0s autopkgtest [18:21:20]: starting date and time: 2024-03-16 18:21:20+0000 0s autopkgtest [18:21:20]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:21:20]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.cde1cly6/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rhtslib,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-rsamtools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rhtslib/2.4.1+dfsg-3build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-19.secgroup --name adt-noble-s390x-r-bioc-rsamtools-20240316-182120-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 203s autopkgtest [18:24:43]: testbed dpkg architecture: s390x 203s autopkgtest [18:24:43]: testbed apt version: 2.7.12 203s autopkgtest [18:24:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup 204s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 205s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 205s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 205s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 205s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 205s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 205s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 205s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 205s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 205s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 205s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 205s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 205s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 207s Fetched 8760 kB in 2s (3960 kB/s) 207s Reading package lists... 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Calculating upgrade... 210s The following packages will be REMOVED: 210s libssl3 210s The following NEW packages will be installed: 210s libssl3t64 210s The following packages have been kept back: 210s curl 210s The following packages will be upgraded: 210s openssl ubuntu-minimal ubuntu-standard 210s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 210s Need to get 2680 kB of archives. 210s After this operation, 23.6 kB of additional disk space will be used. 210s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 211s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 211s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 211s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 211s Fetched 2680 kB in 1s (3847 kB/s) 211s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 211s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 211s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 211s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 211s wget depends on libssl3 (>= 3.0.0). 211s tnftp depends on libssl3 (>= 3.0.0). 211s tcpdump depends on libssl3 (>= 3.0.0). 211s systemd-resolved depends on libssl3 (>= 3.0.0). 211s systemd depends on libssl3 (>= 3.0.0). 211s sudo depends on libssl3 (>= 3.0.0). 211s s390-tools depends on libssl3 (>= 3.0.0). 211s rsync depends on libssl3 (>= 3.0.0). 211s python3-cryptography depends on libssl3 (>= 3.0.0). 211s openssh-server depends on libssl3 (>= 3.0.10). 211s openssh-client depends on libssl3 (>= 3.0.10). 211s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 211s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 211s libssh-4:s390x depends on libssl3 (>= 3.0.0). 211s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 211s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 211s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 211s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 211s libnvme1 depends on libssl3 (>= 3.0.0). 211s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 211s libkmod2:s390x depends on libssl3 (>= 3.0.0). 211s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 211s libcurl4:s390x depends on libssl3 (>= 3.0.0). 211s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 211s kmod depends on libssl3 (>= 3.0.0). 211s dhcpcd-base depends on libssl3 (>= 3.0.0). 211s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 211s 211s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 211s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 211s Selecting previously unselected package libssl3t64:s390x. 211s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 211s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 211s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 211s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 211s Unpacking ubuntu-minimal (1.536) over (1.535) ... 211s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 211s Unpacking ubuntu-standard (1.536) over (1.535) ... 211s Setting up ubuntu-minimal (1.536) ... 211s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 211s Setting up ubuntu-standard (1.536) ... 211s Setting up openssl (3.0.13-0ubuntu1) ... 211s Processing triggers for man-db (2.12.0-3) ... 212s Processing triggers for libc-bin (2.39-0ubuntu2) ... 212s Reading package lists... 212s Building dependency tree... 212s Reading state information... 212s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 213s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 213s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 213s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 213s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 214s Reading package lists... 214s Reading package lists... 214s Building dependency tree... 214s Reading state information... 214s Calculating upgrade... 215s The following packages have been kept back: 215s curl 215s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 215s Reading package lists... 215s Building dependency tree... 215s Reading state information... 215s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 217s autopkgtest [18:24:57]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 218s autopkgtest [18:24:58]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rsamtools 219s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rsamtools 2.18.0+dfsg-1 (dsc) [2354 B] 219s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rsamtools 2.18.0+dfsg-1 (tar) [2463 kB] 219s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-rsamtools 2.18.0+dfsg-1 (diff) [6804 B] 220s gpgv: Signature made Thu Nov 30 10:32:59 2023 UTC 220s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 220s gpgv: issuer "tillea@rki.de" 220s gpgv: Can't check signature: No public key 220s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rsamtools_2.18.0+dfsg-1.dsc: no acceptable signature found 220s autopkgtest [18:25:00]: testing package r-bioc-rsamtools version 2.18.0+dfsg-1 220s autopkgtest [18:25:00]: build not needed 223s autopkgtest [18:25:03]: test pkg-r-autopkgtest: preparing testbed 224s Reading package lists... 224s Building dependency tree... 224s Reading state information... 225s Starting pkgProblemResolver with broken count: 0 225s Starting 2 pkgProblemResolver with broken count: 0 225s Done 225s The following additional packages will be installed: 225s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 225s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 225s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 225s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 225s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 225s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 225s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 225s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 225s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 225s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 225s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 225s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 225s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 225s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 225s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 225s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 225s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 225s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 225s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 225s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 225s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 225s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 225s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 225s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 225s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 225s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 225s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 225s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 225s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 225s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 225s r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 225s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 225s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 225s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 225s r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 225s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 225s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 225s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 225s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 225s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 225s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 225s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 225s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 225s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 225s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 225s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 225s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 225s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 225s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 225s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 225s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 225s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 225s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 225s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 225s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 225s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 225s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 225s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 225s Suggested packages: 225s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 225s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 225s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 225s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 225s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 225s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 225s libboost-context1.83-dev libboost-contract1.83-dev 225s libboost-coroutine1.83-dev libboost-date-time1.83-dev 225s libboost-exception1.83-dev libboost-fiber1.83-dev 225s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 225s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 225s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 225s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 225s libboost-numpy1.83-dev libboost-program-options1.83-dev 225s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 225s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 225s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 225s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 225s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 225s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 225s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 225s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 225s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 225s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 225s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 225s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 225s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-cran-testthat 225s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 225s r-cran-doparallel r-bioc-variantannotation r-cran-batchtools 225s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-bsgenome 225s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 225s r-cran-r.utils r-bioc-edger r-bioc-ensembldb r-bioc-annotationfilter 225s r-cran-markdown r-bioc-gviz r-bioc-annotationhub r-bioc-dexseq 225s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 225s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-polyclip r-cran-lubridate 225s r-cran-sp r-cran-ggplot2 r-cran-gridextra r-cran-scatterplot3d r-cran-getopt 225s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-scales 225s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 225s r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio r-cran-callr 225s r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper 225s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 225s texlive-latex-base-doc wp2latex 225s Recommended packages: 225s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 225s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 225s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 225s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 225s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 225s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 225s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 225s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 225s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 225s r-cran-cairo r-cran-markdown r-cran-ragg r-cran-readr r-cran-r.rsp r-cran-sf 225s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 225s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 225s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 225s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 225s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 225s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 225s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 225s The following packages will be REMOVED: 225s libcurl4 libpsl5 225s The following NEW packages will be installed: 225s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 225s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 225s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 225s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 225s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 225s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 225s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 225s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 225s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 225s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 225s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 225s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 225s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 225s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 225s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 225s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 225s libjs-popper.js libjs-prettify libjs-sifter.js 225s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 225s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 225s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 225s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 225s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 225s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 225s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 225s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 225s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 225s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 225s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 225s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 225s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 225s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 225s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 225s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 225s r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 225s r-bioc-s4arrays r-bioc-s4vectors r-bioc-shortread r-bioc-sparsearray 225s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 225s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 225s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 225s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 225s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-deldir 225s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 225s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 225s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 225s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 225s r-cran-hwriter r-cran-interp r-cran-jpeg r-cran-jquerylib r-cran-jsonlite 225s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra 225s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 225s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 225s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 225s r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs 225s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl 225s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 225s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 225s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 225s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 225s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 225s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 225s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 225s The following packages will be upgraded: 225s curl 225s 1 upgraded, 284 newly installed, 2 to remove and 0 not upgraded. 225s Need to get 438 MB/438 MB of archives. 225s After this operation, 1409 MB of additional disk space will be used. 225s Get:1 /tmp/autopkgtest.xLPP20/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [792 B] 225s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 225s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 225s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 226s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 226s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 226s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 226s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 226s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 226s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 226s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 226s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 226s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 226s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 226s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 226s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 226s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 226s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 226s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 226s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 226s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 226s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 226s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 226s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 226s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 227s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 227s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 227s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 227s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 228s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 228s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 228s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 228s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 228s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 228s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 228s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 228s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 228s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 228s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 228s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 228s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 228s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 228s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 228s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 228s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 228s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 228s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 228s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 228s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 228s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 228s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 228s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 228s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 228s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 228s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 228s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 228s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 228s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 228s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 228s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 228s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 228s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 228s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 228s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 228s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 228s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 228s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 228s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 228s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 228s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 228s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 228s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 228s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 228s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 228s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 228s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 228s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 228s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 228s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 228s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 228s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 228s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 229s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 229s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 229s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 229s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 229s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 229s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 229s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 229s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 229s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 229s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 229s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 229s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 229s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 229s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 229s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 229s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 229s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 229s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 229s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 229s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 229s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 229s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 229s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 229s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 229s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 229s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 229s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 229s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 229s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 229s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 229s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 229s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 229s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 230s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 230s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 230s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 230s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 230s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 230s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 230s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 230s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 230s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 230s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 230s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 230s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 230s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 230s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 230s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 230s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 230s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 230s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 230s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 230s Get:135 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 230s Get:136 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 230s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 231s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 231s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 231s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 231s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 231s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 231s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 231s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 233s Get:145 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 233s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 233s Get:147 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 233s Get:148 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 233s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 233s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 233s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 233s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 233s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 233s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 233s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 233s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 233s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 233s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 233s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 233s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 233s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 233s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 233s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 233s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 233s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 233s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 233s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 233s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 234s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 234s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 234s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 234s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 234s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 234s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 234s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 234s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 234s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 234s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 234s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 234s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 234s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 234s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 234s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1 [794 kB] 234s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 234s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 234s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 234s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 235s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 235s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 235s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 235s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 235s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 235s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 235s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 235s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 235s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 235s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 235s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 235s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 235s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 236s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 236s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 236s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 236s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 236s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 236s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 236s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 236s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 236s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 236s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 236s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 236s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 236s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 236s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 236s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 236s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 236s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 236s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 236s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 236s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 236s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 236s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 236s Get:223 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 237s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 237s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 237s Get:226 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 237s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 237s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 237s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 237s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 237s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 237s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 237s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 237s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 237s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 237s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 237s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 237s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 237s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 237s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 237s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 237s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 237s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 237s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 237s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 237s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 237s Get:247 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 237s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 238s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 238s Get:250 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 238s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 241s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 241s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 242s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 242s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 242s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 242s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 242s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 242s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 242s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 242s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 242s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 242s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 242s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 242s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 242s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 242s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 242s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 242s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-3build1 [1409 kB] 242s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 242s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 242s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 242s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 242s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 243s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 243s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hwriter all 1.3.2.1-1 [106 kB] 243s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jpeg s390x 0.1-10-1 [31.3 kB] 243s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 243s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-deldir s390x 2.0-4-1 [271 kB] 243s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcppeigen s390x 0.3.3.9.4-1 [1187 kB] 243s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-interp s390x 1.1-6-1 [1465 kB] 243s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 243s Get:283 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-latticeextra all 0.6-30-1 [2198 kB] 243s Get:284 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-shortread s390x 1.60.0-2 [5204 kB] 243s Get:285 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-runit all 0.4.32-3 [283 kB] 244s Preconfiguring packages ... 244s Fetched 438 MB in 18s (24.2 MB/s) 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 244s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 244s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 244s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 244s wget depends on libpsl5 (>= 0.16.0). 244s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 244s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 244s 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 244s Removing libpsl5:s390x (0.21.2-1build1) ... 244s Selecting previously unselected package libpsl5t64:s390x. 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 244s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 244s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 244s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 244s s390-tools depends on libcurl4 (>= 7.16.2). 244s 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 244s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 244s Selecting previously unselected package libcurl4t64:s390x. 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 244s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 244s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 244s Selecting previously unselected package libc-dev-bin. 244s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 244s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 244s Selecting previously unselected package linux-libc-dev:s390x. 244s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 244s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 244s Selecting previously unselected package libcrypt-dev:s390x. 244s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 244s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 244s Selecting previously unselected package libtirpc-dev:s390x. 244s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 244s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 244s Selecting previously unselected package libnsl-dev:s390x. 244s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 244s Unpacking libnsl-dev:s390x (1.3.0-3) ... 244s Selecting previously unselected package rpcsvc-proto. 244s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 244s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 244s Selecting previously unselected package libc6-dev:s390x. 244s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 244s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 245s Selecting previously unselected package libisl23:s390x. 245s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 245s Unpacking libisl23:s390x (0.26-3) ... 245s Selecting previously unselected package libmpc3:s390x. 245s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 245s Unpacking libmpc3:s390x (1.3.1-1) ... 245s Selecting previously unselected package cpp-13-s390x-linux-gnu. 245s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 245s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 245s Selecting previously unselected package cpp-13. 245s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 245s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 245s Selecting previously unselected package cpp-s390x-linux-gnu. 245s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 245s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 245s Selecting previously unselected package cpp. 245s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 245s Unpacking cpp (4:13.2.0-7ubuntu1) ... 245s Selecting previously unselected package libcc1-0:s390x. 245s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libgomp1:s390x. 245s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libitm1:s390x. 245s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libatomic1:s390x. 245s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libasan8:s390x. 245s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libubsan1:s390x. 245s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 245s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 245s Selecting previously unselected package libgcc-13-dev:s390x. 245s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 245s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 245s Selecting previously unselected package gcc-13-s390x-linux-gnu. 245s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 245s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 245s Selecting previously unselected package gcc-13. 245s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 245s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 245s Selecting previously unselected package gcc-s390x-linux-gnu. 245s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 245s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package gcc. 246s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 246s Unpacking gcc (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package libstdc++-13-dev:s390x. 246s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package g++-13-s390x-linux-gnu. 246s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package g++-13. 246s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking g++-13 (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package g++-s390x-linux-gnu. 246s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 246s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package g++. 246s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 246s Unpacking g++ (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package build-essential. 246s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 246s Unpacking build-essential (12.10ubuntu1) ... 246s Selecting previously unselected package dctrl-tools. 246s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 246s Unpacking dctrl-tools (2.24-3build2) ... 246s Selecting previously unselected package libfreetype6:s390x. 246s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 246s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 246s Selecting previously unselected package fonts-dejavu-mono. 246s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 246s Unpacking fonts-dejavu-mono (2.37-8) ... 246s Selecting previously unselected package fonts-dejavu-core. 246s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 246s Unpacking fonts-dejavu-core (2.37-8) ... 246s Selecting previously unselected package fontconfig-config. 246s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 246s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 246s Selecting previously unselected package libfontconfig1:s390x. 246s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 246s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 246s Selecting previously unselected package fontconfig. 246s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 246s Unpacking fontconfig (2.15.0-1ubuntu1) ... 246s Selecting previously unselected package fonts-font-awesome. 246s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 246s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 246s Selecting previously unselected package fonts-glyphicons-halflings. 246s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 246s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 246s Selecting previously unselected package fonts-lmodern. 246s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 246s Unpacking fonts-lmodern (2.005-1) ... 246s Selecting previously unselected package fonts-mathjax. 246s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 246s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 247s Selecting previously unselected package libgfortran5:s390x. 247s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 247s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 247s Selecting previously unselected package libgfortran-13-dev:s390x. 247s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 247s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package gfortran-13. 247s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package gfortran-s390x-linux-gnu. 247s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package gfortran. 247s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package icu-devtools. 247s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 247s Unpacking icu-devtools (74.2-1ubuntu1) ... 247s Selecting previously unselected package javascript-common. 247s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 247s Unpacking javascript-common (11+nmu1) ... 247s Selecting previously unselected package libio-string-perl. 247s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 247s Unpacking libio-string-perl (1.08-4) ... 247s Selecting previously unselected package liblatex-tounicode-perl. 247s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 247s Unpacking liblatex-tounicode-perl (0.54-2) ... 247s Selecting previously unselected package libbibtex-parser-perl. 247s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 247s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 247s Selecting previously unselected package libblas3:s390x. 247s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 247s Unpacking libblas3:s390x (3.12.0-3) ... 247s Selecting previously unselected package libblas-dev:s390x. 247s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 247s Unpacking libblas-dev:s390x (3.12.0-3) ... 247s Selecting previously unselected package libboost1.83-dev:s390x. 247s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 247s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 249s Selecting previously unselected package libboost-dev:s390x. 249s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 249s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 249s Selecting previously unselected package libbz2-dev:s390x. 249s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 249s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 249s Selecting previously unselected package libpixman-1-0:s390x. 249s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 249s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 249s Selecting previously unselected package libxcb-render0:s390x. 249s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 249s Unpacking libxcb-render0:s390x (1.15-1) ... 249s Selecting previously unselected package libxcb-shm0:s390x. 249s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 249s Unpacking libxcb-shm0:s390x (1.15-1) ... 249s Selecting previously unselected package libxrender1:s390x. 249s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 249s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 249s Selecting previously unselected package libcairo2:s390x. 249s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 249s Unpacking libcairo2:s390x (1.18.0-1) ... 249s Selecting previously unselected package libdatrie1:s390x. 249s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 249s Unpacking libdatrie1:s390x (0.2.13-3) ... 250s Selecting previously unselected package libdeflate0:s390x. 250s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 250s Unpacking libdeflate0:s390x (1.19-1) ... 250s Selecting previously unselected package libgraphite2-3:s390x. 250s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 250s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 250s Selecting previously unselected package libharfbuzz0b:s390x. 250s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 250s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 250s Selecting previously unselected package x11-common. 250s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 250s Unpacking x11-common (1:7.7+23ubuntu2) ... 250s Selecting previously unselected package libice6:s390x. 250s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 250s Unpacking libice6:s390x (2:1.0.10-1build2) ... 250s Selecting previously unselected package libicu-dev:s390x. 250s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 250s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 250s Selecting previously unselected package libjpeg-turbo8:s390x. 250s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 250s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 250s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 250s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 250s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 250s Selecting previously unselected package libjpeg8:s390x. 250s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 250s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 250s Selecting previously unselected package libjpeg8-dev:s390x. 250s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 250s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 250s Selecting previously unselected package libjpeg-dev:s390x. 250s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 250s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 250s Selecting previously unselected package libjs-bootstrap. 250s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 250s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 250s Selecting previously unselected package libjs-popper.js. 250s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 250s Unpacking libjs-popper.js (1.16.1+ds-6) ... 250s Selecting previously unselected package libjs-bootstrap4. 250s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 250s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 250s Selecting previously unselected package libjs-d3. 250s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 250s Unpacking libjs-d3 (3.5.17-4) ... 250s Selecting previously unselected package libjs-es5-shim. 250s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 250s Unpacking libjs-es5-shim (4.6.7-2) ... 250s Selecting previously unselected package libjs-highlight.js. 250s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 250s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 250s Selecting previously unselected package libjs-jquery. 250s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 250s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 250s Selecting previously unselected package libjs-jquery-datatables. 250s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 250s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 250s Selecting previously unselected package libjs-sifter.js. 250s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 250s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 250s Selecting previously unselected package libjs-microplugin.js. 250s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 250s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 250s Selecting previously unselected package libjs-jquery-selectize.js. 250s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 250s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 250s Selecting previously unselected package libjs-jquery-ui. 250s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 250s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 250s Selecting previously unselected package libjs-json. 250s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 250s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 250s Selecting previously unselected package libjs-lunr. 250s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 250s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 250s Selecting previously unselected package libjs-prettify. 250s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 250s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 251s Selecting previously unselected package libkpathsea6:s390x. 251s Preparing to unpack .../090-libkpathsea6_2023.20230311.66589-9_s390x.deb ... 251s Unpacking libkpathsea6:s390x (2023.20230311.66589-9) ... 251s Selecting previously unselected package liblapack3:s390x. 251s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 251s Unpacking liblapack3:s390x (3.12.0-3) ... 251s Selecting previously unselected package liblapack-dev:s390x. 251s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 251s Unpacking liblapack-dev:s390x (3.12.0-3) ... 251s Selecting previously unselected package liblua5.4-0:s390x. 251s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 251s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 251s Selecting previously unselected package libncurses-dev:s390x. 251s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 251s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 251s Selecting previously unselected package libthai-data. 251s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 251s Unpacking libthai-data (0.1.29-2) ... 251s Selecting previously unselected package libthai0:s390x. 251s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 251s Unpacking libthai0:s390x (0.1.29-2) ... 251s Selecting previously unselected package libpango-1.0-0:s390x. 251s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 251s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 251s Selecting previously unselected package libpangoft2-1.0-0:s390x. 251s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 251s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 251s Selecting previously unselected package libpangocairo-1.0-0:s390x. 251s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 251s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 251s Selecting previously unselected package libpaper1:s390x. 251s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 251s Unpacking libpaper1:s390x (1.1.29) ... 251s Selecting previously unselected package libpaper-utils. 251s Preparing to unpack .../101-libpaper-utils_1.1.29_s390x.deb ... 251s Unpacking libpaper-utils (1.1.29) ... 251s Selecting previously unselected package libpcre2-16-0:s390x. 251s Preparing to unpack .../102-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 251s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 251s Selecting previously unselected package libpcre2-32-0:s390x. 251s Preparing to unpack .../103-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 251s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 251s Selecting previously unselected package libpcre2-posix3:s390x. 251s Preparing to unpack .../104-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 251s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 251s Selecting previously unselected package libpcre2-dev:s390x. 251s Preparing to unpack .../105-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 251s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 251s Selecting previously unselected package libpkgconf3:s390x. 251s Preparing to unpack .../106-libpkgconf3_1.8.1-2_s390x.deb ... 251s Unpacking libpkgconf3:s390x (1.8.1-2) ... 251s Selecting previously unselected package zlib1g-dev:s390x. 251s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 251s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 251s Selecting previously unselected package libpng-dev:s390x. 251s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 251s Unpacking libpng-dev:s390x (1.6.43-1) ... 251s Selecting previously unselected package libpotrace0:s390x. 251s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 251s Unpacking libpotrace0:s390x (1.16-2) ... 251s Selecting previously unselected package libptexenc1:s390x. 251s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 251s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 251s Selecting previously unselected package libreadline-dev:s390x. 251s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 251s Unpacking libreadline-dev:s390x (8.2-3) ... 251s Selecting previously unselected package libsharpyuv0:s390x. 251s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 251s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 251s Selecting previously unselected package libsm6:s390x. 251s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 251s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 251s Selecting previously unselected package libsynctex2:s390x. 251s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 251s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 251s Selecting previously unselected package libtcl8.6:s390x. 251s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 251s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 251s Selecting previously unselected package libteckit0:s390x. 251s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 251s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 251s Selecting previously unselected package libtexlua53-5:s390x. 251s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 251s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 251s Selecting previously unselected package libjbig0:s390x. 251s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 251s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 251s Selecting previously unselected package libwebp7:s390x. 251s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 251s Unpacking libwebp7:s390x (1.3.2-0.4) ... 251s Selecting previously unselected package libtiff6:s390x. 251s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 251s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 251s Selecting previously unselected package libxft2:s390x. 251s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 251s Unpacking libxft2:s390x (2.3.6-1) ... 251s Selecting previously unselected package libxss1:s390x. 251s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 251s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 251s Selecting previously unselected package libtk8.6:s390x. 251s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 251s Unpacking libtk8.6:s390x (8.6.13-2) ... 251s Selecting previously unselected package libxt6:s390x. 251s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 251s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 251s Selecting previously unselected package libxmu6:s390x. 251s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 251s Unpacking libxmu6:s390x (2:1.1.3-3) ... 251s Selecting previously unselected package libxpm4:s390x. 251s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 251s Unpacking libxpm4:s390x (1:3.5.17-1) ... 251s Selecting previously unselected package libxaw7:s390x. 251s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 251s Unpacking libxaw7:s390x (2:1.0.14-1) ... 251s Selecting previously unselected package libxi6:s390x. 252s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 252s Unpacking libxi6:s390x (2:1.8.1-1) ... 252s Selecting previously unselected package libzzip-0-13:s390x. 252s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 252s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 252s Selecting previously unselected package zip. 252s Preparing to unpack .../130-zip_3.0-13_s390x.deb ... 252s Unpacking zip (3.0-13) ... 252s Selecting previously unselected package unzip. 252s Preparing to unpack .../131-unzip_6.0-28ubuntu3_s390x.deb ... 252s Unpacking unzip (6.0-28ubuntu3) ... 252s Selecting previously unselected package xdg-utils. 252s Preparing to unpack .../132-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 252s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 252s Selecting previously unselected package r-base-core. 252s Preparing to unpack .../133-r-base-core_4.3.2-1build1_s390x.deb ... 252s Unpacking r-base-core (4.3.2-1build1) ... 252s Selecting previously unselected package r-cran-littler. 252s Preparing to unpack .../134-r-cran-littler_0.3.19-1_s390x.deb ... 252s Unpacking r-cran-littler (0.3.19-1) ... 252s Selecting previously unselected package littler. 252s Preparing to unpack .../135-littler_0.3.19-1_all.deb ... 252s Unpacking littler (0.3.19-1) ... 252s Selecting previously unselected package node-bootstrap-sass. 252s Preparing to unpack .../136-node-bootstrap-sass_3.4.3-2_all.deb ... 252s Unpacking node-bootstrap-sass (3.4.3-2) ... 252s Selecting previously unselected package node-html5shiv. 252s Preparing to unpack .../137-node-html5shiv_3.7.3+dfsg-5_all.deb ... 252s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 252s Selecting previously unselected package node-normalize.css. 252s Preparing to unpack .../138-node-normalize.css_8.0.1-5_all.deb ... 252s Unpacking node-normalize.css (8.0.1-5) ... 252s Selecting previously unselected package pandoc-data. 252s Preparing to unpack .../139-pandoc-data_3.1.3-1_all.deb ... 252s Unpacking pandoc-data (3.1.3-1) ... 252s Selecting previously unselected package pandoc. 252s Preparing to unpack .../140-pandoc_3.1.3+ds-2_s390x.deb ... 252s Unpacking pandoc (3.1.3+ds-2) ... 254s Selecting previously unselected package pkgconf-bin. 254s Preparing to unpack .../141-pkgconf-bin_1.8.1-2_s390x.deb ... 254s Unpacking pkgconf-bin (1.8.1-2) ... 254s Selecting previously unselected package pkgconf:s390x. 254s Preparing to unpack .../142-pkgconf_1.8.1-2_s390x.deb ... 254s Unpacking pkgconf:s390x (1.8.1-2) ... 254s Selecting previously unselected package pkg-config:s390x. 254s Preparing to unpack .../143-pkg-config_1.8.1-2_s390x.deb ... 254s Unpacking pkg-config:s390x (1.8.1-2) ... 254s Selecting previously unselected package liblzma-dev:s390x. 254s Preparing to unpack .../144-liblzma-dev_5.4.5-0.3_s390x.deb ... 254s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 254s Selecting previously unselected package r-base-dev. 254s Preparing to unpack .../145-r-base-dev_4.3.2-1build1_all.deb ... 254s Unpacking r-base-dev (4.3.2-1build1) ... 254s Selecting previously unselected package pkg-r-autopkgtest. 254s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 254s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 254s Selecting previously unselected package r-bioc-biocgenerics. 254s Preparing to unpack .../147-r-bioc-biocgenerics_0.48.1-2_all.deb ... 254s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 254s Selecting previously unselected package r-bioc-biobase. 254s Preparing to unpack .../148-r-bioc-biobase_2.62.0-1_s390x.deb ... 254s Unpacking r-bioc-biobase (2.62.0-1) ... 254s Selecting previously unselected package r-bioc-s4vectors. 254s Preparing to unpack .../149-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 254s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 254s Selecting previously unselected package r-bioc-iranges. 254s Preparing to unpack .../150-r-bioc-iranges_2.36.0-1_s390x.deb ... 254s Unpacking r-bioc-iranges (2.36.0-1) ... 254s Selecting previously unselected package r-cran-dbi. 254s Preparing to unpack .../151-r-cran-dbi_1.2.2-1_all.deb ... 254s Unpacking r-cran-dbi (1.2.2-1) ... 254s Selecting previously unselected package r-cran-bit. 254s Preparing to unpack .../152-r-cran-bit_4.0.5-1_s390x.deb ... 254s Unpacking r-cran-bit (4.0.5-1) ... 254s Selecting previously unselected package r-cran-bit64. 254s Preparing to unpack .../153-r-cran-bit64_4.0.5-1_s390x.deb ... 254s Unpacking r-cran-bit64 (4.0.5-1) ... 254s Selecting previously unselected package r-cran-rlang. 254s Preparing to unpack .../154-r-cran-rlang_1.1.3-1_s390x.deb ... 254s Unpacking r-cran-rlang (1.1.3-1) ... 254s Selecting previously unselected package r-cran-cli. 254s Preparing to unpack .../155-r-cran-cli_3.6.2-1_s390x.deb ... 254s Unpacking r-cran-cli (3.6.2-1) ... 254s Selecting previously unselected package r-cran-glue. 254s Preparing to unpack .../156-r-cran-glue_1.7.0-1_s390x.deb ... 254s Unpacking r-cran-glue (1.7.0-1) ... 254s Selecting previously unselected package r-cran-lifecycle. 254s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 254s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 254s Selecting previously unselected package r-cran-vctrs. 254s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_s390x.deb ... 254s Unpacking r-cran-vctrs (0.6.5-1) ... 254s Selecting previously unselected package r-cran-blob. 254s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 254s Unpacking r-cran-blob (1.2.4-1) ... 254s Selecting previously unselected package r-cran-fastmap. 254s Preparing to unpack .../160-r-cran-fastmap_1.1.1-1_s390x.deb ... 254s Unpacking r-cran-fastmap (1.1.1-1) ... 254s Selecting previously unselected package r-cran-cachem. 254s Preparing to unpack .../161-r-cran-cachem_1.0.8-1_s390x.deb ... 254s Unpacking r-cran-cachem (1.0.8-1) ... 254s Selecting previously unselected package r-cran-memoise. 254s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 254s Unpacking r-cran-memoise (2.0.1-1) ... 254s Selecting previously unselected package r-cran-pkgconfig. 254s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 254s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 254s Selecting previously unselected package r-cran-plogr. 254s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 254s Unpacking r-cran-plogr (0.2.0-3build1) ... 254s Selecting previously unselected package r-cran-cpp11. 254s Preparing to unpack .../165-r-cran-cpp11_0.4.7-1_all.deb ... 254s Unpacking r-cran-cpp11 (0.4.7-1) ... 254s Selecting previously unselected package r-cran-rsqlite. 254s Preparing to unpack .../166-r-cran-rsqlite_2.3.4-1_s390x.deb ... 254s Unpacking r-cran-rsqlite (2.3.4-1) ... 254s Selecting previously unselected package r-cran-curl. 254s Preparing to unpack .../167-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 254s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 254s Selecting previously unselected package r-cran-jsonlite. 254s Preparing to unpack .../168-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 254s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 254s Selecting previously unselected package r-cran-mime. 254s Preparing to unpack .../169-r-cran-mime_0.12-1_s390x.deb ... 254s Unpacking r-cran-mime (0.12-1) ... 255s Selecting previously unselected package r-cran-sys. 255s Preparing to unpack .../170-r-cran-sys_3.4.2-1_s390x.deb ... 255s Unpacking r-cran-sys (3.4.2-1) ... 255s Selecting previously unselected package r-cran-askpass. 255s Preparing to unpack .../171-r-cran-askpass_1.2.0-1_s390x.deb ... 255s Unpacking r-cran-askpass (1.2.0-1) ... 255s Selecting previously unselected package r-cran-openssl. 255s Preparing to unpack .../172-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 255s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 255s Selecting previously unselected package r-cran-r6. 255s Preparing to unpack .../173-r-cran-r6_2.5.1-1_all.deb ... 255s Unpacking r-cran-r6 (2.5.1-1) ... 255s Selecting previously unselected package r-cran-httr. 255s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 255s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 255s Selecting previously unselected package r-cran-png. 255s Preparing to unpack .../175-r-cran-png_0.1-8-1_s390x.deb ... 255s Unpacking r-cran-png (0.1-8-1) ... 255s Selecting previously unselected package r-bioc-zlibbioc. 255s Preparing to unpack .../176-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 255s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 255s Selecting previously unselected package r-bioc-xvector. 255s Preparing to unpack .../177-r-bioc-xvector_0.42.0-1_s390x.deb ... 255s Unpacking r-bioc-xvector (0.42.0-1) ... 255s Selecting previously unselected package r-cran-bitops. 255s Preparing to unpack .../178-r-cran-bitops_1.0-7-1_s390x.deb ... 255s Unpacking r-cran-bitops (1.0-7-1) ... 255s Selecting previously unselected package r-cran-rcurl. 255s Preparing to unpack .../179-r-cran-rcurl_1.98-1.14+dfsg-1_s390x.deb ... 255s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 255s Selecting previously unselected package r-bioc-genomeinfodbdata. 255s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 255s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 255s Selecting previously unselected package r-bioc-genomeinfodb. 255s Preparing to unpack .../181-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 255s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 255s Selecting previously unselected package r-cran-crayon. 255s Preparing to unpack .../182-r-cran-crayon_1.5.2-1_all.deb ... 255s Unpacking r-cran-crayon (1.5.2-1) ... 255s Selecting previously unselected package r-bioc-biostrings. 255s Preparing to unpack .../183-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 255s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 255s Selecting previously unselected package r-bioc-keggrest. 255s Preparing to unpack .../184-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 255s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 255s Selecting previously unselected package r-bioc-annotationdbi. 255s Preparing to unpack .../185-r-bioc-annotationdbi_1.64.1-1_all.deb ... 255s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 255s Selecting previously unselected package r-cran-generics. 255s Preparing to unpack .../186-r-cran-generics_0.1.3-1_all.deb ... 255s Unpacking r-cran-generics (0.1.3-1) ... 255s Selecting previously unselected package r-cran-magrittr. 255s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_s390x.deb ... 255s Unpacking r-cran-magrittr (2.0.3-1) ... 255s Selecting previously unselected package r-cran-fansi. 255s Preparing to unpack .../188-r-cran-fansi_1.0.5-1_s390x.deb ... 255s Unpacking r-cran-fansi (1.0.5-1) ... 255s Selecting previously unselected package r-cran-utf8. 255s Preparing to unpack .../189-r-cran-utf8_1.2.4-1_s390x.deb ... 255s Unpacking r-cran-utf8 (1.2.4-1) ... 255s Selecting previously unselected package r-cran-pillar. 255s Preparing to unpack .../190-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 255s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 255s Selecting previously unselected package r-cran-tibble. 255s Preparing to unpack .../191-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 255s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 255s Selecting previously unselected package r-cran-withr. 255s Preparing to unpack .../192-r-cran-withr_2.5.0-1_all.deb ... 255s Unpacking r-cran-withr (2.5.0-1) ... 255s Selecting previously unselected package r-cran-tidyselect. 255s Preparing to unpack .../193-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 255s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 255s Selecting previously unselected package r-cran-dplyr. 255s Preparing to unpack .../194-r-cran-dplyr_1.1.4-1_s390x.deb ... 255s Unpacking r-cran-dplyr (1.1.4-1) ... 255s Selecting previously unselected package r-cran-purrr. 255s Preparing to unpack .../195-r-cran-purrr_1.0.2-1_s390x.deb ... 255s Unpacking r-cran-purrr (1.0.2-1) ... 255s Selecting previously unselected package r-cran-stringi. 255s Preparing to unpack .../196-r-cran-stringi_1.8.3-1_s390x.deb ... 255s Unpacking r-cran-stringi (1.8.3-1) ... 255s Selecting previously unselected package r-cran-stringr. 255s Preparing to unpack .../197-r-cran-stringr_1.5.1-1_all.deb ... 255s Unpacking r-cran-stringr (1.5.1-1) ... 255s Selecting previously unselected package r-cran-tidyr. 255s Preparing to unpack .../198-r-cran-tidyr_1.3.1-1_s390x.deb ... 255s Unpacking r-cran-tidyr (1.3.1-1) ... 256s Selecting previously unselected package r-cran-dbplyr. 256s Preparing to unpack .../199-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 256s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 256s Selecting previously unselected package r-cran-filelock. 256s Preparing to unpack .../200-r-cran-filelock_1.0.3-1_s390x.deb ... 256s Unpacking r-cran-filelock (1.0.3-1) ... 256s Selecting previously unselected package r-bioc-biocfilecache. 256s Preparing to unpack .../201-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 256s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 256s Selecting previously unselected package r-bioc-biocio. 256s Preparing to unpack .../202-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 256s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 256s Selecting previously unselected package r-cran-formatr. 256s Preparing to unpack .../203-r-cran-formatr_1.14-1_all.deb ... 256s Unpacking r-cran-formatr (1.14-1) ... 256s Selecting previously unselected package r-cran-lambda.r. 256s Preparing to unpack .../204-r-cran-lambda.r_1.2.4-2build1_all.deb ... 256s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 256s Selecting previously unselected package r-cran-futile.options. 256s Preparing to unpack .../205-r-cran-futile.options_1.0.1-3build1_all.deb ... 256s Unpacking r-cran-futile.options (1.0.1-3build1) ... 256s Selecting previously unselected package r-cran-futile.logger. 256s Preparing to unpack .../206-r-cran-futile.logger_1.4.3-4build1_all.deb ... 256s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 256s Selecting previously unselected package r-cran-snow. 256s Preparing to unpack .../207-r-cran-snow_1%3a0.4.4-2_all.deb ... 256s Unpacking r-cran-snow (1:0.4.4-2) ... 256s Selecting previously unselected package r-cran-codetools. 256s Preparing to unpack .../208-r-cran-codetools_0.2-19-1_all.deb ... 256s Unpacking r-cran-codetools (0.2-19-1) ... 256s Selecting previously unselected package r-cran-bh. 256s Preparing to unpack .../209-r-cran-bh_1.84.0-1_all.deb ... 256s Unpacking r-cran-bh (1.84.0-1) ... 256s Selecting previously unselected package r-bioc-biocparallel. 256s Preparing to unpack .../210-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 256s Unpacking r-bioc-biocparallel (1.36.0-1) ... 256s Selecting previously unselected package r-cran-base64enc. 256s Preparing to unpack .../211-r-cran-base64enc_0.1-3-3_s390x.deb ... 256s Unpacking r-cran-base64enc (0.1-3-3) ... 256s Selecting previously unselected package r-cran-digest. 256s Preparing to unpack .../212-r-cran-digest_0.6.34-1_s390x.deb ... 256s Unpacking r-cran-digest (0.6.34-1) ... 256s Selecting previously unselected package r-cran-ellipsis. 256s Preparing to unpack .../213-r-cran-ellipsis_0.3.2-2_s390x.deb ... 256s Unpacking r-cran-ellipsis (0.3.2-2) ... 256s Selecting previously unselected package r-cran-htmltools. 256s Preparing to unpack .../214-r-cran-htmltools_0.5.7-1_s390x.deb ... 256s Unpacking r-cran-htmltools (0.5.7-1) ... 256s Selecting previously unselected package r-cran-evaluate. 256s Preparing to unpack .../215-r-cran-evaluate_0.23-1_all.deb ... 256s Unpacking r-cran-evaluate (0.23-1) ... 256s Selecting previously unselected package r-cran-xfun. 256s Preparing to unpack .../216-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 256s Unpacking r-cran-xfun (0.41+dfsg-1) ... 256s Selecting previously unselected package r-cran-highr. 256s Preparing to unpack .../217-r-cran-highr_0.10+dfsg-1_all.deb ... 256s Unpacking r-cran-highr (0.10+dfsg-1) ... 256s Selecting previously unselected package r-cran-yaml. 256s Preparing to unpack .../218-r-cran-yaml_2.3.8-1_s390x.deb ... 256s Unpacking r-cran-yaml (2.3.8-1) ... 256s Selecting previously unselected package libjs-mathjax. 256s Preparing to unpack .../219-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 256s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 257s Selecting previously unselected package r-cran-knitr. 257s Preparing to unpack .../220-r-cran-knitr_1.45+dfsg-1_all.deb ... 257s Unpacking r-cran-knitr (1.45+dfsg-1) ... 257s Selecting previously unselected package r-cran-jquerylib. 257s Preparing to unpack .../221-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 257s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 257s Selecting previously unselected package r-cran-fs. 257s Preparing to unpack .../222-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 257s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 257s Selecting previously unselected package r-cran-rappdirs. 257s Preparing to unpack .../223-r-cran-rappdirs_0.3.3-1_s390x.deb ... 257s Unpacking r-cran-rappdirs (0.3.3-1) ... 257s Selecting previously unselected package r-cran-sass. 257s Preparing to unpack .../224-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 257s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 257s Selecting previously unselected package r-cran-bslib. 257s Preparing to unpack .../225-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 257s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 257s Selecting previously unselected package r-cran-fontawesome. 257s Preparing to unpack .../226-r-cran-fontawesome_0.5.2-1_all.deb ... 257s Unpacking r-cran-fontawesome (0.5.2-1) ... 257s Selecting previously unselected package r-cran-tinytex. 257s Preparing to unpack .../227-r-cran-tinytex_0.49-1_all.deb ... 257s Unpacking r-cran-tinytex (0.49-1) ... 257s Selecting previously unselected package libjs-modernizr. 257s Preparing to unpack .../228-libjs-modernizr_2.6.2+ds1-5_all.deb ... 257s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 257s Selecting previously unselected package r-cran-pkgkitten. 257s Preparing to unpack .../229-r-cran-pkgkitten_0.2.3-1_all.deb ... 257s Unpacking r-cran-pkgkitten (0.2.3-1) ... 257s Selecting previously unselected package r-cran-rcpp. 257s Preparing to unpack .../230-r-cran-rcpp_1.0.12-1_s390x.deb ... 257s Unpacking r-cran-rcpp (1.0.12-1) ... 258s Selecting previously unselected package r-cran-later. 258s Preparing to unpack .../231-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 258s Unpacking r-cran-later (1.3.2+dfsg-1) ... 258s Selecting previously unselected package r-cran-promises. 258s Preparing to unpack .../232-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 258s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 258s Selecting previously unselected package r-cran-httpuv. 258s Preparing to unpack .../233-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 258s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 258s Selecting previously unselected package r-cran-xtable. 258s Preparing to unpack .../234-r-cran-xtable_1%3a1.8-4-2_all.deb ... 258s Unpacking r-cran-xtable (1:1.8-4-2) ... 258s Selecting previously unselected package r-cran-sourcetools. 258s Preparing to unpack .../235-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 258s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 258s Selecting previously unselected package r-cran-commonmark. 258s Preparing to unpack .../236-r-cran-commonmark_1.9.1-1_s390x.deb ... 258s Unpacking r-cran-commonmark (1.9.1-1) ... 258s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 258s Preparing to unpack .../237-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 258s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 258s Selecting previously unselected package r-cran-shiny. 258s Preparing to unpack .../238-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 258s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 258s Selecting previously unselected package r-cran-rmarkdown. 258s Preparing to unpack .../239-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 258s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 258s Selecting previously unselected package r-cran-bookdown. 258s Preparing to unpack .../240-r-cran-bookdown_0.37+dfsg-1_all.deb ... 258s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 258s Selecting previously unselected package r-cran-biocmanager. 258s Preparing to unpack .../241-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 258s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 258s Selecting previously unselected package tex-common. 258s Preparing to unpack .../242-tex-common_6.18_all.deb ... 258s Unpacking tex-common (6.18) ... 258s Selecting previously unselected package t1utils. 258s Preparing to unpack .../243-t1utils_1.41-4build2_s390x.deb ... 258s Unpacking t1utils (1.41-4build2) ... 258s Selecting previously unselected package texlive-binaries. 258s Preparing to unpack .../244-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 258s Unpacking texlive-binaries (2023.20230311.66589-9) ... 258s Selecting previously unselected package texlive-base. 258s Preparing to unpack .../245-texlive-base_2023.20240207-1_all.deb ... 258s Unpacking texlive-base (2023.20240207-1) ... 261s Selecting previously unselected package texlive-latex-base. 261s Preparing to unpack .../246-texlive-latex-base_2023.20240207-1_all.deb ... 261s Unpacking texlive-latex-base (2023.20240207-1) ... 261s Selecting previously unselected package texlive-bibtex-extra. 261s Preparing to unpack .../247-texlive-bibtex-extra_2023.20240207-1_all.deb ... 261s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 268s Selecting previously unselected package r-bioc-biocstyle. 268s Preparing to unpack .../248-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 268s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 268s Selecting previously unselected package r-cran-xml. 268s Preparing to unpack .../249-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 268s Unpacking r-cran-xml (3.99-0.16.1-1) ... 268s Selecting previously unselected package r-cran-hms. 268s Preparing to unpack .../250-r-cran-hms_1.1.3-1_all.deb ... 268s Unpacking r-cran-hms (1.1.3-1) ... 268s Selecting previously unselected package r-cran-prettyunits. 268s Preparing to unpack .../251-r-cran-prettyunits_1.2.0-1_all.deb ... 268s Unpacking r-cran-prettyunits (1.2.0-1) ... 268s Selecting previously unselected package r-cran-progress. 268s Preparing to unpack .../252-r-cran-progress_1.2.3-1_all.deb ... 268s Unpacking r-cran-progress (1.2.3-1) ... 268s Selecting previously unselected package r-cran-xml2. 268s Preparing to unpack .../253-r-cran-xml2_1.3.6-1_s390x.deb ... 268s Unpacking r-cran-xml2 (1.3.6-1) ... 268s Selecting previously unselected package r-bioc-biomart. 268s Preparing to unpack .../254-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 268s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 268s Selecting previously unselected package r-cran-lattice. 268s Preparing to unpack .../255-r-cran-lattice_0.22-5-1_s390x.deb ... 268s Unpacking r-cran-lattice (0.22-5-1) ... 268s Selecting previously unselected package r-cran-matrix. 268s Preparing to unpack .../256-r-cran-matrix_1.6-5-1_s390x.deb ... 268s Unpacking r-cran-matrix (1.6-5-1) ... 269s Selecting previously unselected package r-cran-matrixstats. 269s Preparing to unpack .../257-r-cran-matrixstats_1.2.0-1_s390x.deb ... 269s Unpacking r-cran-matrixstats (1.2.0-1) ... 269s Selecting previously unselected package r-bioc-matrixgenerics. 269s Preparing to unpack .../258-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 269s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 269s Selecting previously unselected package r-cran-abind. 269s Preparing to unpack .../259-r-cran-abind_1.4-5-2_all.deb ... 269s Unpacking r-cran-abind (1.4-5-2) ... 269s Selecting previously unselected package r-bioc-s4arrays. 269s Preparing to unpack .../260-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 269s Selecting previously unselected package r-bioc-sparsearray. 269s Preparing to unpack .../261-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 269s Selecting previously unselected package r-bioc-delayedarray. 269s Preparing to unpack .../262-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 269s Selecting previously unselected package r-bioc-genomicranges. 269s Preparing to unpack .../263-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 269s Selecting previously unselected package r-bioc-summarizedexperiment. 269s Preparing to unpack .../264-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 269s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 269s Selecting previously unselected package r-bioc-rhtslib. 269s Preparing to unpack .../265-r-bioc-rhtslib_2.4.1+dfsg-3build1_s390x.deb ... 269s Unpacking r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 269s Selecting previously unselected package r-bioc-rsamtools. 269s Preparing to unpack .../266-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 269s Selecting previously unselected package r-bioc-genomicalignments. 269s Preparing to unpack .../267-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 269s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 269s Selecting previously unselected package r-cran-rjson. 269s Preparing to unpack .../268-r-cran-rjson_0.2.21-1_s390x.deb ... 269s Unpacking r-cran-rjson (0.2.21-1) ... 269s Selecting previously unselected package r-cran-restfulr. 269s Preparing to unpack .../269-r-cran-restfulr_0.0.15-1_s390x.deb ... 269s Unpacking r-cran-restfulr (0.0.15-1) ... 269s Selecting previously unselected package r-bioc-rtracklayer. 269s Preparing to unpack .../270-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 269s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 269s Selecting previously unselected package r-bioc-genomicfeatures. 269s Preparing to unpack .../271-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 269s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 269s Selecting previously unselected package r-cran-hwriter. 269s Preparing to unpack .../272-r-cran-hwriter_1.3.2.1-1_all.deb ... 269s Unpacking r-cran-hwriter (1.3.2.1-1) ... 269s Selecting previously unselected package r-cran-jpeg. 269s Preparing to unpack .../273-r-cran-jpeg_0.1-10-1_s390x.deb ... 269s Unpacking r-cran-jpeg (0.1-10-1) ... 269s Selecting previously unselected package r-cran-rcolorbrewer. 269s Preparing to unpack .../274-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 269s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 269s Selecting previously unselected package r-cran-deldir. 269s Preparing to unpack .../275-r-cran-deldir_2.0-4-1_s390x.deb ... 269s Unpacking r-cran-deldir (2.0-4-1) ... 269s Selecting previously unselected package r-cran-rcppeigen. 269s Preparing to unpack .../276-r-cran-rcppeigen_0.3.3.9.4-1_s390x.deb ... 269s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 269s Selecting previously unselected package r-cran-interp. 269s Preparing to unpack .../277-r-cran-interp_1.1-6-1_s390x.deb ... 269s Unpacking r-cran-interp (1.1-6-1) ... 269s Selecting previously unselected package r-cran-mass. 269s Preparing to unpack .../278-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 269s Unpacking r-cran-mass (7.3-60.0.1-1) ... 269s Selecting previously unselected package r-cran-latticeextra. 269s Preparing to unpack .../279-r-cran-latticeextra_0.6-30-1_all.deb ... 269s Unpacking r-cran-latticeextra (0.6-30-1) ... 270s Selecting previously unselected package r-bioc-shortread. 270s Preparing to unpack .../280-r-bioc-shortread_1.60.0-2_s390x.deb ... 270s Unpacking r-bioc-shortread (1.60.0-2) ... 270s Selecting previously unselected package r-cran-runit. 270s Preparing to unpack .../281-r-cran-runit_0.4.32-3_all.deb ... 270s Unpacking r-cran-runit (0.4.32-3) ... 270s Selecting previously unselected package autopkgtest-satdep. 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/usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 274s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 274s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 274s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 274s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 274s Setting up r-cran-bitops (1.0-7-1) ... 274s Setting up r-cran-bit64 (4.0.5-1) ... 274s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 274s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 274s Setting up r-cran-deldir (2.0-4-1) ... 274s Setting up r-cran-askpass (1.2.0-1) ... 274s Setting up r-cran-fastmap (1.1.1-1) ... 274s Setting up r-cran-png (0.1-8-1) ... 274s Setting up r-bioc-biobase (2.62.0-1) ... 274s Setting up r-cran-jsonlite 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(1.0.2-1) ... 274s Setting up r-cran-blob (1.2.4-1) ... 274s Setting up r-cran-htmltools (0.5.7-1) ... 274s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 274s Setting up r-bioc-xvector (0.42.0-1) ... 274s Setting up r-cran-sass (0.4.8+dfsg-1) ... 274s Setting up r-cran-dplyr (1.1.4-1) ... 274s Setting up r-cran-rsqlite (2.3.4-1) ... 274s Setting up r-cran-progress (1.2.3-1) ... 274s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 274s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 274s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 274s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 274s Setting up r-cran-fontawesome (0.5.2-1) ... 274s Setting up r-cran-latticeextra (0.6-30-1) ... 274s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 274s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 274s Setting up r-cran-tidyr (1.3.1-1) ... 274s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 274s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 274s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 274s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 274s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 274s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 274s Setting up r-bioc-annotationdbi (1.64.1-1) ... 274s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 274s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 274s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 274s Setting up r-bioc-genomicalignments (1.38.2-1) ... 274s Setting up r-cran-bookdown (0.37+dfsg-1) ... 274s Setting up r-bioc-rtracklayer (1.62.0-1) ... 274s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 274s Setting up r-bioc-shortread (1.60.0-2) ... 274s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 274s Setting up autopkgtest-satdep (0) ... 274s Processing triggers for man-db (2.12.0-3) ... 275s Processing triggers for install-info (7.1-3) ... 275s Processing triggers for libc-bin (2.39-0ubuntu2) ... 275s Processing triggers for tex-common (6.18) ... 276s Running updmap-sys. This may take some time... done. 276s Running mktexlsr /var/lib/texmf ... done. 276s Building format(s) --all. 320s This may take some time... done. 327s (Reading database ... 102326 files and directories currently installed.) 327s Removing autopkgtest-satdep (0) ... 328s autopkgtest [18:26:48]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 328s autopkgtest [18:26:48]: test pkg-r-autopkgtest: [----------------------- 328s Test: Try to load the R library Rsamtools 328s 328s R version 4.3.2 (2023-10-31) -- "Eye Holes" 328s Copyright (C) 2023 The R Foundation for Statistical Computing 328s Platform: s390x-ibm-linux-gnu (64-bit) 328s 328s R is free software and comes with ABSOLUTELY NO WARRANTY. 328s You are welcome to redistribute it under certain conditions. 328s Type 'license()' or 'licence()' for distribution details. 328s 328s R is a collaborative project with many contributors. 328s Type 'contributors()' for more information and 328s 'citation()' on how to cite R or R packages in publications. 328s 328s Type 'demo()' for some demos, 'help()' for on-line help, or 328s 'help.start()' for an HTML browser interface to help. 328s Type 'q()' to quit R. 328s 328s > library('Rsamtools') 328s Loading required package: GenomeInfoDb 328s Loading required package: BiocGenerics 328s 328s Attaching package: ‘BiocGenerics’ 328s 328s The following objects are masked from ‘package:stats’: 328s 328s IQR, mad, sd, var, xtabs 328s 328s The following objects are masked from ‘package:base’: 328s 328s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 328s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 328s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 328s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 328s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 328s table, tapply, union, unique, unsplit, which.max, which.min 328s 328s Loading required package: S4Vectors 328s Loading required package: stats4 329s 329s Attaching package: ‘S4Vectors’ 329s 329s The following object is masked from ‘package:utils’: 329s 329s findMatches 329s 329s The following objects are masked from ‘package:base’: 329s 329s expand.grid, I, unname 329s 329s Loading required package: IRanges 330s Loading required package: GenomicRanges 330s Loading required package: Biostrings 330s Loading required package: XVector 331s 331s Attaching package: ‘Biostrings’ 331s 331s The following object is masked from ‘package:base’: 331s 331s strsplit 331s 331s > 331s > 331s Other tests are currently unsupported! 331s They will be progressively added. 332s autopkgtest [18:26:52]: test pkg-r-autopkgtest: -----------------------] 332s pkg-r-autopkgtest PASS 332s autopkgtest [18:26:52]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 332s autopkgtest [18:26:52]: @@@@@@@@@@@@@@@@@@@@ summary 332s pkg-r-autopkgtest PASS 356s Creating nova instance adt-noble-s390x-r-bioc-rsamtools-20240316-182120-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...