0s autopkgtest [18:32:17]: starting date and time: 2024-03-16 18:32:17+0000 0s autopkgtest [18:32:17]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [18:32:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zrokti06/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-ggbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-2.secgroup --name adt-noble-s390x-r-bioc-ggbio-20240316-183216-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 215s autopkgtest [18:35:52]: testbed dpkg architecture: s390x 215s autopkgtest [18:35:52]: testbed apt version: 2.7.12 215s autopkgtest [18:35:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup 216s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 216s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 216s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 216s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 216s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 216s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 216s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 216s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 216s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 216s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 217s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 217s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 217s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 219s Fetched 8760 kB in 2s (3972 kB/s) 219s Reading package lists... 221s Reading package lists... 221s Building dependency tree... 221s Reading state information... 221s Calculating upgrade... 221s The following packages will be REMOVED: 221s libssl3 221s The following NEW packages will be installed: 221s libssl3t64 221s The following packages have been kept back: 221s curl 221s The following packages will be upgraded: 221s openssl ubuntu-minimal ubuntu-standard 222s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 222s Need to get 2680 kB of archives. 222s After this operation, 23.6 kB of additional disk space will be used. 222s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 222s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 222s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 222s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 222s Fetched 2680 kB in 1s (3661 kB/s) 222s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 222s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 222s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 223s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 223s wget depends on libssl3 (>= 3.0.0). 223s tnftp depends on libssl3 (>= 3.0.0). 223s tcpdump depends on libssl3 (>= 3.0.0). 223s systemd-resolved depends on libssl3 (>= 3.0.0). 223s systemd depends on libssl3 (>= 3.0.0). 223s sudo depends on libssl3 (>= 3.0.0). 223s s390-tools depends on libssl3 (>= 3.0.0). 223s rsync depends on libssl3 (>= 3.0.0). 223s python3-cryptography depends on libssl3 (>= 3.0.0). 223s openssh-server depends on libssl3 (>= 3.0.10). 223s openssh-client depends on libssl3 (>= 3.0.10). 223s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 223s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 223s libssh-4:s390x depends on libssl3 (>= 3.0.0). 223s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 223s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 223s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 223s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 223s libnvme1 depends on libssl3 (>= 3.0.0). 223s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 223s libkmod2:s390x depends on libssl3 (>= 3.0.0). 223s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 223s libcurl4:s390x depends on libssl3 (>= 3.0.0). 223s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 223s kmod depends on libssl3 (>= 3.0.0). 223s dhcpcd-base depends on libssl3 (>= 3.0.0). 223s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 223s 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 223s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 223s Selecting previously unselected package libssl3t64:s390x. 223s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 223s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 223s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 223s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 223s Unpacking ubuntu-minimal (1.536) over (1.535) ... 223s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 223s Unpacking ubuntu-standard (1.536) over (1.535) ... 223s Setting up ubuntu-minimal (1.536) ... 223s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 223s Setting up ubuntu-standard (1.536) ... 223s Setting up openssl (3.0.13-0ubuntu1) ... 223s Processing triggers for man-db (2.12.0-3) ... 223s Processing triggers for libc-bin (2.39-0ubuntu2) ... 223s Reading package lists... 224s Building dependency tree... 224s Reading state information... 224s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 224s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 224s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 224s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 224s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 225s Reading package lists... 225s Reading package lists... 226s Building dependency tree... 226s Reading state information... 226s Calculating upgrade... 226s The following packages have been kept back: 226s curl 226s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 226s Reading package lists... 226s Building dependency tree... 226s Reading state information... 226s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 229s autopkgtest [18:36:06]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 229s autopkgtest [18:36:06]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-ggbio 231s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (dsc) [2564 B] 231s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (tar) [3252 kB] 231s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-ggbio 1.50.0-1 (diff) [5428 B] 231s gpgv: Signature made Fri Dec 8 14:52:19 2023 UTC 231s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 231s gpgv: issuer "tille@debian.org" 231s gpgv: Can't check signature: No public key 231s dpkg-source: warning: cannot verify inline signature for ./r-bioc-ggbio_1.50.0-1.dsc: no acceptable signature found 231s autopkgtest [18:36:08]: testing package r-bioc-ggbio version 1.50.0-1 231s autopkgtest [18:36:08]: build not needed 232s autopkgtest [18:36:09]: test pkg-r-autopkgtest: preparing testbed 234s Reading package lists... 234s Building dependency tree... 234s Reading state information... 234s Starting pkgProblemResolver with broken count: 0 234s Starting 2 pkgProblemResolver with broken count: 0 234s Done 234s The following additional packages will be installed: 234s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 234s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 234s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 234s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 234s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 234s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 234s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 234s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 234s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 234s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 234s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 234s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 234s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 234s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 234s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 234s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 234s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 234s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 234s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 234s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 234s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 234s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 234s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 234s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 234s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 234s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev littler 234s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 234s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 234s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 234s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 234s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-biovizbase 234s r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 234s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 234s r-bioc-genomicranges r-bioc-ggbio r-bioc-graph r-bioc-iranges 234s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi r-bioc-protgenerics 234s r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 234s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 234s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 234s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 234s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 234s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 234s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 234s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 234s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 234s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 234s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 234s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 234s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 234s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 234s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 234s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 234s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 234s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 234s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 234s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 234s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 234s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 234s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 234s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 234s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 234s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 234s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 234s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 234s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 234s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 234s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 234s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 234s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 234s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 234s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 234s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 234s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 234s xdg-utils zip zlib1g-dev 234s Suggested packages: 234s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 234s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 234s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 234s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 234s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 234s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 234s libboost-context1.83-dev libboost-contract1.83-dev 234s libboost-coroutine1.83-dev libboost-date-time1.83-dev 234s libboost-exception1.83-dev libboost-fiber1.83-dev 234s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 234s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 234s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 234s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 234s libboost-numpy1.83-dev libboost-program-options1.83-dev 234s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 234s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 234s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 234s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 234s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 234s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 234s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 234s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 234s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 234s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 234s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 234s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 234s r-bioc-go.db r-cran-runit r-bioc-org.hs.eg.db r-bioc-all r-bioc-affy 234s r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 234s r-bioc-shortread r-cran-batchtools r-cran-mockery r-cran-webmockr 234s r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats 234s r-bioc-gviz r-bioc-annotationhub r-cran-r.utils r-bioc-edger r-cran-markdown 234s r-bioc-dexseq r-cran-sparsem r-bioc-sparsematrixstats r-bioc-limma 234s r-bioc-rhdf5 r-bioc-snpstats r-cran-roxygen2 r-cran-ff r-cran-covr 234s r-cran-aer r-cran-bbmle r-cran-boot r-cran-car r-cran-cardata r-cran-caret 234s r-cran-cmprsk r-cran-coda r-cran-e1071 r-cran-emmeans r-cran-epir r-cran-gam 234s r-cran-gee r-cran-geepack r-cran-glmnet r-cran-gmm r-cran-irlba r-cran-ks 234s r-cran-lavaan r-cran-leaps r-cran-lme4 r-cran-lmtest r-cran-lsmeans 234s r-cran-maps r-cran-mclust r-cran-metafor r-cran-modeldata r-cran-multcomp 234s r-cran-network r-cran-ordinal r-cran-plm r-cran-psych r-cran-quantreg 234s r-cran-robust r-cran-robustbase r-cran-rsample r-cran-sandwich r-cran-sp 234s r-cran-spdep r-cran-spatialreg r-cran-spelling r-cran-survey 234s r-cran-systemfit r-cran-tseries r-cran-zoo r-cran-kernsmooth r-cran-kernlab 234s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-rmysql r-cran-polyclip 234s r-cran-lubridate r-cran-scatterplot3d r-cran-magick r-cran-sf r-cran-getopt 234s r-cran-formattable r-cran-nanotime r-cran-palmerpenguins r-cran-units 234s r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer r-cran-bench 234s r-cran-here debhelper ghostscript gv | postscript-viewer perl-tk xpdf 234s | pdf-viewer xzdec hintview texlive-latex-base-doc wp2latex 234s Recommended packages: 234s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 234s r-recommended r-doc-html r-bioc-biocversion r-cran-remotes r-cran-downlit 234s r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot 234s r-cran-covr r-cran-brms r-cran-broom.mixed r-cran-cmprsk r-cran-effects 234s r-cran-emmeans r-cran-gam r-cran-gee r-cran-geepack r-cran-ggeffects 234s r-cran-glmmtmb r-cran-lavaan r-cran-lme4 r-cran-mice r-cran-ordinal 234s r-cran-parameters r-cran-plm r-cran-pscl r-cran-rstanarm r-cran-spelling 234s r-cran-survey r-cran-vgam r-cran-thematic r-cran-cliapp r-cran-mockery 234s r-cran-fastmatch r-cran-devtools r-cran-tinytest r-cran-whoami r-cran-bench 234s r-cran-decor r-cran-lobstr r-cran-webutils r-cran-r.utils r-cran-xts 234s r-cran-nanotime r-cran-zoo r-cran-rpostgresql r-cran-gh r-cran-rmysql 234s r-cran-unitizer r-cran-rsvg r-cran-geosphere r-cran-ggforce r-cran-igraph 234s r-cran-intergraph r-cran-maps r-cran-mapproj r-cran-network r-cran-sna 234s r-cran-roxygen2 r-cran-crosstalk r-cran-vdiffr r-cran-hexbin r-cran-multcomp 234s r-cran-profvis r-cran-quantreg r-cran-ragg r-cran-sf r-cran-svglite 234s r-cran-reshape r-cran-cairo r-cran-markdown r-cran-r.rsp r-cran-gridsvg 234s r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 234s node-highlight.js r-cran-snakecase r-cran-lintr r-cran-tidyverse 234s r-cran-r.devices r-cran-sodium r-cran-gridgraphics r-cran-lubridate 234s r-cran-mathjaxr r-cran-mockr r-cran-doparallel r-cran-foreach 234s r-cran-iterators r-cran-itertools r-cran-webfakes r-cran-future r-cran-pingr 234s r-cran-runit r-cran-usethis r-cran-dygraphs r-cran-dbitest r-cran-gert 234s r-cran-rvest r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 234s lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 234s x11-utils x11-xserver-utils 234s The following packages will be REMOVED: 234s libcurl4 libpsl5 234s The following NEW packages will be installed: 234s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 234s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 234s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 234s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 234s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 234s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 234s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 234s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 234s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 234s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 234s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 234s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 234s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 234s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 234s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 234s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 234s libjs-popper.js libjs-prettify libjs-sifter.js 234s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 234s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 234s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 234s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 234s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 234s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 234s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 234s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 234s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 234s linux-libc-dev littler node-bootstrap-sass node-html5shiv node-normalize.css 234s pandoc pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin 234s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter 234s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio 234s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings 234s r-bioc-biovizbase r-bioc-bsgenome r-bioc-delayedarray r-bioc-ensembldb 234s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 234s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-ggbio r-bioc-graph 234s r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-organismdbi 234s r-bioc-protgenerics r-bioc-rbgl r-bioc-rhtslib r-bioc-rsamtools 234s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 234s r-bioc-summarizedexperiment r-bioc-variantannotation r-bioc-xvector 234s r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass r-cran-backports 234s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 234s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio r-cran-broom 234s r-cran-broom.helpers r-cran-bslib r-cran-cachem r-cran-callr 234s r-cran-checkmate r-cran-chron r-cran-cli r-cran-clipr r-cran-cluster 234s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 234s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 234s r-cran-deldir r-cran-desc r-cran-dichromat r-cran-diffobj r-cran-digest 234s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver 234s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-forcats 234s r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger 234s r-cran-futile.options r-cran-generics r-cran-ggally r-cran-ggplot2 234s r-cran-ggstats r-cran-glue r-cran-gridextra r-cran-gtable r-cran-haven 234s r-cran-highr r-cran-hmisc r-cran-hms r-cran-htmltable r-cran-htmltools 234s r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-interp r-cran-isoband 234s r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 234s r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice 234s r-cran-latticeextra r-cran-lazyeval r-cran-lifecycle r-cran-littler 234s r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-memoise 234s r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme r-cran-nnet 234s r-cran-openssl r-cran-patchwork r-cran-pillar r-cran-pkgbuild 234s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr 234s r-cran-png r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress 234s r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs 234s r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl r-cran-readr 234s r-cran-rematch2 r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang 234s r-cran-rmarkdown r-cran-rpart r-cran-rprojroot r-cran-rsqlite 234s r-cran-rstudioapi r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 234s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 234s r-cran-testthat r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex 234s r-cran-tzdb r-cran-utf8 r-cran-vctrs r-cran-viridis r-cran-viridislite 234s r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 234s r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common texlive-base 234s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 234s xdg-utils zip zlib1g-dev 234s The following packages will be upgraded: 234s curl 234s 1 upgraded, 348 newly installed, 2 to remove and 0 not upgraded. 234s Need to get 505 MB/505 MB of archives. 234s After this operation, 1516 MB of additional disk space will be used. 234s Get:1 /tmp/autopkgtest.ivNKNA/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [756 B] 235s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 235s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 235s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 235s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 235s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 235s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 235s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 235s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 235s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 235s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 235s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 235s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 235s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 235s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 235s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 235s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 235s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 235s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 235s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 235s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 235s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 236s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 236s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 236s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 236s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 236s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 236s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 236s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 236s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 236s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 236s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 236s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 236s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 236s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 236s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 236s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 236s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 236s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 236s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 236s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 236s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 236s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 236s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 237s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 237s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 237s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 237s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 237s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 237s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 237s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 237s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 237s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 237s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 237s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 237s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 237s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 237s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 237s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 237s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 237s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 237s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 237s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 237s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 237s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 237s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 237s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 237s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 237s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 237s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 237s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 237s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 237s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 238s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 238s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 238s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 238s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 238s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 238s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 238s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 238s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 238s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 238s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 238s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 238s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 238s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 238s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 238s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 238s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 238s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 238s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 238s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 238s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 238s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 238s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 238s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 238s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 238s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 238s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 238s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 238s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 238s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 238s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 238s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 238s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 238s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 238s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 238s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 238s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 239s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 239s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 239s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 239s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 239s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 239s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 239s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 239s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 239s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 239s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 239s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 239s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 239s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 239s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 239s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 239s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 239s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 239s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 239s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 239s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 239s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 239s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 239s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 239s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 239s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 239s Get:135 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 239s Get:136 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 239s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 240s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 240s Get:139 http://ftpmaster.internal/ubuntu noble/universe s390x littler all 0.3.19-1 [2472 B] 240s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 240s Get:141 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 240s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 240s Get:143 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 240s Get:144 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 242s Get:145 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 242s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 242s Get:147 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 242s Get:148 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 242s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 242s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 242s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 242s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 242s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 242s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 242s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 242s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 242s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 242s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 242s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 243s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 243s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 243s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 243s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 243s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 243s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 243s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 243s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 243s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 243s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 243s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 243s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 243s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 243s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 243s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 243s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 243s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 243s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 243s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 243s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 243s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 243s Get:181 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 243s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 243s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1 [794 kB] 243s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 243s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 244s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 244s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 244s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 244s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 244s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 244s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 244s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 244s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 244s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 245s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 245s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 245s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 245s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 245s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 245s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 245s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 245s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 245s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 245s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 245s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 245s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 245s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 245s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 245s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 245s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 245s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 245s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 245s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 245s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 245s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 245s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 245s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 245s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 245s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 245s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 245s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 245s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 246s Get:223 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 246s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 246s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 246s Get:226 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 246s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 246s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 246s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 246s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 246s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 246s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 246s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 246s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 246s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 246s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 246s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 246s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 246s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 246s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 246s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 246s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 246s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 246s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 246s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 247s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 247s Get:247 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 247s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 247s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 247s Get:250 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 247s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 247s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 248s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 248s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 251s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 251s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 251s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 251s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 251s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 251s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 251s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 251s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-farver s390x 2.1.1-1 [1347 kB] 252s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 252s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-colorspace s390x 2.1-0+dfsg-1 [1540 kB] 252s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-munsell all 0.5.0-2build1 [208 kB] 252s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 252s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 252s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 252s Get:269 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 252s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 252s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mass s390x 7.3-60.0.1-1 [1122 kB] 252s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 252s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nlme s390x 3.1.164-1 [2268 kB] 252s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 252s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 252s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 252s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cluster s390x 2.1.6-1 [562 kB] 252s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-survival s390x 3.5-8-1 [6161 kB] 253s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rpart s390x 4.1.23-1 [667 kB] 253s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-nnet s390x 7.3-19-2 [112 kB] 253s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-foreign s390x 0.8.86-1 [247 kB] 253s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB] 253s Get:283 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-data.table s390x 1.14.10+dfsg-1 [1880 kB] 253s Get:284 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-backports s390x 1.4.1-1 [101 kB] 253s Get:285 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-checkmate s390x 2.3.1-1 [716 kB] 253s Get:286 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 253s Get:287 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rstudioapi all 0.15.0-1 [277 kB] 253s Get:288 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltable all 2.4.2-1 [381 kB] 253s Get:289 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-viridis all 0.6.5-1 [2770 kB] 253s Get:290 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formula all 1.2-5-1 [158 kB] 253s Get:291 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-chron s390x 2.3-61-2 [186 kB] 253s Get:292 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jpeg s390x 0.1-10-1 [31.3 kB] 253s Get:293 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-deldir s390x 2.0-4-1 [271 kB] 253s Get:294 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcppeigen s390x 0.3.3.9.4-1 [1187 kB] 253s Get:295 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-interp s390x 1.1-6-1 [1465 kB] 253s Get:296 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-latticeextra all 0.6-30-1 [2198 kB] 253s Get:297 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-acepack s390x 1.4.2-1 [68.3 kB] 253s Get:298 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hmisc s390x 5.1-1-1 [3488 kB] 254s Get:299 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dichromat all 1:2.0-0.1-1 [148 kB] 254s Get:300 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 254s Get:301 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 254s Get:302 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 254s Get:303 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 254s Get:304 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 254s Get:305 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 254s Get:306 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 255s Get:307 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-1 [1410 kB] 255s Get:308 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1build1 [3700 kB] 255s Get:309 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 256s Get:310 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 256s Get:311 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 256s Get:312 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 256s Get:313 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 256s Get:314 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-bsgenome all 1.70.2-1 [6975 kB] 256s Get:315 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-variantannotation s390x 1.48.1-1 [3572 kB] 257s Get:316 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-protgenerics all 1.34.0-1 [225 kB] 257s Get:317 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 257s Get:318 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biovizbase s390x 1.50.0-1 [2665 kB] 257s Get:319 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 257s Get:320 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB] 257s Get:321 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-graph s390x 1.80.0-1 [1290 kB] 257s Get:322 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rbgl s390x 1.78.0+dfsg-1 [591 kB] 257s Get:323 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-organismdbi all 1.44.0+dfsg-1 [456 kB] 257s Get:324 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-broom all 1.0.5+dfsg-1 [1729 kB] 257s Get:325 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-forcats all 1.0.0-1 [369 kB] 257s Get:326 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB] 257s Get:327 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB] 257s Get:328 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB] 257s Get:329 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB] 257s Get:330 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-haven s390x 2.5.4-1 [355 kB] 257s Get:331 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-labelled all 2.12.0-2 [312 kB] 257s Get:332 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-broom.helpers all 1.14.0-2 [557 kB] 257s Get:333 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-patchwork all 1.2.0-1 [3161 kB] 257s Get:334 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggstats all 0.5.1-2 [839 kB] 257s Get:335 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ggally all 2.2.1-1 [2022 kB] 257s Get:336 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ggbio all 1.50.0-1 [2939 kB] 258s Get:337 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-brio s390x 1.1.4-1 [37.8 kB] 258s Get:338 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ps s390x 1.7.6-1 [313 kB] 258s Get:339 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-processx s390x 3.8.3-1 [364 kB] 258s Get:340 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-callr all 3.7.3-2 [425 kB] 258s Get:341 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 258s Get:342 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 258s Get:343 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgbuild all 1.4.3-1 [209 kB] 258s Get:344 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rprojroot all 2.0.4-1 [124 kB] 258s Get:345 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgload all 1.3.4-1 [207 kB] 258s Get:346 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 258s Get:347 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 258s Get:348 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-waldo all 0.5.2-1build1 [120 kB] 258s Get:349 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-testthat s390x 3.2.1-1 [1688 kB] 259s Preconfiguring packages ... 259s Fetched 505 MB in 23s (21.6 MB/s) 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 259s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 259s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 259s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 259s wget depends on libpsl5 (>= 0.16.0). 259s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 259s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 259s 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 259s Removing libpsl5:s390x (0.21.2-1build1) ... 259s Selecting previously unselected package libpsl5t64:s390x. 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 259s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 259s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 259s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 259s s390-tools depends on libcurl4 (>= 7.16.2). 259s 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 259s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 259s Selecting previously unselected package libcurl4t64:s390x. 259s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 259s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 259s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 259s Selecting previously unselected package libc-dev-bin. 259s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 259s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 259s Selecting previously unselected package linux-libc-dev:s390x. 259s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 259s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 259s Selecting previously unselected package libcrypt-dev:s390x. 259s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 259s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 259s Selecting previously unselected package libtirpc-dev:s390x. 259s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 259s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 259s Selecting previously unselected package libnsl-dev:s390x. 259s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 259s Unpacking libnsl-dev:s390x (1.3.0-3) ... 259s Selecting previously unselected package rpcsvc-proto. 259s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 259s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 259s Selecting previously unselected package libc6-dev:s390x. 259s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 259s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 259s Selecting previously unselected package libisl23:s390x. 259s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 259s Unpacking libisl23:s390x (0.26-3) ... 259s Selecting previously unselected package libmpc3:s390x. 259s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 259s Unpacking libmpc3:s390x (1.3.1-1) ... 259s Selecting previously unselected package cpp-13-s390x-linux-gnu. 259s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 259s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 260s Selecting previously unselected package cpp-13. 260s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 260s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 260s Selecting previously unselected package cpp-s390x-linux-gnu. 260s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 260s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 260s Selecting previously unselected package cpp. 260s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 260s Unpacking cpp (4:13.2.0-7ubuntu1) ... 260s Selecting previously unselected package libcc1-0:s390x. 260s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libgomp1:s390x. 260s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libitm1:s390x. 260s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libatomic1:s390x. 260s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libasan8:s390x. 260s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libubsan1:s390x. 260s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 260s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 260s Selecting previously unselected package libgcc-13-dev:s390x. 260s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 260s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 260s Selecting previously unselected package gcc-13-s390x-linux-gnu. 260s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 260s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 260s Selecting previously unselected package gcc-13. 260s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 260s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 260s Selecting previously unselected package gcc-s390x-linux-gnu. 260s Preparing to unpack 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.../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 261s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 261s Selecting previously unselected package g++. 261s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 261s Unpacking g++ (4:13.2.0-7ubuntu1) ... 261s Selecting previously unselected package build-essential. 261s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 261s Unpacking build-essential (12.10ubuntu1) ... 261s Selecting previously unselected package dctrl-tools. 261s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 261s Unpacking dctrl-tools (2.24-3build2) ... 261s Selecting previously unselected package libfreetype6:s390x. 261s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 261s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 261s Selecting previously unselected package fonts-dejavu-mono. 261s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 261s Unpacking fonts-dejavu-mono (2.37-8) ... 261s Selecting previously unselected package fonts-dejavu-core. 261s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 261s Unpacking fonts-dejavu-core (2.37-8) ... 261s Selecting previously unselected package fontconfig-config. 261s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 261s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 261s Selecting previously unselected package libfontconfig1:s390x. 261s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 261s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 261s Selecting previously unselected package fontconfig. 261s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 261s Unpacking fontconfig (2.15.0-1ubuntu1) ... 261s Selecting previously unselected package fonts-font-awesome. 261s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 261s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 261s Selecting previously unselected package fonts-glyphicons-halflings. 261s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 261s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 261s Selecting previously unselected package fonts-lmodern. 261s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 261s Unpacking fonts-lmodern (2.005-1) ... 261s Selecting previously unselected package fonts-mathjax. 261s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 261s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 262s Selecting previously unselected package libgfortran5:s390x. 262s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 262s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 262s Selecting previously unselected package libgfortran-13-dev:s390x. 262s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 262s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 262s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 262s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 262s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 262s Selecting previously unselected package gfortran-13. 262s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 262s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 262s Selecting previously unselected package gfortran-s390x-linux-gnu. 262s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 262s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 262s Selecting previously unselected package gfortran. 262s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 262s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 262s Selecting previously unselected package icu-devtools. 262s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 262s Unpacking icu-devtools (74.2-1ubuntu1) ... 262s Selecting previously unselected package javascript-common. 262s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 262s Unpacking javascript-common (11+nmu1) ... 262s Selecting previously unselected package libio-string-perl. 262s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 262s Unpacking libio-string-perl (1.08-4) ... 262s Selecting previously unselected package liblatex-tounicode-perl. 262s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 262s Unpacking liblatex-tounicode-perl (0.54-2) ... 262s Selecting previously unselected package libbibtex-parser-perl. 262s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 262s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 262s Selecting previously unselected package libblas3:s390x. 262s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 262s Unpacking libblas3:s390x (3.12.0-3) ... 262s Selecting previously unselected package libblas-dev:s390x. 262s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 262s Unpacking libblas-dev:s390x (3.12.0-3) ... 262s Selecting previously unselected package libboost1.83-dev:s390x. 262s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 262s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 264s Selecting previously unselected package libboost-dev:s390x. 264s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 264s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 264s Selecting previously unselected package libbz2-dev:s390x. 264s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 264s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 264s Selecting previously unselected package libpixman-1-0:s390x. 264s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 264s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 264s Selecting previously unselected package libxcb-render0:s390x. 264s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 264s Unpacking libxcb-render0:s390x (1.15-1) ... 264s Selecting previously unselected package libxcb-shm0:s390x. 264s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 264s Unpacking libxcb-shm0:s390x (1.15-1) ... 264s Selecting previously unselected package libxrender1:s390x. 264s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 264s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 264s Selecting previously unselected package libcairo2:s390x. 264s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 264s Unpacking libcairo2:s390x (1.18.0-1) ... 264s Selecting previously unselected package libdatrie1:s390x. 264s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 264s Unpacking libdatrie1:s390x (0.2.13-3) ... 264s Selecting previously unselected package libdeflate0:s390x. 264s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 264s Unpacking libdeflate0:s390x (1.19-1) ... 264s Selecting previously unselected package libgraphite2-3:s390x. 264s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 264s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 264s Selecting previously unselected package libharfbuzz0b:s390x. 264s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 264s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 264s Selecting previously unselected package x11-common. 264s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 264s Unpacking x11-common (1:7.7+23ubuntu2) ... 264s Selecting previously unselected package libice6:s390x. 264s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 264s Unpacking libice6:s390x (2:1.0.10-1build2) ... 264s Selecting previously unselected package libicu-dev:s390x. 264s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 264s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 265s Selecting previously unselected package libjpeg-turbo8:s390x. 265s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 265s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 265s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 265s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 265s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 265s Selecting previously unselected package libjpeg8:s390x. 265s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 265s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 265s Selecting previously unselected package libjpeg8-dev:s390x. 265s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 265s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 265s Selecting previously unselected package libjpeg-dev:s390x. 265s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 265s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 265s Selecting previously unselected package libjs-bootstrap. 265s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 265s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 265s Selecting previously unselected package libjs-popper.js. 265s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 265s Unpacking libjs-popper.js (1.16.1+ds-6) ... 265s Selecting previously unselected package libjs-bootstrap4. 265s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 265s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 265s Selecting previously unselected package libjs-d3. 265s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 265s Unpacking libjs-d3 (3.5.17-4) ... 265s Selecting previously unselected package libjs-es5-shim. 265s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 265s Unpacking libjs-es5-shim (4.6.7-2) ... 265s Selecting previously unselected package libjs-highlight.js. 265s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 265s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 265s Selecting previously unselected package libjs-jquery. 265s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 265s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 265s Selecting previously unselected package libjs-jquery-datatables. 265s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 265s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 265s Selecting previously unselected package libjs-sifter.js. 265s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 265s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 265s Selecting previously unselected package libjs-microplugin.js. 265s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 265s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 265s Selecting previously unselected package libjs-jquery-selectize.js. 265s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb 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(2023.20230311.66589-9) ... 265s Selecting previously unselected package liblapack3:s390x. 265s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 265s Unpacking liblapack3:s390x (3.12.0-3) ... 265s Selecting previously unselected package liblapack-dev:s390x. 265s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 265s Unpacking liblapack-dev:s390x (3.12.0-3) ... 266s Selecting previously unselected package liblua5.4-0:s390x. 266s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 266s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 266s Selecting previously unselected package libncurses-dev:s390x. 266s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 266s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 266s Selecting previously unselected package libthai-data. 266s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 266s Unpacking libthai-data (0.1.29-2) ... 266s Selecting previously unselected package libthai0:s390x. 266s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 266s Unpacking libthai0:s390x (0.1.29-2) ... 266s Selecting previously unselected package libpango-1.0-0:s390x. 266s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 266s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 266s Selecting previously unselected package libpangoft2-1.0-0:s390x. 266s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 266s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 266s Selecting previously unselected package libpangocairo-1.0-0:s390x. 266s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 266s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 266s Selecting previously unselected package libpaper1:s390x. 266s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 266s Unpacking libpaper1:s390x (1.1.29) ... 266s Selecting previously unselected package libpaper-utils. 266s Preparing to unpack .../101-libpaper-utils_1.1.29_s390x.deb ... 266s Unpacking libpaper-utils (1.1.29) ... 266s Selecting previously unselected package libpcre2-16-0:s390x. 266s Preparing to unpack .../102-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 266s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 266s Selecting previously unselected package libpcre2-32-0:s390x. 266s Preparing to unpack .../103-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 266s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 266s Selecting previously unselected package libpcre2-posix3:s390x. 266s Preparing to unpack .../104-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 266s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 266s Selecting previously unselected package libpcre2-dev:s390x. 266s Preparing to unpack .../105-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 266s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 266s Selecting previously unselected package libpkgconf3:s390x. 266s Preparing to unpack .../106-libpkgconf3_1.8.1-2_s390x.deb ... 266s Unpacking libpkgconf3:s390x (1.8.1-2) ... 266s Selecting previously unselected package zlib1g-dev:s390x. 266s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 266s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 266s Selecting previously unselected package libpng-dev:s390x. 266s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 266s Unpacking libpng-dev:s390x (1.6.43-1) ... 266s Selecting previously unselected package libpotrace0:s390x. 266s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 266s Unpacking libpotrace0:s390x (1.16-2) ... 266s Selecting previously unselected package libptexenc1:s390x. 266s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 266s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 266s Selecting previously unselected package libreadline-dev:s390x. 266s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 266s Unpacking libreadline-dev:s390x (8.2-3) ... 266s Selecting previously unselected package libsharpyuv0:s390x. 266s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 266s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 266s Selecting previously unselected package libsm6:s390x. 266s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 266s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 266s Selecting previously unselected package libsynctex2:s390x. 266s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 266s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 266s Selecting previously unselected package libtcl8.6:s390x. 266s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 266s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 266s Selecting previously unselected package libteckit0:s390x. 266s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 266s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 266s Selecting previously unselected package libtexlua53-5:s390x. 266s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 266s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 266s Selecting previously unselected package libjbig0:s390x. 266s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 266s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 266s Selecting previously unselected package libwebp7:s390x. 266s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 266s Unpacking libwebp7:s390x (1.3.2-0.4) ... 266s Selecting previously unselected package libtiff6:s390x. 266s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 266s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 266s Selecting previously unselected package libxft2:s390x. 266s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 266s Unpacking libxft2:s390x (2.3.6-1) ... 266s Selecting previously unselected package libxss1:s390x. 266s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 266s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 266s Selecting previously unselected package libtk8.6:s390x. 266s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 266s Unpacking libtk8.6:s390x (8.6.13-2) ... 266s Selecting previously unselected package libxt6:s390x. 266s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 266s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 266s Selecting previously unselected package libxmu6:s390x. 266s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 266s Unpacking libxmu6:s390x (2:1.1.3-3) ... 266s Selecting previously unselected package libxpm4:s390x. 266s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 266s Unpacking libxpm4:s390x (1:3.5.17-1) ... 266s Selecting previously unselected package libxaw7:s390x. 266s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 266s Unpacking libxaw7:s390x (2:1.0.14-1) ... 266s Selecting previously unselected package libxi6:s390x. 266s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 266s Unpacking libxi6:s390x (2:1.8.1-1) ... 266s Selecting previously unselected package libzzip-0-13:s390x. 266s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 266s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 266s Selecting previously unselected package zip. 266s Preparing to unpack .../130-zip_3.0-13_s390x.deb ... 266s Unpacking zip (3.0-13) ... 266s Selecting previously unselected package unzip. 266s Preparing to unpack .../131-unzip_6.0-28ubuntu3_s390x.deb ... 266s Unpacking unzip (6.0-28ubuntu3) ... 266s Selecting previously unselected package xdg-utils. 266s Preparing to unpack .../132-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 266s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 266s Selecting previously unselected package r-base-core. 266s Preparing to unpack .../133-r-base-core_4.3.2-1build1_s390x.deb ... 266s Unpacking r-base-core (4.3.2-1build1) ... 267s Selecting previously unselected package r-cran-littler. 267s Preparing to unpack .../134-r-cran-littler_0.3.19-1_s390x.deb ... 267s Unpacking r-cran-littler (0.3.19-1) ... 267s Selecting previously unselected package littler. 267s Preparing to unpack .../135-littler_0.3.19-1_all.deb ... 267s Unpacking littler (0.3.19-1) ... 267s Selecting previously unselected package node-bootstrap-sass. 267s Preparing to unpack .../136-node-bootstrap-sass_3.4.3-2_all.deb ... 267s Unpacking node-bootstrap-sass (3.4.3-2) ... 267s Selecting previously unselected package node-html5shiv. 267s Preparing to unpack .../137-node-html5shiv_3.7.3+dfsg-5_all.deb ... 267s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 267s Selecting previously unselected package node-normalize.css. 267s Preparing to unpack .../138-node-normalize.css_8.0.1-5_all.deb ... 267s Unpacking node-normalize.css (8.0.1-5) ... 267s Selecting previously unselected package pandoc-data. 267s Preparing to unpack .../139-pandoc-data_3.1.3-1_all.deb ... 267s Unpacking pandoc-data (3.1.3-1) ... 267s Selecting previously unselected package pandoc. 267s Preparing to unpack .../140-pandoc_3.1.3+ds-2_s390x.deb ... 267s Unpacking pandoc (3.1.3+ds-2) ... 269s Selecting previously unselected package pkgconf-bin. 269s Preparing to unpack .../141-pkgconf-bin_1.8.1-2_s390x.deb ... 269s Unpacking pkgconf-bin (1.8.1-2) ... 269s Selecting previously unselected package pkgconf:s390x. 269s Preparing to unpack .../142-pkgconf_1.8.1-2_s390x.deb ... 269s Unpacking pkgconf:s390x (1.8.1-2) ... 269s Selecting previously unselected package pkg-config:s390x. 269s Preparing to unpack .../143-pkg-config_1.8.1-2_s390x.deb ... 269s Unpacking pkg-config:s390x (1.8.1-2) ... 269s Selecting previously unselected package liblzma-dev:s390x. 269s Preparing to unpack .../144-liblzma-dev_5.4.5-0.3_s390x.deb ... 269s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 269s Selecting previously unselected package r-base-dev. 269s Preparing to unpack .../145-r-base-dev_4.3.2-1build1_all.deb ... 269s Unpacking r-base-dev (4.3.2-1build1) ... 269s Selecting previously unselected package pkg-r-autopkgtest. 269s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 269s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 269s Selecting previously unselected package r-bioc-biocgenerics. 269s Preparing to unpack .../147-r-bioc-biocgenerics_0.48.1-2_all.deb ... 269s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 269s Selecting previously unselected package r-bioc-biobase. 269s Preparing to unpack .../148-r-bioc-biobase_2.62.0-1_s390x.deb ... 269s Unpacking r-bioc-biobase (2.62.0-1) ... 269s Selecting previously unselected package r-bioc-s4vectors. 269s Preparing to unpack .../149-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 269s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 269s Selecting previously unselected package r-bioc-iranges. 269s Preparing to unpack .../150-r-bioc-iranges_2.36.0-1_s390x.deb ... 269s Unpacking r-bioc-iranges (2.36.0-1) ... 269s Selecting previously unselected package r-cran-dbi. 269s Preparing to unpack .../151-r-cran-dbi_1.2.2-1_all.deb ... 269s Unpacking r-cran-dbi (1.2.2-1) ... 269s Selecting previously unselected package r-cran-bit. 269s Preparing to unpack .../152-r-cran-bit_4.0.5-1_s390x.deb ... 269s Unpacking r-cran-bit (4.0.5-1) ... 269s Selecting previously unselected package r-cran-bit64. 269s Preparing to unpack .../153-r-cran-bit64_4.0.5-1_s390x.deb ... 269s Unpacking r-cran-bit64 (4.0.5-1) ... 269s Selecting previously unselected package r-cran-rlang. 269s Preparing to unpack .../154-r-cran-rlang_1.1.3-1_s390x.deb ... 269s Unpacking r-cran-rlang (1.1.3-1) ... 269s Selecting previously unselected package r-cran-cli. 269s Preparing to unpack .../155-r-cran-cli_3.6.2-1_s390x.deb ... 269s Unpacking r-cran-cli (3.6.2-1) ... 269s Selecting previously unselected package r-cran-glue. 269s Preparing to unpack .../156-r-cran-glue_1.7.0-1_s390x.deb ... 269s Unpacking r-cran-glue (1.7.0-1) ... 269s Selecting previously unselected package r-cran-lifecycle. 269s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 269s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 269s Selecting previously unselected package r-cran-vctrs. 269s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_s390x.deb ... 269s Unpacking r-cran-vctrs (0.6.5-1) ... 269s Selecting previously unselected package r-cran-blob. 269s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 269s Unpacking r-cran-blob (1.2.4-1) ... 269s Selecting previously unselected package r-cran-fastmap. 269s Preparing to unpack .../160-r-cran-fastmap_1.1.1-1_s390x.deb ... 269s Unpacking r-cran-fastmap (1.1.1-1) ... 269s Selecting previously unselected package r-cran-cachem. 269s Preparing to unpack .../161-r-cran-cachem_1.0.8-1_s390x.deb ... 269s Unpacking r-cran-cachem (1.0.8-1) ... 269s Selecting previously unselected package r-cran-memoise. 269s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 269s Unpacking r-cran-memoise (2.0.1-1) ... 269s Selecting previously unselected package r-cran-pkgconfig. 269s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 269s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 269s Selecting previously unselected package r-cran-plogr. 269s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 269s Unpacking r-cran-plogr (0.2.0-3build1) ... 269s Selecting previously unselected package r-cran-cpp11. 269s Preparing to unpack .../165-r-cran-cpp11_0.4.7-1_all.deb ... 269s Unpacking r-cran-cpp11 (0.4.7-1) ... 269s Selecting previously unselected package r-cran-rsqlite. 269s Preparing to unpack .../166-r-cran-rsqlite_2.3.4-1_s390x.deb ... 269s Unpacking r-cran-rsqlite (2.3.4-1) ... 269s Selecting previously unselected package r-cran-curl. 269s Preparing to unpack .../167-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 269s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 269s Selecting previously unselected package r-cran-jsonlite. 269s Preparing to unpack .../168-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 269s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 269s Selecting previously unselected package r-cran-mime. 269s Preparing to unpack .../169-r-cran-mime_0.12-1_s390x.deb ... 269s Unpacking r-cran-mime (0.12-1) ... 269s Selecting previously unselected package r-cran-sys. 269s Preparing to unpack .../170-r-cran-sys_3.4.2-1_s390x.deb ... 269s Unpacking r-cran-sys (3.4.2-1) ... 269s Selecting previously unselected package r-cran-askpass. 269s Preparing to unpack .../171-r-cran-askpass_1.2.0-1_s390x.deb ... 269s Unpacking r-cran-askpass (1.2.0-1) ... 269s Selecting previously unselected package r-cran-openssl. 269s Preparing to unpack .../172-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 269s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 270s Selecting previously unselected package r-cran-r6. 270s Preparing to unpack .../173-r-cran-r6_2.5.1-1_all.deb ... 270s Unpacking r-cran-r6 (2.5.1-1) ... 270s Selecting previously unselected package r-cran-httr. 270s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 270s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 270s Selecting previously unselected package r-cran-png. 270s Preparing to unpack .../175-r-cran-png_0.1-8-1_s390x.deb ... 270s Unpacking r-cran-png (0.1-8-1) ... 270s Selecting previously unselected package r-bioc-zlibbioc. 270s Preparing to unpack .../176-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 270s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 270s Selecting previously unselected package r-bioc-xvector. 270s Preparing to unpack .../177-r-bioc-xvector_0.42.0-1_s390x.deb ... 270s Unpacking r-bioc-xvector (0.42.0-1) ... 270s Selecting previously unselected package r-cran-bitops. 270s Preparing to unpack .../178-r-cran-bitops_1.0-7-1_s390x.deb ... 270s Unpacking r-cran-bitops (1.0-7-1) ... 270s Selecting previously unselected package r-cran-rcurl. 270s Preparing to unpack .../179-r-cran-rcurl_1.98-1.14+dfsg-1_s390x.deb ... 270s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 270s Selecting previously unselected package r-bioc-genomeinfodbdata. 270s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 270s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 270s Selecting previously unselected package r-bioc-genomeinfodb. 270s Preparing to unpack .../181-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 270s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 270s Selecting previously unselected package r-cran-crayon. 270s Preparing to unpack .../182-r-cran-crayon_1.5.2-1_all.deb ... 270s Unpacking r-cran-crayon (1.5.2-1) ... 270s Selecting previously unselected package r-bioc-biostrings. 270s Preparing to unpack .../183-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 270s Selecting previously unselected package r-bioc-keggrest. 270s Preparing to unpack .../184-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 270s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 270s Selecting previously unselected package r-bioc-annotationdbi. 270s Preparing to unpack .../185-r-bioc-annotationdbi_1.64.1-1_all.deb ... 270s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 270s Selecting previously unselected package r-bioc-genomicranges. 270s Preparing to unpack .../186-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 270s Selecting previously unselected package r-cran-lazyeval. 270s Preparing to unpack .../187-r-cran-lazyeval_0.2.2-1build1_s390x.deb ... 270s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 270s Selecting previously unselected package r-bioc-annotationfilter. 270s Preparing to unpack .../188-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 270s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 270s Selecting previously unselected package r-cran-generics. 270s Preparing to unpack .../189-r-cran-generics_0.1.3-1_all.deb ... 270s Unpacking r-cran-generics (0.1.3-1) ... 270s Selecting previously unselected package r-cran-magrittr. 270s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_s390x.deb ... 270s Unpacking r-cran-magrittr (2.0.3-1) ... 270s Selecting previously unselected package r-cran-fansi. 270s Preparing to unpack .../191-r-cran-fansi_1.0.5-1_s390x.deb ... 270s Unpacking r-cran-fansi (1.0.5-1) ... 270s Selecting previously unselected package r-cran-utf8. 270s Preparing to unpack .../192-r-cran-utf8_1.2.4-1_s390x.deb ... 270s Unpacking r-cran-utf8 (1.2.4-1) ... 270s Selecting previously unselected package r-cran-pillar. 270s Preparing to unpack .../193-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 270s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 270s Selecting previously unselected package r-cran-tibble. 270s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 270s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 270s Selecting previously unselected package r-cran-withr. 270s Preparing to unpack .../195-r-cran-withr_2.5.0-1_all.deb ... 270s Unpacking r-cran-withr (2.5.0-1) ... 270s Selecting previously unselected package r-cran-tidyselect. 270s Preparing to unpack .../196-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 270s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 270s Selecting previously unselected package r-cran-dplyr. 270s Preparing to unpack .../197-r-cran-dplyr_1.1.4-1_s390x.deb ... 270s Unpacking r-cran-dplyr (1.1.4-1) ... 270s Selecting previously unselected package r-cran-purrr. 270s Preparing to unpack .../198-r-cran-purrr_1.0.2-1_s390x.deb ... 270s Unpacking r-cran-purrr (1.0.2-1) ... 270s Selecting previously unselected package r-cran-stringi. 270s Preparing to unpack .../199-r-cran-stringi_1.8.3-1_s390x.deb ... 270s Unpacking r-cran-stringi (1.8.3-1) ... 270s Selecting previously unselected package r-cran-stringr. 270s Preparing to unpack .../200-r-cran-stringr_1.5.1-1_all.deb ... 270s Unpacking r-cran-stringr (1.5.1-1) ... 271s Selecting previously unselected package r-cran-tidyr. 271s Preparing to unpack .../201-r-cran-tidyr_1.3.1-1_s390x.deb ... 271s Unpacking r-cran-tidyr (1.3.1-1) ... 271s Selecting previously unselected package r-cran-dbplyr. 271s Preparing to unpack .../202-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 271s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 271s Selecting previously unselected package r-cran-filelock. 271s Preparing to unpack .../203-r-cran-filelock_1.0.3-1_s390x.deb ... 271s Unpacking r-cran-filelock (1.0.3-1) ... 271s Selecting previously unselected package r-bioc-biocfilecache. 271s Preparing to unpack .../204-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 271s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 271s Selecting previously unselected package r-bioc-biocio. 271s Preparing to unpack .../205-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 271s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 271s Selecting previously unselected package r-cran-formatr. 271s Preparing to unpack .../206-r-cran-formatr_1.14-1_all.deb ... 271s Unpacking r-cran-formatr (1.14-1) ... 271s Selecting previously unselected package r-cran-lambda.r. 271s Preparing to unpack .../207-r-cran-lambda.r_1.2.4-2build1_all.deb ... 271s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 271s Selecting previously unselected package r-cran-futile.options. 271s Preparing to unpack .../208-r-cran-futile.options_1.0.1-3build1_all.deb ... 271s Unpacking r-cran-futile.options (1.0.1-3build1) ... 271s Selecting previously unselected package r-cran-futile.logger. 271s Preparing to unpack .../209-r-cran-futile.logger_1.4.3-4build1_all.deb ... 271s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 271s Selecting previously unselected package r-cran-snow. 271s Preparing to unpack .../210-r-cran-snow_1%3a0.4.4-2_all.deb ... 271s Unpacking r-cran-snow (1:0.4.4-2) ... 271s Selecting previously unselected package r-cran-codetools. 271s Preparing to unpack .../211-r-cran-codetools_0.2-19-1_all.deb ... 271s Unpacking r-cran-codetools (0.2-19-1) ... 271s Selecting previously unselected package r-cran-bh. 271s Preparing to unpack .../212-r-cran-bh_1.84.0-1_all.deb ... 271s Unpacking r-cran-bh (1.84.0-1) ... 271s Selecting previously unselected package r-bioc-biocparallel. 271s Preparing to unpack .../213-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 271s Unpacking r-bioc-biocparallel (1.36.0-1) ... 271s Selecting previously unselected package r-cran-base64enc. 271s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3_s390x.deb ... 271s Unpacking r-cran-base64enc (0.1-3-3) ... 271s Selecting previously unselected package r-cran-digest. 271s Preparing to unpack .../215-r-cran-digest_0.6.34-1_s390x.deb ... 271s Unpacking r-cran-digest (0.6.34-1) ... 271s Selecting previously unselected package r-cran-ellipsis. 271s Preparing to unpack .../216-r-cran-ellipsis_0.3.2-2_s390x.deb ... 271s Unpacking r-cran-ellipsis (0.3.2-2) ... 271s Selecting previously unselected package r-cran-htmltools. 271s Preparing to unpack .../217-r-cran-htmltools_0.5.7-1_s390x.deb ... 271s Unpacking r-cran-htmltools (0.5.7-1) ... 271s Selecting previously unselected package r-cran-evaluate. 271s Preparing to unpack .../218-r-cran-evaluate_0.23-1_all.deb ... 271s Unpacking r-cran-evaluate (0.23-1) ... 271s Selecting previously unselected package r-cran-xfun. 271s Preparing to unpack .../219-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 271s Unpacking r-cran-xfun (0.41+dfsg-1) ... 271s Selecting previously unselected package r-cran-highr. 271s Preparing to unpack .../220-r-cran-highr_0.10+dfsg-1_all.deb ... 271s Unpacking r-cran-highr (0.10+dfsg-1) ... 271s Selecting previously unselected package r-cran-yaml. 271s Preparing to unpack .../221-r-cran-yaml_2.3.8-1_s390x.deb ... 271s Unpacking r-cran-yaml (2.3.8-1) ... 271s Selecting previously unselected package libjs-mathjax. 271s Preparing to unpack .../222-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 271s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 272s Selecting previously unselected package r-cran-knitr. 272s Preparing to unpack .../223-r-cran-knitr_1.45+dfsg-1_all.deb ... 272s Unpacking r-cran-knitr (1.45+dfsg-1) ... 272s Selecting previously unselected package r-cran-jquerylib. 272s Preparing to unpack .../224-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 272s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 272s Selecting previously unselected package r-cran-fs. 272s Preparing to unpack .../225-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 272s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 272s Selecting previously unselected package r-cran-rappdirs. 272s Preparing to unpack .../226-r-cran-rappdirs_0.3.3-1_s390x.deb ... 272s Unpacking r-cran-rappdirs (0.3.3-1) ... 272s Selecting previously unselected package r-cran-sass. 272s Preparing to unpack .../227-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 272s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 272s Selecting previously unselected package r-cran-bslib. 272s Preparing to unpack .../228-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 272s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 272s Selecting previously unselected package r-cran-fontawesome. 272s Preparing to unpack .../229-r-cran-fontawesome_0.5.2-1_all.deb ... 272s Unpacking r-cran-fontawesome (0.5.2-1) ... 272s Selecting previously unselected package r-cran-tinytex. 272s Preparing to unpack .../230-r-cran-tinytex_0.49-1_all.deb ... 272s Unpacking r-cran-tinytex (0.49-1) ... 272s Selecting previously unselected package libjs-modernizr. 272s Preparing to unpack .../231-libjs-modernizr_2.6.2+ds1-5_all.deb ... 272s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 272s Selecting previously unselected package r-cran-pkgkitten. 272s Preparing to unpack .../232-r-cran-pkgkitten_0.2.3-1_all.deb ... 272s Unpacking r-cran-pkgkitten (0.2.3-1) ... 272s Selecting previously unselected package r-cran-rcpp. 272s Preparing to unpack .../233-r-cran-rcpp_1.0.12-1_s390x.deb ... 272s Unpacking r-cran-rcpp (1.0.12-1) ... 273s Selecting previously unselected package r-cran-later. 273s Preparing to unpack .../234-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 273s Unpacking r-cran-later (1.3.2+dfsg-1) ... 273s Selecting previously unselected package r-cran-promises. 273s Preparing to unpack .../235-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 273s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 273s Selecting previously unselected package r-cran-httpuv. 273s Preparing to unpack .../236-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 273s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 273s Selecting previously unselected package r-cran-xtable. 273s Preparing to unpack .../237-r-cran-xtable_1%3a1.8-4-2_all.deb ... 273s Unpacking r-cran-xtable (1:1.8-4-2) ... 273s Selecting previously unselected package r-cran-sourcetools. 273s Preparing to unpack .../238-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 273s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 273s Selecting previously unselected package r-cran-commonmark. 273s Preparing to unpack .../239-r-cran-commonmark_1.9.1-1_s390x.deb ... 273s Unpacking r-cran-commonmark (1.9.1-1) ... 273s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 273s Preparing to unpack .../240-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 273s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 273s Selecting previously unselected package r-cran-shiny. 273s Preparing to unpack .../241-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 273s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 273s Selecting previously unselected package r-cran-rmarkdown. 273s Preparing to unpack .../242-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 273s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 273s Selecting previously unselected package r-cran-bookdown. 273s Preparing to unpack .../243-r-cran-bookdown_0.37+dfsg-1_all.deb ... 273s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 273s Selecting previously unselected package r-cran-biocmanager. 273s Preparing to unpack .../244-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 273s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 273s Selecting previously unselected package tex-common. 273s Preparing to unpack .../245-tex-common_6.18_all.deb ... 273s Unpacking tex-common (6.18) ... 273s Selecting previously unselected package t1utils. 273s Preparing to unpack .../246-t1utils_1.41-4build2_s390x.deb ... 273s Unpacking t1utils (1.41-4build2) ... 273s Selecting previously unselected package texlive-binaries. 273s Preparing to unpack .../247-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 273s Unpacking texlive-binaries (2023.20230311.66589-9) ... 274s Selecting previously unselected package texlive-base. 274s Preparing to unpack .../248-texlive-base_2023.20240207-1_all.deb ... 274s Unpacking texlive-base (2023.20240207-1) ... 276s Selecting previously unselected package texlive-latex-base. 276s Preparing to unpack .../249-texlive-latex-base_2023.20240207-1_all.deb ... 276s Unpacking texlive-latex-base (2023.20240207-1) ... 276s Selecting previously unselected package texlive-bibtex-extra. 276s Preparing to unpack .../250-texlive-bibtex-extra_2023.20240207-1_all.deb ... 276s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 283s Selecting previously unselected package r-bioc-biocstyle. 283s Preparing to unpack .../251-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 283s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 283s Selecting previously unselected package r-cran-xml. 283s Preparing to unpack .../252-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 283s Unpacking r-cran-xml (3.99-0.16.1-1) ... 283s Selecting previously unselected package r-cran-hms. 283s Preparing to unpack .../253-r-cran-hms_1.1.3-1_all.deb ... 283s Unpacking r-cran-hms (1.1.3-1) ... 283s Selecting previously unselected package r-cran-prettyunits. 283s Preparing to unpack .../254-r-cran-prettyunits_1.2.0-1_all.deb ... 283s Unpacking r-cran-prettyunits (1.2.0-1) ... 283s Selecting previously unselected package r-cran-progress. 283s Preparing to unpack .../255-r-cran-progress_1.2.3-1_all.deb ... 283s Unpacking r-cran-progress (1.2.3-1) ... 283s Selecting previously unselected package r-cran-xml2. 283s Preparing to unpack .../256-r-cran-xml2_1.3.6-1_s390x.deb ... 283s Unpacking r-cran-xml2 (1.3.6-1) ... 284s Selecting previously unselected package r-bioc-biomart. 284s Preparing to unpack .../257-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 284s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 284s Selecting previously unselected package r-cran-farver. 284s Preparing to unpack .../258-r-cran-farver_2.1.1-1_s390x.deb ... 284s Unpacking r-cran-farver (2.1.1-1) ... 284s Selecting previously unselected package r-cran-labeling. 284s Preparing to unpack .../259-r-cran-labeling_0.4.3-1_all.deb ... 284s Unpacking r-cran-labeling (0.4.3-1) ... 284s Selecting previously unselected package r-cran-colorspace. 284s Preparing to unpack .../260-r-cran-colorspace_2.1-0+dfsg-1_s390x.deb ... 284s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 284s Selecting previously unselected package r-cran-munsell. 284s Preparing to unpack .../261-r-cran-munsell_0.5.0-2build1_all.deb ... 284s Unpacking r-cran-munsell (0.5.0-2build1) ... 284s Selecting previously unselected package r-cran-rcolorbrewer. 284s Preparing to unpack .../262-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 284s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 284s Selecting previously unselected package r-cran-viridislite. 284s Preparing to unpack .../263-r-cran-viridislite_0.4.2-2_all.deb ... 284s Unpacking r-cran-viridislite (0.4.2-2) ... 284s Selecting previously unselected package r-cran-scales. 284s Preparing to unpack .../264-r-cran-scales_1.3.0-1_all.deb ... 284s Unpacking r-cran-scales (1.3.0-1) ... 284s Selecting previously unselected package r-cran-gtable. 284s Preparing to unpack .../265-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 284s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 284s Selecting previously unselected package r-cran-isoband. 284s Preparing to unpack .../266-r-cran-isoband_0.2.7-1_s390x.deb ... 284s Unpacking r-cran-isoband (0.2.7-1) ... 284s Selecting previously unselected package r-cran-mass. 284s Preparing to unpack .../267-r-cran-mass_7.3-60.0.1-1_s390x.deb ... 284s Unpacking r-cran-mass (7.3-60.0.1-1) ... 284s Selecting previously unselected package r-cran-lattice. 284s Preparing to unpack .../268-r-cran-lattice_0.22-5-1_s390x.deb ... 284s Unpacking r-cran-lattice (0.22-5-1) ... 284s Selecting previously unselected package r-cran-nlme. 284s Preparing to unpack .../269-r-cran-nlme_3.1.164-1_s390x.deb ... 284s Unpacking r-cran-nlme (3.1.164-1) ... 284s Selecting previously unselected package r-cran-matrix. 284s Preparing to unpack .../270-r-cran-matrix_1.6-5-1_s390x.deb ... 284s Unpacking r-cran-matrix (1.6-5-1) ... 284s Selecting previously unselected package r-cran-mgcv. 284s Preparing to unpack .../271-r-cran-mgcv_1.9-1-1_s390x.deb ... 284s Unpacking r-cran-mgcv (1.9-1-1) ... 284s Selecting previously unselected package r-cran-ggplot2. 284s Preparing to unpack .../272-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 284s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 284s Selecting previously unselected package r-cran-cluster. 284s Preparing to unpack .../273-r-cran-cluster_2.1.6-1_s390x.deb ... 284s Unpacking r-cran-cluster (2.1.6-1) ... 284s Selecting previously unselected package r-cran-survival. 284s Preparing to unpack .../274-r-cran-survival_3.5-8-1_s390x.deb ... 284s Unpacking r-cran-survival (3.5-8-1) ... 284s Selecting previously unselected package r-cran-rpart. 284s Preparing to unpack .../275-r-cran-rpart_4.1.23-1_s390x.deb ... 284s Unpacking r-cran-rpart (4.1.23-1) ... 284s Selecting previously unselected package r-cran-nnet. 284s Preparing to unpack .../276-r-cran-nnet_7.3-19-2_s390x.deb ... 284s Unpacking r-cran-nnet (7.3-19-2) ... 284s Selecting previously unselected package r-cran-foreign. 284s Preparing to unpack .../277-r-cran-foreign_0.8.86-1_s390x.deb ... 284s Unpacking r-cran-foreign (0.8.86-1) ... 284s Selecting previously unselected package r-cran-gridextra. 284s Preparing to unpack .../278-r-cran-gridextra_2.3-3build1_all.deb ... 284s Unpacking r-cran-gridextra (2.3-3build1) ... 284s Selecting previously unselected package r-cran-data.table. 284s Preparing to unpack .../279-r-cran-data.table_1.14.10+dfsg-1_s390x.deb ... 284s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 284s Selecting previously unselected package r-cran-backports. 284s Preparing to unpack .../280-r-cran-backports_1.4.1-1_s390x.deb ... 284s Unpacking r-cran-backports (1.4.1-1) ... 284s Selecting previously unselected package r-cran-checkmate. 285s Preparing to unpack .../281-r-cran-checkmate_2.3.1-1_s390x.deb ... 285s Unpacking r-cran-checkmate (2.3.1-1) ... 285s Selecting previously unselected package r-cran-htmlwidgets. 285s Preparing to unpack .../282-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 285s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 285s Selecting previously unselected package r-cran-rstudioapi. 285s Preparing to unpack .../283-r-cran-rstudioapi_0.15.0-1_all.deb ... 285s Unpacking r-cran-rstudioapi (0.15.0-1) ... 285s Selecting previously unselected package r-cran-htmltable. 285s Preparing to unpack .../284-r-cran-htmltable_2.4.2-1_all.deb ... 285s Unpacking r-cran-htmltable (2.4.2-1) ... 285s Selecting previously unselected package r-cran-viridis. 285s Preparing to unpack .../285-r-cran-viridis_0.6.5-1_all.deb ... 285s Unpacking r-cran-viridis (0.6.5-1) ... 285s Selecting previously unselected package r-cran-formula. 285s Preparing to unpack .../286-r-cran-formula_1.2-5-1_all.deb ... 285s Unpacking r-cran-formula (1.2-5-1) ... 285s Selecting previously unselected package r-cran-chron. 285s Preparing to unpack .../287-r-cran-chron_2.3-61-2_s390x.deb ... 285s Unpacking r-cran-chron (2.3-61-2) ... 285s Selecting previously unselected package r-cran-jpeg. 285s Preparing to unpack .../288-r-cran-jpeg_0.1-10-1_s390x.deb ... 285s Unpacking r-cran-jpeg (0.1-10-1) ... 285s Selecting previously unselected package r-cran-deldir. 285s Preparing to unpack .../289-r-cran-deldir_2.0-4-1_s390x.deb ... 285s Unpacking r-cran-deldir (2.0-4-1) ... 285s Selecting previously unselected package r-cran-rcppeigen. 285s Preparing to unpack .../290-r-cran-rcppeigen_0.3.3.9.4-1_s390x.deb ... 285s Unpacking r-cran-rcppeigen (0.3.3.9.4-1) ... 285s Selecting previously unselected package r-cran-interp. 285s Preparing to unpack .../291-r-cran-interp_1.1-6-1_s390x.deb ... 285s Unpacking r-cran-interp (1.1-6-1) ... 285s Selecting previously unselected package r-cran-latticeextra. 285s Preparing to unpack .../292-r-cran-latticeextra_0.6-30-1_all.deb ... 285s Unpacking r-cran-latticeextra (0.6-30-1) ... 285s Selecting previously unselected package r-cran-acepack. 285s Preparing to unpack .../293-r-cran-acepack_1.4.2-1_s390x.deb ... 285s Unpacking r-cran-acepack (1.4.2-1) ... 285s Selecting previously unselected package r-cran-hmisc. 285s Preparing to unpack .../294-r-cran-hmisc_5.1-1-1_s390x.deb ... 285s Unpacking r-cran-hmisc (5.1-1-1) ... 285s Selecting previously unselected package r-cran-dichromat. 285s Preparing to unpack .../295-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ... 285s Unpacking r-cran-dichromat (1:2.0-0.1-1) ... 285s Selecting previously unselected package r-cran-matrixstats. 285s Preparing to unpack .../296-r-cran-matrixstats_1.2.0-1_s390x.deb ... 285s Unpacking r-cran-matrixstats (1.2.0-1) ... 285s Selecting previously unselected package r-bioc-matrixgenerics. 285s Preparing to unpack .../297-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 285s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 285s Selecting previously unselected package r-cran-abind. 285s Preparing to unpack .../298-r-cran-abind_1.4-5-2_all.deb ... 285s Unpacking r-cran-abind (1.4-5-2) ... 285s Selecting previously unselected package r-bioc-s4arrays. 285s Preparing to unpack .../299-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 285s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 285s Selecting previously unselected package r-bioc-sparsearray. 285s Preparing to unpack .../300-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 285s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 285s Selecting previously unselected package r-bioc-delayedarray. 285s Preparing to unpack .../301-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 285s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 285s Selecting previously unselected package r-bioc-summarizedexperiment. 285s Preparing to unpack .../302-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 285s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 285s Selecting previously unselected package r-bioc-rhtslib. 285s Preparing to unpack .../303-r-bioc-rhtslib_2.4.1+dfsg-1_s390x.deb ... 285s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 285s Selecting previously unselected package r-bioc-rsamtools. 285s Preparing to unpack .../304-r-bioc-rsamtools_2.18.0+dfsg-1build1_s390x.deb ... 285s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 285s Selecting previously unselected package r-bioc-genomicalignments. 285s Preparing to unpack .../305-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 285s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 285s Selecting previously unselected package r-cran-rjson. 285s Preparing to unpack .../306-r-cran-rjson_0.2.21-1_s390x.deb ... 285s Unpacking r-cran-rjson (0.2.21-1) ... 285s Selecting previously unselected package r-cran-restfulr. 285s Preparing to unpack .../307-r-cran-restfulr_0.0.15-1_s390x.deb ... 285s Unpacking r-cran-restfulr (0.0.15-1) ... 286s Selecting previously unselected package r-bioc-rtracklayer. 286s Preparing to unpack .../308-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 286s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 286s Selecting previously unselected package r-bioc-genomicfeatures. 286s Preparing to unpack .../309-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 286s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 286s Selecting previously unselected package r-bioc-bsgenome. 286s Preparing to unpack .../310-r-bioc-bsgenome_1.70.2-1_all.deb ... 286s Unpacking r-bioc-bsgenome (1.70.2-1) ... 286s Selecting previously unselected package r-bioc-variantannotation. 286s Preparing to unpack .../311-r-bioc-variantannotation_1.48.1-1_s390x.deb ... 286s Unpacking r-bioc-variantannotation (1.48.1-1) ... 286s Selecting previously unselected package r-bioc-protgenerics. 286s Preparing to unpack .../312-r-bioc-protgenerics_1.34.0-1_all.deb ... 286s Unpacking r-bioc-protgenerics (1.34.0-1) ... 286s Selecting previously unselected package r-bioc-ensembldb. 286s Preparing to unpack .../313-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 286s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 286s Selecting previously unselected package r-bioc-biovizbase. 286s Preparing to unpack .../314-r-bioc-biovizbase_1.50.0-1_s390x.deb ... 286s Unpacking r-bioc-biovizbase (1.50.0-1) ... 286s Selecting previously unselected package r-cran-plyr. 286s Preparing to unpack .../315-r-cran-plyr_1.8.9-1_s390x.deb ... 286s Unpacking r-cran-plyr (1.8.9-1) ... 286s Selecting previously unselected package r-cran-reshape2. 286s Preparing to unpack .../316-r-cran-reshape2_1.4.4-2build1_s390x.deb ... 286s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 286s Selecting previously unselected package r-bioc-graph. 286s Preparing to unpack .../317-r-bioc-graph_1.80.0-1_s390x.deb ... 286s Unpacking r-bioc-graph (1.80.0-1) ... 286s Selecting previously unselected package r-bioc-rbgl. 286s Preparing to unpack .../318-r-bioc-rbgl_1.78.0+dfsg-1_s390x.deb ... 286s Unpacking r-bioc-rbgl (1.78.0+dfsg-1) ... 286s Selecting previously unselected package r-bioc-organismdbi. 286s Preparing to unpack .../319-r-bioc-organismdbi_1.44.0+dfsg-1_all.deb ... 286s Unpacking r-bioc-organismdbi (1.44.0+dfsg-1) ... 286s Selecting previously unselected package r-cran-broom. 286s Preparing to unpack .../320-r-cran-broom_1.0.5+dfsg-1_all.deb ... 286s Unpacking r-cran-broom (1.0.5+dfsg-1) ... 286s Selecting previously unselected package r-cran-forcats. 286s Preparing to unpack .../321-r-cran-forcats_1.0.0-1_all.deb ... 286s Unpacking r-cran-forcats (1.0.0-1) ... 286s Selecting previously unselected package r-cran-clipr. 286s Preparing to unpack .../322-r-cran-clipr_0.8.0-1_all.deb ... 286s Unpacking r-cran-clipr (0.8.0-1) ... 286s Selecting previously unselected package r-cran-tzdb. 286s Preparing to unpack .../323-r-cran-tzdb_0.4.0-2_s390x.deb ... 286s Unpacking r-cran-tzdb (0.4.0-2) ... 286s Selecting previously unselected package r-cran-vroom. 286s Preparing to unpack .../324-r-cran-vroom_1.6.5-1_s390x.deb ... 286s Unpacking r-cran-vroom (1.6.5-1) ... 286s Selecting previously unselected package r-cran-readr. 286s Preparing to unpack .../325-r-cran-readr_2.1.5-1_s390x.deb ... 286s Unpacking r-cran-readr (2.1.5-1) ... 286s Selecting previously unselected package r-cran-haven. 286s Preparing to unpack .../326-r-cran-haven_2.5.4-1_s390x.deb ... 286s Unpacking r-cran-haven (2.5.4-1) ... 286s Selecting previously unselected package r-cran-labelled. 286s Preparing to unpack .../327-r-cran-labelled_2.12.0-2_all.deb ... 286s Unpacking r-cran-labelled (2.12.0-2) ... 286s Selecting previously unselected package r-cran-broom.helpers. 286s Preparing to unpack .../328-r-cran-broom.helpers_1.14.0-2_all.deb ... 286s Unpacking r-cran-broom.helpers (1.14.0-2) ... 286s Selecting previously unselected package r-cran-patchwork. 286s Preparing to unpack .../329-r-cran-patchwork_1.2.0-1_all.deb ... 286s Unpacking r-cran-patchwork (1.2.0-1) ... 286s Selecting previously unselected package r-cran-ggstats. 286s Preparing to unpack .../330-r-cran-ggstats_0.5.1-2_all.deb ... 286s Unpacking r-cran-ggstats (0.5.1-2) ... 286s Selecting previously unselected package r-cran-ggally. 286s Preparing to unpack .../331-r-cran-ggally_2.2.1-1_all.deb ... 286s Unpacking r-cran-ggally (2.2.1-1) ... 286s Selecting previously unselected package r-bioc-ggbio. 286s Preparing to unpack .../332-r-bioc-ggbio_1.50.0-1_all.deb ... 286s Unpacking r-bioc-ggbio (1.50.0-1) ... 287s Selecting previously unselected package r-cran-brio. 287s Preparing to unpack .../333-r-cran-brio_1.1.4-1_s390x.deb ... 287s Unpacking r-cran-brio (1.1.4-1) ... 287s Selecting previously unselected package r-cran-ps. 287s Preparing to unpack .../334-r-cran-ps_1.7.6-1_s390x.deb ... 287s Unpacking r-cran-ps (1.7.6-1) ... 287s Selecting previously unselected package r-cran-processx. 287s Preparing to unpack .../335-r-cran-processx_3.8.3-1_s390x.deb ... 287s Unpacking r-cran-processx (3.8.3-1) ... 287s Selecting previously unselected package r-cran-callr. 287s Preparing to unpack .../336-r-cran-callr_3.7.3-2_all.deb ... 287s Unpacking r-cran-callr (3.7.3-2) ... 287s Selecting previously unselected package r-cran-desc. 287s 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291s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 291s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 291s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 291s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 292s Setting up r-cran-magrittr (2.0.3-1) ... 292s Setting up r-cran-rappdirs (0.3.3-1) ... 292s Setting up r-cran-filelock (1.0.3-1) ... 292s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 292s Setting up r-cran-littler (0.3.19-1) ... 292s Setting up r-cran-bh (1.84.0-1) ... 292s Setting up r-cran-fs (1.6.3+dfsg-1) ... 292s Setting up r-cran-rcpp (1.0.12-1) ... 292s Setting up r-cran-curl (5.2.0+dfsg-1) ... 292s Setting up r-cran-codetools (0.2-19-1) ... 292s Setting up r-cran-brio (1.1.4-1) ... 292s Setting up r-cran-diffobj (0.3.5-1) ... 292s Setting up r-bioc-biocgenerics (0.48.1-2) ... 292s Setting up 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This may take some time... done. 293s Running mktexlsr /var/lib/texmf ... done. 293s Building format(s) --all. 337s This may take some time... done. 346s (Reading database ... 108090 files and directories currently installed.) 346s Removing autopkgtest-satdep (0) ... 346s autopkgtest [18:38:03]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 346s autopkgtest [18:38:03]: test pkg-r-autopkgtest: [----------------------- 347s Test: Try to load the R library ggbio 347s 347s R version 4.3.2 (2023-10-31) -- "Eye Holes" 347s Copyright (C) 2023 The R Foundation for Statistical Computing 347s Platform: s390x-ibm-linux-gnu (64-bit) 347s 347s R is free software and comes with ABSOLUTELY NO WARRANTY. 347s You are welcome to redistribute it under certain conditions. 347s Type 'license()' or 'licence()' for distribution details. 347s 347s R is a collaborative project with many contributors. 347s Type 'contributors()' for more information and 347s 'citation()' on how to cite R or R packages in publications. 347s 347s Type 'demo()' for some demos, 'help()' for on-line help, or 347s 'help.start()' for an HTML browser interface to help. 347s Type 'q()' to quit R. 347s 347s > library('ggbio') 347s Loading required package: BiocGenerics 347s 347s Attaching package: ‘BiocGenerics’ 347s 347s The following objects are masked from ‘package:stats’: 347s 347s IQR, mad, sd, var, xtabs 347s 347s The following objects are masked from ‘package:base’: 347s 347s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 347s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 347s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 347s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 347s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 347s table, tapply, union, unique, unsplit, which.max, which.min 347s 347s Loading required package: ggplot2 348s Registered S3 method overwritten by 'GGally': 348s method from 348s +.gg ggplot2 361s Need specific help about ggbio? try mailing 361s the maintainer or visit https://lawremi.github.io/ggbio/ 361s 361s Attaching package: 'ggbio' 361s 361s > 361s > 361s The following objects are masked from 'package:ggplot2': 361s 361s geom_bar, geom_rect, geom_segment, ggsave, stat_bin, stat_identity, 361s xlim 361s 361s Other tests are currently unsupported! 361s They will be progressively added. 361s autopkgtest [18:38:18]: test pkg-r-autopkgtest: -----------------------] 362s autopkgtest [18:38:19]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 362s pkg-r-autopkgtest PASS 362s autopkgtest [18:38:19]: @@@@@@@@@@@@@@@@@@@@ summary 362s pkg-r-autopkgtest PASS 380s Creating nova instance adt-noble-s390x-r-bioc-ggbio-20240316-183216-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...