0s autopkgtest [18:16:38]: starting date and time: 2024-03-16 18:16:38+0000 0s autopkgtest [18:16:38]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:16:38]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nojphrm4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rhtslib,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-rhtslib --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rhtslib/2.4.1+dfsg-3build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-9.secgroup --name adt-noble-s390x-r-bioc-rhtslib-20240316-181637-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 199s autopkgtest [18:19:57]: testbed dpkg architecture: s390x 199s autopkgtest [18:19:57]: testbed apt version: 2.7.12 199s autopkgtest [18:19:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 200s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 200s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 201s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 201s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 201s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 201s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 201s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 201s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 201s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 201s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 201s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 201s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 201s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 203s Fetched 8760 kB in 2s (3716 kB/s) 203s Reading package lists... 206s Reading package lists... 206s Building dependency tree... 206s Reading state information... 206s Calculating upgrade... 206s The following packages will be REMOVED: 206s libssl3 206s The following NEW packages will be installed: 206s libssl3t64 206s The following packages have been kept back: 206s curl 206s The following packages will be upgraded: 206s openssl ubuntu-minimal ubuntu-standard 207s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 207s Need to get 2680 kB of archives. 207s After this operation, 23.6 kB of additional disk space will be used. 207s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 207s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 207s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 207s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 207s Fetched 2680 kB in 1s (3671 kB/s) 207s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 207s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 207s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 208s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 208s wget depends on libssl3 (>= 3.0.0). 208s tnftp depends on libssl3 (>= 3.0.0). 208s tcpdump depends on libssl3 (>= 3.0.0). 208s systemd-resolved depends on libssl3 (>= 3.0.0). 208s systemd depends on libssl3 (>= 3.0.0). 208s sudo depends on libssl3 (>= 3.0.0). 208s s390-tools depends on libssl3 (>= 3.0.0). 208s rsync depends on libssl3 (>= 3.0.0). 208s python3-cryptography depends on libssl3 (>= 3.0.0). 208s openssh-server depends on libssl3 (>= 3.0.10). 208s openssh-client depends on libssl3 (>= 3.0.10). 208s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 208s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 208s libssh-4:s390x depends on libssl3 (>= 3.0.0). 208s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 208s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 208s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 208s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 208s libnvme1 depends on libssl3 (>= 3.0.0). 208s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 208s libkmod2:s390x depends on libssl3 (>= 3.0.0). 208s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 208s libcurl4:s390x depends on libssl3 (>= 3.0.0). 208s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 208s kmod depends on libssl3 (>= 3.0.0). 208s dhcpcd-base depends on libssl3 (>= 3.0.0). 208s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 208s 208s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 208s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 208s Selecting previously unselected package libssl3t64:s390x. 208s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 208s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 208s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 208s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 208s Unpacking ubuntu-minimal (1.536) over (1.535) ... 208s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 208s Unpacking ubuntu-standard (1.536) over (1.535) ... 208s Setting up ubuntu-minimal (1.536) ... 208s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 208s Setting up ubuntu-standard (1.536) ... 208s Setting up openssl (3.0.13-0ubuntu1) ... 208s Processing triggers for man-db (2.12.0-3) ... 208s Processing triggers for libc-bin (2.39-0ubuntu2) ... 208s Reading package lists... 209s Building dependency tree... 209s Reading state information... 209s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 209s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 209s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 209s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 209s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 210s Reading package lists... 210s Reading package lists... 211s Building dependency tree... 211s Reading state information... 211s Calculating upgrade... 211s The following packages have been kept back: 211s curl 211s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 211s Reading package lists... 211s Building dependency tree... 211s Reading state information... 211s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 214s autopkgtest [18:20:12]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 214s autopkgtest [18:20:12]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rhtslib 216s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/universe r-bioc-rhtslib 2.4.1+dfsg-3build1 (dsc) [2269 B] 216s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe r-bioc-rhtslib 2.4.1+dfsg-3build1 (tar) [3787 kB] 216s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe r-bioc-rhtslib 2.4.1+dfsg-3build1 (diff) [4508 B] 216s gpgv: Signature made Sat Mar 16 06:57:34 2024 UTC 216s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D 216s gpgv: issuer "steve.langasek@ubuntu.com" 216s gpgv: Can't check signature: No public key 216s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rhtslib_2.4.1+dfsg-3build1.dsc: no acceptable signature found 216s autopkgtest [18:20:14]: testing package r-bioc-rhtslib version 2.4.1+dfsg-3build1 217s autopkgtest [18:20:15]: build not needed 218s autopkgtest [18:20:16]: test pkg-r-autopkgtest: preparing testbed 220s Reading package lists... 220s Building dependency tree... 220s Reading state information... 220s Starting pkgProblemResolver with broken count: 0 220s Starting 2 pkgProblemResolver with broken count: 0 220s Done 221s The following additional packages will be installed: 221s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 221s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 221s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 221s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 221s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 221s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 221s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 221s libblas3 libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 221s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 221s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 221s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 221s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 221s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 221s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 221s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 221s libjs-popper.js libjs-prettify libjs-sifter.js 221s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 221s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 221s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 221s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 221s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 221s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 221s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 221s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 221s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 221s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 221s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 221s r-base-core r-base-dev r-bioc-biocgenerics r-bioc-biocstyle r-bioc-rhtslib 221s r-bioc-zlibbioc r-cran-base64enc r-cran-biocmanager r-cran-bookdown 221s r-cran-bslib r-cran-cachem r-cran-cli r-cran-commonmark r-cran-crayon 221s r-cran-digest r-cran-ellipsis r-cran-evaluate r-cran-fastmap 221s r-cran-fontawesome r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools 221s r-cran-httpuv r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 221s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise r-cran-mime 221s r-cran-pkgkitten r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp 221s r-cran-rlang r-cran-rmarkdown r-cran-sass r-cran-shiny r-cran-sourcetools 221s r-cran-stringi r-cran-stringr r-cran-tinytex r-cran-vctrs r-cran-withr 221s r-cran-xfun r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 221s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 221s x11-common xdg-utils zip zlib1g-dev 221s Suggested packages: 221s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 221s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 221s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 221s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 221s | lighttpd | httpd liblapack-doc glibc-doc icu-doc libjs-jquery-ui-docs 221s fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc 221s readline-doc libstdc++-13-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended 221s texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context 221s wkhtmltopdf librsvg2-bin groff ghc php python ruby libjs-katex 221s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 221s r-base-html texlive-plain-generic texlive-fonts-recommended 221s texlive-fonts-extra texlive-extra-utils texinfo r-bioc-biobase 221s r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray 221s r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy 221s r-bioc-deseq2 r-bioc-annotate r-cran-runit r-cran-rstudioapi r-cran-markdown 221s r-cran-testthat r-cran-getopt r-cran-covr r-cran-httr r-cran-roxygen2 221s r-cran-inline r-cran-callr r-cran-plm r-cran-zoo r-cran-survival debhelper 221s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 221s texlive-latex-base-doc wp2latex 221s Recommended packages: 221s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 221s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-testthat 221s r-cran-curl r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi 221s r-cran-miniui r-cran-rsconnect r-cran-tibble r-cran-testit r-cran-tufte 221s r-cran-xml2 r-cran-webshot r-cran-ggplot2 r-cran-thematic r-cran-callr 221s r-cran-covr r-cran-mockery r-cran-processx r-cran-ps r-cran-rprojroot 221s r-cran-whoami r-cran-lattice r-cran-dplyr r-cran-rsvg r-cran-pillar 221s r-cran-spelling r-cran-dbi r-cran-rsqlite r-cran-waldo r-cran-cairo 221s r-cran-markdown r-cran-ragg r-cran-httr r-cran-r.rsp r-cran-sf 221s r-cran-codetools r-cran-formatr r-cran-gridsvg r-cran-jpeg r-cran-magick 221s r-cran-png r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 221s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-future r-cran-purrr 221s r-cran-usethis r-cran-dygraphs r-cran-bit64 r-cran-generics r-cran-pkgdown 221s r-cran-zeallot r-cran-renv r-cran-runit lmodern dvisvgm 221s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 221s x11-xserver-utils 221s The following packages will be REMOVED: 221s libcurl4 libpsl5 221s The following NEW packages will be installed: 221s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 221s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 221s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 221s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 221s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 221s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 221s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 221s libbibtex-parser-perl libblas-dev libblas3 libbz2-dev libc-dev-bin libc6-dev 221s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 221s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 221s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 221s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 221s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 221s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 221s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 221s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 221s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 221s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 221s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 221s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 221s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 221s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 221s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 221s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 221s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 221s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 221s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 221s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 221s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-rhtslib r-bioc-zlibbioc 221s r-cran-base64enc r-cran-biocmanager r-cran-bookdown r-cran-bslib 221s r-cran-cachem r-cran-cli r-cran-commonmark r-cran-crayon r-cran-digest 221s r-cran-ellipsis r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs 221s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-jquerylib 221s r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lifecycle r-cran-littler 221s r-cran-magrittr r-cran-memoise r-cran-mime r-cran-pkgkitten r-cran-promises 221s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rlang r-cran-rmarkdown 221s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-stringr 221s r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xtable 221s r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 221s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 221s xdg-utils zip zlib1g-dev 221s The following packages will be upgraded: 221s curl 221s 1 upgraded, 204 newly installed, 2 to remove and 0 not upgraded. 221s Need to get 325 MB/325 MB of archives. 221s After this operation, 1097 MB of additional disk space will be used. 221s Get:1 /tmp/autopkgtest.2rSY6K/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [752 B] 221s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 221s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 221s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 221s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 221s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 221s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 221s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 222s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 222s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 222s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 222s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 222s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 222s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 222s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 222s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 222s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 222s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 222s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 222s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 222s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 222s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 222s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 222s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 223s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 223s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 223s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 223s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 223s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 223s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 223s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 223s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 223s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 223s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 223s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 223s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 223s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 223s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 224s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 224s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 224s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 224s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 224s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 224s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 224s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 224s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 224s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 224s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 224s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 224s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 224s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 224s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 224s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 224s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 224s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 224s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 224s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 224s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 224s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 224s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 224s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 224s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 224s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 224s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 224s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 224s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 224s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 224s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 224s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 224s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 224s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 225s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 225s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 225s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 225s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 225s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 225s Get:77 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 225s Get:78 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 225s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 225s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 225s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 225s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 225s Get:83 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 225s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 225s Get:85 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 225s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 225s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 225s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 225s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 225s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 225s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 225s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 225s Get:93 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 225s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 225s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 225s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 225s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 225s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 225s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 225s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 225s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 226s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 226s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 226s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 226s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 226s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 226s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 226s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 226s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 226s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 226s Get:111 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 226s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 226s Get:113 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 226s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 226s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 226s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 226s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 226s Get:118 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 226s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 226s Get:120 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 226s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 226s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 226s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 226s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 226s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 226s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 226s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 226s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 226s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 226s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 226s Get:131 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 226s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 226s Get:133 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 226s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 226s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 228s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 228s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 228s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 228s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 228s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 228s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 228s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 230s Get:143 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 230s Get:144 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 230s Get:145 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 230s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 230s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 230s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 230s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 230s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 230s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 230s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 230s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 230s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 230s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 230s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 230s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 230s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 230s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 230s Get:160 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 230s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 230s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 230s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 230s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 230s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 230s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 230s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 230s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 230s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 230s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 230s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 230s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 230s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 230s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 231s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 231s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 231s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 231s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 231s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 231s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 231s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 231s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 231s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 231s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 231s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 231s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 231s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 231s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 231s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 231s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 231s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 231s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 231s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 231s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 231s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 231s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 231s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 231s Get:198 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 231s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 232s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 233s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 233s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 236s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 236s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 236s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-3build1 [1409 kB] 237s Preconfiguring packages ... 237s Fetched 325 MB in 16s (20.5 MB/s) 237s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 237s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 237s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 237s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 237s wget depends on libpsl5 (>= 0.16.0). 237s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 237s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 237s 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 238s Removing libpsl5:s390x (0.21.2-1build1) ... 238s Selecting previously unselected package libpsl5t64:s390x. 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 238s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 238s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 238s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 238s s390-tools depends on libcurl4 (>= 7.16.2). 238s 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 238s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 238s Selecting previously unselected package libcurl4t64:s390x. 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 238s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 238s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 238s Selecting previously unselected package libc-dev-bin. 238s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 238s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 238s Selecting previously unselected package linux-libc-dev:s390x. 238s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 238s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 238s Selecting previously unselected package libcrypt-dev:s390x. 238s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 238s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 238s Selecting previously unselected package libtirpc-dev:s390x. 238s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 238s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 238s Selecting previously unselected package libnsl-dev:s390x. 238s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 238s Unpacking libnsl-dev:s390x (1.3.0-3) ... 238s Selecting previously unselected package rpcsvc-proto. 238s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 238s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 238s Selecting previously unselected package libc6-dev:s390x. 238s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 238s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 238s Selecting previously unselected package libisl23:s390x. 238s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 238s Unpacking libisl23:s390x (0.26-3) ... 238s Selecting previously unselected package libmpc3:s390x. 238s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 238s Unpacking libmpc3:s390x (1.3.1-1) ... 238s Selecting previously unselected package cpp-13-s390x-linux-gnu. 238s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 238s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 238s Selecting previously unselected package cpp-13. 238s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 238s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 238s Selecting previously unselected package cpp-s390x-linux-gnu. 238s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 238s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 238s Selecting previously unselected package cpp. 238s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 238s Unpacking cpp (4:13.2.0-7ubuntu1) ... 238s Selecting previously unselected package libcc1-0:s390x. 238s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libgomp1:s390x. 238s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libitm1:s390x. 238s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libatomic1:s390x. 238s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libasan8:s390x. 238s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libubsan1:s390x. 238s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 238s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 238s Selecting previously unselected package libgcc-13-dev:s390x. 238s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 238s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 238s Selecting previously unselected package gcc-13-s390x-linux-gnu. 238s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 238s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 239s Selecting previously unselected package gcc-13. 239s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 239s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 239s Selecting previously unselected package gcc-s390x-linux-gnu. 239s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 239s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 239s Selecting previously unselected package gcc. 239s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 239s Unpacking gcc (4:13.2.0-7ubuntu1) ... 239s Selecting previously unselected package libstdc++-13-dev:s390x. 239s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 239s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 239s Selecting previously unselected package g++-13-s390x-linux-gnu. 239s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 239s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 239s Selecting previously unselected package g++-13. 239s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 239s Unpacking g++-13 (13.2.0-17ubuntu2) ... 239s Selecting previously unselected package g++-s390x-linux-gnu. 239s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 239s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 239s Selecting previously unselected package g++. 239s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 239s Unpacking g++ (4:13.2.0-7ubuntu1) ... 239s Selecting previously unselected package build-essential. 239s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 239s Unpacking build-essential (12.10ubuntu1) ... 239s Selecting previously unselected package dctrl-tools. 239s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 239s Unpacking dctrl-tools (2.24-3build2) ... 239s Selecting previously unselected package libfreetype6:s390x. 239s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 239s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 239s Selecting previously unselected package fonts-dejavu-mono. 239s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 239s Unpacking fonts-dejavu-mono (2.37-8) ... 239s Selecting previously unselected package fonts-dejavu-core. 239s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 239s Unpacking fonts-dejavu-core (2.37-8) ... 239s Selecting previously unselected package fontconfig-config. 239s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 240s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 240s Selecting previously unselected package libfontconfig1:s390x. 240s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 240s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 240s Selecting previously unselected package fontconfig. 240s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 240s Unpacking fontconfig (2.15.0-1ubuntu1) ... 240s Selecting previously unselected package fonts-font-awesome. 240s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 240s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 240s Selecting previously unselected package fonts-glyphicons-halflings. 240s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 240s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 240s Selecting previously unselected package fonts-lmodern. 240s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 240s Unpacking fonts-lmodern (2.005-1) ... 240s Selecting previously unselected package fonts-mathjax. 240s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 240s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 240s Selecting previously unselected package libgfortran5:s390x. 240s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 240s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 240s Selecting previously unselected package libgfortran-13-dev:s390x. 240s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 240s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 240s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 240s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 240s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 240s Selecting previously unselected package gfortran-13. 240s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 240s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 240s Selecting previously unselected package gfortran-s390x-linux-gnu. 240s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 240s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 240s Selecting previously unselected package gfortran. 240s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 240s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 240s Selecting previously unselected package icu-devtools. 240s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 240s Unpacking icu-devtools (74.2-1ubuntu1) ... 240s Selecting previously unselected package javascript-common. 240s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 240s Unpacking javascript-common (11+nmu1) ... 240s Selecting previously unselected package libio-string-perl. 240s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 240s Unpacking libio-string-perl (1.08-4) ... 240s Selecting previously unselected package liblatex-tounicode-perl. 240s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 240s Unpacking liblatex-tounicode-perl (0.54-2) ... 240s Selecting previously unselected package libbibtex-parser-perl. 240s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 240s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 240s Selecting previously unselected package libblas3:s390x. 240s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 240s Unpacking libblas3:s390x (3.12.0-3) ... 240s Selecting previously unselected package libblas-dev:s390x. 240s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 240s Unpacking libblas-dev:s390x (3.12.0-3) ... 241s Selecting previously unselected package libbz2-dev:s390x. 241s Preparing to unpack .../055-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 241s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 241s Selecting previously unselected package libpixman-1-0:s390x. 241s Preparing to unpack .../056-libpixman-1-0_0.42.2-1_s390x.deb ... 241s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 241s Selecting previously unselected package libxcb-render0:s390x. 241s Preparing to unpack .../057-libxcb-render0_1.15-1_s390x.deb ... 241s Unpacking libxcb-render0:s390x (1.15-1) ... 241s Selecting previously unselected package libxcb-shm0:s390x. 241s Preparing to unpack .../058-libxcb-shm0_1.15-1_s390x.deb ... 241s Unpacking libxcb-shm0:s390x (1.15-1) ... 241s Selecting previously unselected package libxrender1:s390x. 241s Preparing to unpack .../059-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 241s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 241s Selecting previously unselected package libcairo2:s390x. 241s Preparing to unpack .../060-libcairo2_1.18.0-1_s390x.deb ... 241s Unpacking libcairo2:s390x (1.18.0-1) ... 241s Selecting previously unselected package libdatrie1:s390x. 241s Preparing to unpack .../061-libdatrie1_0.2.13-3_s390x.deb ... 241s Unpacking libdatrie1:s390x (0.2.13-3) ... 241s Selecting previously unselected package libdeflate0:s390x. 241s Preparing to unpack .../062-libdeflate0_1.19-1_s390x.deb ... 241s Unpacking libdeflate0:s390x (1.19-1) ... 241s Selecting previously unselected package libgraphite2-3:s390x. 241s Preparing to unpack .../063-libgraphite2-3_1.3.14-2_s390x.deb ... 241s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 241s Selecting previously unselected package libharfbuzz0b:s390x. 241s Preparing to unpack .../064-libharfbuzz0b_8.3.0-2_s390x.deb ... 241s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 241s Selecting previously unselected package x11-common. 241s Preparing to unpack .../065-x11-common_1%3a7.7+23ubuntu2_all.deb ... 241s Unpacking x11-common (1:7.7+23ubuntu2) ... 241s Selecting previously unselected package libice6:s390x. 241s Preparing to unpack .../066-libice6_2%3a1.0.10-1build2_s390x.deb ... 241s Unpacking libice6:s390x (2:1.0.10-1build2) ... 241s Selecting previously unselected package libicu-dev:s390x. 241s Preparing to unpack .../067-libicu-dev_74.2-1ubuntu1_s390x.deb ... 241s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 241s Selecting previously unselected package libjpeg-turbo8:s390x. 241s Preparing to unpack .../068-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 241s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 241s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 241s Preparing to unpack .../069-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 241s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 241s Selecting previously unselected package libjpeg8:s390x. 241s Preparing to unpack .../070-libjpeg8_8c-2ubuntu11_s390x.deb ... 241s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 241s Selecting previously unselected package libjpeg8-dev:s390x. 241s Preparing to unpack .../071-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 241s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 241s Selecting previously unselected package libjpeg-dev:s390x. 241s Preparing to unpack .../072-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 241s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 241s Selecting previously unselected package libjs-bootstrap. 241s Preparing to unpack .../073-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 241s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 241s Selecting previously unselected package libjs-popper.js. 241s Preparing to unpack .../074-libjs-popper.js_1.16.1+ds-6_all.deb ... 241s Unpacking libjs-popper.js (1.16.1+ds-6) ... 241s Selecting previously unselected package libjs-bootstrap4. 241s Preparing to unpack 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libjs-jquery-datatables (1.11.5+dfsg-2) ... 241s Selecting previously unselected package libjs-sifter.js. 241s Preparing to unpack .../081-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 241s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 241s Selecting previously unselected package libjs-microplugin.js. 241s Preparing to unpack .../082-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 241s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 241s Selecting previously unselected package libjs-jquery-selectize.js. 241s Preparing to unpack .../083-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 241s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 241s Selecting previously unselected package libjs-jquery-ui. 241s Preparing to unpack .../084-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 241s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 241s Selecting previously unselected package libjs-json. 241s Preparing to unpack .../085-libjs-json_0~20221030+~1.0.8-1_all.deb ... 241s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 241s Selecting previously unselected package libjs-lunr. 241s Preparing to unpack .../086-libjs-lunr_2.3.9~dfsg-2_all.deb ... 241s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 241s Selecting previously unselected package libjs-prettify. 241s Preparing to unpack .../087-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 241s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 242s Selecting previously unselected package libkpathsea6:s390x. 242s Preparing to unpack .../088-libkpathsea6_2023.20230311.66589-9_s390x.deb ... 242s Unpacking libkpathsea6:s390x (2023.20230311.66589-9) ... 242s Selecting previously unselected package liblapack3:s390x. 242s Preparing to unpack .../089-liblapack3_3.12.0-3_s390x.deb ... 242s Unpacking liblapack3:s390x (3.12.0-3) ... 242s Selecting previously unselected package liblapack-dev:s390x. 242s Preparing to unpack .../090-liblapack-dev_3.12.0-3_s390x.deb ... 242s Unpacking liblapack-dev:s390x (3.12.0-3) ... 242s Selecting previously unselected package liblua5.4-0:s390x. 242s Preparing to unpack .../091-liblua5.4-0_5.4.6-3_s390x.deb ... 242s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 242s Selecting previously unselected package libncurses-dev:s390x. 242s Preparing to unpack .../092-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 242s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 242s Selecting previously unselected package libthai-data. 242s Preparing to unpack .../093-libthai-data_0.1.29-2_all.deb ... 242s Unpacking libthai-data (0.1.29-2) ... 242s Selecting previously unselected package libthai0:s390x. 242s Preparing to unpack .../094-libthai0_0.1.29-2_s390x.deb ... 242s Unpacking libthai0:s390x (0.1.29-2) ... 242s Selecting previously unselected package libpango-1.0-0:s390x. 242s Preparing to unpack .../095-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 242s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 242s Selecting previously unselected package libpangoft2-1.0-0:s390x. 242s Preparing to unpack .../096-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 242s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 242s Selecting previously unselected package libpangocairo-1.0-0:s390x. 242s Preparing to unpack .../097-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 242s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 242s Selecting previously unselected package libpaper1:s390x. 242s Preparing to unpack .../098-libpaper1_1.1.29_s390x.deb ... 242s Unpacking libpaper1:s390x (1.1.29) ... 242s Selecting previously unselected package libpaper-utils. 242s Preparing to unpack .../099-libpaper-utils_1.1.29_s390x.deb ... 242s Unpacking libpaper-utils (1.1.29) ... 242s Selecting previously unselected package libpcre2-16-0:s390x. 242s Preparing to unpack .../100-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 242s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 242s Selecting previously unselected package libpcre2-32-0:s390x. 242s Preparing to unpack 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.../106-libpng-dev_1.6.43-1_s390x.deb ... 242s Unpacking libpng-dev:s390x (1.6.43-1) ... 242s Selecting previously unselected package libpotrace0:s390x. 242s Preparing to unpack .../107-libpotrace0_1.16-2_s390x.deb ... 242s Unpacking libpotrace0:s390x (1.16-2) ... 242s Selecting previously unselected package libptexenc1:s390x. 242s Preparing to unpack .../108-libptexenc1_2023.20230311.66589-9_s390x.deb ... 242s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 242s Selecting previously unselected package libreadline-dev:s390x. 242s Preparing to unpack .../109-libreadline-dev_8.2-3_s390x.deb ... 242s Unpacking libreadline-dev:s390x (8.2-3) ... 242s Selecting previously unselected package libsharpyuv0:s390x. 242s Preparing to unpack .../110-libsharpyuv0_1.3.2-0.4_s390x.deb ... 242s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 242s Selecting previously unselected package libsm6:s390x. 242s Preparing to unpack .../111-libsm6_2%3a1.2.3-1build2_s390x.deb ... 242s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 242s Selecting previously unselected package libsynctex2:s390x. 242s Preparing to unpack .../112-libsynctex2_2023.20230311.66589-9_s390x.deb ... 242s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 242s Selecting previously unselected package libtcl8.6:s390x. 242s Preparing to unpack .../113-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 242s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 242s Selecting previously unselected package libteckit0:s390x. 242s Preparing to unpack .../114-libteckit0_2.5.12+ds1-1_s390x.deb ... 242s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 242s Selecting previously unselected package libtexlua53-5:s390x. 242s Preparing to unpack .../115-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 242s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 242s Selecting previously unselected package libjbig0:s390x. 242s Preparing to unpack .../116-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 242s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 242s Selecting previously unselected package libwebp7:s390x. 242s Preparing to unpack .../117-libwebp7_1.3.2-0.4_s390x.deb ... 242s Unpacking libwebp7:s390x (1.3.2-0.4) ... 242s Selecting previously unselected package libtiff6:s390x. 242s Preparing to unpack .../118-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 242s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 242s Selecting previously unselected package libxft2:s390x. 242s Preparing to unpack .../119-libxft2_2.3.6-1_s390x.deb ... 242s Unpacking libxft2:s390x (2.3.6-1) ... 242s Selecting previously unselected package libxss1:s390x. 242s Preparing to unpack .../120-libxss1_1%3a1.2.3-1build2_s390x.deb ... 242s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 242s Selecting previously unselected package libtk8.6:s390x. 242s Preparing to unpack .../121-libtk8.6_8.6.13-2_s390x.deb ... 242s Unpacking libtk8.6:s390x (8.6.13-2) ... 242s Selecting previously unselected package libxt6:s390x. 242s Preparing to unpack .../122-libxt6_1%3a1.2.1-1.1_s390x.deb ... 242s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 242s Selecting previously unselected package libxmu6:s390x. 242s Preparing to unpack .../123-libxmu6_2%3a1.1.3-3_s390x.deb ... 242s Unpacking libxmu6:s390x (2:1.1.3-3) ... 242s Selecting previously unselected package libxpm4:s390x. 242s Preparing to unpack .../124-libxpm4_1%3a3.5.17-1_s390x.deb ... 242s Unpacking libxpm4:s390x (1:3.5.17-1) ... 242s Selecting previously unselected package libxaw7:s390x. 242s Preparing to unpack .../125-libxaw7_2%3a1.0.14-1_s390x.deb ... 242s Unpacking libxaw7:s390x (2:1.0.14-1) ... 242s Selecting previously unselected package libxi6:s390x. 242s Preparing to unpack .../126-libxi6_2%3a1.8.1-1_s390x.deb ... 242s Unpacking libxi6:s390x (2:1.8.1-1) ... 242s Selecting previously unselected package libzzip-0-13:s390x. 242s Preparing to unpack .../127-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 242s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 243s Selecting previously unselected package zip. 243s Preparing to unpack .../128-zip_3.0-13_s390x.deb ... 243s Unpacking zip (3.0-13) ... 243s Selecting previously unselected package unzip. 243s Preparing to unpack .../129-unzip_6.0-28ubuntu3_s390x.deb ... 243s Unpacking unzip (6.0-28ubuntu3) ... 243s Selecting previously unselected package xdg-utils. 243s Preparing to unpack .../130-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 243s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 243s Selecting previously unselected package r-base-core. 243s Preparing to unpack .../131-r-base-core_4.3.2-1build1_s390x.deb ... 243s Unpacking r-base-core (4.3.2-1build1) ... 243s Selecting previously unselected package r-cran-littler. 243s Preparing to unpack .../132-r-cran-littler_0.3.19-1_s390x.deb ... 243s Unpacking r-cran-littler (0.3.19-1) ... 243s Selecting previously unselected package littler. 243s Preparing to unpack .../133-littler_0.3.19-1_all.deb ... 243s Unpacking littler (0.3.19-1) ... 243s Selecting previously unselected package node-bootstrap-sass. 243s Preparing to unpack .../134-node-bootstrap-sass_3.4.3-2_all.deb ... 243s Unpacking node-bootstrap-sass (3.4.3-2) ... 243s Selecting previously unselected package node-html5shiv. 243s Preparing to unpack .../135-node-html5shiv_3.7.3+dfsg-5_all.deb ... 243s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 243s Selecting previously unselected package node-normalize.css. 243s Preparing to unpack .../136-node-normalize.css_8.0.1-5_all.deb ... 243s Unpacking node-normalize.css (8.0.1-5) ... 243s Selecting previously unselected package pandoc-data. 243s Preparing to unpack .../137-pandoc-data_3.1.3-1_all.deb ... 243s Unpacking pandoc-data (3.1.3-1) ... 243s Selecting previously unselected package pandoc. 243s Preparing to unpack .../138-pandoc_3.1.3+ds-2_s390x.deb ... 243s Unpacking pandoc (3.1.3+ds-2) ... 245s Selecting previously unselected package pkgconf-bin. 245s Preparing to unpack .../139-pkgconf-bin_1.8.1-2_s390x.deb ... 245s Unpacking pkgconf-bin (1.8.1-2) ... 245s Selecting previously unselected package pkgconf:s390x. 245s Preparing to unpack .../140-pkgconf_1.8.1-2_s390x.deb ... 245s Unpacking pkgconf:s390x (1.8.1-2) ... 245s Selecting previously unselected package pkg-config:s390x. 245s Preparing to unpack .../141-pkg-config_1.8.1-2_s390x.deb ... 245s Unpacking pkg-config:s390x (1.8.1-2) ... 245s Selecting previously unselected package liblzma-dev:s390x. 245s Preparing to unpack .../142-liblzma-dev_5.4.5-0.3_s390x.deb ... 245s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 245s Selecting previously unselected package r-base-dev. 245s Preparing to unpack .../143-r-base-dev_4.3.2-1build1_all.deb ... 245s Unpacking r-base-dev (4.3.2-1build1) ... 245s Selecting previously unselected package pkg-r-autopkgtest. 245s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 245s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 245s Selecting previously unselected package r-bioc-biocgenerics. 245s Preparing to unpack .../145-r-bioc-biocgenerics_0.48.1-2_all.deb ... 245s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 245s Selecting previously unselected package r-cran-base64enc. 245s Preparing to unpack .../146-r-cran-base64enc_0.1-3-3_s390x.deb ... 245s Unpacking r-cran-base64enc (0.1-3-3) ... 245s Selecting previously unselected package r-cran-digest. 245s Preparing to unpack .../147-r-cran-digest_0.6.34-1_s390x.deb ... 245s Unpacking r-cran-digest (0.6.34-1) ... 245s Selecting previously unselected package r-cran-rlang. 245s Preparing to unpack .../148-r-cran-rlang_1.1.3-1_s390x.deb ... 245s Unpacking r-cran-rlang (1.1.3-1) ... 245s Selecting previously unselected package r-cran-ellipsis. 245s Preparing to unpack .../149-r-cran-ellipsis_0.3.2-2_s390x.deb ... 245s Unpacking r-cran-ellipsis (0.3.2-2) ... 245s Selecting previously unselected package r-cran-fastmap. 245s Preparing to unpack .../150-r-cran-fastmap_1.1.1-1_s390x.deb ... 245s Unpacking r-cran-fastmap (1.1.1-1) ... 245s Selecting previously unselected package r-cran-htmltools. 245s Preparing to unpack .../151-r-cran-htmltools_0.5.7-1_s390x.deb ... 245s Unpacking r-cran-htmltools (0.5.7-1) ... 245s Selecting previously unselected package r-cran-evaluate. 245s Preparing to unpack .../152-r-cran-evaluate_0.23-1_all.deb ... 245s Unpacking r-cran-evaluate (0.23-1) ... 245s Selecting previously unselected package r-cran-xfun. 245s Preparing to unpack .../153-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 245s Unpacking r-cran-xfun (0.41+dfsg-1) ... 245s Selecting previously unselected package r-cran-highr. 245s Preparing to unpack .../154-r-cran-highr_0.10+dfsg-1_all.deb ... 245s Unpacking r-cran-highr (0.10+dfsg-1) ... 245s Selecting previously unselected package r-cran-yaml. 245s Preparing to unpack .../155-r-cran-yaml_2.3.8-1_s390x.deb ... 245s Unpacking r-cran-yaml (2.3.8-1) ... 245s Selecting previously unselected package libjs-mathjax. 245s Preparing to unpack .../156-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 245s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 246s Selecting previously unselected package r-cran-knitr. 246s Preparing to unpack .../157-r-cran-knitr_1.45+dfsg-1_all.deb ... 246s Unpacking r-cran-knitr (1.45+dfsg-1) ... 246s Selecting previously unselected package r-cran-cachem. 246s Preparing to unpack .../158-r-cran-cachem_1.0.8-1_s390x.deb ... 246s Unpacking r-cran-cachem (1.0.8-1) ... 246s Selecting previously unselected package r-cran-jquerylib. 246s Preparing to unpack .../159-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 246s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 246s Selecting previously unselected package r-cran-jsonlite. 246s Preparing to unpack .../160-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 246s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 246s Selecting previously unselected package r-cran-cli. 246s Preparing to unpack .../161-r-cran-cli_3.6.2-1_s390x.deb ... 246s Unpacking r-cran-cli (3.6.2-1) ... 246s Selecting previously unselected package r-cran-glue. 246s Preparing to unpack .../162-r-cran-glue_1.7.0-1_s390x.deb ... 246s Unpacking r-cran-glue (1.7.0-1) ... 246s Selecting previously unselected package r-cran-lifecycle. 246s Preparing to unpack .../163-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 246s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 246s Selecting previously unselected package r-cran-memoise. 246s Preparing to unpack .../164-r-cran-memoise_2.0.1-1_all.deb ... 246s Unpacking r-cran-memoise (2.0.1-1) ... 246s Selecting previously unselected package r-cran-mime. 246s Preparing to unpack .../165-r-cran-mime_0.12-1_s390x.deb ... 246s Unpacking r-cran-mime (0.12-1) ... 246s Selecting previously unselected package r-cran-fs. 246s Preparing to unpack .../166-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 246s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 246s Selecting previously unselected package r-cran-r6. 246s Preparing to unpack .../167-r-cran-r6_2.5.1-1_all.deb ... 246s Unpacking r-cran-r6 (2.5.1-1) ... 246s Selecting previously unselected package r-cran-rappdirs. 246s Preparing to unpack .../168-r-cran-rappdirs_0.3.3-1_s390x.deb ... 246s Unpacking r-cran-rappdirs (0.3.3-1) ... 246s Selecting previously unselected package r-cran-sass. 246s Preparing to unpack .../169-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 246s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 246s Selecting previously unselected package r-cran-bslib. 246s Preparing to unpack .../170-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 246s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 246s Selecting previously unselected package r-cran-fontawesome. 246s Preparing to unpack .../171-r-cran-fontawesome_0.5.2-1_all.deb ... 246s Unpacking r-cran-fontawesome (0.5.2-1) ... 247s Selecting previously unselected package r-cran-magrittr. 247s Preparing to unpack .../172-r-cran-magrittr_2.0.3-1_s390x.deb ... 247s Unpacking r-cran-magrittr (2.0.3-1) ... 247s Selecting previously unselected package r-cran-stringi. 247s Preparing to unpack .../173-r-cran-stringi_1.8.3-1_s390x.deb ... 247s Unpacking r-cran-stringi (1.8.3-1) ... 247s Selecting previously unselected package r-cran-vctrs. 247s Preparing to unpack .../174-r-cran-vctrs_0.6.5-1_s390x.deb ... 247s Unpacking r-cran-vctrs (0.6.5-1) ... 247s Selecting previously unselected package r-cran-stringr. 247s Preparing to unpack .../175-r-cran-stringr_1.5.1-1_all.deb ... 247s Unpacking r-cran-stringr (1.5.1-1) ... 247s Selecting previously unselected package r-cran-tinytex. 247s Preparing to unpack .../176-r-cran-tinytex_0.49-1_all.deb ... 247s Unpacking r-cran-tinytex (0.49-1) ... 247s Selecting previously unselected package libjs-modernizr. 247s Preparing to unpack .../177-libjs-modernizr_2.6.2+ds1-5_all.deb ... 247s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 247s Selecting previously unselected package r-cran-pkgkitten. 247s Preparing to unpack .../178-r-cran-pkgkitten_0.2.3-1_all.deb ... 247s Unpacking r-cran-pkgkitten (0.2.3-1) ... 247s Selecting previously unselected package r-cran-rcpp. 247s Preparing to unpack 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... 247s Selecting previously unselected package r-cran-crayon. 247s Preparing to unpack .../185-r-cran-crayon_1.5.2-1_all.deb ... 247s Unpacking r-cran-crayon (1.5.2-1) ... 247s Selecting previously unselected package r-cran-withr. 247s Preparing to unpack .../186-r-cran-withr_2.5.0-1_all.deb ... 247s Unpacking r-cran-withr (2.5.0-1) ... 247s Selecting previously unselected package r-cran-commonmark. 247s Preparing to unpack .../187-r-cran-commonmark_1.9.1-1_s390x.deb ... 247s Unpacking r-cran-commonmark (1.9.1-1) ... 247s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 247s Preparing to unpack .../188-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 247s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 247s Selecting previously unselected package r-cran-shiny. 247s Preparing to unpack .../189-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 247s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 247s Selecting previously unselected package 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Creating config file /etc/R/Renviron with new version 261s Setting up r-cran-crayon (1.5.2-1) ... 261s Setting up r-cran-sourcetools (0.1.7-1-1) ... 261s Setting up g++ (4:13.2.0-7ubuntu1) ... 261s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 261s Setting up texlive-binaries (2023.20230311.66589-9) ... 261s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 261s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 261s Setting up build-essential (12.10ubuntu1) ... 261s Setting up r-cran-commonmark (1.9.1-1) ... 261s Setting up r-cran-r6 (2.5.1-1) ... 261s Setting up r-cran-pkgkitten (0.2.3-1) ... 261s Setting up texlive-base (2023.20240207-1) ... 261s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 261s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 262s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 262s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 262s Setting up r-cran-magrittr (2.0.3-1) ... 262s Setting up r-cran-rappdirs (0.3.3-1) ... 262s Setting up r-cran-littler (0.3.19-1) ... 262s Setting up r-cran-fs (1.6.3+dfsg-1) ... 262s Setting up r-cran-rcpp (1.0.12-1) ... 262s Setting up r-bioc-biocgenerics (0.48.1-2) ... 262s Setting up r-cran-rlang (1.1.3-1) ... 262s Setting up littler (0.3.19-1) ... 262s Setting up r-cran-xfun (0.41+dfsg-1) ... 262s Setting up r-cran-withr (2.5.0-1) ... 262s Setting up r-cran-mime (0.12-1) ... 262s Setting up r-cran-base64enc (0.1-3-3) ... 262s Setting up r-cran-digest (0.6.34-1) ... 262s Setting up r-cran-yaml (2.3.8-1) ... 262s Setting up r-cran-evaluate (0.23-1) ... 262s Setting up r-cran-highr (0.10+dfsg-1) ... 262s Setting up r-cran-glue (1.7.0-1) ... 262s Setting up r-cran-xtable (1:1.8-4-2) ... 262s Setting up r-cran-cli (3.6.2-1) ... 262s Setting up gfortran (4:13.2.0-7ubuntu1) ... 262s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 262s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 262s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 262s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 262s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 262s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 262s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 262s Setting up r-cran-fastmap (1.1.1-1) ... 262s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 262s Setting up r-cran-stringi (1.8.3-1) ... 262s Setting up texlive-latex-base (2023.20240207-1) ... 262s Setting up r-cran-later (1.3.2+dfsg-1) ... 262s Setting up r-cran-tinytex (0.49-1) ... 262s Setting up r-cran-knitr (1.45+dfsg-1) ... 262s Setting up r-cran-cachem (1.0.8-1) ... 262s Setting up r-cran-vctrs (0.6.5-1) ... 262s Setting up r-cran-ellipsis (0.3.2-2) ... 262s Setting up r-base-dev (4.3.2-1build1) ... 262s Setting up r-cran-stringr (1.5.1-1) ... 262s Setting up r-bioc-rhtslib (2.4.1+dfsg-3build1) ... 262s Setting up texlive-bibtex-extra (2023.20240207-1) ... 262s Setting up r-cran-memoise (2.0.1-1) ... 262s Setting up r-cran-promises (1.2.1+dfsg-1) ... 262s Setting up r-cran-htmltools (0.5.7-1) ... 262s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 262s Setting up r-cran-sass (0.4.8+dfsg-1) ... 262s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 262s Setting up r-cran-fontawesome (0.5.2-1) ... 262s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 262s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 262s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 262s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 262s Setting up r-cran-bookdown (0.37+dfsg-1) ... 262s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 262s Setting up autopkgtest-satdep (0) ... 262s Processing triggers for man-db (2.12.0-3) ... 263s Processing triggers for install-info (7.1-3) ... 263s Processing triggers for libc-bin (2.39-0ubuntu2) ... 263s Processing triggers for tex-common (6.18) ... 263s Running updmap-sys. This may take some time... done. 263s Running mktexlsr /var/lib/texmf ... done. 264s Building format(s) --all. 308s This may take some time... done. 314s (Reading database ... 78844 files and directories currently installed.) 314s Removing autopkgtest-satdep (0) ... 314s autopkgtest [18:21:52]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 314s autopkgtest [18:21:52]: test pkg-r-autopkgtest: [----------------------- 314s Test: Try to load the R library Rhtslib 315s 315s R version 4.3.2 (2023-10-31) -- "Eye Holes" 315s Copyright (C) 2023 The R Foundation for Statistical Computing 315s Platform: s390x-ibm-linux-gnu (64-bit) 315s 315s R is free software and comes with ABSOLUTELY NO WARRANTY. 315s You are welcome to redistribute it under certain conditions. 315s Type 'license()' or 'licence()' for distribution details. 315s 315s R is a collaborative project with many contributors. 315s Type 'contributors()' for more information and 315s 'citation()' on how to cite R or R packages in publications. 315s 315s Type 'demo()' for some demos, 'help()' for on-line help, or 315s 'help.start()' for an HTML browser interface to help. 315s Type 'q()' to quit R. 315s 315s > library('Rhtslib') 315s Rhtslib htslib version 1.15.1 315s Warning message: 315s package ‘Rhtslib’ was built under R version 4.3.3 315s > 315s > 315s Other tests are currently unsupported! 315s They will be progressively added. 315s autopkgtest [18:21:53]: test pkg-r-autopkgtest: -----------------------] 315s pkg-r-autopkgtest PASS 315s autopkgtest [18:21:53]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 316s autopkgtest [18:21:54]: @@@@@@@@@@@@@@@@@@@@ summary 316s pkg-r-autopkgtest PASS 334s Creating nova instance adt-noble-s390x-r-bioc-rhtslib-20240316-181637-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...