390x. 139s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 139s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 139s Selecting previously unselected package libxft2:s390x. 139s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 139s Unpacking libxft2:s390x (2.3.6-1) ... 139s Selecting previously unselected package libxss1:s390x. 139s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 139s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 139s Selecting previously unselected package libtk8.6:s390x. 139s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 139s Unpacking libtk8.6:s390x (8.6.13-2) ... 139s Selecting previously unselected package libxt6:s390x. 139s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 139s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 139s Selecting previously unselected package libxmu6:s390x. 139s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 139s Unpacking libxmu6:s390x (2:1.1.3-3) ... 139s Selecting previously unselected package libxpm4:s390x. 139s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 139s Unpacking libxpm4:s390x (1:3.5.17-1) ... 139s Selecting previously unselected package libxaw7:s390x. 139s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 139s Unpacking libxaw7:s390x (2:1.0.14-1) ... 139s Selecting previously unselected package libxi6:s390x. 139s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 139s Unpacking libxi6:s390x (2:1.8.1-1) ... 139s Selecting previously unselected package libzzip-0-13:s390x. 139s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 139s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 139s Selecting previously unselected package zip. 139s Preparing to unpack .../130-zip_3.0-13_s390x.deb ... 139s Unpacking zip (3.0-13) ... 139s Selecting previously unselected package unzip. 139s Preparing to unpack .../131-unzip_6.0-28ubuntu3_s390x.deb ... 139s Unpacking unzip (6.0-28ubuntu3) ... 139s Selecting previously unselected package xdg-utils. 139s Preparing to unpack .../132-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 139s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 139s Selecting previously unselected package r-base-core. 139s Preparing to unpack .../133-r-base-core_4.3.2-1build1_s390x.deb ... 139s Unpacking r-base-core (4.3.2-1build1) ... 140s Selecting previously unselected package r-cran-littler. 140s Preparing to unpack .../134-r-cran-littler_0.3.19-1_s390x.deb ... 140s Unpacking r-cran-littler (0.3.19-1) ... 140s Selecting previously unselected package littler. 140s Preparing to unpack .../135-littler_0.3.19-1_all.deb ... 140s Unpacking littler (0.3.19-1) ... 140s Selecting previously unselected package node-bootstrap-sass. 140s Preparing to unpack .../136-node-bootstrap-sass_3.4.3-2_all.deb ... 140s Unpacking node-bootstrap-sass (3.4.3-2) ... 140s Selecting previously unselected package node-html5shiv. 140s Preparing to unpack .../137-node-html5shiv_3.7.3+dfsg-5_all.deb ... 140s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 140s Selecting previously unselected package node-normalize.css. 140s Preparing to unpack .../138-node-normalize.css_8.0.1-5_all.deb ... 140s Unpacking node-normalize.css (8.0.1-5) ... 140s Selecting previously unselected package pandoc-data. 140s Preparing to unpack .../139-pandoc-data_3.1.3-1_all.deb ... 140s Unpacking pandoc-data (3.1.3-1) ... 140s Selecting previously unselected package pandoc. 140s Preparing to unpack .../140-pandoc_3.1.3+ds-2_s390x.deb ... 140s Unpacking pandoc (3.1.3+ds-2) ... 141s Selecting previously unselected package pkgconf-bin. 141s Preparing to unpack .../141-pkgconf-bin_1.8.1-2_s390x.deb ... 141s Unpacking pkgconf-bin (1.8.1-2) ... 141s Selecting previously unselected package pkgconf:s390x. 141s Preparing to unpack .../142-pkgconf_1.8.1-2_s390x.deb ... 141s Unpacking pkgconf:s390x (1.8.1-2) ... 142s Selecting previously unselected package pkg-config:s390x. 142s Preparing to unpack .../143-pkg-config_1.8.1-2_s390x.deb ... 142s Unpacking pkg-config:s390x (1.8.1-2) ... 142s Selecting previously unselected package liblzma-dev:s390x. 142s Preparing to unpack .../144-liblzma-dev_5.4.5-0.3_s390x.deb ... 142s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 142s Selecting previously unselected package r-base-dev. 142s Preparing to unpack .../145-r-base-dev_4.3.2-1build1_all.deb ... 142s Unpacking r-base-dev (4.3.2-1build1) ... 142s Selecting previously unselected package pkg-r-autopkgtest. 142s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 142s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 142s Selecting previously unselected package r-bioc-biocgenerics. 142s Preparing to unpack .../147-r-bioc-biocgenerics_0.48.1-2_all.deb ... 142s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 142s Selecting previously unselected package r-bioc-biobase. 142s Preparing to unpack .../148-r-bioc-biobase_2.62.0-1_s390x.deb ... 142s Unpacking r-bioc-biobase (2.62.0-1) ... 142s Selecting previously unselected package r-bioc-s4vectors. 142s Preparing to unpack .../149-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 142s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 142s Selecting previously unselected package r-bioc-iranges. 142s Preparing to unpack .../150-r-bioc-iranges_2.36.0-1_s390x.deb ... 142s Unpacking r-bioc-iranges (2.36.0-1) ... 142s Selecting previously unselected package r-cran-dbi. 142s Preparing to unpack .../151-r-cran-dbi_1.2.2-1_all.deb ... 142s Unpacking r-cran-dbi (1.2.2-1) ... 142s Selecting previously unselected package r-cran-bit. 142s Preparing to unpack .../152-r-cran-bit_4.0.5-1_s390x.deb ... 142s Unpacking r-cran-bit (4.0.5-1) ... 142s Selecting previously unselected package r-cran-bit64. 142s Preparing to unpack .../153-r-cran-bit64_4.0.5-1_s390x.deb ... 142s Unpacking r-cran-bit64 (4.0.5-1) ... 142s Selecting previously unselected package r-cran-rlang. 142s Preparing to unpack .../154-r-cran-rlang_1.1.3-1_s390x.deb ... 142s Unpacking r-cran-rlang (1.1.3-1) ... 142s Selecting previously unselected package r-cran-cli. 142s Preparing to unpack .../155-r-cran-cli_3.6.2-1_s390x.deb ... 142s Unpacking r-cran-cli (3.6.2-1) ... 142s Selecting previously unselected package r-cran-glue. 142s Preparing to unpack .../156-r-cran-glue_1.7.0-1_s390x.deb ... 142s Unpacking r-cran-glue (1.7.0-1) ... 142s Selecting previously unselected package r-cran-lifecycle. 142s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 142s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 142s Selecting previously unselected package r-cran-vctrs. 142s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_s390x.deb ... 142s Unpacking r-cran-vctrs (0.6.5-1) ... 142s Selecting previously unselected package r-cran-blob. 142s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 142s Unpacking r-cran-blob (1.2.4-1) ... 142s Selecting previously unselected package r-cran-fastmap. 142s Preparing to unpack .../160-r-cran-fastmap_1.1.1-1_s390x.deb ... 142s Unpacking r-cran-fastmap (1.1.1-1) ... 142s Selecting previously unselected package r-cran-cachem. 142s Preparing to unpack .../161-r-cran-cachem_1.0.8-1_s390x.deb ... 142s Unpacking r-cran-cachem (1.0.8-1) ... 142s Selecting previously unselected package r-cran-memoise. 142s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 142s Unpacking r-cran-memoise (2.0.1-1) ... 142s Selecting previously unselected package r-cran-pkgconfig. 142s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 142s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 142s Selecting previously unselected package r-cran-plogr. 142s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 142s Unpacking r-cran-plogr (0.2.0-3build1) ... 142s Selecting previously unselected package r-cran-cpp11. 142s Preparing to unpack .../165-r-cran-cpp11_0.4.7-1_all.deb ... 142s Unpacking r-cran-cpp11 (0.4.7-1) ... 142s Selecting previously unselected package r-cran-rsqlite. 142s Preparing to unpack .../166-r-cran-rsqlite_2.3.4-1_s390x.deb ... 142s Unpacking r-cran-rsqlite (2.3.4-1) ... 142s Selecting previously unselected package r-cran-curl. 142s Preparing to unpack .../167-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 142s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 142s Selecting previously unselected package r-cran-jsonlite. 142s Preparing to unpack .../168-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 142s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 142s Selecting previously unselected package r-cran-mime. 142s Preparing to unpack .../169-r-cran-mime_0.12-1_s390x.deb ... 142s Unpacking r-cran-mime (0.12-1) ... 142s Selecting previously unselected package r-cran-sys. 142s Preparing to unpack .../170-r-cran-sys_3.4.2-1_s390x.deb ... 142s Unpacking r-cran-sys (3.4.2-1) ... 142s Selecting previously unselected package r-cran-askpass. 142s Preparing to unpack .../171-r-cran-askpass_1.2.0-1_s390x.deb ... 142s Unpacking r-cran-askpass (1.2.0-1) ... 142s Selecting previously unselected package r-cran-openssl. 142s Preparing to unpack .../172-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 142s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 142s Selecting previously unselected package r-cran-r6. 142s Preparing to unpack .../173-r-cran-r6_2.5.1-1_all.deb ... 142s Unpacking r-cran-r6 (2.5.1-1) ... 142s Selecting previously unselected package r-cran-httr. 142s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 142s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 142s Selecting previously unselected package r-cran-png. 142s Preparing to unpack .../175-r-cran-png_0.1-8-1_s390x.deb ... 142s Unpacking r-cran-png (0.1-8-1) ... 142s Selecting previously unselected package r-bioc-zlibbioc. 142s Preparing to unpack .../176-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 142s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-xvector. 142s Preparing to unpack .../177-r-bioc-xvector_0.42.0-1_s390x.deb ... 142s Unpacking r-bioc-xvector (0.42.0-1) ... 143s Selecting previously unselected package r-cran-bitops. 143s Preparing to unpack .../178-r-cran-bitops_1.0-7-1_s390x.deb ... 143s Unpacking r-cran-bitops (1.0-7-1) ... 143s Selecting previously unselected package r-cran-rcurl. 143s Preparing to unpack .../179-r-cran-rcurl_1.98-1.14+dfsg-1_s390x.deb ... 143s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 143s Selecting previously unselected package r-bioc-genomeinfodbdata. 143s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 143s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 143s Selecting previously unselected package r-bioc-genomeinfodb. 143s Preparing to unpack .../181-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 143s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 143s Selecting previously unselected package r-cran-crayon. 143s Preparing to unpack .../182-r-cran-crayon_1.5.2-1_all.deb ... 143s Unpacking r-cran-crayon (1.5.2-1) ... 143s Selecting previously unselected package r-bioc-biostrings. 143s Preparing to unpack .../183-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 143s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 143s Selecting previously unselected package r-bioc-keggrest. 143s Preparing to unpack .../184-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 143s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 143s Selecting previously unselected package r-bioc-annotationdbi. 143s Preparing to unpack .../185-r-bioc-annotationdbi_1.64.1-1_all.deb ... 143s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 143s Selecting previously unselected package r-cran-generics. 143s Preparing to unpack .../186-r-cran-generics_0.1.3-1_all.deb ... 143s Unpacking r-cran-generics (0.1.3-1) ... 143s Selecting previously unselected package r-cran-magrittr. 143s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_s390x.deb ... 143s Unpacking r-cran-magrittr (2.0.3-1) ... 143s Selecting previously unselected package r-cran-fansi. 143s Preparing to unpack .../188-r-cran-fansi_1.0.5-1_s390x.deb ... 143s Unpacking r-cran-fansi (1.0.5-1) ... 143s Selecting previously unselected package r-cran-utf8. 143s Preparing to unpack .../189-r-cran-utf8_1.2.4-1_s390x.deb ... 143s Unpacking r-cran-utf8 (1.2.4-1) ... 143s Selecting previously unselected package r-cran-pillar. 143s Preparing to unpack .../190-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 143s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 143s Selecting previously unselected package r-cran-tibble. 143s Preparing to unpack .../191-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 143s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 143s Selecting previously unselected package r-cran-withr. 143s Preparing to unpack .../192-r-cran-withr_2.5.0-1_all.deb ... 143s Unpacking r-cran-withr (2.5.0-1) ... 143s Selecting previously unselected package r-cran-tidyselect. 143s Preparing to unpack .../193-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 143s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 143s Selecting previously unselected package r-cran-dplyr. 143s Preparing to unpack .../194-r-cran-dplyr_1.1.4-1_s390x.deb ... 143s Unpacking r-cran-dplyr (1.1.4-1) ... 143s Selecting previously unselected package r-cran-purrr. 143s Preparing to unpack .../195-r-cran-purrr_1.0.2-1_s390x.deb ... 143s Unpacking r-cran-purrr (1.0.2-1) ... 143s Selecting previously unselected package r-cran-stringi. 143s Preparing to unpack .../196-r-cran-stringi_1.8.3-1_s390x.deb ... 143s Unpacking r-cran-stringi (1.8.3-1) ... 143s Selecting previously unselected package r-cran-stringr. 143s Preparing to unpack .../197-r-cran-stringr_1.5.1-1_all.deb ... 143s Unpacking r-cran-stringr (1.5.1-1) ... 143s Selecting previously unselected package r-cran-tidyr. 143s Preparing to unpack .../198-r-cran-tidyr_1.3.1-1_s390x.deb ... 143s Unpacking r-cran-tidyr (1.3.1-1) ... 143s Selecting previously unselected package r-cran-dbplyr. 143s Preparing to unpack .../199-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 143s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 143s Selecting previously unselected package r-cran-filelock. 143s Preparing to unpack .../200-r-cran-filelock_1.0.3-1_s390x.deb ... 143s Unpacking r-cran-filelock (1.0.3-1) ... 143s Selecting previously unselected package r-bioc-biocfilecache. 143s Preparing to unpack .../201-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 143s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 143s Selecting previously unselected package r-bioc-biocio. 143s Preparing to unpack .../202-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 143s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 143s Selecting previously unselected package r-cran-formatr. 143s Preparing to unpack .../203-r-cran-formatr_1.14-1_all.deb ... 143s Unpacking r-cran-formatr (1.14-1) ... 143s Selecting previously unselected package r-cran-lambda.r. 143s Preparing to unpack .../204-r-cran-lambda.r_1.2.4-2build1_all.deb ... 143s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 144s Selecting previously unselected package r-cran-futile.options. 144s Preparing to unpack .../205-r-cran-futile.options_1.0.1-3build1_all.deb ... 144s Unpacking r-cran-futile.options (1.0.1-3build1) ... 144s Selecting previously unselected package r-cran-futile.logger. 144s Preparing to unpack .../206-r-cran-futile.logger_1.4.3-4build1_all.deb ... 144s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 144s Selecting previously unselected package r-cran-snow. 144s Preparing to unpack .../207-r-cran-snow_1%3a0.4.4-2_all.deb ... 144s Unpacking r-cran-snow (1:0.4.4-2) ... 144s Selecting previously unselected package r-cran-codetools. 144s Preparing to unpack .../208-r-cran-codetools_0.2-19-1_all.deb ... 144s Unpacking r-cran-codetools (0.2-19-1) ... 144s Selecting previously unselected package r-cran-bh. 144s Preparing to unpack .../209-r-cran-bh_1.84.0-1_all.deb ... 144s Unpacking r-cran-bh (1.84.0-1) ... 144s Selecting previously unselected package r-bioc-biocparallel. 144s Preparing to unpack .../210-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 144s Unpacking r-bioc-biocparallel (1.36.0-1) ... 144s Selecting previously unselected package r-cran-base64enc. 144s Preparing to unpack .../211-r-cran-base64enc_0.1-3-3_s390x.deb ... 144s Unpacking r-cran-base64enc (0.1-3-3) ... 144s Selecting previously unselected package r-cran-digest. 144s Preparing to unpack .../212-r-cran-digest_0.6.34-1_s390x.deb ... 144s Unpacking r-cran-digest (0.6.34-1) ... 144s Selecting previously unselected package r-cran-ellipsis. 144s Preparing to unpack .../213-r-cran-ellipsis_0.3.2-2_s390x.deb ... 144s Unpacking r-cran-ellipsis (0.3.2-2) ... 144s Selecting previously unselected package r-cran-htmltools. 144s Preparing to unpack .../214-r-cran-htmltools_0.5.7-1_s390x.deb ... 144s Unpacking r-cran-htmltools (0.5.7-1) ... 144s Selecting previously unselected package r-cran-evaluate. 144s Preparing to unpack .../215-r-cran-evaluate_0.23-1_all.deb ... 144s Unpacking r-cran-evaluate (0.23-1) ... 144s Selecting previously unselected package r-cran-xfun. 144s Preparing to unpack .../216-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 144s Unpacking r-cran-xfun (0.41+dfsg-1) ... 144s Selecting previously unselected package r-cran-highr. 144s Preparing to unpack .../217-r-cran-highr_0.10+dfsg-1_all.deb ... 144s Unpacking r-cran-highr (0.10+dfsg-1) ... 144s Selecting previously unselected package r-cran-yaml. 144s Preparing to unpack .../218-r-cran-yaml_2.3.8-1_s390x.deb ... 144s Unpacking r-cran-yaml (2.3.8-1) ... 144s Selecting previously unselected package libjs-mathjax. 144s Preparing to unpack .../219-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 144s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 145s Selecting previously unselected package r-cran-knitr. 145s Preparing to unpack .../220-r-cran-knitr_1.45+dfsg-1_all.deb ... 145s Unpacking r-cran-knitr (1.45+dfsg-1) ... 145s Selecting previously unselected package r-cran-jquerylib. 145s Preparing to unpack .../221-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 145s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 145s Selecting previously unselected package r-cran-fs. 145s Preparing to unpack .../222-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 145s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 145s Selecting previously unselected package r-cran-rappdirs. 145s Preparing to unpack .../223-r-cran-rappdirs_0.3.3-1_s390x.deb ... 145s Unpacking r-cran-rappdirs (0.3.3-1) ... 145s Selecting previously unselected package r-cran-sass. 145s Preparing to unpack .../224-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 145s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 145s Selecting previously unselected package r-cran-bslib. 145s Preparing to unpack .../225-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 145s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 145s Selecting previously unselected package r-cran-fontawesome. 145s Preparing to unpack .../226-r-cran-fontawesome_0.5.2-1_all.deb ... 145s Unpacking r-cran-fontawesome (0.5.2-1) ... 145s Selecting previously unselected package r-cran-tinytex. 145s Preparing to unpack .../227-r-cran-tinytex_0.49-1_all.deb ... 145s Unpacking r-cran-tinytex (0.49-1) ... 145s Selecting previously unselected package libjs-modernizr. 145s Preparing to unpack .../228-libjs-modernizr_2.6.2+ds1-5_all.deb ... 145s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 145s Selecting previously unselected package r-cran-pkgkitten. 145s Preparing to unpack .../229-r-cran-pkgkitten_0.2.3-1_all.deb ... 145s Unpacking r-cran-pkgkitten (0.2.3-1) ... 145s Selecting previously unselected package r-cran-rcpp. 145s Preparing to unpack .../230-r-cran-rcpp_1.0.12-1_s390x.deb ... 145s Unpacking r-cran-rcpp (1.0.12-1) ... 146s Selecting previously unselected package r-cran-later. 146s Preparing to unpack .../231-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 146s Unpacking r-cran-later (1.3.2+dfsg-1) ... 146s Selecting previously unselected package r-cran-promises. 146s Preparing to unpack .../232-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 146s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 146s Selecting previously unselected package r-cran-httpuv. 146s Preparing to unpack .../233-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 146s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 146s Selecting previously unselected package r-cran-xtable. 146s Preparing to unpack .../234-r-cran-xtable_1%3a1.8-4-2_all.deb ... 146s Unpacking r-cran-xtable (1:1.8-4-2) ... 146s Selecting previously unselected package r-cran-sourcetools. 146s Preparing to unpack .../235-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 146s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 146s Selecting previously unselected package r-cran-commonmark. 146s Preparing to unpack .../236-r-cran-commonmark_1.9.1-1_s390x.deb ... 146s Unpacking r-cran-commonmark (1.9.1-1) ... 146s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 146s Preparing to unpack .../237-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 146s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 146s Selecting previously unselected package r-cran-shiny. 146s Preparing to unpack .../238-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 146s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 146s Selecting previously unselected package r-cran-rmarkdown. 146s Preparing to unpack .../239-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 146s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 146s Selecting previously unselected package r-cran-bookdown. 146s Preparing to unpack .../240-r-cran-bookdown_0.37+dfsg-1_all.deb ... 146s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 146s Selecting previously unselected package r-cran-biocmanager. 146s Preparing to unpack .../241-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 146s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 146s Selecting previously unselected package tex-common. 146s Preparing to unpack .../242-tex-common_6.18_all.deb ... 146s Unpacking tex-common (6.18) ... 146s Selecting previously unselected package t1utils. 146s Preparing to unpack .../243-t1utils_1.41-4build2_s390x.deb ... 146s Unpacking t1utils (1.41-4build2) ... 146s Selecting previously unselected package texlive-binaries. 146s Preparing to unpack .../244-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 146s Unpacking texlive-binaries (2023.20230311.66589-9) ... 146s Selecting previously unselected package texlive-base. 146s Preparing to unpack .../245-texlive-base_2023.20240207-1_all.deb ... 146s Unpacking texlive-base (2023.20240207-1) ... 149s Selecting previously unselected package texlive-latex-base. 149s Preparing to unpack .../246-texlive-latex-base_2023.20240207-1_all.deb ... 149s Unpacking texlive-latex-base (2023.20240207-1) ... 149s Selecting previously unselected package texlive-bibtex-extra. 149s Preparing to unpack .../247-texlive-bibtex-extra_2023.20240207-1_all.deb ... 149s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 157s Selecting previously unselected package r-bioc-biocstyle. 157s Preparing to unpack .../248-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 157s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 157s Selecting previously unselected package r-cran-xml. 157s Preparing to unpack .../249-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 157s Unpacking r-cran-xml (3.99-0.16.1-1) ... 157s Selecting previously unselected package r-cran-hms. 157s Preparing to unpack .../250-r-cran-hms_1.1.3-1_all.deb ... 157s Unpacking r-cran-hms (1.1.3-1) ... 157s Selecting previously unselected package r-cran-prettyunits. 157s Preparing to unpack .../251-r-cran-prettyunits_1.2.0-1_all.deb ... 157s Unpacking r-cran-prettyunits (1.2.0-1) ... 157s Selecting previously unselected package r-cran-progress. 157s Preparing to unpack .../252-r-cran-progress_1.2.3-1_all.deb ... 157s Unpacking r-cran-progress (1.2.3-1) ... 157s Selecting previously unselected package r-cran-xml2. 157s Preparing to unpack .../253-r-cran-xml2_1.3.6-1_s390x.deb ... 157s Unpacking r-cran-xml2 (1.3.6-1) ... 157s Selecting previously unselected package r-bioc-biomart. 157s Preparing to unpack .../254-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 157s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 157s Selecting previously unselected package r-cran-lattice. 157s Preparing to unpack .../255-r-cran-lattice_0.22-5-1_s390x.deb ... 157s Unpacking r-cran-lattice (0.22-5-1) ... 157s Selecting previously unselected package r-cran-matrix. 157s Preparing to unpack .../256-r-cran-matrix_1.6-5-1_s390x.deb ... 157s Unpacking r-cran-matrix (1.6-5-1) ... 157s Selecting previously unselected package r-cran-matrixstats. 157s Preparing to unpack .../257-r-cran-matrixstats_1.2.0-1_s390x.deb ... 157s Unpacking r-cran-matrixstats (1.2.0-1) ... 157s Selecting previously unselected package r-bioc-matrixgenerics. 157s Preparing to unpack .../258-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 157s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 157s Selecting previously unselected package r-cran-abind. 157s Preparing to unpack .../259-r-cran-abind_1.4-5-2_all.deb ... 157s Unpacking r-cran-abind (1.4-5-2) ... 157s Selecting previously unselected package r-bioc-s4arrays. 157s Preparing to unpack .../260-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 157s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-sparsearray. 157s Preparing to unpack .../261-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 157s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 157s Selecting previously unselected package r-bioc-delayedarray. 157s Preparing to unpack .../262-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 157s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-genomicranges. 157s Preparing to unpack .../263-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 157s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 157s Selecting previously unselected package r-bioc-summarizedexperiment. 157s Preparing to unpack .../264-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 157s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-rhtslib. 157s Preparing to unpack .../265-r-bioc-rhtslib_2.4.1+dfsg-3build1_s390x.deb ... 157s Unpacking r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 157s Selecting previously unselected package r-bioc-rsamtools. 157s Preparing to unpack .../266-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 157s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 157s Selecting previously unselected package r-bioc-genomicalignments. 157s Preparing to unpack .../267-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 157s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 157s Selecting previously unselected package r-cran-rjson. 157s Preparing to unpack .../268-r-cran-rjson_0.2.21-1_s390x.deb ... 157s Unpacking r-cran-rjson (0.2.21-1) ... 157s Selecting previously unselected package r-cran-restfulr. 157s Preparing to unpack .../269-r-cran-restfulr_0.0.15-1_s390x.deb ... 157s Unpacking r-cran-restfulr (0.0.15-1) ... 157s Selecting previously unselected package r-bioc-rtracklayer. 157s Preparing to unpack .../270-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 157s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 158s Selecting previously unselected package r-bioc-genomicfeatures. 158s Preparing to unpack .../271-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 158s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 158s Selecting previously unselected package r-cran-hwriter. 158s Preparing to unpack .../272-r-cran-hwriter_1.3.2.1-1_all.deb ... 158s Unpacking r-cran-hwriter (1.3.2.1-1) ... 158s Selecting previously unselected package r-cran-jpeg. 158s Preparing to unpack .../273-r-cran-jpeg_0.1-10-1_s390x.deb ... 158s Unpacking r-cran-jpeg (0.1-10-1) ... 158s Selecting previously unselected package r-cran-rcolorbrewer. 158s Preparing to unpack .../274-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 158s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 158s Selecting previously unselected package r-cran-deldir. 158s Preparing to unpack .../275-r-cran-deldir_2.0-4-1_s390x.deb ... 158s Unpacking r-cran-deldir (2.0-4-1) ... 158s Selecting previously unselected package r-cran-rcppeigen. 158s Preparing to unpack .../276-r-cran-rcppeigen_0.3.3.9.4-1_s390x.deb ... 158s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 158s Selecting previously unselected package r-cran-interp. 158s Preparing to unpack .../277-r-cran-interp_1.1-6-1_s390x.deb ... 158s Unpacking r-cran-interp (1.1-6-1) ... 158s Selecting previously unselected package r-cran-mass. 158s Preparing to unpack .../278-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 158s Unpacking r-cran-mass (7.3-60.0.1-1) ... 158s Selecting previously unselected package r-cran-latticeextra. 158s Preparing to unpack .../279-r-cran-latticeextra_0.6-30-1_all.deb ... 158s Unpacking r-cran-latticeextra (0.6-30-1) ... 158s Selecting previously unselected package r-bioc-shortread. 158s Preparing to unpack .../280-r-bioc-shortread_1.60.0-2_s390x.deb ... 158s Unpacking r-bioc-shortread (1.60.0-2) ... 158s Selecting previously unselected package r-cran-runit. 158s Preparing to unpack .../281-r-cran-runit_0.4.32-3_all.deb ... 158s Unpacking r-cran-runit (0.4.32-3) ... 158s Selecting previously unselected package autopkgtest-satdep. 158s Preparing to unpack .../282-1-autopkgtest-satdep.deb ... 158s Unpacking autopkgtest-satdep (0) ... 158s Setting up libjs-json (0~20221030+~1.0.8-1) ... 158s Setting up javascript-common (11+nmu1) ... 158s Setting up libgraphite2-3:s390x (1.3.14-2) ... 158s Setting up libpixman-1-0:s390x (0.42.2-1) ... 158s Setting up libsharpyuv0:s390x (1.3.2-0.4) ... 158s Setting up libpaper1:s390x (1.1.29) ... 158s 158s Creating config file /etc/papersize with new version 158s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 158s Setting up libxpm4:s390x (1:3.5.17-1) ... 158s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 158s Setting up libxi6:s390x (2:1.8.1-1) ... 158s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 158s Setting up libdatrie1:s390x (0.2.13-3) ... 158s Setting up libjs-popper.js (1.16.1+ds-6) ... 158s Setting up libxcb-render0:s390x (1.15-1) ... 158s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 158s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 158s Setting up 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/usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 163s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 163s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 163s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 163s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 163s Setting up r-cran-bitops (1.0-7-1) ... 163s Setting up r-cran-bit64 (4.0.5-1) ... 163s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 163s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 163s Setting up r-cran-deldir (2.0-4-1) ... 163s Setting up r-cran-askpass (1.2.0-1) ... 163s Setting up r-cran-fastmap (1.1.1-1) ... 163s Setting up r-cran-png (0.1-8-1) ... 163s Setting up r-bioc-biobase (2.62.0-1) ... 163s Setting up r-cran-jsonlite 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(1.0.2-1) ... 163s Setting up r-cran-blob (1.2.4-1) ... 163s Setting up r-cran-htmltools (0.5.7-1) ... 163s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 163s Setting up r-bioc-xvector (0.42.0-1) ... 163s Setting up r-cran-sass (0.4.8+dfsg-1) ... 163s Setting up r-cran-dplyr (1.1.4-1) ... 163s Setting up r-cran-rsqlite (2.3.4-1) ... 163s Setting up r-cran-progress (1.2.3-1) ... 163s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 163s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 163s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 163s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 163s Setting up r-cran-fontawesome (0.5.2-1) ... 163s Setting up r-cran-latticeextra (0.6-30-1) ... 163s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 163s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 163s Setting up r-cran-tidyr (1.3.1-1) ... 163s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 163s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 163s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 163s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 163s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 163s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 163s Setting up r-bioc-annotationdbi (1.64.1-1) ... 163s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 163s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 163s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 163s Setting up r-bioc-genomicalignments (1.38.2-1) ... 163s Setting up r-cran-bookdown (0.37+dfsg-1) ... 163s Setting up r-bioc-rtracklayer (1.62.0-1) ... 163s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 163s Setting up r-bioc-shortread (1.60.0-2) ... 163s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 163s Setting up autopkgtest-satdep (0) ... 163s Processing triggers for man-db (2.12.0-3) ... 164s Processing triggers for install-info (7.1-3) ... 164s Processing triggers for libc-bin (2.39-0ubuntu2) ... 164s Processing triggers for tex-common (6.18) ... 164s Running updmap-sys. This may take some time... done. 164s Running mktexlsr /var/lib/texmf ... done. 164s Building format(s) --all. 210s This may take some time... done. 217s (Reading database ... 102326 files and directories currently installed.) 217s Removing autopkgtest-satdep (0) ... 218s autopkgtest [18:25:52]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 218s autopkgtest [18:25:52]: test pkg-r-autopkgtest: [----------------------- 218s Test: Try to load the R library ShortRead 218s 218s R version 4.3.2 (2023-10-31) -- "Eye Holes" 218s Copyright (C) 2023 The R Foundation for Statistical Computing 218s Platform: s390x-ibm-linux-gnu (64-bit) 218s 218s R is free software and comes with ABSOLUTELY NO WARRANTY. 218s You are welcome to redistribute it under certain conditions. 218s Type 'license()' or 'licence()' for distribution details. 218s 218s R is a collaborative project with many contributors. 218s Type 'contributors()' for more information and 218s 'citation()' on how to cite R or R packages in publications. 218s 218s Type 'demo()' for some demos, 'help()' for on-line help, or 218s 'help.start()' for an HTML browser interface to help. 218s Type 'q()' to quit R. 218s 218s > library('ShortRead') 218s Loading required package: BiocGenerics 218s 218s Attaching package: ‘BiocGenerics’ 218s 218s The following objects are masked from ‘package:stats’: 218s 218s IQR, mad, sd, var, xtabs 218s 218s The following objects are masked from ‘package:base’: 218s 218s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 218s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 218s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 218s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 218s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 218s table, tapply, union, unique, unsplit, which.max, which.min 218s 218s Loading required package: BiocParallel 218s Loading required package: Biostrings 218s Loading required package: S4Vectors 218s Loading required package: stats4 219s 219s Attaching package: ‘S4Vectors’ 219s 219s The following object is masked from ‘package:utils’: 219s 219s findMatches 219s 219s The following objects are masked from ‘package:base’: 219s 219s expand.grid, I, unname 219s 219s Loading required package: IRanges 220s Loading required package: XVector 220s Loading required package: GenomeInfoDb 221s 221s Attaching package: ‘Biostrings’ 221s 221s The following object is masked from ‘package:base’: 221s 221s strsplit 221s 221s Loading required package: Rsamtools 221s Loading required package: GenomicRanges 222s Loading required package: GenomicAlignments 222s Loading required package: SummarizedExperiment 222s Loading required package: MatrixGenerics 222s Loading required package: matrixStats 222s 222s Attaching package: ‘MatrixGenerics’ 222s 222s The following objects are masked from ‘package:matrixStats’: 222s 222s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 222s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 222s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 222s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 222s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 222s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 222s colWeightedMeans, colWeightedMedians, colWeightedSds, 222s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 222s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 222s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 222s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 222s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 222s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 222s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 222s rowWeightedSds, rowWeightedVars 222s 222s Loading required package: Biobase 222s Welcome to Bioconductor 222s 222s Vignettes contain introductory material; view with 222s 'browseVignettes()'. To cite Bioconductor, see 222s 'citation("Biobase")', and for packages 'citation("pkgname")'. 222s 222s 222s Attaching package: ‘Biobase’ 222s 222s The following object is masked from ‘package:MatrixGenerics’: 222s 222s rowMedians 222s 222s The following objects are masked from ‘package:matrixStats’: 222s 222s anyMissing, rowMedians 222s 227s > 227s > 227s Other tests are currently unsupported! 227s They will be progressively added. 228s autopkgtest [18:26:02]: test pkg-r-autopkgtest: -----------------------] 228s autopkgtest [18:26:02]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 228s pkg-r-autopkgtest PASS 228s autopkgtest [18:26:02]: @@@@@@@@@@@@@@@@@@@@ summary 228s pkg-r-autopkgtest PASS 239s Creating nova instance adt-noble-s390x-r-bioc-shortread-20240316-182214-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...