0s autopkgtest [19:06:52]: starting date and time: 2024-03-16 19:06:52+0000 0s autopkgtest [19:06:52]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:06:52]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6qaar3gu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-isoformswitchanalyzer --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-8.secgroup --name adt-noble-s390x-r-bioc-isoformswitchanalyzer-20240316-190651-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 74s autopkgtest [19:08:06]: testbed dpkg architecture: s390x 75s autopkgtest [19:08:07]: testbed apt version: 2.7.12 75s autopkgtest [19:08:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup 75s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 76s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 76s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 76s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 76s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 76s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 76s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 76s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 76s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 76s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 76s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 76s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 76s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 78s Fetched 8760 kB in 2s (3884 kB/s) 79s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s Calculating upgrade... 81s The following packages will be REMOVED: 81s libssl3 81s The following NEW packages will be installed: 81s libssl3t64 81s The following packages have been kept back: 81s curl 81s The following packages will be upgraded: 81s openssl ubuntu-minimal ubuntu-standard 82s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 82s Need to get 2680 kB of archives. 82s After this operation, 23.6 kB of additional disk space will be used. 82s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 82s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 83s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 83s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 83s Fetched 2680 kB in 1s (2220 kB/s) 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 83s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 83s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 83s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 83s wget depends on libssl3 (>= 3.0.0). 83s tnftp depends on libssl3 (>= 3.0.0). 83s tcpdump depends on libssl3 (>= 3.0.0). 83s systemd-resolved depends on libssl3 (>= 3.0.0). 83s systemd depends on libssl3 (>= 3.0.0). 83s sudo depends on libssl3 (>= 3.0.0). 83s s390-tools depends on libssl3 (>= 3.0.0). 83s rsync depends on libssl3 (>= 3.0.0). 83s python3-cryptography depends on libssl3 (>= 3.0.0). 83s openssh-server depends on libssl3 (>= 3.0.10). 83s openssh-client depends on libssl3 (>= 3.0.10). 83s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 83s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 83s libssh-4:s390x depends on libssl3 (>= 3.0.0). 83s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 83s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 83s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 83s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 83s libnvme1 depends on libssl3 (>= 3.0.0). 83s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 83s libkmod2:s390x depends on libssl3 (>= 3.0.0). 83s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 83s libcurl4:s390x depends on libssl3 (>= 3.0.0). 83s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 83s kmod depends on libssl3 (>= 3.0.0). 83s dhcpcd-base depends on libssl3 (>= 3.0.0). 83s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 83s 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 83s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 83s Selecting previously unselected package libssl3t64:s390x. 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 83s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 83s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 83s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 83s Unpacking ubuntu-minimal (1.536) over (1.535) ... 83s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 83s Unpacking ubuntu-standard (1.536) over (1.535) ... 83s Setting up ubuntu-minimal (1.536) ... 83s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 83s Setting up ubuntu-standard (1.536) ... 83s Setting up openssl (3.0.13-0ubuntu1) ... 83s Processing triggers for man-db (2.12.0-3) ... 84s Processing triggers for libc-bin (2.39-0ubuntu2) ... 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 85s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 85s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 85s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 85s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 86s Reading package lists... 86s Reading package lists... 86s Building dependency tree... 86s Reading state information... 86s Calculating upgrade... 86s The following packages have been kept back: 86s curl 86s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 86s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 89s autopkgtest [19:08:21]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 90s autopkgtest [19:08:22]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-isoformswitchanalyzer 92s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-isoformswitchanalyzer 2.2.0+ds-1 (dsc) [2863 B] 92s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-isoformswitchanalyzer 2.2.0+ds-1 (tar) [3120 kB] 92s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-isoformswitchanalyzer 2.2.0+ds-1 (diff) [3032 B] 92s gpgv: Signature made Fri Dec 8 14:54:19 2023 UTC 92s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 92s gpgv: issuer "tille@debian.org" 92s gpgv: Can't check signature: No public key 92s dpkg-source: warning: cannot verify inline signature for ./r-bioc-isoformswitchanalyzer_2.2.0+ds-1.dsc: no acceptable signature found 93s autopkgtest [19:08:25]: testing package r-bioc-isoformswitchanalyzer version 2.2.0+ds-1 93s autopkgtest [19:08:25]: build not needed 94s autopkgtest [19:08:26]: test pkg-r-autopkgtest: preparing testbed 96s Reading package lists... 96s Building dependency tree... 96s Reading state information... 96s Starting pkgProblemResolver with broken count: 0 96s Starting 2 pkgProblemResolver with broken count: 0 96s Done 96s The following additional packages will be installed: 96s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 96s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 96s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-13 96s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 96s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 96s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 96s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 96s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 96s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 96s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 96s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 96s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 96s libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions 96s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 96s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 96s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 96s liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 96s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 96s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 96s libpng-dev libpsl5t64 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev 96s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 96s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 96s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 96s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 96s r-base-core r-base-dev r-bioc-annotate r-bioc-annotationdbi 96s r-bioc-annotationfilter r-bioc-annotationhub r-bioc-biobase 96s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 96s r-bioc-biocversion r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 96s r-bioc-delayedarray r-bioc-deseq2 r-bioc-dexseq r-bioc-edger 96s r-bioc-ensembldb r-bioc-genefilter r-bioc-geneplotter r-bioc-genomeinfodb 96s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 96s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 96s r-bioc-isoformswitchanalyzer r-bioc-keggrest r-bioc-limma 96s r-bioc-matrixgenerics r-bioc-pfamanalyzer r-bioc-protgenerics r-bioc-rhtslib 96s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 96s r-bioc-saturn r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-sva 96s r-bioc-tximeta r-bioc-tximport r-bioc-xvector r-bioc-zlibbioc r-cran-abind 96s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 96s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-boot r-cran-bslib 96s r-cran-cachem r-cran-cli r-cran-clipr r-cran-codetools r-cran-colorspace 96s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 96s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-dt 96s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap 96s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 96s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2 96s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hms 96s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-hwriter 96s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 96s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 96s r-cran-littler r-cran-locfdr r-cran-locfit r-cran-magrittr r-cran-mass 96s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 96s r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pbapply r-cran-pillar 96s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plyr r-cran-png 96s r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 96s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 96s r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-restfulr r-cran-rjson 96s r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-sass r-cran-scales 96s r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-statmod r-cran-stringi 96s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 96s r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-vctrs 96s r-cran-venndiagram r-cran-viridislite r-cran-vroom r-cran-withr r-cran-xfun 96s r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 96s x11-common xdg-utils zip zlib1g-dev 96s Suggested packages: 96s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 96s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 96s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 96s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 96s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 96s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 96s libboost-context1.83-dev libboost-contract1.83-dev 96s libboost-coroutine1.83-dev libboost-date-time1.83-dev 96s libboost-exception1.83-dev libboost-fiber1.83-dev 96s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 96s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 96s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 96s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 96s libboost-numpy1.83-dev libboost-program-options1.83-dev 96s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 96s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 96s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 96s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 96s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 96s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 96s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 96s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 96s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 96s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 96s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base 96s texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra 96s texlive-extra-utils texinfo r-bioc-go.db r-bioc-org.hs.eg.db r-cran-runit 96s r-bioc-graph r-bioc-biocstyle r-cran-testthat r-bioc-variantannotation 96s r-bioc-experimenthub r-bioc-all r-bioc-affy r-cran-foreach r-cran-bbmisc 96s r-cran-doparallel r-bioc-shortread r-cran-batchtools r-cran-data.table 96s r-cran-mockery r-cran-webmockr r-bioc-hdf5array r-cran-lobstr 96s r-bioc-delayedmatrixstats r-cran-pheatmap r-bioc-tximportdata 96s r-bioc-glmgampoi r-cran-roxygen2 r-bioc-rhdf5 r-cran-seuratobject 96s r-bioc-ggbio r-bioc-gviz r-cran-class r-cran-r.utils r-cran-markdown 96s r-cran-biasedurn r-cran-ellipse r-cran-gplots r-bioc-sparsematrixstats 96s r-cran-covr r-bioc-bladderbatch r-bioc-fishpond r-cran-devtools r-cran-ff 96s r-cran-rstudioapi r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd 96s r-cran-shinyjs r-cran-jpeg r-cran-viridis r-cran-rmysql r-cran-lubridate 96s r-cran-magick r-cran-sf r-cran-getopt r-cran-interp r-cran-gam 96s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 96s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-spelling 96s r-cran-bench r-cran-brio r-cran-callr r-cran-here r-cran-pkgbuild 96s r-cran-pkgload r-cran-plm r-cran-zoo 96s Recommended packages: 96s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 96s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-thematic 96s r-cran-callr r-cran-covr r-cran-mockery r-cran-processx r-cran-ps 96s r-cran-rprojroot r-cran-rstudioapi r-cran-whoami r-cran-bench r-cran-brio 96s r-cran-decor r-cran-desc r-cran-lobstr r-cran-spelling r-cran-webutils 96s r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-future r-cran-testit 96s w3m | www-browser r-cran-unitizer r-cran-rsvg r-cran-pkgload r-cran-hexbin 96s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 96s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 96s r-cran-vdiffr r-cran-waldo r-cran-cairo r-cran-markdown r-cran-jpeg 96s r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl 96s r-cran-tikzdevice r-cran-webshot node-highlight.js r-cran-lintr 96s r-cran-tidyverse r-cran-r.devices r-cran-sodium r-cran-future.apply 96s r-cran-lubridate r-cran-doparallel r-cran-foreach r-cran-iterators 96s r-cran-itertools r-cran-runit r-cran-usethis r-cran-dygraphs 96s r-cran-rsconnect r-cran-downlit r-cran-dbitest r-cran-gert r-cran-gh 96s r-cran-rvest r-cran-dichromat r-cran-data.table r-cran-mockr 96s r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 96s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 96s x11-xserver-utils 97s The following packages will be REMOVED: 97s libcurl4 libpsl5 97s The following NEW packages will be installed: 97s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 97s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 97s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 97s fonts-glyphicons-halflings fonts-mathjax g++ g++-13 g++-13-s390x-linux-gnu 97s g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu 97s gfortran gfortran-13 gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu 97s icu-devtools javascript-common libasan8 libatomic1 libblas-dev libblas3 97s libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 97s libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 97s libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 97s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 libjbig0 97s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 97s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 97s libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions 97s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax 97s libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify 97s libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 97s liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 97s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 97s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 97s libpng-dev libpsl5t64 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev 97s libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 97s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6 97s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 97s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 97s r-base-core r-base-dev r-bioc-annotate r-bioc-annotationdbi 97s r-bioc-annotationfilter r-bioc-annotationhub r-bioc-biobase 97s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 97s r-bioc-biocversion r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 97s r-bioc-delayedarray r-bioc-deseq2 r-bioc-dexseq r-bioc-edger 97s r-bioc-ensembldb r-bioc-genefilter r-bioc-geneplotter r-bioc-genomeinfodb 97s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 97s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 97s r-bioc-isoformswitchanalyzer r-bioc-keggrest r-bioc-limma 97s r-bioc-matrixgenerics r-bioc-pfamanalyzer r-bioc-protgenerics r-bioc-rhtslib 97s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 97s r-bioc-saturn r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-sva 97s r-bioc-tximeta r-bioc-tximport r-bioc-xvector r-bioc-zlibbioc r-cran-abind 97s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 97s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-boot r-cran-bslib 97s r-cran-cachem r-cran-cli r-cran-clipr r-cran-codetools r-cran-colorspace 97s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl 97s r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr r-cran-dt 97s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap 97s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 97s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-ggplot2 97s r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hms 97s r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-hwriter 97s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 97s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 97s r-cran-littler r-cran-locfdr r-cran-locfit r-cran-magrittr r-cran-mass 97s r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime 97s r-cran-munsell r-cran-nlme r-cran-openssl r-cran-pbapply r-cran-pillar 97s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-plyr r-cran-png 97s r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr r-cran-r6 97s r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo 97s r-cran-rcurl r-cran-readr r-cran-reshape2 r-cran-restfulr r-cran-rjson 97s r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-sass r-cran-scales 97s r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-statmod r-cran-stringi 97s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 97s r-cran-tidyselect r-cran-tinytex r-cran-tzdb r-cran-utf8 r-cran-vctrs 97s r-cran-venndiagram r-cran-viridislite r-cran-vroom r-cran-withr r-cran-xfun 97s r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip 97s x11-common xdg-utils zip zlib1g-dev 97s The following packages will be upgraded: 97s curl 97s 1 upgraded, 304 newly installed, 2 to remove and 0 not upgraded. 97s Need to get 365 MB/365 MB of archives. 97s After this operation, 1207 MB of additional disk space will be used. 97s Get:1 /tmp/autopkgtest.PrVoJc/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [752 B] 97s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 97s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 97s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 97s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 97s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 98s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 98s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 98s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 98s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 98s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 98s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 98s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 98s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 100s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 100s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 100s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 100s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 100s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 100s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 100s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 100s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 100s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 100s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 100s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 101s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 101s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 101s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 101s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 101s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 101s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 101s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 101s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 101s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 101s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 101s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 101s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 101s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 101s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 101s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 101s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 101s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 101s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 101s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 101s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 101s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 101s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 102s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 102s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 102s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 102s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 102s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 102s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 102s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 102s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 102s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 102s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 102s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 102s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 102s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 102s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 102s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 102s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 102s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 102s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 102s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 102s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 102s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 102s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 102s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 102s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 103s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 103s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 103s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 103s Get:75 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 103s Get:76 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 103s Get:77 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 103s Get:78 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 103s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 103s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 103s Get:81 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 103s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 103s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 103s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 103s Get:85 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 103s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 103s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 103s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 103s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 103s Get:90 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 103s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 103s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 103s Get:93 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 103s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 103s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 103s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 103s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 103s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 103s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 103s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 103s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 103s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 103s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 103s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 104s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 104s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 104s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 104s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 104s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 104s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 104s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 104s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 104s Get:113 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 104s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 104s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 104s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 104s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 104s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 104s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 104s Get:120 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 104s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 104s Get:122 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 105s Get:123 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 105s Get:124 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 105s Get:125 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 105s Get:126 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 105s Get:127 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 105s Get:128 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 105s Get:129 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 107s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 107s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 107s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 107s Get:133 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 107s Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 107s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 107s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 107s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 108s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 108s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 108s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 108s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 108s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 108s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 108s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 108s Get:145 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 108s Get:146 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 108s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 108s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 108s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 108s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 108s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 108s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 108s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 108s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 108s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 108s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 108s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 108s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 108s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 108s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 108s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 108s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 108s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 108s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 108s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 108s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 108s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 108s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1build1 [794 kB] 108s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 109s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 109s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 109s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 110s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 110s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 110s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 110s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 110s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotate all 1.80.0+dfsg-1 [1730 kB] 110s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 110s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 110s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 110s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 110s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 110s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 110s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 110s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 110s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 110s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 110s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 110s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 110s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 110s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 110s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 110s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 111s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 111s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 111s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 111s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 111s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocversion all 3.18.1-1 [11.0 kB] 111s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 111s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 111s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 111s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 111s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 111s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 111s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 111s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 111s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 111s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 111s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 111s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 112s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 112s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 112s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 112s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 112s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 112s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 112s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 112s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 113s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 113s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 113s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 113s Get:222 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 113s Get:223 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 113s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 113s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 113s Get:226 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 113s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 113s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 113s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dt all 0.31+dfsg-1 [265 kB] 113s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 113s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 113s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 113s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 113s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 113s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 113s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 113s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 113s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 113s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 113s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 113s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 113s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 113s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 113s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 113s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 114s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-1 [1410 kB] 114s Get:247 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 114s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 114s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 114s Get:250 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 114s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 114s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 114s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 114s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 114s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 114s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 114s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 114s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 114s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 114s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 115s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-bsgenome all 1.70.2-1 [6975 kB] 115s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-locfit s390x 1.5-9.8-1 [511 kB] 115s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 115s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 115s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 115s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nlme s390x 3.1.164-1 [2268 kB] 115s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 115s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-farver s390x 2.1.1-1 [1347 kB] 115s Get:269 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 115s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-colorspace s390x 2.1-0+dfsg-1 [1540 kB] 115s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-munsell all 0.5.0-2build1 [208 kB] 115s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 115s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 115s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 115s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 116s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpparmadillo s390x 0.12.8.0.0-1 [869 kB] 116s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-deseq2 s390x 1.42.0+dfsg-1 [1235 kB] 116s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hwriter all 1.3.2.1-1 [106 kB] 116s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-statmod s390x 1.5.0-1 [294 kB] 116s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-geneplotter all 1.80.0+dfsg-1 [1416 kB] 116s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-survival s390x 3.5-8-1 [6161 kB] 116s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genefilter s390x 1.84.0-1 [1124 kB] 116s Get:283 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-dexseq all 1.48.0+dfsg-1 [464 kB] 116s Get:284 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-limma s390x 3.58.1+dfsg-1 [1900 kB] 116s Get:285 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-edger s390x 4.0.16+dfsg-1 [1157 kB] 116s Get:286 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 116s Get:287 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-protgenerics all 1.34.0-1 [225 kB] 116s Get:288 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 116s Get:289 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-locfdr all 1.1-8-2 [306 kB] 116s Get:290 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pbapply all 1.7-2-1 [102 kB] 116s Get:291 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-boot all 1.3-30-1 [619 kB] 116s Get:292 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-saturn all 1.10.0+dfsg-1 [2954 kB] 117s Get:293 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sva s390x 3.50.0-1 [466 kB] 117s Get:294 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB] 117s Get:295 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB] 117s Get:296 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB] 117s Get:297 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB] 117s Get:298 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-pfamanalyzer all 1.2.0+dfsg-1 [32.4 kB] 117s Get:299 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 117s Get:300 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB] 117s Get:301 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB] 117s Get:302 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-venndiagram all 1.7.3-1 [266 kB] 117s Get:303 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-tximport all 1.30.0+dfsg-1 [89.5 kB] 117s Get:304 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-tximeta all 1.20.3+dfsg-1 [502 kB] 117s Get:305 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-isoformswitchanalyzer s390x 2.2.0+ds-1 [4107 kB] 118s Preconfiguring packages ... 118s Fetched 365 MB in 21s (17.4 MB/s) 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 119s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 119s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 119s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 119s wget depends on libpsl5 (>= 0.16.0). 119s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 119s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 119s 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 119s Removing libpsl5:s390x (0.21.2-1build1) ... 119s Selecting previously unselected package libpsl5t64:s390x. 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 119s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 119s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 119s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 119s s390-tools depends on libcurl4 (>= 7.16.2). 119s 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 119s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 119s Selecting previously unselected package libcurl4t64:s390x. 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 119s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 119s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 119s Selecting previously unselected package libc-dev-bin. 119s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 119s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 119s Selecting previously unselected package linux-libc-dev:s390x. 119s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 119s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 119s Selecting previously unselected package libcrypt-dev:s390x. 119s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 119s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 119s Selecting previously unselected package libtirpc-dev:s390x. 119s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 119s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 119s Selecting previously unselected package libnsl-dev:s390x. 119s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 119s Unpacking libnsl-dev:s390x (1.3.0-3) ... 119s Selecting previously unselected package rpcsvc-proto. 119s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 119s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 119s Selecting previously unselected package libc6-dev:s390x. 119s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 119s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 119s Selecting previously unselected package libisl23:s390x. 119s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 119s Unpacking libisl23:s390x (0.26-3) ... 119s Selecting previously unselected package libmpc3:s390x. 119s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 119s Unpacking libmpc3:s390x (1.3.1-1) ... 119s Selecting previously unselected package cpp-13-s390x-linux-gnu. 119s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 119s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 119s Selecting previously unselected package cpp-13. 119s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 119s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 119s Selecting previously unselected package cpp-s390x-linux-gnu. 119s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 119s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 119s Selecting previously unselected package cpp. 119s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 119s Unpacking cpp (4:13.2.0-7ubuntu1) ... 119s Selecting previously unselected package libcc1-0:s390x. 119s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 119s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 119s Selecting previously unselected package libgomp1:s390x. 119s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 119s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 119s Selecting previously unselected package libitm1:s390x. 119s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 119s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 119s Selecting previously unselected package libatomic1:s390x. 119s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 119s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 119s Selecting previously unselected package libasan8:s390x. 119s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 119s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libubsan1:s390x. 120s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 120s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libgcc-13-dev:s390x. 120s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package gcc-13-s390x-linux-gnu. 120s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package gcc-13. 120s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package gcc-s390x-linux-gnu. 120s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 120s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 120s Selecting previously unselected package gcc. 120s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 120s Unpacking gcc (4:13.2.0-7ubuntu1) ... 120s Selecting previously unselected package libstdc++-13-dev:s390x. 120s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package g++-13-s390x-linux-gnu. 120s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-13. 121s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking g++-13 (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-s390x-linux-gnu. 121s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 121s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package g++. 121s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 121s Unpacking g++ (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package build-essential. 121s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 121s Unpacking build-essential (12.10ubuntu1) ... 121s Selecting previously unselected package dctrl-tools. 121s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 121s Unpacking dctrl-tools (2.24-3build2) ... 121s Selecting previously unselected package libfreetype6:s390x. 121s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 121s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 121s Selecting previously unselected package fonts-dejavu-mono. 121s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 121s Unpacking fonts-dejavu-mono (2.37-8) ... 121s Selecting previously unselected package fonts-dejavu-core. 121s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 121s Unpacking fonts-dejavu-core (2.37-8) ... 121s Selecting previously unselected package fontconfig-config. 121s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 121s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package libfontconfig1:s390x. 121s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 121s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package fontconfig. 121s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 121s Unpacking fontconfig (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package fonts-font-awesome. 121s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 121s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 121s Selecting previously unselected package fonts-glyphicons-halflings. 121s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 121s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 121s Selecting previously unselected package fonts-mathjax. 121s Preparing to unpack .../040-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 121s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 121s Selecting previously unselected package libgfortran5:s390x. 121s Preparing to unpack .../041-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libgfortran-13-dev:s390x. 121s Preparing to unpack .../042-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 121s Preparing to unpack .../043-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package gfortran-13. 122s Preparing to unpack .../044-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 122s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package gfortran-s390x-linux-gnu. 122s Preparing to unpack .../045-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 122s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 122s Selecting previously unselected package gfortran. 122s Preparing to unpack .../046-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 122s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 122s Selecting previously unselected package icu-devtools. 122s Preparing to unpack .../047-icu-devtools_74.2-1ubuntu1_s390x.deb ... 122s Unpacking icu-devtools (74.2-1ubuntu1) ... 122s Selecting previously unselected package javascript-common. 122s Preparing to unpack .../048-javascript-common_11+nmu1_all.deb ... 122s Unpacking javascript-common (11+nmu1) ... 122s Selecting previously unselected package libblas3:s390x. 122s Preparing to unpack .../049-libblas3_3.12.0-3_s390x.deb ... 122s Unpacking libblas3:s390x (3.12.0-3) ... 122s Selecting previously unselected package libblas-dev:s390x. 122s Preparing to unpack .../050-libblas-dev_3.12.0-3_s390x.deb ... 122s Unpacking libblas-dev:s390x (3.12.0-3) ... 122s Selecting previously unselected package libboost1.83-dev:s390x. 122s Preparing to unpack .../051-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 122s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 124s Selecting previously unselected package libboost-dev:s390x. 124s Preparing to unpack .../052-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 124s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 124s Selecting previously unselected package libbz2-dev:s390x. 124s Preparing to unpack .../053-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 124s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 124s Selecting previously unselected package libpixman-1-0:s390x. 124s Preparing to unpack .../054-libpixman-1-0_0.42.2-1_s390x.deb ... 124s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 124s Selecting previously unselected package libxcb-render0:s390x. 124s Preparing to unpack .../055-libxcb-render0_1.15-1_s390x.deb ... 124s Unpacking libxcb-render0:s390x (1.15-1) ... 124s Selecting previously unselected package libxcb-shm0:s390x. 124s Preparing to unpack .../056-libxcb-shm0_1.15-1_s390x.deb ... 124s Unpacking libxcb-shm0:s390x (1.15-1) ... 124s Selecting previously unselected package libxrender1:s390x. 124s Preparing to unpack .../057-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 124s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 124s Selecting previously unselected package libcairo2:s390x. 124s Preparing to unpack .../058-libcairo2_1.18.0-1_s390x.deb ... 124s Unpacking libcairo2:s390x (1.18.0-1) ... 124s Selecting previously unselected package libdatrie1:s390x. 124s Preparing to unpack .../059-libdatrie1_0.2.13-3_s390x.deb ... 124s Unpacking libdatrie1:s390x (0.2.13-3) ... 124s Selecting previously unselected package libdeflate0:s390x. 124s Preparing to unpack .../060-libdeflate0_1.19-1_s390x.deb ... 124s Unpacking libdeflate0:s390x (1.19-1) ... 124s Selecting previously unselected package libgraphite2-3:s390x. 124s Preparing to unpack .../061-libgraphite2-3_1.3.14-2_s390x.deb ... 124s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 124s Selecting previously unselected package libharfbuzz0b:s390x. 124s Preparing to unpack .../062-libharfbuzz0b_8.3.0-2_s390x.deb ... 124s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 124s Selecting previously unselected package x11-common. 124s Preparing to unpack .../063-x11-common_1%3a7.7+23ubuntu2_all.deb ... 124s Unpacking x11-common (1:7.7+23ubuntu2) ... 124s Selecting previously unselected package libice6:s390x. 124s Preparing to unpack .../064-libice6_2%3a1.0.10-1build2_s390x.deb ... 124s Unpacking libice6:s390x (2:1.0.10-1build2) ... 124s Selecting previously unselected package libicu-dev:s390x. 124s Preparing to unpack .../065-libicu-dev_74.2-1ubuntu1_s390x.deb ... 124s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 125s Selecting previously unselected package libjpeg-turbo8:s390x. 125s Preparing to unpack .../066-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 125s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 125s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 125s Preparing to unpack .../067-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 125s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 125s Selecting previously unselected package libjpeg8:s390x. 125s Preparing to unpack .../068-libjpeg8_8c-2ubuntu11_s390x.deb ... 125s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 125s Selecting previously unselected package libjpeg8-dev:s390x. 125s Preparing to unpack .../069-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 125s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 125s Selecting previously unselected package libjpeg-dev:s390x. 125s Preparing to unpack .../070-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 125s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 125s Selecting previously unselected package libjs-bootstrap. 125s Preparing to unpack .../071-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 125s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 125s Selecting previously unselected package libjs-popper.js. 125s Preparing to unpack .../072-libjs-popper.js_1.16.1+ds-6_all.deb ... 125s Unpacking libjs-popper.js (1.16.1+ds-6) ... 125s Selecting previously unselected package libjs-bootstrap4. 125s Preparing to unpack .../073-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 125s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 125s Selecting previously unselected package libjs-d3. 125s Preparing to unpack .../074-libjs-d3_3.5.17-4_all.deb ... 125s Unpacking libjs-d3 (3.5.17-4) ... 125s Selecting previously unselected package libjs-es5-shim. 125s Preparing 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previously unselected package libjs-sifter.js. 125s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 125s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 125s Selecting previously unselected package libjs-microplugin.js. 125s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 125s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 125s Selecting previously unselected package libjs-jquery-selectize.js. 125s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 125s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 125s Selecting previously unselected package libjs-jquery-ui. 125s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 125s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 125s Selecting previously unselected package libjs-json. 125s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 125s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 125s Selecting previously unselected package libjs-prettify. 125s Preparing to unpack .../085-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 125s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 125s Selecting previously unselected package liblapack3:s390x. 125s Preparing to unpack .../086-liblapack3_3.12.0-3_s390x.deb ... 125s Unpacking liblapack3:s390x (3.12.0-3) ... 125s Selecting previously unselected package liblapack-dev:s390x. 125s Preparing to unpack .../087-liblapack-dev_3.12.0-3_s390x.deb ... 125s Unpacking liblapack-dev:s390x (3.12.0-3) ... 125s Selecting previously unselected package liblua5.4-0:s390x. 125s Preparing to unpack .../088-liblua5.4-0_5.4.6-3_s390x.deb ... 125s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 125s Selecting previously unselected package libncurses-dev:s390x. 125s Preparing to unpack .../089-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 125s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 125s Selecting previously unselected package libthai-data. 125s Preparing to unpack .../090-libthai-data_0.1.29-2_all.deb ... 125s Unpacking libthai-data (0.1.29-2) ... 125s Selecting previously unselected package libthai0:s390x. 125s Preparing to unpack .../091-libthai0_0.1.29-2_s390x.deb ... 125s Unpacking libthai0:s390x (0.1.29-2) ... 125s Selecting previously unselected package libpango-1.0-0:s390x. 125s Preparing to unpack .../092-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 125s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 125s Selecting previously unselected package libpangoft2-1.0-0:s390x. 125s Preparing to unpack .../093-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 125s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 125s Selecting previously unselected package libpangocairo-1.0-0:s390x. 125s Preparing to unpack .../094-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 125s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 125s Selecting previously unselected package libpaper1:s390x. 125s Preparing to unpack .../095-libpaper1_1.1.29_s390x.deb ... 125s Unpacking libpaper1:s390x (1.1.29) ... 126s Selecting previously unselected package libpaper-utils. 126s Preparing to unpack .../096-libpaper-utils_1.1.29_s390x.deb ... 126s Unpacking libpaper-utils (1.1.29) ... 126s Selecting previously unselected package libpcre2-16-0:s390x. 126s Preparing to unpack .../097-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 126s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-32-0:s390x. 126s Preparing to unpack .../098-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 126s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-posix3:s390x. 126s Preparing to unpack .../099-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 126s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-dev:s390x. 126s Preparing to unpack .../100-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 126s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpkgconf3:s390x. 126s Preparing to unpack .../101-libpkgconf3_1.8.1-2_s390x.deb ... 126s Unpacking libpkgconf3:s390x (1.8.1-2) ... 126s Selecting previously unselected package zlib1g-dev:s390x. 126s Preparing to unpack .../102-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 126s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 126s Selecting previously unselected package libpng-dev:s390x. 126s Preparing to unpack .../103-libpng-dev_1.6.43-1_s390x.deb ... 126s Unpacking libpng-dev:s390x (1.6.43-1) ... 126s Selecting previously unselected package libreadline-dev:s390x. 126s Preparing to unpack .../104-libreadline-dev_8.2-3_s390x.deb ... 126s Unpacking libreadline-dev:s390x (8.2-3) ... 126s Selecting previously unselected package libsharpyuv0:s390x. 126s Preparing to unpack .../105-libsharpyuv0_1.3.2-0.4_s390x.deb ... 126s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 126s Selecting previously unselected package libsm6:s390x. 126s Preparing to unpack .../106-libsm6_2%3a1.2.3-1build2_s390x.deb ... 126s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 126s Selecting previously unselected package libtcl8.6:s390x. 126s Preparing to unpack .../107-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 126s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 126s Selecting previously unselected package libjbig0:s390x. 126s Preparing to unpack .../108-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 126s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 126s Selecting previously unselected package libwebp7:s390x. 126s Preparing to unpack .../109-libwebp7_1.3.2-0.4_s390x.deb ... 126s Unpacking libwebp7:s390x (1.3.2-0.4) ... 126s Selecting previously unselected package libtiff6:s390x. 126s Preparing to unpack .../110-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 126s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 126s Selecting previously unselected package libxft2:s390x. 126s Preparing to unpack .../111-libxft2_2.3.6-1_s390x.deb ... 126s Unpacking libxft2:s390x (2.3.6-1) ... 126s Selecting previously unselected package libxss1:s390x. 126s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build2_s390x.deb ... 126s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 126s Selecting previously unselected package libtk8.6:s390x. 126s Preparing to unpack .../113-libtk8.6_8.6.13-2_s390x.deb ... 126s Unpacking libtk8.6:s390x (8.6.13-2) ... 126s Selecting previously unselected package libxt6:s390x. 126s Preparing to unpack .../114-libxt6_1%3a1.2.1-1.1_s390x.deb ... 126s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 126s Selecting previously unselected package zip. 126s Preparing to unpack .../115-zip_3.0-13_s390x.deb ... 126s Unpacking zip (3.0-13) ... 126s Selecting previously unselected package unzip. 126s Preparing to unpack .../116-unzip_6.0-28ubuntu3_s390x.deb ... 126s Unpacking unzip (6.0-28ubuntu3) ... 126s Selecting previously unselected package xdg-utils. 126s Preparing to unpack .../117-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 126s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 126s Selecting previously unselected package r-base-core. 126s Preparing to unpack .../118-r-base-core_4.3.2-1build1_s390x.deb ... 126s Unpacking r-base-core (4.3.2-1build1) ... 126s Selecting previously unselected package r-cran-littler. 126s Preparing to unpack .../119-r-cran-littler_0.3.19-1_s390x.deb ... 126s Unpacking r-cran-littler (0.3.19-1) ... 126s Selecting previously unselected package littler. 126s Preparing to unpack .../120-littler_0.3.19-1_all.deb ... 126s Unpacking littler (0.3.19-1) ... 126s Selecting previously unselected package node-bootstrap-sass. 126s Preparing to unpack .../121-node-bootstrap-sass_3.4.3-2_all.deb ... 126s Unpacking node-bootstrap-sass (3.4.3-2) ... 127s Selecting previously unselected package node-html5shiv. 127s Preparing to unpack .../122-node-html5shiv_3.7.3+dfsg-5_all.deb ... 127s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 127s Selecting previously unselected package node-normalize.css. 127s Preparing to unpack .../123-node-normalize.css_8.0.1-5_all.deb ... 127s Unpacking node-normalize.css (8.0.1-5) ... 127s Selecting previously unselected package pandoc-data. 127s Preparing to unpack .../124-pandoc-data_3.1.3-1_all.deb ... 127s Unpacking pandoc-data (3.1.3-1) ... 127s Selecting previously unselected package pandoc. 127s Preparing to unpack .../125-pandoc_3.1.3+ds-2_s390x.deb ... 127s Unpacking pandoc (3.1.3+ds-2) ... 128s Selecting previously unselected package pkgconf-bin. 128s Preparing to unpack .../126-pkgconf-bin_1.8.1-2_s390x.deb ... 128s Unpacking pkgconf-bin (1.8.1-2) ... 128s Selecting previously unselected package pkgconf:s390x. 128s Preparing to unpack .../127-pkgconf_1.8.1-2_s390x.deb ... 128s Unpacking pkgconf:s390x (1.8.1-2) ... 128s Selecting previously unselected package pkg-config:s390x. 128s Preparing to unpack .../128-pkg-config_1.8.1-2_s390x.deb ... 128s Unpacking pkg-config:s390x (1.8.1-2) ... 128s Selecting previously unselected package liblzma-dev:s390x. 128s Preparing to unpack .../129-liblzma-dev_5.4.5-0.3_s390x.deb ... 128s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 128s Selecting previously unselected package r-base-dev. 128s Preparing to unpack .../130-r-base-dev_4.3.2-1build1_all.deb ... 128s Unpacking r-base-dev (4.3.2-1build1) ... 128s Selecting previously unselected package pkg-r-autopkgtest. 128s Preparing to unpack .../131-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 128s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 128s Selecting previously unselected package r-bioc-biocgenerics. 128s Preparing to unpack .../132-r-bioc-biocgenerics_0.48.1-2_all.deb ... 128s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 128s Selecting previously unselected package r-bioc-biobase. 128s Preparing to unpack .../133-r-bioc-biobase_2.62.0-1_s390x.deb ... 128s Unpacking r-bioc-biobase (2.62.0-1) ... 128s Selecting previously unselected package r-bioc-s4vectors. 128s Preparing to unpack .../134-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 128s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 129s Selecting previously unselected package r-bioc-iranges. 129s Preparing to unpack .../135-r-bioc-iranges_2.36.0-1_s390x.deb ... 129s Unpacking r-bioc-iranges (2.36.0-1) ... 129s Selecting previously unselected package r-cran-dbi. 129s Preparing to unpack .../136-r-cran-dbi_1.2.2-1_all.deb ... 129s Unpacking r-cran-dbi (1.2.2-1) ... 129s Selecting previously unselected package r-cran-bit. 129s Preparing to unpack .../137-r-cran-bit_4.0.5-1_s390x.deb ... 129s Unpacking r-cran-bit (4.0.5-1) ... 129s Selecting previously unselected package r-cran-bit64. 129s Preparing to unpack .../138-r-cran-bit64_4.0.5-1_s390x.deb ... 129s Unpacking r-cran-bit64 (4.0.5-1) ... 129s Selecting previously unselected package r-cran-rlang. 129s Preparing to unpack .../139-r-cran-rlang_1.1.3-1_s390x.deb ... 129s Unpacking r-cran-rlang (1.1.3-1) ... 129s Selecting previously unselected package r-cran-cli. 129s Preparing to unpack .../140-r-cran-cli_3.6.2-1_s390x.deb ... 129s Unpacking r-cran-cli (3.6.2-1) ... 129s Selecting previously unselected package r-cran-glue. 129s Preparing to unpack .../141-r-cran-glue_1.7.0-1_s390x.deb ... 129s Unpacking r-cran-glue (1.7.0-1) ... 129s Selecting previously unselected package r-cran-lifecycle. 129s Preparing to unpack .../142-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 129s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 129s Selecting previously unselected package r-cran-vctrs. 129s Preparing to unpack .../143-r-cran-vctrs_0.6.5-1_s390x.deb ... 129s Unpacking r-cran-vctrs (0.6.5-1) ... 129s Selecting previously unselected package r-cran-blob. 129s Preparing to unpack .../144-r-cran-blob_1.2.4-1_all.deb ... 129s Unpacking r-cran-blob (1.2.4-1) ... 129s Selecting previously unselected package r-cran-fastmap. 129s Preparing to unpack .../145-r-cran-fastmap_1.1.1-1_s390x.deb ... 129s Unpacking r-cran-fastmap (1.1.1-1) ... 129s Selecting previously unselected package r-cran-cachem. 129s Preparing to unpack .../146-r-cran-cachem_1.0.8-1_s390x.deb ... 129s Unpacking r-cran-cachem (1.0.8-1) ... 129s Selecting previously unselected package r-cran-memoise. 129s Preparing to unpack .../147-r-cran-memoise_2.0.1-1_all.deb ... 129s Unpacking r-cran-memoise (2.0.1-1) ... 129s Selecting previously unselected package r-cran-pkgconfig. 129s Preparing to unpack .../148-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 129s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 129s Selecting previously unselected package r-cran-plogr. 129s Preparing to unpack .../149-r-cran-plogr_0.2.0-3build1_all.deb ... 129s Unpacking r-cran-plogr (0.2.0-3build1) ... 129s Selecting previously unselected package r-cran-cpp11. 129s Preparing to unpack .../150-r-cran-cpp11_0.4.7-1_all.deb ... 129s Unpacking r-cran-cpp11 (0.4.7-1) ... 129s Selecting previously unselected package r-cran-rsqlite. 129s Preparing to unpack .../151-r-cran-rsqlite_2.3.4-1_s390x.deb ... 129s Unpacking r-cran-rsqlite (2.3.4-1) ... 129s Selecting previously unselected package r-cran-curl. 129s Preparing to unpack .../152-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 129s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 129s Selecting previously unselected package r-cran-jsonlite. 129s Preparing to unpack .../153-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 129s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 129s Selecting previously unselected package r-cran-mime. 129s Preparing to unpack .../154-r-cran-mime_0.12-1_s390x.deb ... 129s Unpacking r-cran-mime (0.12-1) ... 129s Selecting previously unselected package r-cran-sys. 129s Preparing to unpack .../155-r-cran-sys_3.4.2-1_s390x.deb ... 129s Unpacking r-cran-sys (3.4.2-1) ... 129s Selecting previously unselected package r-cran-askpass. 129s Preparing to unpack .../156-r-cran-askpass_1.2.0-1_s390x.deb ... 129s Unpacking r-cran-askpass (1.2.0-1) ... 129s Selecting previously unselected package r-cran-openssl. 129s Preparing to unpack .../157-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 129s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 129s Selecting previously unselected package r-cran-r6. 129s Preparing to unpack .../158-r-cran-r6_2.5.1-1_all.deb ... 129s Unpacking r-cran-r6 (2.5.1-1) ... 129s Selecting previously unselected package r-cran-httr. 129s Preparing to unpack .../159-r-cran-httr_1.4.7+dfsg-1_all.deb ... 129s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 129s Selecting previously unselected package r-cran-png. 129s Preparing to unpack .../160-r-cran-png_0.1-8-1_s390x.deb ... 129s Unpacking r-cran-png (0.1-8-1) ... 129s Selecting previously unselected package r-bioc-zlibbioc. 129s Preparing to unpack .../161-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 129s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 129s Selecting previously unselected package r-bioc-xvector. 129s Preparing to unpack .../162-r-bioc-xvector_0.42.0-1_s390x.deb ... 129s Unpacking r-bioc-xvector (0.42.0-1) ... 129s Selecting previously unselected package r-cran-bitops. 129s Preparing to unpack .../163-r-cran-bitops_1.0-7-1_s390x.deb ... 129s Unpacking r-cran-bitops (1.0-7-1) ... 129s Selecting previously unselected package r-cran-rcurl. 129s Preparing to unpack .../164-r-cran-rcurl_1.98-1.14+dfsg-1build1_s390x.deb ... 129s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 129s Selecting previously unselected package r-bioc-genomeinfodbdata. 129s Preparing to unpack .../165-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 129s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 129s Selecting previously unselected package r-bioc-genomeinfodb. 129s Preparing to unpack .../166-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 129s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 130s Selecting previously unselected package r-cran-crayon. 130s Preparing to unpack .../167-r-cran-crayon_1.5.2-1_all.deb ... 130s Unpacking r-cran-crayon (1.5.2-1) ... 130s Selecting previously unselected package r-bioc-biostrings. 130s Preparing to unpack .../168-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 130s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 130s Selecting previously unselected package r-bioc-keggrest. 130s Preparing to unpack .../169-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 130s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 130s Selecting previously unselected package r-bioc-annotationdbi. 130s Preparing to unpack .../170-r-bioc-annotationdbi_1.64.1-1_all.deb ... 130s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 130s Selecting previously unselected package r-cran-xml. 130s Preparing to unpack .../171-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 130s Unpacking r-cran-xml (3.99-0.16.1-1) ... 130s Selecting previously unselected package r-cran-xtable. 130s Preparing to unpack .../172-r-cran-xtable_1%3a1.8-4-2_all.deb ... 130s Unpacking r-cran-xtable (1:1.8-4-2) ... 130s Selecting previously unselected package r-bioc-annotate. 130s Preparing to unpack .../173-r-bioc-annotate_1.80.0+dfsg-1_all.deb ... 130s Unpacking r-bioc-annotate (1.80.0+dfsg-1) ... 130s Selecting previously unselected package r-bioc-genomicranges. 130s Preparing to unpack .../174-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 130s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 130s Selecting previously unselected package r-cran-lazyeval. 130s Preparing to unpack .../175-r-cran-lazyeval_0.2.2-1build1_s390x.deb ... 130s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 130s Selecting previously unselected package r-bioc-annotationfilter. 130s Preparing to unpack .../176-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 130s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-generics. 130s Preparing to unpack .../177-r-cran-generics_0.1.3-1_all.deb ... 130s Unpacking r-cran-generics (0.1.3-1) ... 130s Selecting previously unselected package r-cran-magrittr. 130s Preparing to unpack .../178-r-cran-magrittr_2.0.3-1_s390x.deb ... 130s Unpacking r-cran-magrittr (2.0.3-1) ... 130s Selecting previously unselected package r-cran-fansi. 130s Preparing to unpack .../179-r-cran-fansi_1.0.5-1_s390x.deb ... 130s Unpacking r-cran-fansi (1.0.5-1) ... 130s Selecting previously unselected package r-cran-utf8. 130s Preparing to unpack .../180-r-cran-utf8_1.2.4-1_s390x.deb ... 130s Unpacking r-cran-utf8 (1.2.4-1) ... 130s Selecting previously unselected package r-cran-pillar. 130s Preparing to unpack .../181-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 130s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-tibble. 130s Preparing to unpack .../182-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 130s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 130s Selecting previously unselected package r-cran-withr. 130s Preparing to unpack .../183-r-cran-withr_2.5.0-1_all.deb ... 130s Unpacking r-cran-withr (2.5.0-1) ... 130s Selecting previously unselected package r-cran-tidyselect. 130s Preparing to unpack .../184-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 130s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-dplyr. 130s Preparing to unpack .../185-r-cran-dplyr_1.1.4-1_s390x.deb ... 130s Unpacking r-cran-dplyr (1.1.4-1) ... 130s Selecting previously unselected package r-cran-purrr. 130s Preparing to unpack .../186-r-cran-purrr_1.0.2-1_s390x.deb ... 130s Unpacking r-cran-purrr (1.0.2-1) ... 130s Selecting previously unselected package r-cran-stringi. 130s Preparing to unpack .../187-r-cran-stringi_1.8.3-1_s390x.deb ... 130s Unpacking r-cran-stringi (1.8.3-1) ... 130s Selecting previously unselected package r-cran-stringr. 130s Preparing to unpack .../188-r-cran-stringr_1.5.1-1_all.deb ... 130s Unpacking r-cran-stringr (1.5.1-1) ... 130s Selecting previously unselected package r-cran-tidyr. 130s Preparing to unpack .../189-r-cran-tidyr_1.3.1-1_s390x.deb ... 130s Unpacking r-cran-tidyr (1.3.1-1) ... 130s Selecting previously unselected package r-cran-dbplyr. 130s Preparing to unpack .../190-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 130s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-filelock. 130s Preparing to unpack .../191-r-cran-filelock_1.0.3-1_s390x.deb ... 130s Unpacking r-cran-filelock (1.0.3-1) ... 130s Selecting previously unselected package r-bioc-biocfilecache. 130s Preparing to unpack .../192-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 130s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 130s Selecting previously unselected package r-cran-biocmanager. 130s Preparing to unpack .../193-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 130s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 130s Selecting previously unselected package r-bioc-biocversion. 131s Preparing to unpack .../194-r-bioc-biocversion_3.18.1-1_all.deb ... 131s Unpacking r-bioc-biocversion (3.18.1-1) ... 131s Selecting previously unselected package r-cran-rappdirs. 131s Preparing to unpack .../195-r-cran-rappdirs_0.3.3-1_s390x.deb ... 131s Unpacking r-cran-rappdirs (0.3.3-1) ... 131s Selecting previously unselected package r-cran-yaml. 131s Preparing to unpack .../196-r-cran-yaml_2.3.8-1_s390x.deb ... 131s Unpacking r-cran-yaml (2.3.8-1) ... 131s Selecting previously unselected package r-cran-pkgkitten. 131s Preparing to unpack .../197-r-cran-pkgkitten_0.2.3-1_all.deb ... 131s Unpacking r-cran-pkgkitten (0.2.3-1) ... 131s Selecting previously unselected package r-cran-rcpp. 131s Preparing to unpack .../198-r-cran-rcpp_1.0.12-1_s390x.deb ... 131s Unpacking r-cran-rcpp (1.0.12-1) ... 131s Selecting previously unselected package r-cran-later. 131s Preparing to unpack .../199-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 131s Unpacking r-cran-later (1.3.2+dfsg-1) ... 131s Selecting previously unselected package r-cran-promises. 131s Preparing to unpack .../200-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 131s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 131s Selecting previously unselected package r-cran-httpuv. 131s Preparing to unpack .../201-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 131s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 131s Selecting previously unselected package r-cran-base64enc. 131s Preparing to unpack .../202-r-cran-base64enc_0.1-3-3_s390x.deb ... 131s Unpacking r-cran-base64enc (0.1-3-3) ... 131s Selecting previously unselected package r-cran-digest. 131s Preparing to unpack .../203-r-cran-digest_0.6.34-1_s390x.deb ... 131s Unpacking r-cran-digest (0.6.34-1) ... 131s Selecting previously unselected package r-cran-ellipsis. 131s Preparing to unpack .../204-r-cran-ellipsis_0.3.2-2_s390x.deb ... 131s Unpacking r-cran-ellipsis (0.3.2-2) ... 131s Selecting previously unselected package r-cran-htmltools. 131s Preparing to unpack .../205-r-cran-htmltools_0.5.7-1_s390x.deb ... 131s Unpacking r-cran-htmltools (0.5.7-1) ... 131s Selecting previously unselected package r-cran-fontawesome. 131s Preparing to unpack .../206-r-cran-fontawesome_0.5.2-1_all.deb ... 131s Unpacking r-cran-fontawesome (0.5.2-1) ... 131s Selecting previously unselected package r-cran-sourcetools. 131s Preparing to unpack .../207-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 131s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 131s Selecting previously unselected package r-cran-commonmark. 131s Preparing to unpack .../208-r-cran-commonmark_1.9.1-1_s390x.deb ... 131s Unpacking r-cran-commonmark (1.9.1-1) ... 131s Selecting previously unselected package r-cran-jquerylib. 131s Preparing to unpack .../209-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 131s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 131s Selecting previously unselected package r-cran-fs. 131s Preparing to unpack .../210-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 131s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 131s Selecting previously unselected package r-cran-sass. 131s Preparing to unpack .../211-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 131s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 131s Selecting previously unselected package r-cran-bslib. 131s Preparing to unpack .../212-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 131s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 131s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 131s Preparing to unpack .../213-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 131s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 131s Selecting previously unselected package r-cran-shiny. 131s Preparing to unpack .../214-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 131s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-evaluate. 131s Preparing to unpack .../215-r-cran-evaluate_0.23-1_all.deb ... 131s Unpacking r-cran-evaluate (0.23-1) ... 131s Selecting previously unselected package r-cran-xfun. 131s Preparing to unpack .../216-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 131s Unpacking r-cran-xfun (0.41+dfsg-1) ... 131s Selecting previously unselected package r-cran-highr. 131s Preparing to unpack .../217-r-cran-highr_0.10+dfsg-1_all.deb ... 131s Unpacking r-cran-highr (0.10+dfsg-1) ... 131s Selecting previously unselected package libjs-mathjax. 131s Preparing to unpack .../218-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 131s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 132s Selecting previously unselected package r-cran-knitr. 132s Preparing to unpack .../219-r-cran-knitr_1.45+dfsg-1_all.deb ... 132s Unpacking r-cran-knitr (1.45+dfsg-1) ... 133s Selecting previously unselected package r-cran-tinytex. 133s Preparing to unpack .../220-r-cran-tinytex_0.49-1_all.deb ... 133s Unpacking r-cran-tinytex (0.49-1) ... 133s Selecting previously unselected package libjs-modernizr. 133s Preparing to unpack .../221-libjs-modernizr_2.6.2+ds1-5_all.deb ... 133s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 133s Selecting previously unselected package r-cran-rmarkdown. 133s Preparing to unpack .../222-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 133s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 133s Selecting previously unselected package r-cran-htmlwidgets. 133s Preparing to unpack .../223-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 133s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 133s Selecting previously unselected package r-cran-crosstalk. 133s Preparing to unpack .../224-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 133s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 133s Selecting previously unselected package r-cran-dt. 133s Preparing to unpack .../225-r-cran-dt_0.31+dfsg-1_all.deb ... 133s Unpacking r-cran-dt (0.31+dfsg-1) ... 133s Selecting previously unselected package r-bioc-interactivedisplaybase. 133s Preparing to unpack .../226-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 133s Selecting previously unselected package r-bioc-annotationhub. 133s Preparing to unpack .../227-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 133s Selecting previously unselected package r-bioc-biocio. 133s Preparing to unpack .../228-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 133s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-formatr. 133s Preparing to unpack .../229-r-cran-formatr_1.14-1_all.deb ... 133s Unpacking r-cran-formatr (1.14-1) ... 133s Selecting previously unselected package r-cran-lambda.r. 133s Preparing to unpack .../230-r-cran-lambda.r_1.2.4-2build1_all.deb ... 133s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 133s Selecting previously unselected package r-cran-futile.options. 133s Preparing to unpack .../231-r-cran-futile.options_1.0.1-3build1_all.deb ... 133s Unpacking r-cran-futile.options (1.0.1-3build1) ... 133s Selecting previously unselected package r-cran-futile.logger. 133s Preparing to unpack .../232-r-cran-futile.logger_1.4.3-4build1_all.deb ... 133s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 133s Selecting previously unselected package r-cran-snow. 133s Preparing to unpack .../233-r-cran-snow_1%3a0.4.4-2_all.deb ... 133s Unpacking r-cran-snow (1:0.4.4-2) ... 133s Selecting previously unselected package r-cran-codetools. 133s Preparing to unpack .../234-r-cran-codetools_0.2-19-1_all.deb ... 133s Unpacking r-cran-codetools (0.2-19-1) ... 133s Selecting previously unselected package r-cran-bh. 133s Preparing to unpack .../235-r-cran-bh_1.84.0-1_all.deb ... 133s Unpacking r-cran-bh (1.84.0-1) ... 133s Selecting previously unselected package r-bioc-biocparallel. 133s Preparing to unpack .../236-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 133s Unpacking r-bioc-biocparallel (1.36.0-1) ... 133s Selecting previously unselected package r-cran-hms. 133s Preparing to unpack .../237-r-cran-hms_1.1.3-1_all.deb ... 133s Unpacking r-cran-hms (1.1.3-1) ... 133s Selecting previously unselected package r-cran-prettyunits. 133s Preparing to unpack .../238-r-cran-prettyunits_1.2.0-1_all.deb ... 133s Unpacking r-cran-prettyunits (1.2.0-1) ... 133s Selecting previously unselected package r-cran-progress. 133s Preparing to unpack .../239-r-cran-progress_1.2.3-1_all.deb ... 133s Unpacking r-cran-progress (1.2.3-1) ... 133s Selecting previously unselected package r-cran-xml2. 133s Preparing to unpack .../240-r-cran-xml2_1.3.6-1_s390x.deb ... 133s Unpacking r-cran-xml2 (1.3.6-1) ... 133s Selecting previously unselected package r-bioc-biomart. 133s Preparing to unpack .../241-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 133s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 133s Selecting previously unselected package r-bioc-rhtslib. 133s Preparing to unpack .../242-r-bioc-rhtslib_2.4.1+dfsg-1_s390x.deb ... 133s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 133s Selecting previously unselected package r-bioc-rsamtools. 133s Preparing to unpack .../243-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 133s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 133s Selecting previously unselected package r-cran-matrixstats. 133s Preparing to unpack .../244-r-cran-matrixstats_1.2.0-1_s390x.deb ... 133s Unpacking r-cran-matrixstats (1.2.0-1) ... 133s Selecting previously unselected package r-bioc-matrixgenerics. 133s Preparing to unpack .../245-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 133s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 133s Selecting previously unselected package r-cran-lattice. 133s Preparing to unpack .../246-r-cran-lattice_0.22-5-1_s390x.deb ... 133s Unpacking r-cran-lattice (0.22-5-1) ... 133s Selecting previously unselected package r-cran-matrix. 133s Preparing to unpack .../247-r-cran-matrix_1.6-5-1_s390x.deb ... 133s Unpacking r-cran-matrix (1.6-5-1) ... 133s Selecting previously unselected package r-cran-abind. 133s Preparing to unpack .../248-r-cran-abind_1.4-5-2_all.deb ... 133s Unpacking r-cran-abind (1.4-5-2) ... 134s Selecting previously unselected package r-bioc-s4arrays. 134s Preparing to unpack .../249-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 134s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 134s Selecting previously unselected package r-bioc-sparsearray. 134s Preparing to unpack .../250-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 134s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 134s Selecting previously unselected package r-bioc-delayedarray. 134s Preparing to unpack .../251-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 134s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 134s Selecting previously unselected package r-bioc-summarizedexperiment. 134s Preparing to unpack .../252-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 134s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 134s Selecting previously unselected package r-bioc-genomicalignments. 134s Preparing to unpack .../253-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 134s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 134s Selecting previously unselected package r-cran-rjson. 134s Preparing to unpack .../254-r-cran-rjson_0.2.21-1_s390x.deb ... 134s Unpacking r-cran-rjson (0.2.21-1) ... 134s Selecting previously unselected package r-cran-restfulr. 134s Preparing to unpack .../255-r-cran-restfulr_0.0.15-1_s390x.deb ... 134s Unpacking r-cran-restfulr (0.0.15-1) ... 134s Selecting previously unselected package r-bioc-rtracklayer. 134s Preparing to unpack .../256-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 134s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 134s Selecting previously unselected package r-bioc-bsgenome. 134s Preparing to unpack .../257-r-bioc-bsgenome_1.70.2-1_all.deb ... 134s Unpacking r-bioc-bsgenome (1.70.2-1) ... 134s Selecting previously unselected package r-cran-locfit. 134s Preparing to unpack .../258-r-cran-locfit_1.5-9.8-1_s390x.deb ... 134s Unpacking r-cran-locfit (1.5-9.8-1) ... 134s Selecting previously unselected package r-cran-gtable. 134s Preparing to unpack .../259-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 134s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 134s Selecting previously unselected package r-cran-isoband. 134s Preparing to unpack .../260-r-cran-isoband_0.2.7-1_s390x.deb ... 134s Unpacking r-cran-isoband (0.2.7-1) ... 134s Selecting previously unselected package r-cran-mass. 134s Preparing to unpack .../261-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 134s Unpacking r-cran-mass (7.3-60.0.1-1) ... 134s Selecting previously unselected package r-cran-nlme. 134s Preparing to unpack .../262-r-cran-nlme_3.1.164-1_s390x.deb ... 134s Unpacking r-cran-nlme (3.1.164-1) ... 134s Selecting previously unselected package r-cran-mgcv. 134s Preparing to unpack .../263-r-cran-mgcv_1.9-1-1_s390x.deb ... 134s Unpacking r-cran-mgcv (1.9-1-1) ... 134s Selecting previously unselected package r-cran-farver. 134s Preparing to unpack .../264-r-cran-farver_2.1.1-1_s390x.deb ... 134s Unpacking r-cran-farver (2.1.1-1) ... 134s Selecting previously unselected package r-cran-labeling. 134s Preparing to unpack .../265-r-cran-labeling_0.4.3-1_all.deb ... 134s Unpacking r-cran-labeling (0.4.3-1) ... 134s Selecting previously unselected package r-cran-colorspace. 134s Preparing to unpack .../266-r-cran-colorspace_2.1-0+dfsg-1_s390x.deb ... 134s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 134s Selecting previously unselected package r-cran-munsell. 134s Preparing to unpack .../267-r-cran-munsell_0.5.0-2build1_all.deb ... 134s Unpacking r-cran-munsell (0.5.0-2build1) ... 134s Selecting previously unselected package r-cran-rcolorbrewer. 134s Preparing to unpack .../268-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 134s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 134s Selecting previously unselected package r-cran-viridislite. 134s Preparing to unpack .../269-r-cran-viridislite_0.4.2-2_all.deb ... 134s Unpacking r-cran-viridislite (0.4.2-2) ... 134s Selecting previously unselected package r-cran-scales. 134s Preparing to unpack .../270-r-cran-scales_1.3.0-1_all.deb ... 134s Unpacking r-cran-scales (1.3.0-1) ... 134s Selecting previously unselected package r-cran-ggplot2. 134s Preparing to unpack .../271-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 134s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 134s Selecting previously unselected package r-cran-rcpparmadillo. 134s Preparing to unpack .../272-r-cran-rcpparmadillo_0.12.8.0.0-1_s390x.deb ... 134s Unpacking r-cran-rcpparmadillo (0.12.8.0.0-1) ... 135s Selecting previously unselected package r-bioc-deseq2. 135s Preparing to unpack .../273-r-bioc-deseq2_1.42.0+dfsg-1_s390x.deb ... 135s Unpacking r-bioc-deseq2 (1.42.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-hwriter. 135s Preparing to unpack .../274-r-cran-hwriter_1.3.2.1-1_all.deb ... 135s Unpacking r-cran-hwriter (1.3.2.1-1) ... 135s Selecting previously unselected package r-cran-statmod. 135s Preparing to unpack .../275-r-cran-statmod_1.5.0-1_s390x.deb ... 135s Unpacking r-cran-statmod (1.5.0-1) ... 135s Selecting previously unselected package r-bioc-geneplotter. 135s Preparing to unpack .../276-r-bioc-geneplotter_1.80.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-geneplotter (1.80.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-survival. 135s Preparing to unpack .../277-r-cran-survival_3.5-8-1_s390x.deb ... 135s Unpacking r-cran-survival (3.5-8-1) ... 135s Selecting previously unselected package r-bioc-genefilter. 135s Preparing to unpack .../278-r-bioc-genefilter_1.84.0-1_s390x.deb ... 135s Unpacking r-bioc-genefilter (1.84.0-1) ... 135s Selecting previously unselected package r-bioc-dexseq. 135s Preparing to unpack .../279-r-bioc-dexseq_1.48.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-dexseq (1.48.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-limma. 135s Preparing to unpack .../280-r-bioc-limma_3.58.1+dfsg-1_s390x.deb ... 135s Unpacking r-bioc-limma (3.58.1+dfsg-1) ... 135s Selecting previously unselected package r-bioc-edger. 135s Preparing to unpack .../281-r-bioc-edger_4.0.16+dfsg-1_s390x.deb ... 135s Unpacking r-bioc-edger (4.0.16+dfsg-1) ... 135s Selecting previously unselected package r-bioc-genomicfeatures. 135s Preparing to unpack .../282-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 135s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 135s Selecting previously unselected package r-bioc-protgenerics. 135s Preparing to unpack .../283-r-bioc-protgenerics_1.34.0-1_all.deb ... 135s Unpacking r-bioc-protgenerics (1.34.0-1) ... 135s Selecting previously unselected package r-bioc-ensembldb. 135s Preparing to unpack .../284-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-locfdr. 135s Preparing to unpack .../285-r-cran-locfdr_1.1-8-2_all.deb ... 135s Unpacking r-cran-locfdr (1.1-8-2) ... 135s Selecting previously unselected package r-cran-pbapply. 135s Preparing to unpack .../286-r-cran-pbapply_1.7-2-1_all.deb ... 135s Unpacking r-cran-pbapply (1.7-2-1) ... 135s Selecting previously unselected package r-cran-boot. 135s Preparing to unpack .../287-r-cran-boot_1.3-30-1_all.deb ... 135s Unpacking r-cran-boot (1.3-30-1) ... 135s Selecting previously unselected package r-bioc-saturn. 135s Preparing to unpack .../288-r-bioc-saturn_1.10.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-saturn (1.10.0+dfsg-1) ... 135s Selecting previously unselected package r-bioc-sva. 135s Preparing to unpack .../289-r-bioc-sva_3.50.0-1_s390x.deb ... 135s Unpacking r-bioc-sva (3.50.0-1) ... 135s Selecting previously unselected package r-cran-clipr. 135s Preparing to unpack .../290-r-cran-clipr_0.8.0-1_all.deb ... 135s Unpacking r-cran-clipr (0.8.0-1) ... 135s Selecting previously unselected package r-cran-tzdb. 135s Preparing to unpack .../291-r-cran-tzdb_0.4.0-2_s390x.deb ... 135s Unpacking r-cran-tzdb (0.4.0-2) ... 135s Selecting previously unselected package r-cran-vroom. 135s Preparing to unpack .../292-r-cran-vroom_1.6.5-1_s390x.deb ... 135s Unpacking r-cran-vroom (1.6.5-1) ... 135s Selecting previously unselected package r-cran-readr. 135s Preparing to unpack .../293-r-cran-readr_2.1.5-1_s390x.deb ... 135s Unpacking r-cran-readr (2.1.5-1) ... 135s Selecting previously unselected package r-bioc-pfamanalyzer. 135s Preparing to unpack .../294-r-bioc-pfamanalyzer_1.2.0+dfsg-1_all.deb ... 135s Unpacking r-bioc-pfamanalyzer (1.2.0+dfsg-1) ... 135s Selecting previously unselected package r-cran-plyr. 135s Preparing to unpack .../295-r-cran-plyr_1.8.9-1_s390x.deb ... 135s Unpacking r-cran-plyr (1.8.9-1) ... 135s Selecting previously unselected package r-cran-reshape2. 135s Preparing to unpack .../296-r-cran-reshape2_1.4.4-2build1_s390x.deb ... 135s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 135s Selecting previously unselected package r-cran-gridextra. 135s Preparing to unpack .../297-r-cran-gridextra_2.3-3build1_all.deb ... 135s Unpacking r-cran-gridextra (2.3-3build1) ... 136s Selecting previously unselected package r-cran-venndiagram. 136s Preparing to unpack .../298-r-cran-venndiagram_1.7.3-1_all.deb ... 136s Unpacking r-cran-venndiagram (1.7.3-1) ... 136s Selecting previously unselected package r-bioc-tximport. 136s Preparing to unpack .../299-r-bioc-tximport_1.30.0+dfsg-1_all.deb ... 136s Unpacking r-bioc-tximport (1.30.0+dfsg-1) ... 136s Selecting previously unselected package r-bioc-tximeta. 136s Preparing to unpack .../300-r-bioc-tximeta_1.20.3+dfsg-1_all.deb ... 136s Unpacking r-bioc-tximeta (1.20.3+dfsg-1) ... 136s Selecting previously unselected package r-bioc-isoformswitchanalyzer. 136s Preparing to unpack .../301-r-bioc-isoformswitchanalyzer_2.2.0+ds-1_s390x.deb ... 136s Unpacking r-bioc-isoformswitchanalyzer (2.2.0+ds-1) ... 136s Selecting previously unselected package autopkgtest-satdep. 136s Preparing to unpack .../302-1-autopkgtest-satdep.deb ... 136s Unpacking autopkgtest-satdep (0) ... 136s Setting up libjs-json (0~20221030+~1.0.8-1) ... 136s Setting up javascript-common (11+nmu1) ... 136s Setting up libgraphite2-3:s390x (1.3.14-2) ... 136s Setting up libpixman-1-0:s390x (0.42.2-1) 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libpaper-utils (1.1.29) ... 136s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ... 136s Setting up libjs-modernizr (2.6.2+ds1-5) ... 136s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 136s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ... 136s Setting up libjs-es5-shim (4.6.7-2) ... 136s Setting up zip (3.0-13) ... 136s Setting up libpcre2-32-0:s390x (10.42-4ubuntu1) ... 136s Setting up libblas3:s390x (3.12.0-3) ... 136s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 136s Setting up libtirpc-dev:s390x (1.3.4+ds-1build1) ... 136s Setting up libpkgconf3:s390x (1.8.1-2) ... 136s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 136s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ... 136s Setting up libjs-d3 (3.5.17-4) ... 136s Setting up fonts-dejavu-mono (2.37-8) ... 136s Setting up libmpc3:s390x (1.3.1-1) ... 136s Setting up libatomic1:s390x (14-20240303-1ubuntu1) ... 136s 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libxss1:s390x (1:1.2.3-1build2) ... 136s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 136s Setting up pandoc-data (3.1.3-1) ... 136s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 136s Setting up libisl23:s390x (0.26-3) ... 136s Setting up libc-dev-bin (2.39-0ubuntu2) ... 136s Setting up node-normalize.css (8.0.1-5) ... 136s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 136s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 136s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 136s Setting up libcc1-0:s390x (14-20240303-1ubuntu1) ... 136s Setting up libblas-dev:s390x (3.12.0-3) ... 136s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 136s Setting up dctrl-tools (2.24-3build2) ... 136s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 136s Setting up libitm1:s390x (14-20240303-1ubuntu1) ... 136s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 136s Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 136s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 136s Setting up libice6:s390x (2:1.0.10-1build2) ... 136s Setting up liblapack3:s390x (3.12.0-3) ... 136s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 136s Setting up libcurl4t64:s390x (8.5.0-2ubuntu7) ... 136s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 136s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 136s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 136s Setting up pkgconf:s390x (1.8.1-2) ... 136s Setting up libthai0:s390x (0.1.29-2) ... 136s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 136s Setting up cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 136s Setting up pandoc (3.1.3+ds-2) ... 136s Setting up liblapack-dev:s390x (3.12.0-3) ... 136s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 136s Setting up pkg-config:s390x (1.8.1-2) ... 136s Setting up libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 136s Setting up libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 136s Setting up libc6-dev:s390x (2.39-0ubuntu2) ... 136s Setting up curl (8.5.0-2ubuntu7) ... 136s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ... 136s Setting up libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 136s Setting up libsm6:s390x (2:1.2.3-1build2) ... 136s Setting up libicu-dev:s390x (74.2-1ubuntu1) ... 136s Setting up libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 136s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ... 136s Setting up fontconfig (2.15.0-1ubuntu1) ... 138s Regenerating fonts cache... done. 138s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 138s Setting up libxft2:s390x (2.3.6-1) ... 139s Setting up libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 139s Setting up libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 139s Setting up libpcre2-dev:s390x (10.42-4ubuntu1) ... 139s Setting up cpp-13 (13.2.0-17ubuntu2) ... 139s Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Setting up libtk8.6:s390x (8.6.13-2) ... 139s Setting up libpango-1.0-0:s390x (1.51.0+ds-4) ... 139s Setting up libreadline-dev:s390x (8.2-3) ... 139s Setting up libcairo2:s390x (1.18.0-1) ... 139s Setting up gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 139s Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Setting up g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 139s Setting up gcc-13 (13.2.0-17ubuntu2) ... 139s Setting up libxt6:s390x (1:1.2.1-1.1) ... 139s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 139s Setting up cpp (4:13.2.0-7ubuntu1) ... 139s Setting up gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 139s Setting up libboost-dev:s390x (1.83.0.1ubuntu2) ... 139s Setting up libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 139s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 139s Setting up libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 139s Setting up g++-13 (13.2.0-17ubuntu2) ... 139s Setting up gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Setting up libpng-dev:s390x (1.6.43-1) ... 139s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 139s Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Setting up gcc (4:13.2.0-7ubuntu1) ... 139s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 139s Setting up r-base-core (4.3.2-1build1) ... 139s 139s Creating config file /etc/R/Renviron with new version 139s Setting up r-cran-crayon (1.5.2-1) ... 139s Setting up r-cran-locfdr (1.1-8-2) ... 139s Setting up r-cran-labeling (0.4.3-1) ... 139s Setting up r-cran-sourcetools (0.1.7-1-1) ... 139s Setting up r-cran-futile.options (1.0.1-3build1) ... 139s Setting up r-cran-lattice (0.22-5-1) ... 139s Setting up r-cran-nlme (3.1.164-1) ... 139s Setting up r-cran-farver (2.1.1-1) ... 139s Setting up r-cran-formatr (1.14-1) ... 139s Setting up r-cran-pbapply (1.7-2-1) ... 139s Setting up r-cran-xml (3.99-0.16.1-1) ... 139s Setting up g++ (4:13.2.0-7ubuntu1) ... 139s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 139s Setting up r-cran-viridislite (0.4.2-2) ... 139s Setting up r-cran-locfit (1.5-9.8-1) ... 139s Setting up r-cran-statmod (1.5.0-1) ... 139s Setting up build-essential (12.10ubuntu1) ... 139s Setting up r-cran-lazyeval (0.2.2-1build1) ... 139s Setting up r-cran-clipr (0.8.0-1) ... 139s Setting up r-cran-commonmark (1.9.1-1) ... 139s Setting up r-cran-r6 (2.5.1-1) ... 139s Setting up r-cran-pkgkitten (0.2.3-1) ... 139s Setting up r-cran-magrittr (2.0.3-1) ... 139s Setting up r-cran-rappdirs (0.3.3-1) ... 139s Setting up r-cran-filelock (1.0.3-1) ... 139s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 139s Setting up r-cran-littler (0.3.19-1) ... 139s Setting up r-cran-bh (1.84.0-1) ... 139s Setting up 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149s autopkgtest [19:09:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 149s autopkgtest [19:09:21]: test pkg-r-autopkgtest: [----------------------- 149s Test: Try to load the R library IsoformSwitchAnalyzeR 149s 149s R version 4.3.2 (2023-10-31) -- "Eye Holes" 149s Copyright (C) 2023 The R Foundation for Statistical Computing 149s Platform: s390x-ibm-linux-gnu (64-bit) 149s 149s R is free software and comes with ABSOLUTELY NO WARRANTY. 149s You are welcome to redistribute it under certain conditions. 149s Type 'license()' or 'licence()' for distribution details. 149s 149s R is a collaborative project with many contributors. 149s Type 'contributors()' for more information and 149s 'citation()' on how to cite R or R packages in publications. 149s 149s Type 'demo()' for some demos, 'help()' for on-line help, or 149s 'help.start()' for an HTML browser interface to help. 149s Type 'q()' to quit R. 149s 149s > library('IsoformSwitchAnalyzeR') 149s Loading required package: limma 149s Loading required package: DEXSeq 149s Loading required package: BiocParallel 149s Loading required package: Biobase 149s Loading required package: BiocGenerics 149s 149s Attaching package: ‘BiocGenerics’ 149s 149s The following object is masked from ‘package:limma’: 149s 149s plotMA 149s 149s The following objects are masked from ‘package:stats’: 149s 149s IQR, mad, sd, var, xtabs 149s 149s The following objects are masked from ‘package:base’: 149s 149s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 149s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 149s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 149s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 149s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 149s table, tapply, union, unique, unsplit, which.max, which.min 149s 150s Welcome to Bioconductor 150s 150s Vignettes contain introductory material; view with 150s 'browseVignettes()'. To cite Bioconductor, see 150s 'citation("Biobase")', and for packages 'citation("pkgname")'. 150s 150s Loading required package: SummarizedExperiment 150s Loading required package: MatrixGenerics 150s Loading required package: matrixStats 150s 150s Attaching package: ‘matrixStats’ 150s 150s The following objects are masked from ‘package:Biobase’: 150s 150s anyMissing, rowMedians 150s 150s 150s Attaching package: ‘MatrixGenerics’ 150s 150s The following objects are masked from ‘package:matrixStats’: 150s 150s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 150s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 150s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 150s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 150s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 150s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 150s colWeightedMeans, colWeightedMedians, colWeightedSds, 150s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 150s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 150s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 150s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 150s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 150s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 150s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 150s rowWeightedSds, rowWeightedVars 150s 150s The following object is masked from ‘package:Biobase’: 150s 150s rowMedians 150s 150s Loading required package: GenomicRanges 150s Loading required package: stats4 150s Loading required package: S4Vectors 150s 150s Attaching package: ‘S4Vectors’ 150s 150s The following object is masked from ‘package:utils’: 150s 150s findMatches 150s 150s The following objects are masked from ‘package:base’: 150s 150s expand.grid, I, unname 150s 150s Loading required package: IRanges 151s Loading required package: GenomeInfoDb 155s Loading required package: DESeq2 157s Loading required package: AnnotationDbi 158s Loading required package: RColorBrewer 160s Loading required package: satuRn 160s Loading required package: sva 160s Loading required package: mgcv 160s Loading required package: nlme 160s 160s Attaching package: ‘nlme’ 160s 160s The following object is masked from ‘package:IRanges’: 160s 160s collapse 160s 160s This is mgcv 1.9-1. 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