0s autopkgtest [18:58:25]: starting date and time: 2024-03-16 18:58:25+0000 0s autopkgtest [18:58:25]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:58:25]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8l3oncx2/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-variantannotation,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-ggbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-variantannotation/1.48.1-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-6.secgroup --name adt-noble-s390x-r-bioc-ggbio-20240316-185825-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 73s autopkgtest [18:59:38]: testbed dpkg architecture: s390x 73s autopkgtest [18:59:38]: testbed apt version: 2.7.12 73s autopkgtest [18:59:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 74s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 74s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 74s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 74s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 74s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 74s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 75s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 75s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 75s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 75s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 75s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 75s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 75s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 77s Fetched 8760 kB in 2s (3854 kB/s) 77s Reading package lists... 79s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Calculating upgrade... 80s The following packages will be REMOVED: 80s libssl3 80s The following NEW packages will be installed: 80s libssl3t64 80s The following packages have been kept back: 80s curl 80s The following packages will be upgraded: 80s openssl ubuntu-minimal ubuntu-standard 80s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 80s Need to get 2680 kB of archives. 80s After this operation, 23.6 kB of additional disk space will be used. 80s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 80s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 81s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 81s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 81s Fetched 2680 kB in 1s (3970 kB/s) 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 81s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 81s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 81s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 81s wget depends on libssl3 (>= 3.0.0). 81s tnftp depends on libssl3 (>= 3.0.0). 81s tcpdump depends on libssl3 (>= 3.0.0). 81s systemd-resolved depends on libssl3 (>= 3.0.0). 81s systemd depends on libssl3 (>= 3.0.0). 81s sudo depends on libssl3 (>= 3.0.0). 81s s390-tools depends on libssl3 (>= 3.0.0). 81s rsync depends on libssl3 (>= 3.0.0). 81s python3-cryptography depends on libssl3 (>= 3.0.0). 81s openssh-server depends on libssl3 (>= 3.0.10). 81s openssh-client depends on libssl3 (>= 3.0.10). 81s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 81s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 81s libssh-4:s390x depends on libssl3 (>= 3.0.0). 81s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 81s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 81s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 81s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 81s libnvme1 depends on libssl3 (>= 3.0.0). 81s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 81s libkmod2:s390x depends on libssl3 (>= 3.0.0). 81s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 81s libcurl4:s390x depends on libssl3 (>= 3.0.0). 81s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 81s kmod depends on libssl3 (>= 3.0.0). 81s dhcpcd-base depends on libssl3 (>= 3.0.0). 81s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 81s 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 81s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 81s Selecting previously unselected package libssl3t64:s390x. 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 81s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 81s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 81s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 81s Unpacking ubuntu-minimal (1.536) over (1.535) ... 81s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 81s Unpacking ubuntu-standard (1.536) over (1.535) ... 81s Setting up ubuntu-minimal (1.536) ... 81s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 81s Setting up ubuntu-standard (1.536) ... 81s Setting up openssl (3.0.13-0ubuntu1) ... 81s Processing triggers for man-db (2.12.0-3) ... 82s Processing triggers for libc-bin (2.39-0ubuntu2) ... 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 83s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 83s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 83s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 83s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 84s Reading package lists... 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Calculating upgrade... 84s The following packages have been kept back: 84s curl 84s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 84s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 87s autopkgtest [18:59:52]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 87s autopkgtest [18:59:52]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-ggbio 89s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (dsc) [2564 B] 89s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (tar) [3252 kB] 89s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (diff) [5428 B] 89s gpgv: Signature made Fri Dec 8 14:52:19 2023 UTC 89s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 89s gpgv: issuer "tille@debian.org" 89s gpgv: Can't check signature: No public key 89s dpkg-source: warning: cannot verify inline signature for ./r-bioc-ggbio_1.50.0-1.dsc: no acceptable signature found 90s autopkgtest [18:59:55]: testing package r-bioc-ggbio version 1.50.0-1 90s autopkgtest [18:59:55]: build not needed 91s autopkgtest [18:59:56]: test pkg-r-autopkgtest: preparing testbed 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 94s Starting pkgProblemResolver with broken count: 0 94s Starting 2 pkgProblemResolver with broken count: 0 94s Done 94s The following additional packages will be installed: 94s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 94s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 94s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 94s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 94s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 94s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 94s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 94s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 94s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 94s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 94s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 94s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 94s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 94s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 94s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 94s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 94s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 94s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 94s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 94s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 94s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 94s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 94s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 94s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 94s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 94s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 94s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 94s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 94s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 94s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 94s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase 94s r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 94s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 94s r-bioc-genomicranges r-bioc-ggbio r-bioc-graph r-bioc-iranges 94s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi r-bioc-protgenerics 94s r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 94s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 94s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 94s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 94s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 94s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 94s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 94s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 94s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 94s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 94s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 94s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 94s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 94s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 94s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 94s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 94s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 94s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 94s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 94s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 94s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 94s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 94s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 94s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 94s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 94s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 94s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 94s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 94s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 94s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 94s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 94s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 94s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 94s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 94s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 94s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 94s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 94s xdg-utils zip zlib1g-dev 94s Suggested packages: 94s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 94s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 94s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 94s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 94s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 94s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 94s libboost-context1.83-dev libboost-contract1.83-dev 94s libboost-coroutine1.83-dev libboost-date-time1.83-dev 94s libboost-exception1.83-dev libboost-fiber1.83-dev 94s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 94s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 94s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 94s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 94s libboost-numpy1.83-dev libboost-program-options1.83-dev 94s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 94s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 94s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 94s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 94s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 94s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 94s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 94s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 94s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 94s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 94s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 94s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 94s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-all r-bioc-affy 94s r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 94s r-bioc-shortread r-cran-batchtools r-cran-mockery r-cran-webmockr 94s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 94s r-bioc-gviz r-bioc-annotationhub r-cran-r.utils r-bioc-edger r-cran-markdown 94s r-bioc-dexseq r-cran-sparsem r-bioc-sparsematrixstats r-bioc-limma 94s r-bioc-rhdf5 r-bioc-snpstats r-cran-roxygen2 r-cran-ff r-cran-covr 94s r-cran-aer r-cran-bbmle r-cran-boot r-cran-car r-cran-cardata r-cran-caret 94s r-cran-cmprsk r-cran-coda r-cran-e1071 r-cran-emmeans r-cran-epir r-cran-gam 94s r-cran-gee r-cran-geepack r-cran-glmnet r-cran-gmm r-cran-irlba r-cran-ks 94s r-cran-lavaan r-cran-leaps r-cran-lme4 r-cran-lmtest r-cran-lsmeans 94s r-cran-maps r-cran-mclust r-cran-metafor r-cran-modeldata r-cran-multcomp 94s r-cran-network r-cran-ordinal r-cran-plm r-cran-psych r-cran-quantreg 94s r-cran-robust r-cran-robustbase r-cran-rsample r-cran-sandwich r-cran-sp 94s r-cran-spdep r-cran-spatialreg r-cran-spelling r-cran-survey 94s r-cran-systemfit r-cran-tseries r-cran-zoo r-cran-kernsmooth r-cran-kernlab 94s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-rmysql r-cran-polyclip 94s r-cran-lubridate r-cran-scatterplot3d r-cran-magick r-cran-sf r-cran-getopt 94s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 94s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-bench 94s r-cran-here debhelper ghostscript gv | postscript-viewer perl-tk xpdf 94s | pdf-viewer xzdec hintview texlive-latex-base-doc wp2latex 94s Recommended packages: 94s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 94s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 94s r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot 94s r-cran-covr r-cran-brms r-cran-broom.mixed r-cran-cmprsk r-cran-effects 94s r-cran-emmeans r-cran-gam r-cran-gee r-cran-geepack r-cran-ggeffects 94s r-cran-glmmtmb r-cran-lavaan r-cran-lme4 r-cran-mice r-cran-ordinal 94s r-cran-parameters r-cran-plm r-cran-pscl r-cran-rstanarm r-cran-spelling 94s r-cran-survey r-cran-vgam r-cran-thematic r-cran-cliapp r-cran-mockery 94s r-cran-fastmatch r-cran-devtools r-cran-tinytest r-cran-whoami r-cran-bench 94s r-cran-decor r-cran-lobstr r-cran-webutils r-cran-r.utils r-cran-xts 94s r-cran-nanotime r-cran-zoo r-cran-rpostgresql r-cran-gh r-cran-rmysql 94s r-cran-unitizer r-cran-rsvg r-cran-geosphere r-cran-ggforce r-cran-igraph 94s r-cran-intergraph r-cran-maps r-cran-mapproj r-cran-network r-cran-sna 94s r-cran-roxygen2 r-cran-crosstalk r-cran-vdiffr r-cran-hexbin r-cran-multcomp 94s r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-sf r-cran-svglite 94s r-cran-reshape r-cran-cairo r-cran-markdown r-cran-r.rsp r-cran-gridsvg 94s r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 94s node-highlight.js r-cran-snakecase r-cran-lintr r-cran-tidyverse 94s r-cran-r.devices r-cran-sodium r-cran-gridgraphics r-cran-lubridate 94s r-cran-mathjaxr r-cran-mockr r-cran-doparallel r-cran-foreach 94s r-cran-iterators r-cran-itertools r-cran-webfakes r-cran-future r-cran-pingr 94s r-cran-runit r-cran-usethis r-cran-dygraphs r-cran-dbitest r-cran-gert 94s r-cran-rvest r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 94s lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 94s x11-utils x11-xserver-utils 94s The following packages will be REMOVED: 94s libcurl4 libpsl5 94s The following NEW packages will be installed: 94s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 94s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 94s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 94s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 94s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 94s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 94s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 94s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 94s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 94s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 94s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 94s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 94s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 94s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 94s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 94s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 94s libjs-popper.js libjs-prettify libjs-sifter.js 94s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 94s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 94s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 94s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 94s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 94s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 94s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 94s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 94s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 94s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 94s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 94s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter 94s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 94s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings 94s r-bioc-biovizbase r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb 94s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 94s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-ggbio r-bioc-graph 94s r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi 94s r-bioc-protgenerics r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 94s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 94s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 94s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 94s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 94s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 94s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 94s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 94s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 94s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 94s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 94s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 94s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 94s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 94s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 94s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 94s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 94s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 94s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 94s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 94s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 94s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 94s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 94s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 94s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 94s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 94s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 94s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 94s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 94s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 94s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 94s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 94s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 94s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 94s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 94s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 94s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 94s xdg-utils zip zlib1g-dev 94s The following packages will be upgraded: 94s curl 94s 1 upgraded, 348 newly installed, 2 to remove and 0 not upgraded. 94s Need to get 505 MB/505 MB of archives. 94s After this operation, 1516 MB of additional disk space will be used. 94s Get:1 /tmp/autopkgtest.2dM4iQ/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [752 B] 94s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 95s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 95s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 95s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 95s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 95s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 95s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 95s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 95s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 95s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 95s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 95s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 95s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 95s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 95s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 95s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 95s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 95s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 95s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 95s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 95s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 96s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 96s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 96s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 97s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 97s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 97s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 97s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 97s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 97s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 97s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 98s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 98s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 98s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 98s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 98s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 98s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 98s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 98s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 98s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 98s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 98s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 98s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 98s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 98s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 98s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 98s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 99s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 99s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 99s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 99s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 99s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 99s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 99s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 99s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 99s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 99s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 99s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 99s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 99s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 99s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 99s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 99s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 99s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 99s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 99s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 99s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 99s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 99s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 99s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 99s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 99s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 100s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 100s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 100s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 100s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 100s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 100s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 100s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 100s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 100s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 100s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 100s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 100s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 100s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 100s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 100s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 100s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 100s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 100s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 100s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 100s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 100s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 100s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 100s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 101s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 101s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 101s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 101s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 101s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 101s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 101s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 101s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 101s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 101s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 101s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 101s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 101s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 101s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 101s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 101s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 101s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 101s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 101s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 101s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 101s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 101s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 101s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 101s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 102s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 102s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 102s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 102s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 102s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 102s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 102s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 102s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 102s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 102s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 102s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 102s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 102s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 102s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 102s Get:135 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 102s Get:136 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 102s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 103s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 103s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 103s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 103s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 103s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 103s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 103s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 105s Get:145 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 105s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 105s Get:147 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 105s Get:148 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 105s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 105s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 105s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 105s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 105s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 105s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 105s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 105s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 105s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 105s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 105s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 105s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 105s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 105s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 105s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 105s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 105s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 105s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 105s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 105s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 105s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 105s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 105s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 105s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 105s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 105s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 105s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 105s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 105s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 105s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 105s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 105s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 105s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 105s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 105s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1 [794 kB] 105s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 106s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 106s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 106s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 107s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 107s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 107s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 107s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 107s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 107s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 107s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 107s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 107s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 107s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 107s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 107s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 107s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 107s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 107s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 107s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 107s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 107s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 108s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 108s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 108s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 108s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 108s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 108s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 108s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 108s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 108s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 108s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 108s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 108s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 108s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 108s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 108s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 108s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 108s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 108s Get:223 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 108s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 108s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 108s Get:226 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 108s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 108s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 108s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 108s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 108s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 108s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 109s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 109s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 109s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 109s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 109s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 109s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 109s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 109s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 109s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 109s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 109s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 109s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 109s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 109s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 109s Get:247 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 109s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 109s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 109s Get:250 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 109s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 109s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 110s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 110s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 114s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 114s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 114s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 114s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 114s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 114s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 114s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 114s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-farver s390x 2.1.1-1 [1347 kB] 114s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 114s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-colorspace s390x 2.1-0+dfsg-1 [1540 kB] 114s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-munsell all 0.5.0-2build1 [208 kB] 114s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 114s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 114s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 114s Get:269 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 114s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 114s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 114s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 114s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nlme s390x 3.1.164-1 [2268 kB] 114s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 114s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 114s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 115s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cluster s390x 2.1.6-1 [562 kB] 115s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-survival s390x 3.5-8-1 [6161 kB] 115s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rpart s390x 4.1.23-1 [667 kB] 115s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nnet s390x 7.3-19-2 [112 kB] 115s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-foreign s390x 0.8.86-1 [247 kB] 115s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB] 115s Get:283 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-data.table s390x 1.14.10+dfsg-1 [1880 kB] 115s Get:284 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-backports s390x 1.4.1-1 [101 kB] 115s Get:285 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-checkmate s390x 2.3.1-1 [716 kB] 115s Get:286 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 115s Get:287 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rstudioapi all 0.15.0-1 [277 kB] 115s Get:288 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltable all 2.4.2-1 [381 kB] 115s Get:289 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridis all 0.6.5-1 [2770 kB] 115s Get:290 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formula all 1.2-5-1 [158 kB] 115s Get:291 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-chron s390x 2.3-61-2 [186 kB] 115s Get:292 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jpeg s390x 0.1-10-1 [31.3 kB] 115s Get:293 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-deldir s390x 2.0-4-1 [271 kB] 115s Get:294 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcppeigen s390x 0.3.3.9.4-1 [1187 kB] 115s Get:295 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-interp s390x 1.1-6-1 [1465 kB] 115s Get:296 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-latticeextra all 0.6-30-1 [2198 kB] 115s Get:297 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-acepack s390x 1.4.2-1 [68.3 kB] 115s Get:298 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hmisc s390x 5.1-1-1 [3488 kB] 115s Get:299 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dichromat all 1:2.0-0.1-1 [148 kB] 115s Get:300 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 115s Get:301 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 115s Get:302 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 115s Get:303 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 115s Get:304 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 116s Get:305 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 116s Get:306 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 116s Get:307 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-1 [1410 kB] 116s Get:308 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 117s Get:309 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 117s Get:310 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 117s Get:311 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 117s Get:312 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 117s Get:313 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 117s Get:314 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-bsgenome all 1.70.2-1 [6975 kB] 117s Get:315 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-bioc-variantannotation s390x 1.48.1-1build1 [3578 kB] 118s Get:316 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-protgenerics all 1.34.0-1 [225 kB] 118s Get:317 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 118s Get:318 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biovizbase s390x 1.50.0-1 [2665 kB] 118s Get:319 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 118s Get:320 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB] 118s Get:321 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-graph s390x 1.80.0-1 [1290 kB] 118s Get:322 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rbgl s390x 1.78.0+dfsg-1 [591 kB] 118s Get:323 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-organismdbi all 1.44.0+dfsg-1 [456 kB] 118s Get:324 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 118s Get:325 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-forcats all 1.0.0-1 [369 kB] 118s Get:326 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB] 118s Get:327 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB] 118s Get:328 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB] 118s Get:329 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB] 118s Get:330 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-haven s390x 2.5.4-1 [355 kB] 118s Get:331 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labelled all 2.12.0-2 [312 kB] 118s Get:332 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-broom.helpers all 1.14.0-2 [557 kB] 118s Get:333 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-patchwork all 1.2.0-1 [3161 kB] 118s Get:334 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggstats all 0.5.1-2 [839 kB] 118s Get:335 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggally all 2.2.1-1 [2022 kB] 118s Get:336 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ggbio all 1.50.0-1 [2939 kB] 118s Get:337 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-brio s390x 1.1.4-1 [37.8 kB] 118s Get:338 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ps s390x 1.7.6-1 [313 kB] 118s Get:339 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-processx s390x 3.8.3-1 [364 kB] 118s Get:340 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-callr all 3.7.3-2 [425 kB] 118s Get:341 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 118s Get:342 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 119s Get:343 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgbuild all 1.4.3-1 [209 kB] 119s Get:344 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rprojroot all 2.0.4-1 [124 kB] 119s Get:345 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgload all 1.3.4-1 [207 kB] 119s Get:346 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 119s Get:347 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 119s Get:348 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-waldo all 0.5.2-1build1 [120 kB] 119s Get:349 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-testthat s390x 3.2.1-1 [1688 kB] 120s Preconfiguring packages ... 120s Fetched 505 MB in 25s (20.6 MB/s) 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 120s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 120s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 120s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 120s wget depends on libpsl5 (>= 0.16.0). 120s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 120s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 120s 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 120s Removing libpsl5:s390x (0.21.2-1build1) ... 120s Selecting previously unselected package libpsl5t64:s390x. 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 120s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 120s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 120s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 120s s390-tools depends on libcurl4 (>= 7.16.2). 120s 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 120s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 120s Selecting previously unselected package libcurl4t64:s390x. 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 120s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 120s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 120s Selecting previously unselected package libc-dev-bin. 120s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 120s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 120s Selecting previously unselected package linux-libc-dev:s390x. 120s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 120s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 120s Selecting previously unselected package libcrypt-dev:s390x. 120s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 120s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 120s Selecting previously unselected package libtirpc-dev:s390x. 120s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 120s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 120s Selecting previously unselected package libnsl-dev:s390x. 120s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 120s Unpacking libnsl-dev:s390x (1.3.0-3) ... 120s Selecting previously unselected package rpcsvc-proto. 120s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 120s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 120s Selecting previously unselected package libc6-dev:s390x. 120s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 120s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 120s Selecting previously unselected package libisl23:s390x. 120s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 120s Unpacking libisl23:s390x (0.26-3) ... 120s Selecting previously unselected package libmpc3:s390x. 120s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 120s Unpacking libmpc3:s390x (1.3.1-1) ... 120s Selecting previously unselected package cpp-13-s390x-linux-gnu. 120s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package cpp-13. 120s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 120s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package cpp-s390x-linux-gnu. 120s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 120s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package cpp. 121s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 121s Unpacking cpp (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package libcc1-0:s390x. 121s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libgomp1:s390x. 121s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libitm1:s390x. 121s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libatomic1:s390x. 121s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libasan8:s390x. 121s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libubsan1:s390x. 121s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 121s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 121s Selecting previously unselected package libgcc-13-dev:s390x. 121s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gcc-13-s390x-linux-gnu. 121s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gcc-13. 121s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gcc-s390x-linux-gnu. 121s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 121s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package gcc. 121s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 121s Unpacking gcc (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package libstdc++-13-dev:s390x. 121s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-13-s390x-linux-gnu. 121s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 121s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package g++-13. 122s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 122s Unpacking g++-13 (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package g++-s390x-linux-gnu. 122s Preparing to unpack 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fonts-dejavu-mono (2.37-8) ... 122s Selecting previously unselected package fonts-dejavu-core. 122s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 122s Unpacking fonts-dejavu-core (2.37-8) ... 122s Selecting previously unselected package fontconfig-config. 122s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 122s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 122s Selecting previously unselected package libfontconfig1:s390x. 122s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 122s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 122s Selecting previously unselected package fontconfig. 122s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 122s Unpacking fontconfig (2.15.0-1ubuntu1) ... 122s Selecting previously unselected package fonts-font-awesome. 122s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 122s Unpacking fonts-font-awesome 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libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 123s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 123s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package gfortran-13. 123s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 123s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 123s Selecting previously unselected package gfortran-s390x-linux-gnu. 123s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 123s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 123s Selecting previously unselected package gfortran. 123s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 123s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 123s Selecting previously unselected package icu-devtools. 123s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 123s Unpacking icu-devtools (74.2-1ubuntu1) ... 123s Selecting previously unselected package javascript-common. 123s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 123s Unpacking javascript-common (11+nmu1) ... 123s Selecting previously unselected package libio-string-perl. 123s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 123s Unpacking libio-string-perl (1.08-4) ... 123s Selecting previously unselected package liblatex-tounicode-perl. 123s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 123s Unpacking liblatex-tounicode-perl (0.54-2) ... 123s Selecting previously unselected package libbibtex-parser-perl. 123s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 123s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 123s Selecting previously unselected package libblas3:s390x. 123s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 123s Unpacking libblas3:s390x (3.12.0-3) ... 123s Selecting previously unselected package libblas-dev:s390x. 123s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 123s Unpacking libblas-dev:s390x (3.12.0-3) ... 123s Selecting previously unselected package libboost1.83-dev:s390x. 123s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 123s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 125s Selecting previously unselected package libboost-dev:s390x. 125s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 125s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 125s Selecting previously unselected package libbz2-dev:s390x. 125s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 125s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 125s Selecting previously unselected package libpixman-1-0:s390x. 125s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 125s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 125s Selecting previously unselected package libxcb-render0:s390x. 125s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 125s Unpacking libxcb-render0:s390x (1.15-1) ... 125s Selecting previously unselected package libxcb-shm0:s390x. 125s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 125s Unpacking libxcb-shm0:s390x (1.15-1) ... 125s Selecting previously unselected package libxrender1:s390x. 125s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 125s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 125s Selecting previously unselected package libcairo2:s390x. 125s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 125s Unpacking libcairo2:s390x (1.18.0-1) ... 125s Selecting previously unselected package libdatrie1:s390x. 125s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 125s Unpacking libdatrie1:s390x (0.2.13-3) ... 125s Selecting previously unselected package libdeflate0:s390x. 125s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 125s Unpacking libdeflate0:s390x (1.19-1) ... 125s Selecting previously unselected package libgraphite2-3:s390x. 125s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 125s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 125s Selecting previously unselected package libharfbuzz0b:s390x. 125s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 125s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 125s Selecting previously unselected package x11-common. 125s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 125s Unpacking x11-common (1:7.7+23ubuntu2) ... 125s Selecting previously unselected package libice6:s390x. 125s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 125s Unpacking libice6:s390x (2:1.0.10-1build2) ... 125s Selecting previously unselected package libicu-dev:s390x. 125s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 125s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 126s Selecting previously unselected package libjpeg-turbo8:s390x. 126s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 126s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 126s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 126s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 126s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 126s Selecting previously unselected package libjpeg8:s390x. 126s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 126s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 126s Selecting previously unselected package libjpeg8-dev:s390x. 126s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 126s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 126s Selecting previously unselected package libjpeg-dev:s390x. 126s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 126s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 126s Selecting previously unselected package libjs-bootstrap. 126s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 126s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 126s Selecting previously unselected package libjs-popper.js. 126s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 126s Unpacking libjs-popper.js (1.16.1+ds-6) ... 126s Selecting previously unselected package libjs-bootstrap4. 126s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 126s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 126s Selecting previously unselected package libjs-d3. 126s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 126s Unpacking libjs-d3 (3.5.17-4) ... 126s Selecting previously unselected package libjs-es5-shim. 126s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 126s Unpacking libjs-es5-shim (4.6.7-2) ... 126s Selecting previously unselected package libjs-highlight.js. 126s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 126s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 126s Selecting previously unselected package libjs-jquery. 126s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 126s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 126s Selecting previously unselected package libjs-jquery-datatables. 126s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 126s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 126s Selecting previously unselected package libjs-sifter.js. 126s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 126s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 126s Selecting previously unselected package libjs-microplugin.js. 126s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 126s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 126s Selecting previously unselected package libjs-jquery-selectize.js. 126s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb 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(2023.20230311.66589-9) ... 126s Selecting previously unselected package liblapack3:s390x. 126s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 126s Unpacking liblapack3:s390x (3.12.0-3) ... 126s Selecting previously unselected package liblapack-dev:s390x. 126s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 126s Unpacking liblapack-dev:s390x (3.12.0-3) ... 127s Selecting previously unselected package liblua5.4-0:s390x. 127s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 127s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 127s Selecting previously unselected package libncurses-dev:s390x. 127s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 127s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 127s Selecting previously unselected package libthai-data. 127s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 127s Unpacking libthai-data (0.1.29-2) ... 127s Selecting previously unselected package libthai0:s390x. 127s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 127s Unpacking libthai0:s390x (0.1.29-2) ... 127s Selecting previously unselected package libpango-1.0-0:s390x. 127s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 127s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 127s Selecting previously unselected package libpangoft2-1.0-0:s390x. 127s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 127s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 127s Selecting previously unselected package libpangocairo-1.0-0:s390x. 127s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 127s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 127s Selecting previously unselected package libpaper1:s390x. 127s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 127s Unpacking libpaper1:s390x (1.1.29) ... 127s Selecting previously unselected package libpaper-utils. 127s Preparing to unpack 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.../106-libpkgconf3_1.8.1-2_s390x.deb ... 127s Unpacking libpkgconf3:s390x (1.8.1-2) ... 127s Selecting previously unselected package zlib1g-dev:s390x. 127s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 127s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 127s Selecting previously unselected package libpng-dev:s390x. 127s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 127s Unpacking libpng-dev:s390x (1.6.43-1) ... 127s Selecting previously unselected package libpotrace0:s390x. 127s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 127s Unpacking libpotrace0:s390x (1.16-2) ... 127s Selecting previously unselected package libptexenc1:s390x. 127s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 127s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 127s Selecting previously unselected package libreadline-dev:s390x. 127s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 127s Unpacking libreadline-dev:s390x (8.2-3) ... 127s Selecting previously unselected package libsharpyuv0:s390x. 127s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 127s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 127s Selecting previously unselected package libsm6:s390x. 127s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 127s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 127s Selecting previously unselected package libsynctex2:s390x. 127s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 127s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 127s Selecting previously unselected package libtcl8.6:s390x. 127s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 127s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 127s Selecting previously unselected package libteckit0:s390x. 127s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 127s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 127s Selecting previously unselected package libtexlua53-5:s390x. 127s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 127s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 127s Selecting previously unselected package libjbig0:s390x. 127s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 127s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 127s Selecting previously unselected package libwebp7:s390x. 127s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 127s Unpacking libwebp7:s390x (1.3.2-0.4) ... 127s Selecting previously unselected package libtiff6:s390x. 127s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 127s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 127s Selecting previously unselected package libxft2:s390x. 127s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 127s Unpacking libxft2:s390x (2.3.6-1) ... 127s Selecting previously unselected package libxss1:s390x. 127s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 127s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 127s Selecting previously unselected package libtk8.6:s390x. 127s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 127s Unpacking libtk8.6:s390x (8.6.13-2) ... 127s Selecting previously unselected package libxt6:s390x. 127s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 127s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 127s Selecting previously unselected package libxmu6:s390x. 127s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 127s Unpacking libxmu6:s390x (2:1.1.3-3) ... 127s Selecting previously unselected package libxpm4:s390x. 127s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 127s Unpacking libxpm4:s390x (1:3.5.17-1) ... 127s Selecting previously unselected package libxaw7:s390x. 127s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 127s Unpacking libxaw7:s390x (2:1.0.14-1) ... 127s Selecting previously unselected package libxi6:s390x. 127s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 127s Unpacking libxi6:s390x (2:1.8.1-1) ... 127s Selecting previously unselected package libzzip-0-13:s390x. 127s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 127s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 127s Selecting previously unselected package zip. 127s Preparing to unpack .../130-zip_3.0-13_s390x.deb ... 127s Unpacking zip (3.0-13) ... 127s Selecting previously unselected package unzip. 127s Preparing to unpack .../131-unzip_6.0-28ubuntu3_s390x.deb ... 127s Unpacking unzip (6.0-28ubuntu3) ... 127s Selecting previously unselected package xdg-utils. 127s Preparing to unpack .../132-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 127s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 127s Selecting previously unselected package r-base-core. 127s Preparing to unpack .../133-r-base-core_4.3.2-1build1_s390x.deb ... 127s Unpacking r-base-core (4.3.2-1build1) ... 128s Selecting previously unselected package r-cran-littler. 128s Preparing to unpack .../134-r-cran-littler_0.3.19-1_s390x.deb ... 128s Unpacking r-cran-littler (0.3.19-1) ... 128s Selecting previously unselected package littler. 128s Preparing to unpack .../135-littler_0.3.19-1_all.deb ... 128s Unpacking littler (0.3.19-1) ... 128s Selecting previously unselected package node-bootstrap-sass. 128s Preparing to unpack .../136-node-bootstrap-sass_3.4.3-2_all.deb ... 128s Unpacking node-bootstrap-sass (3.4.3-2) ... 128s Selecting previously unselected package node-html5shiv. 128s Preparing to unpack .../137-node-html5shiv_3.7.3+dfsg-5_all.deb ... 128s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 128s Selecting previously unselected package node-normalize.css. 128s Preparing to unpack .../138-node-normalize.css_8.0.1-5_all.deb ... 128s Unpacking node-normalize.css (8.0.1-5) ... 128s Selecting previously unselected package pandoc-data. 128s Preparing to unpack .../139-pandoc-data_3.1.3-1_all.deb ... 128s Unpacking pandoc-data (3.1.3-1) ... 128s Selecting previously unselected package pandoc. 128s Preparing to unpack .../140-pandoc_3.1.3+ds-2_s390x.deb ... 128s Unpacking pandoc (3.1.3+ds-2) ... 130s Selecting previously unselected package pkgconf-bin. 130s Preparing to unpack .../141-pkgconf-bin_1.8.1-2_s390x.deb ... 130s Unpacking pkgconf-bin (1.8.1-2) ... 130s Selecting previously unselected package pkgconf:s390x. 130s Preparing to unpack .../142-pkgconf_1.8.1-2_s390x.deb ... 130s Unpacking pkgconf:s390x (1.8.1-2) ... 130s Selecting previously unselected package pkg-config:s390x. 130s Preparing to unpack .../143-pkg-config_1.8.1-2_s390x.deb ... 130s Unpacking pkg-config:s390x (1.8.1-2) ... 130s Selecting previously unselected package liblzma-dev:s390x. 130s Preparing to unpack .../144-liblzma-dev_5.4.5-0.3_s390x.deb ... 130s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 130s Selecting previously unselected package r-base-dev. 130s Preparing to unpack .../145-r-base-dev_4.3.2-1build1_all.deb ... 130s Unpacking r-base-dev (4.3.2-1build1) ... 130s Selecting previously unselected package pkg-r-autopkgtest. 130s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 130s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 130s Selecting previously unselected package r-bioc-biocgenerics. 130s Preparing to unpack .../147-r-bioc-biocgenerics_0.48.1-2_all.deb ... 130s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 130s Selecting previously unselected package r-bioc-biobase. 130s Preparing to unpack .../148-r-bioc-biobase_2.62.0-1_s390x.deb ... 130s Unpacking r-bioc-biobase (2.62.0-1) ... 130s Selecting previously unselected package r-bioc-s4vectors. 130s Preparing to unpack .../149-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 130s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 130s Selecting previously unselected package r-bioc-iranges. 130s Preparing to unpack .../150-r-bioc-iranges_2.36.0-1_s390x.deb ... 130s Unpacking r-bioc-iranges (2.36.0-1) ... 130s Selecting previously unselected package r-cran-dbi. 130s Preparing to unpack .../151-r-cran-dbi_1.2.2-1_all.deb ... 130s Unpacking r-cran-dbi (1.2.2-1) ... 130s Selecting previously unselected package r-cran-bit. 130s Preparing to unpack .../152-r-cran-bit_4.0.5-1_s390x.deb ... 130s Unpacking r-cran-bit (4.0.5-1) ... 130s Selecting previously unselected package r-cran-bit64. 130s Preparing to unpack .../153-r-cran-bit64_4.0.5-1_s390x.deb ... 130s Unpacking r-cran-bit64 (4.0.5-1) ... 130s Selecting previously unselected package r-cran-rlang. 130s Preparing to unpack .../154-r-cran-rlang_1.1.3-1_s390x.deb ... 130s Unpacking r-cran-rlang (1.1.3-1) ... 130s Selecting previously unselected package r-cran-cli. 130s Preparing to unpack .../155-r-cran-cli_3.6.2-1_s390x.deb ... 130s Unpacking r-cran-cli (3.6.2-1) ... 130s Selecting previously unselected package r-cran-glue. 130s Preparing to unpack .../156-r-cran-glue_1.7.0-1_s390x.deb ... 130s Unpacking r-cran-glue (1.7.0-1) ... 130s Selecting previously unselected package r-cran-lifecycle. 130s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 130s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 130s Selecting previously unselected package r-cran-vctrs. 130s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_s390x.deb ... 130s Unpacking r-cran-vctrs (0.6.5-1) ... 130s Selecting previously unselected package r-cran-blob. 130s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 130s Unpacking r-cran-blob (1.2.4-1) ... 130s Selecting previously unselected package r-cran-fastmap. 130s Preparing to unpack .../160-r-cran-fastmap_1.1.1-1_s390x.deb ... 130s Unpacking r-cran-fastmap (1.1.1-1) ... 130s Selecting previously unselected package r-cran-cachem. 130s Preparing to unpack .../161-r-cran-cachem_1.0.8-1_s390x.deb ... 130s Unpacking r-cran-cachem (1.0.8-1) ... 130s Selecting previously unselected package r-cran-memoise. 130s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 130s Unpacking r-cran-memoise (2.0.1-1) ... 130s Selecting previously unselected package r-cran-pkgconfig. 130s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 130s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 130s Selecting previously unselected package r-cran-plogr. 130s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 130s Unpacking r-cran-plogr (0.2.0-3build1) ... 130s Selecting previously unselected package r-cran-cpp11. 130s Preparing to unpack .../165-r-cran-cpp11_0.4.7-1_all.deb ... 130s Unpacking r-cran-cpp11 (0.4.7-1) ... 130s Selecting previously unselected package r-cran-rsqlite. 130s Preparing to unpack .../166-r-cran-rsqlite_2.3.4-1_s390x.deb ... 130s Unpacking r-cran-rsqlite (2.3.4-1) ... 130s Selecting previously unselected package r-cran-curl. 130s Preparing to unpack .../167-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 130s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-jsonlite. 130s Preparing to unpack .../168-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 130s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 130s Selecting previously unselected package r-cran-mime. 130s Preparing to unpack .../169-r-cran-mime_0.12-1_s390x.deb ... 130s Unpacking r-cran-mime (0.12-1) ... 130s Selecting previously unselected package r-cran-sys. 130s Preparing to unpack .../170-r-cran-sys_3.4.2-1_s390x.deb ... 130s Unpacking r-cran-sys (3.4.2-1) ... 130s Selecting previously unselected package r-cran-askpass. 130s Preparing to unpack .../171-r-cran-askpass_1.2.0-1_s390x.deb ... 130s Unpacking r-cran-askpass (1.2.0-1) ... 131s Selecting previously unselected package r-cran-openssl. 131s Preparing to unpack .../172-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 131s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 131s Selecting previously unselected package r-cran-r6. 131s Preparing to unpack .../173-r-cran-r6_2.5.1-1_all.deb ... 131s Unpacking r-cran-r6 (2.5.1-1) ... 131s Selecting previously unselected package r-cran-httr. 131s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 131s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 131s Selecting previously unselected package r-cran-png. 131s Preparing to unpack .../175-r-cran-png_0.1-8-1_s390x.deb ... 131s Unpacking r-cran-png (0.1-8-1) ... 131s Selecting previously unselected package r-bioc-zlibbioc. 131s Preparing to unpack .../176-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 131s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 131s Selecting previously unselected package r-bioc-xvector. 131s Preparing to unpack .../177-r-bioc-xvector_0.42.0-1_s390x.deb ... 131s Unpacking r-bioc-xvector (0.42.0-1) ... 131s Selecting previously unselected package r-cran-bitops. 131s Preparing to unpack .../178-r-cran-bitops_1.0-7-1_s390x.deb ... 131s Unpacking r-cran-bitops (1.0-7-1) ... 131s Selecting previously unselected package r-cran-rcurl. 131s Preparing to unpack .../179-r-cran-rcurl_1.98-1.14+dfsg-1_s390x.deb ... 131s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 131s Selecting previously unselected package r-bioc-genomeinfodbdata. 131s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 131s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 131s Selecting previously unselected package r-bioc-genomeinfodb. 131s Preparing to unpack .../181-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 131s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 131s Selecting previously unselected package r-cran-crayon. 131s Preparing to unpack .../182-r-cran-crayon_1.5.2-1_all.deb ... 131s Unpacking r-cran-crayon (1.5.2-1) ... 131s Selecting previously unselected package r-bioc-biostrings. 131s Preparing to unpack .../183-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 131s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 131s Selecting previously unselected package r-bioc-keggrest. 131s Preparing to unpack .../184-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 131s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 131s Selecting previously unselected package r-bioc-annotationdbi. 131s Preparing to unpack .../185-r-bioc-annotationdbi_1.64.1-1_all.deb ... 131s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 131s Selecting previously unselected package r-bioc-genomicranges. 131s Preparing to unpack .../186-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 131s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 131s Selecting previously unselected package r-cran-lazyeval. 131s Preparing to unpack .../187-r-cran-lazyeval_0.2.2-1build1_s390x.deb ... 131s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 131s Selecting previously unselected package r-bioc-annotationfilter. 131s Preparing to unpack .../188-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 131s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-generics. 131s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 131s Unpacking r-cran-generics (0.1.3-1) ... 131s Selecting previously unselected package r-cran-magrittr. 131s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_s390x.deb ... 131s Unpacking r-cran-magrittr (2.0.3-1) ... 131s Selecting previously unselected package r-cran-fansi. 131s Preparing to unpack .../191-r-cran-fansi_1.0.5-1_s390x.deb ... 131s Unpacking r-cran-fansi (1.0.5-1) ... 131s Selecting previously unselected package r-cran-utf8. 131s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_s390x.deb ... 131s Unpacking r-cran-utf8 (1.2.4-1) ... 131s Selecting previously unselected package r-cran-pillar. 131s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 131s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-tibble. 131s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 131s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 131s Selecting previously unselected package r-cran-withr. 131s Preparing to unpack .../195-r-cran-withr_2.5.0-1_all.deb ... 131s Unpacking r-cran-withr (2.5.0-1) ... 131s Selecting previously unselected package r-cran-tidyselect. 131s Preparing to unpack .../196-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 131s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-dplyr. 131s Preparing to unpack .../197-r-cran-dplyr_1.1.4-1_s390x.deb ... 131s Unpacking r-cran-dplyr (1.1.4-1) ... 132s Selecting previously unselected package r-cran-purrr. 132s Preparing to unpack .../198-r-cran-purrr_1.0.2-1_s390x.deb ... 132s Unpacking r-cran-purrr (1.0.2-1) ... 132s Selecting previously unselected package r-cran-stringi. 132s Preparing to unpack .../199-r-cran-stringi_1.8.3-1_s390x.deb ... 132s Unpacking r-cran-stringi (1.8.3-1) ... 132s Selecting previously unselected package r-cran-stringr. 132s Preparing to unpack .../200-r-cran-stringr_1.5.1-1_all.deb ... 132s Unpacking r-cran-stringr (1.5.1-1) ... 132s Selecting previously unselected package r-cran-tidyr. 132s Preparing to unpack .../201-r-cran-tidyr_1.3.1-1_s390x.deb ... 132s Unpacking r-cran-tidyr (1.3.1-1) ... 132s Selecting previously unselected package r-cran-dbplyr. 132s Preparing to unpack .../202-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 132s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 132s Selecting previously unselected package r-cran-filelock. 132s Preparing to unpack .../203-r-cran-filelock_1.0.3-1_s390x.deb ... 132s Unpacking r-cran-filelock (1.0.3-1) ... 132s Selecting previously unselected package r-bioc-biocfilecache. 132s Preparing to unpack .../204-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 132s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 132s Selecting previously unselected package r-bioc-biocio. 132s Preparing to unpack .../205-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 132s Selecting previously unselected package r-cran-formatr. 132s Preparing to unpack .../206-r-cran-formatr_1.14-1_all.deb ... 132s Unpacking r-cran-formatr (1.14-1) ... 132s Selecting previously unselected package r-cran-lambda.r. 132s Preparing to unpack .../207-r-cran-lambda.r_1.2.4-2build1_all.deb ... 132s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 132s Selecting previously unselected package r-cran-futile.options. 132s Preparing to unpack .../208-r-cran-futile.options_1.0.1-3build1_all.deb ... 132s Unpacking r-cran-futile.options (1.0.1-3build1) ... 132s Selecting previously unselected package r-cran-futile.logger. 132s Preparing to unpack .../209-r-cran-futile.logger_1.4.3-4build1_all.deb ... 132s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 132s Selecting previously unselected package r-cran-snow. 132s Preparing to unpack .../210-r-cran-snow_1%3a0.4.4-2_all.deb ... 132s Unpacking r-cran-snow (1:0.4.4-2) ... 132s Selecting previously unselected package r-cran-codetools. 132s Preparing to unpack .../211-r-cran-codetools_0.2-19-1_all.deb ... 132s Unpacking r-cran-codetools (0.2-19-1) ... 132s Selecting previously unselected package r-cran-bh. 132s Preparing to unpack .../212-r-cran-bh_1.84.0-1_all.deb ... 132s Unpacking r-cran-bh (1.84.0-1) ... 132s Selecting previously unselected package r-bioc-biocparallel. 132s Preparing to unpack .../213-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 132s Unpacking r-bioc-biocparallel (1.36.0-1) ... 132s Selecting previously unselected package r-cran-base64enc. 132s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3_s390x.deb ... 132s Unpacking r-cran-base64enc (0.1-3-3) ... 132s Selecting previously unselected package r-cran-digest. 132s Preparing to unpack .../215-r-cran-digest_0.6.34-1_s390x.deb ... 132s Unpacking r-cran-digest (0.6.34-1) ... 132s Selecting previously unselected package r-cran-ellipsis. 132s Preparing to unpack .../216-r-cran-ellipsis_0.3.2-2_s390x.deb ... 132s Unpacking r-cran-ellipsis (0.3.2-2) ... 132s Selecting previously unselected package r-cran-htmltools. 132s Preparing to unpack .../217-r-cran-htmltools_0.5.7-1_s390x.deb ... 132s Unpacking r-cran-htmltools (0.5.7-1) ... 132s Selecting previously unselected package r-cran-evaluate. 132s Preparing to unpack .../218-r-cran-evaluate_0.23-1_all.deb ... 132s Unpacking r-cran-evaluate (0.23-1) ... 132s Selecting previously unselected package r-cran-xfun. 132s Preparing to unpack .../219-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 132s Unpacking r-cran-xfun (0.41+dfsg-1) ... 132s Selecting previously unselected package r-cran-highr. 132s Preparing to unpack .../220-r-cran-highr_0.10+dfsg-1_all.deb ... 132s Unpacking r-cran-highr (0.10+dfsg-1) ... 132s Selecting previously unselected package r-cran-yaml. 132s Preparing to unpack .../221-r-cran-yaml_2.3.8-1_s390x.deb ... 132s Unpacking r-cran-yaml (2.3.8-1) ... 132s Selecting previously unselected package libjs-mathjax. 132s Preparing to unpack .../222-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 132s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 133s Selecting previously unselected package r-cran-knitr. 133s Preparing to unpack .../223-r-cran-knitr_1.45+dfsg-1_all.deb ... 133s Unpacking r-cran-knitr (1.45+dfsg-1) ... 133s Selecting previously unselected package r-cran-jquerylib. 133s Preparing to unpack .../224-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 133s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 133s Selecting previously unselected package r-cran-fs. 133s Preparing to unpack .../225-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 133s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 133s Selecting previously unselected package r-cran-rappdirs. 133s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_s390x.deb ... 133s Unpacking r-cran-rappdirs (0.3.3-1) ... 133s Selecting previously unselected package r-cran-sass. 133s Preparing to unpack .../227-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 133s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 133s Selecting previously unselected package r-cran-bslib. 133s Preparing to unpack .../228-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 133s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 134s Selecting previously unselected package r-cran-fontawesome. 134s Preparing to unpack .../229-r-cran-fontawesome_0.5.2-1_all.deb ... 134s Unpacking r-cran-fontawesome (0.5.2-1) ... 134s Selecting previously unselected package r-cran-tinytex. 134s Preparing to unpack .../230-r-cran-tinytex_0.49-1_all.deb ... 134s Unpacking r-cran-tinytex (0.49-1) ... 134s Selecting previously unselected package libjs-modernizr. 134s Preparing to unpack .../231-libjs-modernizr_2.6.2+ds1-5_all.deb ... 134s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 134s Selecting previously unselected package r-cran-pkgkitten. 134s Preparing to unpack .../232-r-cran-pkgkitten_0.2.3-1_all.deb ... 134s Unpacking r-cran-pkgkitten (0.2.3-1) ... 134s Selecting previously unselected package r-cran-rcpp. 134s Preparing to unpack .../233-r-cran-rcpp_1.0.12-1_s390x.deb ... 134s Unpacking r-cran-rcpp (1.0.12-1) ... 134s Selecting previously unselected package r-cran-later. 134s Preparing to unpack .../234-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 134s Unpacking r-cran-later (1.3.2+dfsg-1) ... 134s Selecting previously unselected package r-cran-promises. 134s Preparing to unpack .../235-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 134s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 134s Selecting previously unselected package r-cran-httpuv. 134s Preparing to unpack .../236-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 134s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 134s Selecting previously unselected package r-cran-xtable. 134s Preparing to unpack .../237-r-cran-xtable_1%3a1.8-4-2_all.deb ... 134s Unpacking r-cran-xtable (1:1.8-4-2) ... 134s Selecting previously unselected package r-cran-sourcetools. 134s Preparing to unpack .../238-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 134s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 134s Selecting previously unselected package r-cran-commonmark. 134s Preparing to unpack .../239-r-cran-commonmark_1.9.1-1_s390x.deb ... 134s Unpacking r-cran-commonmark (1.9.1-1) ... 134s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 134s Preparing to unpack .../240-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 134s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 134s Selecting previously unselected package r-cran-shiny. 134s Preparing to unpack .../241-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 134s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 134s Selecting previously unselected package r-cran-rmarkdown. 134s Preparing to unpack .../242-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 134s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 134s Selecting previously unselected package r-cran-bookdown. 134s Preparing to unpack .../243-r-cran-bookdown_0.37+dfsg-1_all.deb ... 134s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 134s Selecting previously unselected package r-cran-biocmanager. 134s Preparing to unpack .../244-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 134s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 134s Selecting previously unselected package tex-common. 134s Preparing to unpack .../245-tex-common_6.18_all.deb ... 134s Unpacking tex-common (6.18) ... 134s Selecting previously unselected package t1utils. 134s Preparing to unpack .../246-t1utils_1.41-4build2_s390x.deb ... 134s Unpacking t1utils (1.41-4build2) ... 134s Selecting previously unselected package texlive-binaries. 134s Preparing to unpack .../247-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 134s Unpacking texlive-binaries (2023.20230311.66589-9) ... 135s Selecting previously unselected package texlive-base. 135s Preparing to unpack .../248-texlive-base_2023.20240207-1_all.deb ... 135s Unpacking texlive-base (2023.20240207-1) ... 137s Selecting previously unselected package texlive-latex-base. 137s Preparing to unpack .../249-texlive-latex-base_2023.20240207-1_all.deb ... 137s Unpacking texlive-latex-base (2023.20240207-1) ... 137s Selecting previously unselected package texlive-bibtex-extra. 137s Preparing to unpack .../250-texlive-bibtex-extra_2023.20240207-1_all.deb ... 137s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 145s Selecting previously unselected package r-bioc-biocstyle. 145s Preparing to unpack .../251-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 145s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 145s Selecting previously unselected package r-cran-xml. 145s Preparing to unpack .../252-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 145s Unpacking r-cran-xml (3.99-0.16.1-1) ... 145s Selecting previously unselected package r-cran-hms. 145s Preparing to unpack .../253-r-cran-hms_1.1.3-1_all.deb ... 145s Unpacking r-cran-hms (1.1.3-1) ... 145s Selecting previously unselected package r-cran-prettyunits. 145s Preparing to unpack .../254-r-cran-prettyunits_1.2.0-1_all.deb ... 145s Unpacking r-cran-prettyunits (1.2.0-1) ... 145s Selecting previously unselected package r-cran-progress. 145s Preparing to unpack .../255-r-cran-progress_1.2.3-1_all.deb ... 145s Unpacking r-cran-progress (1.2.3-1) ... 145s Selecting previously unselected package r-cran-xml2. 145s Preparing to unpack .../256-r-cran-xml2_1.3.6-1_s390x.deb ... 145s Unpacking r-cran-xml2 (1.3.6-1) ... 145s Selecting previously unselected package r-bioc-biomart. 145s Preparing to unpack .../257-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 145s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 145s Selecting previously unselected package r-cran-farver. 145s Preparing to unpack .../258-r-cran-farver_2.1.1-1_s390x.deb ... 145s Unpacking r-cran-farver (2.1.1-1) ... 145s Selecting previously unselected package r-cran-labeling. 145s Preparing to unpack .../259-r-cran-labeling_0.4.3-1_all.deb ... 145s Unpacking r-cran-labeling (0.4.3-1) ... 145s Selecting previously unselected package r-cran-colorspace. 145s Preparing to unpack .../260-r-cran-colorspace_2.1-0+dfsg-1_s390x.deb ... 145s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 145s Selecting previously unselected package r-cran-munsell. 145s Preparing to unpack .../261-r-cran-munsell_0.5.0-2build1_all.deb ... 145s Unpacking r-cran-munsell (0.5.0-2build1) ... 145s Selecting previously unselected package r-cran-rcolorbrewer. 145s Preparing to unpack .../262-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 145s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 145s Selecting previously unselected package r-cran-viridislite. 145s Preparing to unpack .../263-r-cran-viridislite_0.4.2-2_all.deb ... 145s Unpacking r-cran-viridislite (0.4.2-2) ... 145s Selecting previously unselected package r-cran-scales. 145s Preparing to unpack .../264-r-cran-scales_1.3.0-1_all.deb ... 145s Unpacking r-cran-scales (1.3.0-1) ... 146s Selecting previously unselected package r-cran-gtable. 146s Preparing to unpack .../265-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 146s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 146s Selecting previously unselected package r-cran-isoband. 146s Preparing to unpack .../266-r-cran-isoband_0.2.7-1_s390x.deb ... 146s Unpacking r-cran-isoband (0.2.7-1) ... 146s Selecting previously unselected package r-cran-mass. 146s Preparing to unpack .../267-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 146s Unpacking r-cran-mass (7.3-60.0.1-1) ... 146s Selecting previously unselected package r-cran-lattice. 146s Preparing to unpack .../268-r-cran-lattice_0.22-5-1_s390x.deb ... 146s Unpacking r-cran-lattice (0.22-5-1) ... 146s Selecting previously unselected package r-cran-nlme. 146s Preparing to unpack .../269-r-cran-nlme_3.1.164-1_s390x.deb ... 146s Unpacking r-cran-nlme (3.1.164-1) ... 146s Selecting previously unselected package r-cran-matrix. 146s Preparing to unpack .../270-r-cran-matrix_1.6-5-1_s390x.deb ... 146s Unpacking r-cran-matrix (1.6-5-1) ... 146s Selecting previously unselected package r-cran-mgcv. 146s Preparing to unpack .../271-r-cran-mgcv_1.9-1-1_s390x.deb ... 146s Unpacking r-cran-mgcv (1.9-1-1) ... 146s Selecting previously unselected package r-cran-ggplot2. 146s Preparing to unpack .../272-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 146s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 146s Selecting previously unselected package r-cran-cluster. 146s Preparing to unpack .../273-r-cran-cluster_2.1.6-1_s390x.deb ... 146s Unpacking r-cran-cluster (2.1.6-1) ... 146s Selecting previously unselected package r-cran-survival. 146s Preparing to unpack .../274-r-cran-survival_3.5-8-1_s390x.deb ... 146s Unpacking r-cran-survival (3.5-8-1) ... 146s Selecting previously unselected package r-cran-rpart. 146s Preparing to unpack .../275-r-cran-rpart_4.1.23-1_s390x.deb ... 146s Unpacking r-cran-rpart (4.1.23-1) ... 146s Selecting previously unselected package r-cran-nnet. 146s Preparing to unpack .../276-r-cran-nnet_7.3-19-2_s390x.deb ... 146s Unpacking r-cran-nnet (7.3-19-2) ... 146s Selecting previously unselected package r-cran-foreign. 146s Preparing to unpack .../277-r-cran-foreign_0.8.86-1_s390x.deb ... 146s Unpacking r-cran-foreign (0.8.86-1) ... 146s Selecting previously unselected package r-cran-gridextra. 146s Preparing to unpack .../278-r-cran-gridextra_2.3-3build1_all.deb ... 146s Unpacking r-cran-gridextra (2.3-3build1) ... 146s Selecting previously unselected package r-cran-data.table. 146s Preparing to unpack .../279-r-cran-data.table_1.14.10+dfsg-1_s390x.deb ... 146s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 146s Selecting previously unselected package r-cran-backports. 146s Preparing to unpack .../280-r-cran-backports_1.4.1-1_s390x.deb ... 146s Unpacking r-cran-backports (1.4.1-1) ... 146s Selecting previously unselected package r-cran-checkmate. 146s Preparing to unpack .../281-r-cran-checkmate_2.3.1-1_s390x.deb ... 146s Unpacking r-cran-checkmate (2.3.1-1) ... 146s Selecting previously unselected package r-cran-htmlwidgets. 146s Preparing to unpack .../282-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 146s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 146s Selecting previously unselected package r-cran-rstudioapi. 146s Preparing to unpack .../283-r-cran-rstudioapi_0.15.0-1_all.deb ... 146s Unpacking r-cran-rstudioapi (0.15.0-1) ... 146s Selecting previously unselected package r-cran-htmltable. 146s Preparing to unpack .../284-r-cran-htmltable_2.4.2-1_all.deb ... 146s Unpacking r-cran-htmltable (2.4.2-1) ... 146s Selecting previously unselected package r-cran-viridis. 146s Preparing to unpack .../285-r-cran-viridis_0.6.5-1_all.deb ... 146s Unpacking r-cran-viridis (0.6.5-1) ... 146s Selecting previously unselected package r-cran-formula. 146s Preparing to unpack .../286-r-cran-formula_1.2-5-1_all.deb ... 146s Unpacking r-cran-formula (1.2-5-1) ... 146s Selecting previously unselected package r-cran-chron. 146s Preparing to unpack .../287-r-cran-chron_2.3-61-2_s390x.deb ... 146s Unpacking r-cran-chron (2.3-61-2) ... 147s Selecting previously unselected package r-cran-jpeg. 147s Preparing to unpack .../288-r-cran-jpeg_0.1-10-1_s390x.deb ... 147s Unpacking r-cran-jpeg (0.1-10-1) ... 147s Selecting previously unselected package r-cran-deldir. 147s Preparing to unpack .../289-r-cran-deldir_2.0-4-1_s390x.deb ... 147s Unpacking r-cran-deldir (2.0-4-1) ... 147s Selecting previously unselected package r-cran-rcppeigen. 147s Preparing to unpack .../290-r-cran-rcppeigen_0.3.3.9.4-1_s390x.deb ... 147s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 147s Selecting previously unselected package r-cran-interp. 147s Preparing to unpack .../291-r-cran-interp_1.1-6-1_s390x.deb ... 147s Unpacking r-cran-interp (1.1-6-1) ... 147s Selecting previously unselected package r-cran-latticeextra. 147s Preparing to unpack .../292-r-cran-latticeextra_0.6-30-1_all.deb ... 147s Unpacking r-cran-latticeextra (0.6-30-1) ... 147s Selecting previously unselected package r-cran-acepack. 147s Preparing to unpack .../293-r-cran-acepack_1.4.2-1_s390x.deb ... 147s Unpacking r-cran-acepack (1.4.2-1) ... 147s Selecting previously unselected package r-cran-hmisc. 147s Preparing to unpack .../294-r-cran-hmisc_5.1-1-1_s390x.deb ... 147s Unpacking r-cran-hmisc (5.1-1-1) ... 147s Selecting previously unselected package r-cran-dichromat. 147s Preparing to unpack .../295-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ... 147s Unpacking r-cran-dichromat (1:2.0-0.1-1) ... 147s Selecting previously unselected package r-cran-matrixstats. 147s Preparing to unpack .../296-r-cran-matrixstats_1.2.0-1_s390x.deb ... 147s Unpacking r-cran-matrixstats (1.2.0-1) ... 147s Selecting previously unselected package r-bioc-matrixgenerics. 147s Preparing to unpack .../297-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 147s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 147s Selecting previously unselected package r-cran-abind. 147s Preparing to unpack .../298-r-cran-abind_1.4-5-2_all.deb ... 147s Unpacking r-cran-abind (1.4-5-2) ... 147s Selecting previously unselected package r-bioc-s4arrays. 147s Preparing to unpack .../299-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-sparsearray. 147s Preparing to unpack .../300-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 147s Selecting previously unselected package r-bioc-delayedarray. 147s Preparing to unpack .../301-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-summarizedexperiment. 147s Preparing to unpack .../302-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 147s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-rhtslib. 147s Preparing to unpack .../303-r-bioc-rhtslib_2.4.1+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 147s Selecting previously unselected package r-bioc-rsamtools. 147s Preparing to unpack .../304-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 147s Selecting previously unselected package r-bioc-genomicalignments. 147s Preparing to unpack .../305-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 147s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 147s Selecting previously unselected package r-cran-rjson. 147s Preparing to unpack .../306-r-cran-rjson_0.2.21-1_s390x.deb ... 147s Unpacking r-cran-rjson (0.2.21-1) ... 147s Selecting previously unselected package r-cran-restfulr. 147s Preparing to unpack .../307-r-cran-restfulr_0.0.15-1_s390x.deb ... 147s Unpacking r-cran-restfulr (0.0.15-1) ... 147s Selecting previously unselected package r-bioc-rtracklayer. 147s Preparing to unpack .../308-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 147s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 147s Selecting previously unselected package r-bioc-genomicfeatures. 147s Preparing to unpack .../309-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 147s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 147s Selecting previously unselected package r-bioc-bsgenome. 147s Preparing to unpack .../310-r-bioc-bsgenome_1.70.2-1_all.deb ... 147s Unpacking r-bioc-bsgenome (1.70.2-1) ... 148s Selecting previously unselected package r-bioc-variantannotation. 148s Preparing to unpack .../311-r-bioc-variantannotation_1.48.1-1build1_s390x.deb ... 148s Unpacking r-bioc-variantannotation (1.48.1-1build1) ... 148s Selecting previously unselected package r-bioc-protgenerics. 148s Preparing to unpack .../312-r-bioc-protgenerics_1.34.0-1_all.deb ... 148s Unpacking r-bioc-protgenerics (1.34.0-1) ... 148s Selecting previously unselected package r-bioc-ensembldb. 148s Preparing to unpack .../313-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-biovizbase. 148s Preparing to unpack .../314-r-bioc-biovizbase_1.50.0-1_s390x.deb ... 148s Unpacking r-bioc-biovizbase (1.50.0-1) ... 148s Selecting previously unselected package r-cran-plyr. 148s Preparing to unpack .../315-r-cran-plyr_1.8.9-1_s390x.deb ... 148s Unpacking r-cran-plyr (1.8.9-1) ... 148s Selecting previously unselected package r-cran-reshape2. 148s Preparing to unpack .../316-r-cran-reshape2_1.4.4-2build1_s390x.deb ... 148s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 148s Selecting previously unselected package r-bioc-graph. 148s Preparing to unpack .../317-r-bioc-graph_1.80.0-1_s390x.deb ... 148s Unpacking r-bioc-graph (1.80.0-1) ... 148s Selecting previously unselected package r-bioc-rbgl. 148s Preparing to unpack .../318-r-bioc-rbgl_1.78.0+dfsg-1_s390x.deb ... 148s Unpacking r-bioc-rbgl (1.78.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-organismdbi. 148s Preparing to unpack .../319-r-bioc-organismdbi_1.44.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-organismdbi (1.44.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-broom. 148s Preparing to unpack .../320-r-cran-broom_1.0.5+dfsg-1_all.deb ... 148s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 148s Selecting previously unselected package r-cran-forcats. 148s Preparing to unpack .../321-r-cran-forcats_1.0.0-1_all.deb ... 148s Unpacking r-cran-forcats (1.0.0-1) ... 148s Selecting previously unselected package r-cran-clipr. 148s Preparing to unpack .../322-r-cran-clipr_0.8.0-1_all.deb ... 148s Unpacking r-cran-clipr (0.8.0-1) ... 148s Selecting previously unselected package r-cran-tzdb. 148s Preparing to unpack .../323-r-cran-tzdb_0.4.0-2_s390x.deb ... 148s Unpacking r-cran-tzdb (0.4.0-2) ... 148s Selecting previously unselected package r-cran-vroom. 148s Preparing to unpack .../324-r-cran-vroom_1.6.5-1_s390x.deb ... 148s Unpacking r-cran-vroom (1.6.5-1) ... 148s Selecting previously unselected package r-cran-readr. 148s Preparing to unpack .../325-r-cran-readr_2.1.5-1_s390x.deb ... 148s Unpacking r-cran-readr (2.1.5-1) ... 148s Selecting previously unselected package r-cran-haven. 148s Preparing to unpack .../326-r-cran-haven_2.5.4-1_s390x.deb ... 148s Unpacking r-cran-haven (2.5.4-1) ... 148s Selecting previously unselected package r-cran-labelled. 148s Preparing to unpack .../327-r-cran-labelled_2.12.0-2_all.deb ... 148s Unpacking r-cran-labelled (2.12.0-2) ... 148s Selecting previously unselected package r-cran-broom.helpers. 148s Preparing to unpack .../328-r-cran-broom.helpers_1.14.0-2_all.deb ... 148s Unpacking r-cran-broom.helpers (1.14.0-2) ... 148s Selecting previously unselected package r-cran-patchwork. 148s Preparing to unpack .../329-r-cran-patchwork_1.2.0-1_all.deb ... 148s Unpacking r-cran-patchwork (1.2.0-1) ... 148s Selecting previously unselected package r-cran-ggstats. 148s Preparing to unpack .../330-r-cran-ggstats_0.5.1-2_all.deb ... 148s Unpacking r-cran-ggstats (0.5.1-2) ... 148s Selecting previously unselected package r-cran-ggally. 148s Preparing to unpack .../331-r-cran-ggally_2.2.1-1_all.deb ... 148s Unpacking r-cran-ggally (2.2.1-1) ... 148s Selecting previously unselected package r-bioc-ggbio. 148s Preparing to unpack .../332-r-bioc-ggbio_1.50.0-1_all.deb ... 148s Unpacking r-bioc-ggbio (1.50.0-1) ... 148s Selecting previously unselected package r-cran-brio. 148s Preparing to unpack .../333-r-cran-brio_1.1.4-1_s390x.deb ... 148s Unpacking r-cran-brio (1.1.4-1) ... 149s Selecting previously unselected package r-cran-ps. 149s Preparing to unpack .../334-r-cran-ps_1.7.6-1_s390x.deb ... 149s Unpacking r-cran-ps (1.7.6-1) ... 149s Selecting previously unselected package r-cran-processx. 149s Preparing to unpack .../335-r-cran-processx_3.8.3-1_s390x.deb ... 149s Unpacking r-cran-processx (3.8.3-1) ... 149s Selecting previously unselected package r-cran-callr. 149s Preparing to unpack .../336-r-cran-callr_3.7.3-2_all.deb ... 149s Unpacking r-cran-callr (3.7.3-2) ... 149s Selecting previously unselected package r-cran-desc. 149s Preparing to unpack .../337-r-cran-desc_1.4.3-1_all.deb ... 149s Unpacking r-cran-desc (1.4.3-1) ... 149s Selecting previously unselected package r-cran-diffobj. 149s Preparing to unpack .../338-r-cran-diffobj_0.3.5-1_s390x.deb ... 149s Unpacking r-cran-diffobj (0.3.5-1) ... 149s Selecting previously unselected package r-cran-pkgbuild. 149s Preparing to unpack .../339-r-cran-pkgbuild_1.4.3-1_all.deb ... 149s Unpacking r-cran-pkgbuild (1.4.3-1) ... 149s Selecting previously unselected package r-cran-rprojroot. 149s Preparing to unpack .../340-r-cran-rprojroot_2.0.4-1_all.deb ... 149s Unpacking r-cran-rprojroot (2.0.4-1) ... 149s Selecting previously unselected package r-cran-pkgload. 149s Preparing to unpack .../341-r-cran-pkgload_1.3.4-1_all.deb ... 149s Unpacking r-cran-pkgload (1.3.4-1) ... 149s Selecting previously unselected package r-cran-praise. 149s Preparing to unpack .../342-r-cran-praise_1.0.0-4build1_all.deb ... 149s Unpacking r-cran-praise (1.0.0-4build1) ... 149s Selecting previously unselected package r-cran-rematch2. 149s Preparing to 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Setting up r-cran-viridislite (0.4.2-2) ... 152s Setting up texlive-binaries (2023.20230311.66589-9) ... 152s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 152s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 152s Setting up r-cran-cluster (2.1.6-1) ... 152s Setting up build-essential (12.10ubuntu1) ... 152s Setting up r-cran-nnet (7.3-19-2) ... 152s Setting up r-cran-lazyeval (0.2.2-1build1) ... 152s Setting up r-cran-clipr (0.8.0-1) ... 152s Setting up r-cran-commonmark (1.9.1-1) ... 152s Setting up r-cran-r6 (2.5.1-1) ... 152s Setting up r-cran-pkgkitten (0.2.3-1) ... 152s Setting up r-cran-jpeg (0.1-10-1) ... 152s Setting up r-cran-chron (2.3-61-2) ... 152s Setting up texlive-base (2023.20240207-1) ... 153s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 153s tl-paper: setting paper size for dvipdfmx to a4: 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r-bioc-matrixgenerics (1.14.0-1) ... 154s Setting up r-cran-xfun (0.41+dfsg-1) ... 154s Setting up r-cran-sys (3.4.2-1) ... 154s Setting up r-cran-plogr (0.2.0-3build1) ... 154s Setting up r-cran-withr (2.5.0-1) ... 154s Setting up r-cran-backports (1.4.1-1) ... 154s Setting up r-cran-processx (3.8.3-1) ... 154s Setting up r-cran-mime (0.12-1) ... 154s Setting up r-cran-praise (1.0.0-4build1) ... 154s Setting up r-cran-generics (0.1.3-1) ... 154s Setting up r-cran-base64enc (0.1-3-3) ... 154s Setting up r-cran-abind (1.4-5-2) ... 154s Setting up r-cran-digest (0.6.34-1) ... 154s Setting up r-cran-yaml (2.3.8-1) ... 154s Setting up r-cran-lambda.r (1.2.4-2build1) ... 154s Setting up r-bioc-protgenerics (1.34.0-1) ... 154s Setting up r-cran-evaluate (0.23-1) ... 154s Setting up r-cran-dbi (1.2.2-1) ... 154s Setting up r-cran-highr (0.10+dfsg-1) ... 154s Setting up r-cran-prettyunits (1.2.0-1) ... 154s Setting up r-cran-fansi (1.0.5-1) ... 154s Setting up r-cran-mass (7.3-60.0.1-1) ... 154s Setting up r-cran-checkmate (2.3.1-1) ... 154s Setting up r-cran-acepack (1.4.2-1) ... 154s Setting up r-cran-snow (1:0.4.4-2) ... 154s Setting up r-cran-data.table (1.14.10+dfsg-1) ... 154s Setting up r-cran-glue (1.7.0-1) ... 154s Setting up r-cran-foreign (0.8.86-1) ... 154s Setting up r-cran-bit (4.0.5-1) ... 154s Setting up r-cran-xtable (1:1.8-4-2) ... 154s Setting up r-cran-cli (3.6.2-1) ... 154s Setting up gfortran (4:13.2.0-7ubuntu1) ... 154s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 154s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 154s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 154s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 154s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 154s Setting up r-cran-bitops (1.0-7-1) ... 154s Setting up r-cran-rprojroot (2.0.4-1) ... 154s Setting up r-cran-bit64 (4.0.5-1) ... 154s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 154s Setting up r-cran-dichromat (1:2.0-0.1-1) ... 154s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 154s Setting up r-cran-deldir (2.0-4-1) ... 154s Setting up r-cran-askpass (1.2.0-1) ... 154s Setting up r-cran-fastmap (1.1.1-1) ... 154s Setting up r-cran-png (0.1-8-1) ... 154s Setting up r-bioc-biobase (2.62.0-1) ... 154s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 154s Setting up r-cran-rstudioapi (0.15.0-1) ... 154s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 154s Setting up r-cran-utf8 (1.2.4-1) ... 154s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 154s Setting up r-cran-stringi (1.8.3-1) ... 154s Setting up texlive-latex-base (2023.20240207-1) ... 154s Setting up r-cran-cpp11 (0.4.7-1) ... 154s Setting up r-cran-plyr (1.8.9-1) ... 154s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 154s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 154s Setting up r-cran-isoband (0.2.7-1) ... 154s Setting up r-cran-futile.logger (1.4.3-4build1) ... 154s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 154s Setting up r-cran-later (1.3.2+dfsg-1) ... 154s Setting up r-cran-matrix (1.6-5-1) ... 154s Setting up r-cran-tinytex (0.49-1) ... 154s Setting up r-cran-knitr (1.45+dfsg-1) ... 154s Setting up r-cran-mgcv (1.9-1-1) ... 154s Setting up r-cran-cachem (1.0.8-1) ... 154s Setting up r-bioc-iranges (2.36.0-1) ... 154s Setting up r-cran-rjson (0.2.21-1) ... 154s Setting up r-cran-tzdb (0.4.0-2) ... 154s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 154s Setting up r-cran-restfulr (0.0.15-1) ... 154s Setting up r-cran-vctrs (0.6.5-1) ... 154s Setting up r-cran-rcppeigen (0.3.3.9.4-1) ... 154s Setting up r-bioc-graph (1.80.0-1) ... 154s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 154s Setting up r-cran-ellipsis (0.3.2-2) ... 154s Setting up r-bioc-rbgl (1.78.0+dfsg-1) ... 154s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 154s Setting up r-base-dev (4.3.2-1build1) ... 154s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 154s Setting up r-cran-stringr (1.5.1-1) ... 154s Setting up r-bioc-biocparallel (1.36.0-1) ... 154s Setting up r-cran-callr (3.7.3-2) ... 154s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 154s Setting up r-cran-desc (1.4.3-1) ... 154s Setting up r-cran-xml2 (1.3.6-1) ... 154s Setting up r-cran-munsell (0.5.0-2build1) ... 154s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 154s Setting up r-cran-survival (3.5-8-1) ... 154s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 154s Setting up r-cran-forcats (1.0.0-1) ... 154s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 154s Setting up texlive-bibtex-extra (2023.20240207-1) ... 154s Setting up r-cran-reshape2 (1.4.4-2build1) ... 154s Setting up r-cran-interp (1.1-6-1) ... 154s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 154s Setting up r-cran-httr (1.4.7+dfsg-1) ... 154s Setting up r-cran-gridextra (2.3-3build1) ... 154s Setting up r-cran-hms (1.1.3-1) ... 154s Setting up r-cran-scales (1.3.0-1) ... 154s Setting up r-cran-memoise (2.0.1-1) ... 154s Setting up r-cran-promises (1.2.1+dfsg-1) ... 154s Setting up r-cran-purrr (1.0.2-1) ... 154s Setting up r-cran-blob (1.2.4-1) ... 154s Setting up r-cran-htmltools (0.5.7-1) ... 154s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 154s Setting up r-bioc-xvector (0.42.0-1) ... 154s Setting up r-cran-pkgbuild (1.4.3-1) ... 154s Setting up r-cran-sass (0.4.8+dfsg-1) ... 154s Setting up r-cran-dplyr (1.1.4-1) ... 154s Setting up r-cran-rsqlite (2.3.4-1) ... 154s Setting up r-cran-progress (1.2.3-1) ... 154s Setting up r-cran-pkgload (1.3.4-1) ... 154s Setting up r-cran-vroom (1.6.5-1) ... 154s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 154s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 154s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 154s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 154s Setting up r-cran-rematch2 (2.1.2-2build1) ... 154s Setting up r-cran-rpart (4.1.23-1) ... 154s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 154s Setting up r-bioc-annotationfilter (1.26.0+dfsg-1) ... 154s Setting up r-cran-fontawesome (0.5.2-1) ... 154s Setting up r-cran-latticeextra (0.6-30-1) ... 154s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 154s Setting up r-cran-viridis (0.6.5-1) ... 154s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 154s Setting up r-cran-readr (2.1.5-1) ... 154s Setting up r-cran-waldo (0.5.2-1build1) ... 154s Setting up r-cran-tidyr (1.3.1-1) ... 154s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 154s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 154s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 154s Setting up r-cran-patchwork (1.2.0-1) ... 154s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 154s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 154s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 154s Setting up r-cran-haven (2.5.4-1) ... 154s Setting up r-bioc-annotationdbi (1.64.1-1) ... 154s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 154s Setting up r-cran-testthat (3.2.1-1) ... 154s Setting up r-cran-broom (1.0.5+dfsg-1) ... 154s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 154s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 154s Setting up r-cran-labelled (2.12.0-2) ... 154s Setting up r-bioc-genomicalignments (1.38.2-1) ... 154s Setting up r-cran-bookdown (0.37+dfsg-1) ... 154s Setting up r-bioc-rtracklayer (1.62.0-1) ... 154s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 154s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 154s Setting up r-cran-broom.helpers (1.14.0-2) ... 154s Setting up r-bioc-bsgenome (1.70.2-1) ... 154s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 154s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 154s Setting up r-bioc-organismdbi (1.44.0+dfsg-1) ... 154s Setting up r-cran-ggstats (0.5.1-2) ... 154s Setting up r-bioc-variantannotation (1.48.1-1build1) ... 154s Setting up r-cran-ggally (2.2.1-1) ... 154s Setting up r-cran-htmltable (2.4.2-1) ... 154s Setting up r-cran-hmisc (5.1-1-1) ... 154s Setting up r-bioc-biovizbase (1.50.0-1) ... 154s Setting up r-bioc-ggbio (1.50.0-1) ... 154s Setting up autopkgtest-satdep (0) ... 154s Processing triggers for man-db (2.12.0-3) ... 155s Processing triggers for install-info (7.1-3) ... 155s Processing triggers for libc-bin (2.39-0ubuntu2) ... 155s Processing triggers for tex-common (6.18) ... 155s Running updmap-sys. This may take some time... done. 155s Running mktexlsr /var/lib/texmf ... done. 155s Building format(s) --all. 201s This may take some time... done. 210s (Reading database ... 108090 files and directories currently installed.) 210s Removing autopkgtest-satdep (0) ... 210s autopkgtest [19:01:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 210s autopkgtest [19:01:55]: test pkg-r-autopkgtest: [----------------------- 210s Test: Try to load the R library ggbio 211s 211s R version 4.3.2 (2023-10-31) -- "Eye Holes" 211s Copyright (C) 2023 The R Foundation for Statistical Computing 211s Platform: s390x-ibm-linux-gnu (64-bit) 211s 211s R is free software and comes with ABSOLUTELY NO WARRANTY. 211s You are welcome to redistribute it under certain conditions. 211s Type 'license()' or 'licence()' for distribution details. 211s 211s R is a collaborative project with many contributors. 211s Type 'contributors()' for more information and 211s 'citation()' on how to cite R or R packages in publications. 211s 211s Type 'demo()' for some demos, 'help()' for on-line help, or 211s 'help.start()' for an HTML browser interface to help. 211s Type 'q()' to quit R. 211s 211s > library('ggbio') 211s Loading required package: BiocGenerics 211s 211s Attaching package: ‘BiocGenerics’ 211s 211s The following objects are masked from ‘package:stats’: 211s 211s IQR, mad, sd, var, xtabs 211s 211s The following objects are masked from ‘package:base’: 211s 211s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 211s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 211s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 211s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 211s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 211s table, tapply, union, unique, unsplit, which.max, which.min 211s 211s Loading required package: ggplot2 211s Registered S3 method overwritten by 'GGally': 211s method from 211s +.gg ggplot2 226s Need specific help about ggbio? try mailing 226s the maintainer or visit https://lawremi.github.io/ggbio/ 226s 226s Attaching package: 'ggbio' 226s 226s The following objects are masked from 'package:ggplot2': 226s 226s geom_bar, geom_rect, geom_segment, ggsave, stat_bin, stat_identity, 226s xlim 226s 226s > 226s > 226s Other tests are currently unsupported! 226s They will be progressively added. 226s autopkgtest [19:02:11]: test pkg-r-autopkgtest: -----------------------] 227s pkg-r-autopkgtest PASS 227s autopkgtest [19:02:12]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 227s autopkgtest [19:02:12]: @@@@@@@@@@@@@@@@@@@@ summary 227s pkg-r-autopkgtest PASS 238s Creating nova instance adt-noble-s390x-r-bioc-ggbio-20240316-185825-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...