0s autopkgtest [19:07:11]: starting date and time: 2024-03-16 19:07:11+0000 0s autopkgtest [19:07:11]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:07:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0jcw42nw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-genomicfeatures --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-16.secgroup --name adt-noble-s390x-r-bioc-genomicfeatures-20240316-190711-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 171s autopkgtest [19:10:02]: testbed dpkg architecture: s390x 171s autopkgtest [19:10:02]: testbed apt version: 2.7.12 171s autopkgtest [19:10:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 172s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 173s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 173s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 174s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 174s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 174s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 174s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 174s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 174s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 174s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 175s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 175s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 175s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 176s Fetched 8760 kB in 3s (2504 kB/s) 176s Reading package lists... 179s Reading package lists... 179s Building dependency tree... 179s Reading state information... 179s Calculating upgrade... 179s The following packages will be REMOVED: 179s libssl3 179s The following NEW packages will be installed: 179s libssl3t64 179s The following packages have been kept back: 179s curl 179s The following packages will be upgraded: 179s openssl ubuntu-minimal ubuntu-standard 180s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 180s Need to get 2680 kB of archives. 180s After this operation, 23.6 kB of additional disk space will be used. 180s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 180s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 181s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 181s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 181s Fetched 2680 kB in 2s (1579 kB/s) 181s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 181s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 181s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 182s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 182s wget depends on libssl3 (>= 3.0.0). 182s tnftp depends on libssl3 (>= 3.0.0). 182s tcpdump depends on libssl3 (>= 3.0.0). 182s systemd-resolved depends on libssl3 (>= 3.0.0). 182s systemd depends on libssl3 (>= 3.0.0). 182s sudo depends on libssl3 (>= 3.0.0). 182s s390-tools depends on libssl3 (>= 3.0.0). 182s rsync depends on libssl3 (>= 3.0.0). 182s python3-cryptography depends on libssl3 (>= 3.0.0). 182s openssh-server depends on libssl3 (>= 3.0.10). 182s openssh-client depends on libssl3 (>= 3.0.10). 182s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 182s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 182s libssh-4:s390x depends on libssl3 (>= 3.0.0). 182s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 182s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 182s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 182s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 182s libnvme1 depends on libssl3 (>= 3.0.0). 182s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 182s libkmod2:s390x depends on libssl3 (>= 3.0.0). 182s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 182s libcurl4:s390x depends on libssl3 (>= 3.0.0). 182s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 182s kmod depends on libssl3 (>= 3.0.0). 182s dhcpcd-base depends on libssl3 (>= 3.0.0). 182s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 182s 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 182s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 182s Selecting previously unselected package libssl3t64:s390x. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 182s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 182s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 182s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 182s Unpacking ubuntu-minimal (1.536) over (1.535) ... 182s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 182s Unpacking ubuntu-standard (1.536) over (1.535) ... 182s Setting up ubuntu-minimal (1.536) ... 182s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 182s Setting up ubuntu-standard (1.536) ... 182s Setting up openssl (3.0.13-0ubuntu1) ... 182s Processing triggers for man-db (2.12.0-3) ... 182s Processing triggers for libc-bin (2.39-0ubuntu2) ... 182s Reading package lists... 183s Building dependency tree... 183s Reading state information... 183s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 183s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 183s Get:2 http://ftpmaster.internal/ubuntu noble InRelease [255 kB] 184s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 184s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 184s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3657 kB] 185s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 185s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3758 kB] 186s Get:8 http://ftpmaster.internal/ubuntu noble/universe Sources [19.8 MB] 188s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x Packages [14.4 MB] 193s Fetched 42.5 MB in 10s (4100 kB/s) 194s Reading package lists... 194s Reading package lists... 195s Building dependency tree... 195s Reading state information... 195s Calculating upgrade... 195s The following packages have been kept back: 195s curl 195s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 195s Reading package lists... 195s Building dependency tree... 195s Reading state information... 195s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 198s autopkgtest [19:10:29]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 198s autopkgtest [19:10:29]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-genomicfeatures 200s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (dsc) [2513 B] 200s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (tar) [572 kB] 200s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomicfeatures 1.54.1+dfsg-1 (diff) [13.0 kB] 200s gpgv: Signature made Fri Dec 1 02:52:50 2023 UTC 200s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 200s gpgv: issuer "plessy@debian.org" 200s gpgv: Can't check signature: No public key 200s dpkg-source: warning: cannot verify inline signature for ./r-bioc-genomicfeatures_1.54.1+dfsg-1.dsc: no acceptable signature found 200s autopkgtest [19:10:31]: testing package r-bioc-genomicfeatures version 1.54.1+dfsg-1 201s autopkgtest [19:10:32]: build not needed 202s autopkgtest [19:10:33]: test pkg-r-autopkgtest: preparing testbed 204s Reading package lists... 205s Building dependency tree... 205s Reading state information... 205s Starting pkgProblemResolver with broken count: 0 205s Starting 2 pkgProblemResolver with broken count: 0 205s Done 205s The following additional packages will be installed: 205s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 205s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 205s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 205s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 205s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 205s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 205s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 205s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 205s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 205s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 205s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 205s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 205s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 205s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 205s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 205s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 205s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 205s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 205s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 205s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 205s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 205s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 205s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 205s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 205s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 205s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 205s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 205s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 205s r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 205s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 205s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 205s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 205s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 205s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 205s r-bioc-org.hs.eg.db r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 205s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 205s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 205s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 205s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 205s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 205s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 205s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 205s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 205s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 205s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 205s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 205s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 205s r-cran-magrittr r-cran-markdown r-cran-matrix r-cran-matrixstats 205s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 205s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 205s r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp 205s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 205s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 205s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble 205s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 205s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 205s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 205s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 205s zlib1g-dev 205s Suggested packages: 205s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 205s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 205s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 205s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 205s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 205s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 205s libboost-context1.83-dev libboost-contract1.83-dev 205s libboost-coroutine1.83-dev libboost-date-time1.83-dev 205s libboost-exception1.83-dev libboost-fiber1.83-dev 205s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 205s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 205s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 205s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 205s libboost-numpy1.83-dev libboost-program-options1.83-dev 205s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 205s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 205s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 205s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 205s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 205s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 205s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 205s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 205s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 205s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 205s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 205s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 205s r-bioc-go.db r-bioc-graph r-cran-testthat r-bioc-all r-bioc-affy 205s r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 205s r-bioc-variantannotation r-bioc-shortread r-cran-batchtools 205s r-cran-data.table r-cran-mockery r-cran-webmockr r-bioc-hdf5array 205s r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats r-bioc-ggbio 205s r-bioc-gviz r-bioc-annotationhub r-cran-r.utils r-bioc-edger r-bioc-dexseq 205s r-bioc-sparsematrixstats r-bioc-limma r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff 205s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-getopt 205s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 205s r-cran-scales r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline 205s r-cran-rmpi r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio 205s r-cran-callr r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm 205s r-cran-zoo debhelper ghostscript gv | postscript-viewer perl-tk xpdf 205s | pdf-viewer xzdec hintview texlive-latex-base-doc wp2latex 205s Recommended packages: 205s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 205s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 205s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 205s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 205s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 205s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 205s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 205s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql 205s r-cran-unitizer r-cran-rsvg r-cran-survival r-cran-pkgload r-cran-waldo 205s r-cran-cairo r-cran-ragg r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf 205s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 205s r-cran-svglite node-highlight.js r-cran-lintr r-cran-tidyverse 205s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis 205s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 205s r-cran-data.table r-cran-mockr r-cran-formattable r-cran-pkgdown 205s r-cran-zeallot r-cran-renv lmodern dvisvgm libfile-mimeinfo-perl 205s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 205s The following packages will be REMOVED: 205s libcurl4 libpsl5 205s The following NEW packages will be installed: 205s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 205s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 205s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 205s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 205s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 205s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 205s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 205s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 205s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 205s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 205s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 205s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 205s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 205s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 205s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 205s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 205s libjs-popper.js libjs-prettify libjs-sifter.js 205s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 205s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 205s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 205s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 205s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 205s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 205s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 205s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 205s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 205s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 205s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 205s r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase 205s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 205s r-bioc-biocstyle r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome 205s r-bioc-delayedarray r-bioc-ensembldb r-bioc-genomeinfodb 205s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 205s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 205s r-bioc-org.hs.eg.db r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools 205s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 205s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 205s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 205s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 205s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 205s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 205s r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap 205s r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 205s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 205s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 205s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 205s r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler 205s r-cran-magrittr r-cran-markdown r-cran-matrix r-cran-matrixstats 205s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 205s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 205s r-cran-promises r-cran-purrr r-cran-r6 r-cran-rappdirs r-cran-rcpp 205s r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown 205s r-cran-rsqlite r-cran-runit r-cran-sass r-cran-shiny r-cran-snow 205s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble 205s r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs 205s r-cran-withr r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml 205s rpcsvc-proto t1utils tex-common texlive-base texlive-bibtex-extra 205s texlive-binaries texlive-latex-base unzip x11-common xdg-utils zip 205s zlib1g-dev 205s The following packages will be upgraded: 205s curl 205s 1 upgraded, 281 newly installed, 2 to remove and 0 not upgraded. 205s Need to get 499 MB/499 MB of archives. 205s After this operation, 1785 MB of additional disk space will be used. 205s Get:1 /tmp/autopkgtest.XXaIR9/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [828 B] 205s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 206s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 206s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 206s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 206s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 206s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 206s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 206s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 206s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 206s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 206s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 207s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 207s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 208s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 208s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 208s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 208s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 208s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 208s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 208s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 208s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 208s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 208s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 208s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 210s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 210s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 210s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 210s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 210s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 211s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 211s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 211s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 211s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 211s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 211s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 211s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 211s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 211s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 211s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 211s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 211s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 212s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 212s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 212s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 212s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 212s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 212s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 213s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 213s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 213s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 213s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 213s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 214s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 214s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 214s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 214s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 214s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 214s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 215s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 215s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 215s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 215s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 215s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 215s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 215s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 215s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 215s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 215s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 215s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 215s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 215s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 215s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 218s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 218s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 218s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 218s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 218s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 218s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 218s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 218s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 218s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 218s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 218s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 218s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 218s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 218s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 218s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 218s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 218s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 218s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 218s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 218s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 218s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 218s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 218s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 218s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 218s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 219s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 219s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 219s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 219s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 219s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 219s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 219s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 219s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 219s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 219s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 219s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 220s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 220s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 220s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 220s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 220s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 220s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 220s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 220s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 220s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 221s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 221s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 221s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 221s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 221s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 221s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 221s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 221s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 221s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 221s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 221s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 221s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 221s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 221s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 221s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 221s Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 221s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 221s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 221s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 221s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 224s Get:139 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 224s Get:140 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 224s Get:141 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 224s Get:142 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 224s Get:143 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 224s Get:144 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 224s Get:145 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 226s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 226s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 226s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 226s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 226s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 226s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 226s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 226s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 226s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 226s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 226s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 226s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 226s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 226s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 226s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 227s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 227s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 227s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 227s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 227s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 227s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 227s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 227s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 227s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 227s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 227s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 227s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 227s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 227s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 227s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 227s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 227s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 227s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 227s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 227s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 227s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1build1 [794 kB] 227s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 228s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 228s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 228s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 229s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 229s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 229s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 229s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 229s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationfilter all 1.26.0+dfsg-1 [239 kB] 229s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 229s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 229s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 229s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 229s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 229s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 229s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 229s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 229s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 229s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 229s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 229s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 229s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 229s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 230s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 230s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 230s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 230s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 230s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 230s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 230s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 230s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 230s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 230s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 230s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 230s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 230s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 230s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 230s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 230s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 230s Get:221 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 230s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 230s Get:223 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 230s Get:224 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 230s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 230s Get:226 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 230s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 230s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 230s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 231s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 231s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 231s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 231s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 231s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 231s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 231s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 231s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 231s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 231s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 231s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 231s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 231s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 231s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 231s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 231s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 231s Get:246 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 231s Get:247 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 231s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 231s Get:249 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 231s Get:250 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 232s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 234s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 234s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 237s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 237s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 237s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 237s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 237s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 237s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 237s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 237s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-1 [1410 kB] 237s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 238s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 238s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 238s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 238s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 238s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 238s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 238s Get:269 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 238s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 238s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 238s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 238s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 238s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 238s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 239s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-bsgenome all 1.70.2-1 [6975 kB] 239s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 239s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-protgenerics all 1.34.0-1 [225 kB] 239s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-ensembldb all 2.26.0+dfsg-1 [1489 kB] 239s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-org.hs.eg.db all 3.18.0-1 [64.1 MB] 244s Get:281 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-markdown all 1.12+dfsg-1 [179 kB] 244s Get:282 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-runit all 0.4.32-3 [283 kB] 245s Preconfiguring packages ... 245s Fetched 499 MB in 39s (12.8 MB/s) 245s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 245s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 245s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 245s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 245s wget depends on libpsl5 (>= 0.16.0). 245s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 245s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 245s 245s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 245s Removing libpsl5:s390x (0.21.2-1build1) ... 245s Selecting previously unselected package libpsl5t64:s390x. 245s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 245s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 245s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 245s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 245s s390-tools depends on libcurl4 (>= 7.16.2). 245s 245s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 245s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 245s Selecting previously unselected package libcurl4t64:s390x. 245s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 245s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 245s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 245s Selecting previously unselected package libc-dev-bin. 245s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 245s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 245s Selecting previously unselected package linux-libc-dev:s390x. 245s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 245s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 246s Selecting previously unselected package libcrypt-dev:s390x. 246s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 246s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 246s Selecting previously unselected package libtirpc-dev:s390x. 246s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 246s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 246s Selecting previously unselected package libnsl-dev:s390x. 246s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 246s Unpacking libnsl-dev:s390x (1.3.0-3) ... 246s Selecting previously unselected package rpcsvc-proto. 246s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 246s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 246s Selecting previously unselected package libc6-dev:s390x. 246s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 246s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 246s Selecting previously unselected package libisl23:s390x. 246s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 246s Unpacking libisl23:s390x (0.26-3) ... 246s Selecting previously unselected package libmpc3:s390x. 246s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 246s Unpacking libmpc3:s390x (1.3.1-1) ... 246s Selecting previously unselected package cpp-13-s390x-linux-gnu. 246s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package cpp-13. 246s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package cpp-s390x-linux-gnu. 246s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 246s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package cpp. 246s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 246s Unpacking cpp (4:13.2.0-7ubuntu1) ... 246s Selecting previously unselected package libcc1-0:s390x. 246s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libgomp1:s390x. 246s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libitm1:s390x. 246s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libatomic1:s390x. 246s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libasan8:s390x. 246s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libubsan1:s390x. 246s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 246s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 246s Selecting previously unselected package libgcc-13-dev:s390x. 246s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 246s Selecting previously unselected package gcc-13-s390x-linux-gnu. 246s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 246s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package gcc-13. 247s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package gcc-s390x-linux-gnu. 247s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package gcc. 247s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking gcc (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package libstdc++-13-dev:s390x. 247s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package g++-13-s390x-linux-gnu. 247s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package g++-13. 247s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 247s Unpacking g++-13 (13.2.0-17ubuntu2) ... 247s Selecting previously unselected package g++-s390x-linux-gnu. 247s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package g++. 247s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 247s Unpacking g++ (4:13.2.0-7ubuntu1) ... 247s Selecting previously unselected package build-essential. 247s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 247s Unpacking build-essential (12.10ubuntu1) ... 247s Selecting previously unselected package dctrl-tools. 247s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 247s Unpacking dctrl-tools (2.24-3build2) ... 247s Selecting previously unselected package libfreetype6:s390x. 247s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 247s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 247s Selecting previously unselected package fonts-dejavu-mono. 247s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 247s Unpacking fonts-dejavu-mono (2.37-8) ... 247s Selecting previously unselected package fonts-dejavu-core. 247s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 247s Unpacking fonts-dejavu-core (2.37-8) ... 247s Selecting previously unselected package fontconfig-config. 247s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 247s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 247s Selecting previously unselected package libfontconfig1:s390x. 247s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 247s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 248s Selecting previously unselected package fontconfig. 248s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 248s Unpacking fontconfig (2.15.0-1ubuntu1) ... 248s Selecting previously unselected package fonts-font-awesome. 248s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 248s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 248s Selecting previously unselected package fonts-glyphicons-halflings. 248s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 248s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 248s Selecting previously unselected package fonts-lmodern. 248s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 248s Unpacking fonts-lmodern (2.005-1) ... 248s Selecting previously unselected package fonts-mathjax. 248s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 248s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 248s Selecting previously unselected package libgfortran5:s390x. 248s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 248s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 248s Selecting previously unselected package libgfortran-13-dev:s390x. 248s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 248s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 248s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 248s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 248s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 248s Selecting previously unselected package gfortran-13. 248s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 248s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 248s Selecting previously unselected package gfortran-s390x-linux-gnu. 248s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 248s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 248s Selecting previously unselected package gfortran. 248s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 248s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 248s Selecting previously unselected package icu-devtools. 248s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 248s Unpacking icu-devtools (74.2-1ubuntu1) ... 248s Selecting previously unselected package javascript-common. 248s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 248s Unpacking javascript-common (11+nmu1) ... 248s Selecting previously unselected package libio-string-perl. 248s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 248s Unpacking libio-string-perl (1.08-4) ... 248s Selecting previously unselected package liblatex-tounicode-perl. 248s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 248s Unpacking liblatex-tounicode-perl (0.54-2) ... 248s Selecting previously unselected package libbibtex-parser-perl. 248s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 248s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 248s Selecting previously unselected package libblas3:s390x. 248s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 248s Unpacking libblas3:s390x (3.12.0-3) ... 248s Selecting previously unselected package libblas-dev:s390x. 248s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 248s Unpacking libblas-dev:s390x (3.12.0-3) ... 248s Selecting previously unselected package libboost1.83-dev:s390x. 248s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 248s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 251s Selecting previously unselected package libboost-dev:s390x. 251s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 251s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 251s Selecting previously unselected package libbz2-dev:s390x. 251s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 251s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 251s Selecting previously unselected package libpixman-1-0:s390x. 251s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 251s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 251s Selecting previously unselected package libxcb-render0:s390x. 252s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 252s Unpacking libxcb-render0:s390x (1.15-1) ... 252s Selecting previously unselected package libxcb-shm0:s390x. 252s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 252s Unpacking libxcb-shm0:s390x (1.15-1) ... 252s Selecting previously unselected package libxrender1:s390x. 252s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 252s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 252s Selecting previously unselected package libcairo2:s390x. 252s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 252s Unpacking libcairo2:s390x (1.18.0-1) ... 252s Selecting previously unselected package libdatrie1:s390x. 252s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 252s Unpacking libdatrie1:s390x (0.2.13-3) ... 252s Selecting previously unselected package libdeflate0:s390x. 252s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 252s Unpacking libdeflate0:s390x (1.19-1) ... 252s Selecting previously unselected package libgraphite2-3:s390x. 252s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 252s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 252s Selecting previously unselected package libharfbuzz0b:s390x. 252s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 252s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 252s Selecting previously unselected package x11-common. 252s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 252s Unpacking x11-common (1:7.7+23ubuntu2) ... 252s Selecting previously unselected package libice6:s390x. 252s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 252s Unpacking libice6:s390x (2:1.0.10-1build2) ... 252s Selecting previously unselected package libicu-dev:s390x. 252s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 252s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 252s Selecting previously unselected package libjpeg-turbo8:s390x. 252s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 252s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 252s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 252s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 252s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 252s Selecting previously unselected package libjpeg8:s390x. 252s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 252s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 252s Selecting previously unselected package libjpeg8-dev:s390x. 252s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 252s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 252s Selecting previously unselected package libjpeg-dev:s390x. 252s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 252s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 252s Selecting previously unselected package libjs-bootstrap. 252s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 252s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 252s Selecting previously unselected package libjs-popper.js. 252s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 252s Unpacking libjs-popper.js (1.16.1+ds-6) ... 252s Selecting previously unselected package libjs-bootstrap4. 252s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 252s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 252s Selecting previously unselected package libjs-d3. 252s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 252s Unpacking libjs-d3 (3.5.17-4) ... 252s Selecting previously unselected package libjs-es5-shim. 252s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 252s Unpacking libjs-es5-shim (4.6.7-2) ... 252s Selecting previously unselected package libjs-highlight.js. 252s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 252s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 252s Selecting previously unselected package libjs-jquery. 252s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 252s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 252s Selecting previously unselected package libjs-jquery-datatables. 252s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 252s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 252s Selecting previously unselected package libjs-sifter.js. 252s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 252s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 252s Selecting previously unselected package libjs-microplugin.js. 252s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 252s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 252s Selecting previously unselected package libjs-jquery-selectize.js. 252s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 252s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 252s Selecting previously unselected package libjs-jquery-ui. 252s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 252s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 252s Selecting previously unselected package libjs-json. 252s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 252s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 252s Selecting previously unselected package libjs-lunr. 252s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 252s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 252s Selecting previously unselected package libjs-prettify. 252s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 252s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 252s Selecting previously unselected package libkpathsea6:s390x. 252s Preparing to unpack .../090-libkpathsea6_2023.20230311.66589-9_s390x.deb ... 252s Unpacking libkpathsea6:s390x (2023.20230311.66589-9) ... 252s Selecting previously unselected package liblapack3:s390x. 252s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 252s Unpacking liblapack3:s390x (3.12.0-3) ... 252s Selecting previously unselected package liblapack-dev:s390x. 252s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 252s Unpacking liblapack-dev:s390x (3.12.0-3) ... 252s Selecting previously unselected package liblua5.4-0:s390x. 252s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 252s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 252s Selecting previously unselected package libncurses-dev:s390x. 252s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 252s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 252s Selecting previously unselected package libthai-data. 252s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 252s Unpacking libthai-data (0.1.29-2) ... 252s Selecting previously unselected package libthai0:s390x. 252s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 252s Unpacking libthai0:s390x (0.1.29-2) ... 252s Selecting previously unselected package libpango-1.0-0:s390x. 252s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 252s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 252s Selecting previously unselected package libpangoft2-1.0-0:s390x. 252s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 252s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 252s Selecting previously unselected package libpangocairo-1.0-0:s390x. 252s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 252s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 252s Selecting previously unselected package libpaper1:s390x. 252s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 252s Unpacking libpaper1:s390x (1.1.29) ... 252s Selecting previously unselected package libpaper-utils. 252s Preparing to unpack .../101-libpaper-utils_1.1.29_s390x.deb ... 252s Unpacking libpaper-utils (1.1.29) ... 252s Selecting previously unselected package libpcre2-16-0:s390x. 252s Preparing to unpack .../102-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 252s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 252s Selecting previously unselected package libpcre2-32-0:s390x. 252s Preparing to unpack .../103-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 252s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 252s Selecting previously unselected package libpcre2-posix3:s390x. 252s Preparing to unpack .../104-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 252s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 252s Selecting previously unselected package libpcre2-dev:s390x. 252s Preparing to unpack .../105-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 252s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 252s Selecting previously unselected package libpkgconf3:s390x. 252s Preparing to unpack .../106-libpkgconf3_1.8.1-2_s390x.deb ... 252s Unpacking libpkgconf3:s390x (1.8.1-2) ... 252s Selecting previously unselected package zlib1g-dev:s390x. 252s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 252s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 252s Selecting previously unselected package libpng-dev:s390x. 252s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 252s Unpacking libpng-dev:s390x (1.6.43-1) ... 252s Selecting previously unselected package libpotrace0:s390x. 252s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 252s Unpacking libpotrace0:s390x (1.16-2) ... 252s Selecting previously unselected package libptexenc1:s390x. 252s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 252s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 252s Selecting previously unselected package libreadline-dev:s390x. 252s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 252s Unpacking libreadline-dev:s390x (8.2-3) ... 252s Selecting previously unselected package libsharpyuv0:s390x. 252s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 252s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 252s Selecting previously unselected package libsm6:s390x. 252s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 252s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 252s Selecting previously unselected package libsynctex2:s390x. 252s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 252s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 252s Selecting previously unselected package libtcl8.6:s390x. 252s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 252s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 252s Selecting previously unselected package libteckit0:s390x. 252s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 252s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 252s Selecting previously unselected package libtexlua53-5:s390x. 252s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 252s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 252s Selecting previously unselected package libjbig0:s390x. 252s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 252s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 252s Selecting previously unselected package libwebp7:s390x. 252s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 252s Unpacking libwebp7:s390x (1.3.2-0.4) ... 253s Selecting previously unselected package libtiff6:s390x. 253s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 253s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 253s Selecting previously unselected package libxft2:s390x. 253s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 253s Unpacking libxft2:s390x (2.3.6-1) ... 253s Selecting previously unselected package libxss1:s390x. 253s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 253s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 253s Selecting previously unselected package libtk8.6:s390x. 253s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 253s Unpacking libtk8.6:s390x (8.6.13-2) ... 253s Selecting previously unselected package libxt6:s390x. 253s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 253s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 253s Selecting previously unselected package libxmu6:s390x. 253s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 253s Unpacking libxmu6:s390x (2:1.1.3-3) ... 253s Selecting previously unselected package libxpm4:s390x. 253s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 253s Unpacking libxpm4:s390x (1:3.5.17-1) ... 253s Selecting previously unselected package libxaw7:s390x. 253s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 253s Unpacking libxaw7:s390x (2:1.0.14-1) ... 253s Selecting previously unselected package libxi6:s390x. 253s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 253s Unpacking libxi6:s390x (2:1.8.1-1) ... 253s Selecting previously unselected package libzzip-0-13:s390x. 253s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 253s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 253s Selecting previously unselected package node-bootstrap-sass. 253s Preparing to unpack .../130-node-bootstrap-sass_3.4.3-2_all.deb ... 253s Unpacking node-bootstrap-sass (3.4.3-2) ... 253s Selecting previously unselected package node-html5shiv. 253s Preparing to unpack .../131-node-html5shiv_3.7.3+dfsg-5_all.deb ... 253s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 253s Selecting previously unselected package node-normalize.css. 253s Preparing to unpack .../132-node-normalize.css_8.0.1-5_all.deb ... 253s Unpacking node-normalize.css (8.0.1-5) ... 253s Selecting previously unselected package pandoc-data. 253s Preparing to unpack .../133-pandoc-data_3.1.3-1_all.deb ... 253s Unpacking pandoc-data (3.1.3-1) ... 253s Selecting previously unselected package pandoc. 253s Preparing to unpack .../134-pandoc_3.1.3+ds-2_s390x.deb ... 253s Unpacking pandoc (3.1.3+ds-2) ... 254s Selecting previously unselected package pkgconf-bin. 254s Preparing to unpack .../135-pkgconf-bin_1.8.1-2_s390x.deb ... 254s Unpacking pkgconf-bin (1.8.1-2) ... 254s Selecting previously unselected package pkgconf:s390x. 254s Preparing to unpack .../136-pkgconf_1.8.1-2_s390x.deb ... 255s Unpacking pkgconf:s390x (1.8.1-2) ... 255s Selecting previously unselected package pkg-config:s390x. 255s Preparing to unpack .../137-pkg-config_1.8.1-2_s390x.deb ... 255s Unpacking pkg-config:s390x (1.8.1-2) ... 255s Selecting previously unselected package zip. 255s Preparing to unpack .../138-zip_3.0-13_s390x.deb ... 255s Unpacking zip (3.0-13) ... 255s Selecting previously unselected package unzip. 255s Preparing to unpack .../139-unzip_6.0-28ubuntu3_s390x.deb ... 255s Unpacking unzip (6.0-28ubuntu3) ... 255s Selecting previously unselected package xdg-utils. 255s Preparing to unpack .../140-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 255s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 255s Selecting previously unselected package r-base-core. 255s Preparing to unpack .../141-r-base-core_4.3.2-1build1_s390x.deb ... 255s Unpacking r-base-core (4.3.2-1build1) ... 255s Selecting previously unselected package liblzma-dev:s390x. 255s Preparing to unpack .../142-liblzma-dev_5.4.5-0.3_s390x.deb ... 255s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 255s Selecting previously unselected package r-base-dev. 255s Preparing to unpack .../143-r-base-dev_4.3.2-1build1_all.deb ... 255s Unpacking r-base-dev (4.3.2-1build1) ... 255s Selecting previously unselected package pkg-r-autopkgtest. 255s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 255s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 255s Selecting previously unselected package r-bioc-biocgenerics. 255s Preparing to unpack .../145-r-bioc-biocgenerics_0.48.1-2_all.deb ... 255s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 255s Selecting previously unselected package r-bioc-biobase. 255s Preparing to unpack .../146-r-bioc-biobase_2.62.0-1_s390x.deb ... 255s Unpacking r-bioc-biobase (2.62.0-1) ... 255s Selecting previously unselected package r-bioc-s4vectors. 255s Preparing to unpack .../147-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 255s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 255s Selecting previously unselected package r-bioc-iranges. 255s Preparing to unpack .../148-r-bioc-iranges_2.36.0-1_s390x.deb ... 255s Unpacking r-bioc-iranges (2.36.0-1) ... 255s Selecting previously unselected package r-cran-dbi. 255s Preparing to unpack .../149-r-cran-dbi_1.2.2-1_all.deb ... 255s Unpacking r-cran-dbi (1.2.2-1) ... 255s Selecting previously unselected package r-cran-bit. 255s Preparing to unpack .../150-r-cran-bit_4.0.5-1_s390x.deb ... 255s Unpacking r-cran-bit (4.0.5-1) ... 255s Selecting previously unselected package r-cran-bit64. 255s Preparing to unpack .../151-r-cran-bit64_4.0.5-1_s390x.deb ... 255s Unpacking r-cran-bit64 (4.0.5-1) ... 255s Selecting previously unselected package r-cran-rlang. 255s Preparing to unpack .../152-r-cran-rlang_1.1.3-1_s390x.deb ... 255s Unpacking r-cran-rlang (1.1.3-1) ... 255s Selecting previously unselected package r-cran-cli. 255s Preparing to unpack .../153-r-cran-cli_3.6.2-1_s390x.deb ... 255s Unpacking r-cran-cli (3.6.2-1) ... 255s Selecting previously unselected package r-cran-glue. 255s Preparing to unpack .../154-r-cran-glue_1.7.0-1_s390x.deb ... 255s Unpacking r-cran-glue (1.7.0-1) ... 255s Selecting previously unselected package r-cran-lifecycle. 255s Preparing to unpack .../155-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 255s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 255s Selecting previously unselected package r-cran-vctrs. 255s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_s390x.deb ... 255s Unpacking r-cran-vctrs (0.6.5-1) ... 255s Selecting previously unselected package r-cran-blob. 255s Preparing to unpack .../157-r-cran-blob_1.2.4-1_all.deb ... 255s Unpacking r-cran-blob (1.2.4-1) ... 255s Selecting previously unselected package r-cran-fastmap. 255s Preparing to unpack .../158-r-cran-fastmap_1.1.1-1_s390x.deb ... 255s Unpacking r-cran-fastmap (1.1.1-1) ... 255s Selecting previously unselected package r-cran-cachem. 256s Preparing to unpack .../159-r-cran-cachem_1.0.8-1_s390x.deb ... 256s Unpacking r-cran-cachem (1.0.8-1) ... 256s Selecting previously unselected package r-cran-memoise. 256s Preparing to unpack .../160-r-cran-memoise_2.0.1-1_all.deb ... 256s Unpacking r-cran-memoise (2.0.1-1) ... 256s Selecting previously unselected package r-cran-pkgconfig. 256s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 256s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 256s Selecting previously unselected package r-cran-plogr. 256s Preparing to unpack .../162-r-cran-plogr_0.2.0-3build1_all.deb ... 256s Unpacking r-cran-plogr (0.2.0-3build1) ... 256s Selecting previously unselected package r-cran-cpp11. 256s Preparing to unpack .../163-r-cran-cpp11_0.4.7-1_all.deb ... 256s Unpacking r-cran-cpp11 (0.4.7-1) ... 256s Selecting previously unselected package r-cran-rsqlite. 256s Preparing to unpack .../164-r-cran-rsqlite_2.3.4-1_s390x.deb ... 256s Unpacking r-cran-rsqlite (2.3.4-1) ... 256s Selecting previously unselected package r-cran-curl. 256s Preparing to unpack .../165-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 256s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 256s Selecting previously unselected package r-cran-jsonlite. 256s Preparing to unpack .../166-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 256s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 256s Selecting previously unselected package r-cran-mime. 256s Preparing to unpack .../167-r-cran-mime_0.12-1_s390x.deb ... 256s Unpacking r-cran-mime (0.12-1) ... 256s Selecting previously unselected package r-cran-sys. 256s Preparing to unpack .../168-r-cran-sys_3.4.2-1_s390x.deb ... 256s Unpacking r-cran-sys (3.4.2-1) ... 256s Selecting previously unselected package r-cran-askpass. 256s Preparing to unpack .../169-r-cran-askpass_1.2.0-1_s390x.deb ... 256s Unpacking r-cran-askpass (1.2.0-1) ... 256s Selecting previously unselected package r-cran-openssl. 256s Preparing to unpack .../170-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 256s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 256s Selecting previously unselected package r-cran-r6. 256s Preparing to unpack .../171-r-cran-r6_2.5.1-1_all.deb ... 256s Unpacking r-cran-r6 (2.5.1-1) ... 256s Selecting previously unselected package r-cran-httr. 256s Preparing to unpack .../172-r-cran-httr_1.4.7+dfsg-1_all.deb ... 256s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 256s Selecting previously unselected package r-cran-png. 256s Preparing to unpack .../173-r-cran-png_0.1-8-1_s390x.deb ... 256s Unpacking r-cran-png (0.1-8-1) ... 256s Selecting previously unselected package r-bioc-zlibbioc. 256s Preparing to unpack .../174-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 256s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 256s Selecting previously unselected package r-bioc-xvector. 256s Preparing to unpack .../175-r-bioc-xvector_0.42.0-1_s390x.deb ... 256s Unpacking r-bioc-xvector (0.42.0-1) ... 256s Selecting previously unselected package r-cran-bitops. 256s Preparing to unpack .../176-r-cran-bitops_1.0-7-1_s390x.deb ... 256s Unpacking r-cran-bitops (1.0-7-1) ... 256s Selecting previously unselected package r-cran-rcurl. 256s Preparing to unpack .../177-r-cran-rcurl_1.98-1.14+dfsg-1build1_s390x.deb ... 256s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 256s Selecting previously unselected package r-bioc-genomeinfodbdata. 256s Preparing to unpack .../178-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 256s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 256s Selecting previously unselected package r-bioc-genomeinfodb. 256s Preparing to unpack .../179-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 256s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 256s Selecting previously unselected package r-cran-crayon. 256s Preparing to unpack .../180-r-cran-crayon_1.5.2-1_all.deb ... 256s Unpacking r-cran-crayon (1.5.2-1) ... 256s Selecting previously unselected package r-bioc-biostrings. 256s Preparing to unpack .../181-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 256s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 256s Selecting previously unselected package r-bioc-keggrest. 256s Preparing to unpack .../182-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 256s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 256s Selecting previously unselected package r-bioc-annotationdbi. 256s Preparing to unpack .../183-r-bioc-annotationdbi_1.64.1-1_all.deb ... 256s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 256s Selecting previously unselected package r-bioc-genomicranges. 256s Preparing to unpack .../184-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 256s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 256s Selecting previously unselected package r-cran-lazyeval. 256s Preparing to unpack .../185-r-cran-lazyeval_0.2.2-1build1_s390x.deb ... 256s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 256s Selecting previously unselected package r-bioc-annotationfilter. 256s Preparing to unpack .../186-r-bioc-annotationfilter_1.26.0+dfsg-1_all.deb ... 256s Unpacking r-bioc-annotationfilter (1.26.0+dfsg-1) ... 256s Selecting previously unselected package r-cran-generics. 256s Preparing to unpack .../187-r-cran-generics_0.1.3-1_all.deb ... 256s Unpacking r-cran-generics (0.1.3-1) ... 256s Selecting previously unselected package r-cran-magrittr. 256s Preparing to unpack .../188-r-cran-magrittr_2.0.3-1_s390x.deb ... 256s Unpacking r-cran-magrittr (2.0.3-1) ... 256s Selecting previously unselected package r-cran-fansi. 256s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_s390x.deb ... 256s Unpacking r-cran-fansi (1.0.5-1) ... 256s Selecting previously unselected package r-cran-utf8. 256s Preparing to unpack .../190-r-cran-utf8_1.2.4-1_s390x.deb ... 256s Unpacking r-cran-utf8 (1.2.4-1) ... 256s Selecting previously unselected package r-cran-pillar. 256s Preparing to unpack .../191-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 256s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 257s Selecting previously unselected package r-cran-tibble. 257s Preparing to unpack .../192-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 257s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 257s Selecting previously unselected package r-cran-withr. 257s Preparing to unpack .../193-r-cran-withr_2.5.0-1_all.deb ... 257s Unpacking r-cran-withr (2.5.0-1) ... 257s Selecting previously unselected package r-cran-tidyselect. 257s Preparing to unpack .../194-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 257s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 257s Selecting previously unselected package r-cran-dplyr. 257s Preparing to unpack .../195-r-cran-dplyr_1.1.4-1_s390x.deb ... 257s Unpacking r-cran-dplyr (1.1.4-1) ... 257s Selecting previously unselected package r-cran-purrr. 257s Preparing to unpack .../196-r-cran-purrr_1.0.2-1_s390x.deb ... 257s Unpacking r-cran-purrr (1.0.2-1) ... 257s Selecting previously unselected package r-cran-stringi. 257s Preparing to unpack .../197-r-cran-stringi_1.8.3-1_s390x.deb ... 257s Unpacking r-cran-stringi (1.8.3-1) ... 257s Selecting previously unselected package r-cran-stringr. 257s Preparing to unpack .../198-r-cran-stringr_1.5.1-1_all.deb ... 257s Unpacking r-cran-stringr (1.5.1-1) ... 257s Selecting previously unselected package r-cran-tidyr. 257s Preparing to unpack .../199-r-cran-tidyr_1.3.1-1_s390x.deb ... 257s Unpacking r-cran-tidyr (1.3.1-1) ... 257s Selecting previously unselected package r-cran-dbplyr. 257s Preparing to unpack .../200-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 257s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 257s Selecting previously unselected package r-cran-filelock. 257s Preparing to unpack .../201-r-cran-filelock_1.0.3-1_s390x.deb ... 257s Unpacking r-cran-filelock (1.0.3-1) ... 257s Selecting previously unselected package r-bioc-biocfilecache. 257s Preparing to unpack .../202-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 257s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 257s Selecting previously unselected package r-bioc-biocio. 257s Preparing to unpack .../203-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 257s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 257s Selecting previously unselected package r-cran-formatr. 257s Preparing to unpack .../204-r-cran-formatr_1.14-1_all.deb ... 257s Unpacking r-cran-formatr (1.14-1) ... 257s Selecting previously unselected package r-cran-lambda.r. 257s Preparing to unpack .../205-r-cran-lambda.r_1.2.4-2build1_all.deb ... 257s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 257s Selecting previously unselected package r-cran-futile.options. 257s Preparing to unpack .../206-r-cran-futile.options_1.0.1-3build1_all.deb ... 257s Unpacking r-cran-futile.options (1.0.1-3build1) ... 257s Selecting previously unselected package r-cran-futile.logger. 257s Preparing to unpack .../207-r-cran-futile.logger_1.4.3-4build1_all.deb ... 257s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 257s Selecting previously unselected package r-cran-snow. 257s Preparing to unpack .../208-r-cran-snow_1%3a0.4.4-2_all.deb ... 257s Unpacking r-cran-snow (1:0.4.4-2) ... 257s Selecting previously unselected package r-cran-codetools. 257s Preparing to unpack .../209-r-cran-codetools_0.2-19-1_all.deb ... 257s Unpacking r-cran-codetools (0.2-19-1) ... 257s Selecting previously unselected package r-cran-bh. 257s Preparing to unpack .../210-r-cran-bh_1.84.0-1_all.deb ... 257s Unpacking r-cran-bh (1.84.0-1) ... 257s Selecting previously unselected package r-bioc-biocparallel. 257s Preparing to unpack .../211-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 257s Unpacking r-bioc-biocparallel (1.36.0-1) ... 257s Selecting previously unselected package r-cran-base64enc. 257s Preparing to unpack .../212-r-cran-base64enc_0.1-3-3_s390x.deb ... 257s Unpacking r-cran-base64enc (0.1-3-3) ... 257s Selecting previously unselected package r-cran-digest. 257s Preparing to unpack .../213-r-cran-digest_0.6.34-1_s390x.deb ... 257s Unpacking r-cran-digest (0.6.34-1) ... 257s Selecting previously unselected package r-cran-ellipsis. 257s Preparing to unpack .../214-r-cran-ellipsis_0.3.2-2_s390x.deb ... 257s Unpacking r-cran-ellipsis (0.3.2-2) ... 257s Selecting previously unselected package r-cran-htmltools. 257s Preparing to unpack .../215-r-cran-htmltools_0.5.7-1_s390x.deb ... 257s Unpacking r-cran-htmltools (0.5.7-1) ... 257s Selecting previously unselected package r-cran-evaluate. 257s Preparing to unpack .../216-r-cran-evaluate_0.23-1_all.deb ... 257s Unpacking r-cran-evaluate (0.23-1) ... 257s Selecting previously unselected package r-cran-xfun. 257s Preparing to unpack .../217-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 257s Unpacking r-cran-xfun (0.41+dfsg-1) ... 257s Selecting previously unselected package r-cran-highr. 257s Preparing to unpack .../218-r-cran-highr_0.10+dfsg-1_all.deb ... 257s Unpacking r-cran-highr (0.10+dfsg-1) ... 257s Selecting previously unselected package r-cran-yaml. 257s Preparing to unpack .../219-r-cran-yaml_2.3.8-1_s390x.deb ... 257s Unpacking r-cran-yaml (2.3.8-1) ... 257s Selecting previously unselected package libjs-mathjax. 257s Preparing to unpack .../220-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 257s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 258s Selecting previously unselected package r-cran-knitr. 258s Preparing to unpack .../221-r-cran-knitr_1.45+dfsg-1_all.deb ... 258s Unpacking r-cran-knitr (1.45+dfsg-1) ... 258s Selecting previously unselected package r-cran-jquerylib. 258s Preparing to unpack .../222-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 258s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 258s Selecting previously unselected package r-cran-fs. 258s Preparing to unpack .../223-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 258s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 258s Selecting previously unselected package r-cran-rappdirs. 258s Preparing to unpack .../224-r-cran-rappdirs_0.3.3-1_s390x.deb ... 258s Unpacking r-cran-rappdirs (0.3.3-1) ... 258s Selecting previously unselected package r-cran-sass. 258s Preparing to unpack .../225-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 258s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 258s Selecting previously unselected package r-cran-bslib. 258s Preparing to unpack .../226-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 258s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 259s Selecting previously unselected package r-cran-fontawesome. 259s Preparing to unpack .../227-r-cran-fontawesome_0.5.2-1_all.deb ... 259s Unpacking r-cran-fontawesome (0.5.2-1) ... 259s Selecting previously unselected package r-cran-tinytex. 259s Preparing to unpack .../228-r-cran-tinytex_0.49-1_all.deb ... 259s Unpacking r-cran-tinytex (0.49-1) ... 259s Selecting previously unselected package libjs-modernizr. 259s Preparing to unpack .../229-libjs-modernizr_2.6.2+ds1-5_all.deb ... 259s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 259s Selecting previously unselected package r-cran-littler. 259s Preparing to unpack .../230-r-cran-littler_0.3.19-1_s390x.deb ... 259s Unpacking r-cran-littler (0.3.19-1) ... 259s Selecting previously unselected package r-cran-pkgkitten. 259s Preparing to unpack .../231-r-cran-pkgkitten_0.2.3-1_all.deb ... 259s Unpacking r-cran-pkgkitten (0.2.3-1) ... 259s Selecting previously unselected package r-cran-rcpp. 259s Preparing to unpack .../232-r-cran-rcpp_1.0.12-1_s390x.deb ... 259s Unpacking r-cran-rcpp (1.0.12-1) ... 259s Selecting previously unselected package r-cran-later. 259s Preparing to unpack .../233-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 259s Unpacking r-cran-later (1.3.2+dfsg-1) ... 259s Selecting previously unselected package r-cran-promises. 259s Preparing to unpack .../234-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 259s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 259s Selecting previously unselected package r-cran-httpuv. 259s Preparing to unpack .../235-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 259s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 259s Selecting previously unselected package r-cran-xtable. 259s Preparing to unpack .../236-r-cran-xtable_1%3a1.8-4-2_all.deb ... 259s Unpacking r-cran-xtable (1:1.8-4-2) ... 259s Selecting previously unselected package r-cran-sourcetools. 259s Preparing to unpack .../237-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 259s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 259s Selecting previously unselected package r-cran-commonmark. 259s Preparing to unpack .../238-r-cran-commonmark_1.9.1-1_s390x.deb ... 259s Unpacking r-cran-commonmark (1.9.1-1) ... 259s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 259s Preparing to unpack .../239-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 259s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 259s Selecting previously unselected package r-cran-shiny. 259s Preparing to unpack .../240-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 259s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 259s Selecting previously unselected package r-cran-rmarkdown. 259s Preparing to unpack .../241-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 259s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 259s Selecting previously unselected package r-cran-bookdown. 259s Preparing to unpack .../242-r-cran-bookdown_0.37+dfsg-1_all.deb ... 259s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 259s Selecting previously unselected package r-cran-biocmanager. 259s Preparing to unpack .../243-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 259s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 259s Selecting previously unselected package tex-common. 259s Preparing to unpack .../244-tex-common_6.18_all.deb ... 259s Unpacking tex-common (6.18) ... 259s Selecting previously unselected package t1utils. 259s Preparing to unpack .../245-t1utils_1.41-4build2_s390x.deb ... 259s Unpacking t1utils (1.41-4build2) ... 259s Selecting previously unselected package texlive-binaries. 259s Preparing to unpack .../246-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 259s Unpacking texlive-binaries (2023.20230311.66589-9) ... 260s Selecting previously unselected package texlive-base. 260s Preparing to unpack .../247-texlive-base_2023.20240207-1_all.deb ... 260s Unpacking texlive-base (2023.20240207-1) ... 262s Selecting previously unselected package texlive-latex-base. 262s Preparing to unpack .../248-texlive-latex-base_2023.20240207-1_all.deb ... 262s Unpacking texlive-latex-base (2023.20240207-1) ... 262s Selecting previously unselected package texlive-bibtex-extra. 262s Preparing to unpack .../249-texlive-bibtex-extra_2023.20240207-1_all.deb ... 262s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 270s Selecting previously unselected package r-bioc-biocstyle. 270s Preparing to unpack .../250-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 270s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 270s Selecting previously unselected package r-cran-xml. 270s Preparing to unpack .../251-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 270s Unpacking r-cran-xml (3.99-0.16.1-1) ... 270s Selecting previously unselected package r-cran-hms. 270s Preparing to unpack .../252-r-cran-hms_1.1.3-1_all.deb ... 270s Unpacking r-cran-hms (1.1.3-1) ... 270s Selecting previously unselected package r-cran-prettyunits. 270s Preparing to unpack .../253-r-cran-prettyunits_1.2.0-1_all.deb ... 270s Unpacking r-cran-prettyunits (1.2.0-1) ... 270s Selecting previously unselected package r-cran-progress. 270s Preparing to unpack .../254-r-cran-progress_1.2.3-1_all.deb ... 270s Unpacking r-cran-progress (1.2.3-1) ... 270s Selecting previously unselected package r-cran-xml2. 270s Preparing to unpack .../255-r-cran-xml2_1.3.6-1_s390x.deb ... 270s Unpacking r-cran-xml2 (1.3.6-1) ... 270s Selecting previously unselected package r-bioc-biomart. 270s Preparing to unpack .../256-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 270s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 270s Selecting previously unselected package r-bioc-rhtslib. 270s Preparing to unpack .../257-r-bioc-rhtslib_2.4.1+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 270s Selecting previously unselected package r-bioc-rsamtools. 270s Preparing to unpack .../258-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 270s Selecting previously unselected package r-cran-matrixstats. 270s Preparing to unpack .../259-r-cran-matrixstats_1.2.0-1_s390x.deb ... 270s Unpacking r-cran-matrixstats (1.2.0-1) ... 270s Selecting previously unselected package r-bioc-matrixgenerics. 270s Preparing to unpack .../260-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 270s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 270s Selecting previously unselected package r-cran-lattice. 270s Preparing to unpack .../261-r-cran-lattice_0.22-5-1_s390x.deb ... 270s Unpacking r-cran-lattice (0.22-5-1) ... 270s Selecting previously unselected package r-cran-matrix. 270s Preparing to unpack .../262-r-cran-matrix_1.6-5-1_s390x.deb ... 270s Unpacking r-cran-matrix (1.6-5-1) ... 270s Selecting previously unselected package r-cran-abind. 270s Preparing to unpack .../263-r-cran-abind_1.4-5-2_all.deb ... 270s Unpacking r-cran-abind (1.4-5-2) ... 270s Selecting previously unselected package r-bioc-s4arrays. 270s Preparing to unpack .../264-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 270s Selecting previously unselected package r-bioc-sparsearray. 270s Preparing to unpack .../265-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 270s Selecting previously unselected package r-bioc-delayedarray. 270s Preparing to unpack .../266-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 270s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 270s Selecting previously unselected package r-bioc-summarizedexperiment. 270s Preparing to unpack .../267-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 270s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 270s Selecting previously unselected package r-bioc-genomicalignments. 270s Preparing to unpack .../268-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 270s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 270s Selecting previously unselected package r-cran-rjson. 270s Preparing to unpack .../269-r-cran-rjson_0.2.21-1_s390x.deb ... 270s Unpacking r-cran-rjson (0.2.21-1) ... 270s Selecting previously unselected package r-cran-restfulr. 270s Preparing to unpack .../270-r-cran-restfulr_0.0.15-1_s390x.deb ... 270s Unpacking r-cran-restfulr (0.0.15-1) ... 270s Selecting previously unselected package r-bioc-rtracklayer. 270s Preparing to unpack .../271-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 270s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 270s Selecting previously unselected package r-bioc-bsgenome. 270s Preparing to unpack .../272-r-bioc-bsgenome_1.70.2-1_all.deb ... 270s Unpacking r-bioc-bsgenome (1.70.2-1) ... 271s Selecting previously unselected package r-bioc-genomicfeatures. 271s Preparing to unpack .../273-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 271s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 271s Selecting previously unselected package r-bioc-protgenerics. 271s Preparing to unpack .../274-r-bioc-protgenerics_1.34.0-1_all.deb ... 271s Unpacking r-bioc-protgenerics (1.34.0-1) ... 271s Selecting previously unselected package r-bioc-ensembldb. 271s Preparing to unpack .../275-r-bioc-ensembldb_2.26.0+dfsg-1_all.deb ... 271s Unpacking r-bioc-ensembldb (2.26.0+dfsg-1) ... 271s Selecting previously unselected package r-bioc-org.hs.eg.db. 271s Preparing to unpack .../276-r-bioc-org.hs.eg.db_3.18.0-1_all.deb ... 271s Unpacking r-bioc-org.hs.eg.db (3.18.0-1) ... 273s Selecting previously unselected package r-cran-markdown. 273s Preparing to unpack .../277-r-cran-markdown_1.12+dfsg-1_all.deb ... 273s Unpacking r-cran-markdown (1.12+dfsg-1) ... 273s Selecting previously unselected package r-cran-runit. 273s Preparing to unpack .../278-r-cran-runit_0.4.32-3_all.deb ... 273s Unpacking r-cran-runit (0.4.32-3) ... 273s Selecting previously unselected package autopkgtest-satdep. 273s Preparing to unpack .../279-1-autopkgtest-satdep.deb ... 273s Unpacking autopkgtest-satdep (0) ... 273s Setting up libjs-json (0~20221030+~1.0.8-1) ... 273s Setting up javascript-common (11+nmu1) ... 273s Setting up libgraphite2-3:s390x (1.3.14-2) ... 273s Setting up libpixman-1-0:s390x (0.42.2-1) ... 273s Setting up libsharpyuv0:s390x (1.3.2-0.4) ... 273s Setting up libpaper1:s390x (1.1.29) ... 273s 273s Creating config file /etc/papersize with new version 273s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 273s Setting up libxpm4:s390x (1:3.5.17-1) ... 273s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 273s Setting up libxi6:s390x (2:1.8.1-1) ... 273s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 273s Setting up libdatrie1:s390x (0.2.13-3) ... 273s Setting up libjs-popper.js (1.16.1+ds-6) ... 273s Setting up libxcb-render0:s390x (1.15-1) ... 273s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 273s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 273s Setting up libjs-lunr (2.3.9~dfsg-2) ... 273s Setting up unzip (6.0-28ubuntu3) ... 273s Setting up liblatex-tounicode-perl (0.54-2) ... 273s Setting up x11-common (1:7.7+23ubuntu2) ... 274s Setting up node-html5shiv (3.7.3+dfsg-5) ... 274s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 274s Setting up libdeflate0:s390x (1.19-1) ... 274s Setting up linux-libc-dev:s390x (6.8.0-11.11) ... 274s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 274s Setting up libxcb-shm0:s390x (1.15-1) ... 274s Setting up libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 274s Setting up libpaper-utils (1.1.29) ... 274s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ... 274s Setting up libjs-modernizr (2.6.2+ds1-5) ... 274s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 274s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ... 274s Setting up libjs-es5-shim (4.6.7-2) ... 274s Setting up tex-common (6.18) ... 274s update-language: texlive-base not installed and configured, doing nothing! 274s Setting up libio-string-perl (1.08-4) ... 274s Setting up zip (3.0-13) ... 274s Setting up libpcre2-32-0:s390x (10.42-4ubuntu1) ... 274s Setting up libblas3:s390x (3.12.0-3) ... 274s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 274s Setting up libtirpc-dev:s390x (1.3.4+ds-1build1) ... 274s Setting up libpkgconf3:s390x (1.8.1-2) ... 274s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 274s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ... 274s Setting up libteckit0:s390x (2.5.12+ds1-1) ... 274s Setting up t1utils (1.41-4build2) ... 274s Setting up libtexlua53-5:s390x (2023.20230311.66589-9) ... 274s Setting up libjs-d3 (3.5.17-4) ... 274s Setting up fonts-dejavu-mono (2.37-8) ... 274s Setting up libmpc3:s390x (1.3.1-1) ... 274s Setting up libatomic1:s390x (14-20240303-1ubuntu1) ... 274s Setting up libtcl8.6:s390x (8.6.13+dfsg-2) ... 274s Setting up icu-devtools (74.2-1ubuntu1) ... 274s Setting up fonts-dejavu-core (2.37-8) ... 274s Setting up pkgconf-bin (1.8.1-2) ... 274s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 274s Setting up libkpathsea6:s390x (2023.20230311.66589-9) ... 274s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 274s Setting up libwebp7:s390x (1.3.2-0.4) ... 274s Setting up liblzma-dev:s390x (5.4.5-0.3) ... 274s Setting up libubsan1:s390x (14-20240303-1ubuntu1) ... 274s Setting up libpcre2-posix3:s390x (10.42-4ubuntu1) ... 274s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 274s Setting up libnsl-dev:s390x (1.3.0-3) ... 274s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 274s Setting up libasan8:s390x (14-20240303-1ubuntu1) ... 274s Setting up fonts-lmodern (2.005-1) ... 274s Setting up liblua5.4-0:s390x (5.4.6-3) ... 274s Setting up libharfbuzz0b:s390x (8.3.0-2) ... 274s Setting up libthai-data (0.1.29-2) ... 274s Setting up node-bootstrap-sass (3.4.3-2) ... 274s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 274s Setting up libxss1:s390x (1:1.2.3-1build2) ... 274s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 274s Setting up pandoc-data (3.1.3-1) ... 274s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 274s Setting up libisl23:s390x (0.26-3) ... 274s Setting up libc-dev-bin (2.39-0ubuntu2) ... 274s Setting up node-normalize.css (8.0.1-5) ... 274s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 274s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 274s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 274s Setting up libcc1-0:s390x (14-20240303-1ubuntu1) ... 274s Setting up libblas-dev:s390x (3.12.0-3) ... 274s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 274s Setting up dctrl-tools (2.24-3build2) ... 274s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 274s Setting up libitm1:s390x (14-20240303-1ubuntu1) ... 274s Setting up libsynctex2:s390x (2023.20230311.66589-9) ... 274s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 274s Setting up libpotrace0:s390x (1.16-2) ... 274s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 274s Setting up libice6:s390x (2:1.0.10-1build2) ... 274s Setting up liblapack3:s390x (3.12.0-3) ... 274s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 274s Setting up libcurl4t64:s390x (8.5.0-2ubuntu7) ... 274s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 274s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 274s Setting up libbibtex-parser-perl (1.04+dfsg-1) ... 274s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 274s Setting up pkgconf:s390x (1.8.1-2) ... 274s Setting up libthai0:s390x (0.1.29-2) ... 274s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 274s Setting up libptexenc1:s390x (2023.20230311.66589-9) ... 274s Setting up cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 274s Setting up pandoc (3.1.3+ds-2) ... 274s Setting up liblapack-dev:s390x (3.12.0-3) ... 274s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 274s Setting up pkg-config:s390x (1.8.1-2) ... 274s Setting up libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 274s Setting up libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 274s Setting up libc6-dev:s390x (2.39-0ubuntu2) ... 274s Setting up curl (8.5.0-2ubuntu7) ... 274s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ... 274s Setting up libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 274s Setting up libsm6:s390x (2:1.2.3-1build2) ... 274s Setting up libicu-dev:s390x (74.2-1ubuntu1) ... 274s Setting up libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 274s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ... 274s Setting up fontconfig (2.15.0-1ubuntu1) ... 276s Regenerating fonts cache... done. 276s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 276s Setting up libxft2:s390x (2.3.6-1) ... 276s Setting up libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 276s Setting up libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 276s Setting up libpcre2-dev:s390x (10.42-4ubuntu1) ... 276s Setting up cpp-13 (13.2.0-17ubuntu2) ... 276s Setting up cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 276s Setting up libtk8.6:s390x (8.6.13-2) ... 276s Setting up libpango-1.0-0:s390x (1.51.0+ds-4) ... 276s Setting up libreadline-dev:s390x (8.2-3) ... 276s Setting up libcairo2:s390x (1.18.0-1) ... 276s Setting up gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 276s Setting up gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 276s Setting up g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 276s Setting up gcc-13 (13.2.0-17ubuntu2) ... 276s Setting up libxt6:s390x (1:1.2.1-1.1) ... 276s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 276s Setting up cpp (4:13.2.0-7ubuntu1) ... 276s Setting up gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 276s Setting up libboost-dev:s390x (1.83.0.1ubuntu2) ... 276s Setting up libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 276s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 276s Setting up libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 276s Setting up g++-13 (13.2.0-17ubuntu2) ... 276s Setting up libxmu6:s390x (2:1.1.3-3) ... 276s Setting up gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 276s Setting up libpng-dev:s390x (1.6.43-1) ... 276s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 276s Setting up g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 276s Setting up libxaw7:s390x (2:1.0.14-1) ... 276s Setting up gcc (4:13.2.0-7ubuntu1) ... 276s Setting up gfortran-13 (13.2.0-17ubuntu2) ... 276s Setting up r-base-core (4.3.2-1build1) ... 276s 276s Creating config file /etc/R/Renviron with new version 276s Setting up r-cran-crayon (1.5.2-1) ... 276s Setting up r-cran-sourcetools (0.1.7-1-1) ... 276s Setting up r-cran-futile.options (1.0.1-3build1) ... 276s Setting up r-cran-lattice (0.22-5-1) ... 276s Setting up r-cran-formatr (1.14-1) ... 276s Setting up r-cran-xml (3.99-0.16.1-1) ... 276s Setting up g++ (4:13.2.0-7ubuntu1) ... 276s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 276s Setting up texlive-binaries (2023.20230311.66589-9) ... 276s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 276s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 276s Setting up build-essential (12.10ubuntu1) ... 276s Setting up r-cran-lazyeval (0.2.2-1build1) ... 276s Setting up r-cran-commonmark (1.9.1-1) ... 276s Setting up r-cran-r6 (2.5.1-1) ... 276s Setting up r-cran-pkgkitten (0.2.3-1) ... 276s Setting up texlive-base (2023.20240207-1) ... 277s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 277s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 277s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 277s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 278s Setting up r-cran-magrittr (2.0.3-1) ... 278s Setting up r-cran-rappdirs (0.3.3-1) ... 278s Setting up r-cran-filelock (1.0.3-1) ... 278s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 278s Setting up r-cran-littler (0.3.19-1) ... 278s Setting up r-cran-bh (1.84.0-1) ... 278s Setting up r-cran-fs (1.6.3+dfsg-1) ... 278s Setting up r-cran-rcpp (1.0.12-1) ... 278s Setting up r-cran-curl (5.2.0+dfsg-1) ... 278s Setting up r-cran-codetools (0.2-19-1) ... 278s Setting up r-bioc-biocgenerics (0.48.1-2) ... 278s Setting up r-cran-rlang (1.1.3-1) ... 278s Setting up r-cran-matrixstats (1.2.0-1) ... 278s Setting up r-bioc-matrixgenerics (1.14.0-1) ... 278s Setting up r-cran-xfun (0.41+dfsg-1) ... 278s Setting up r-cran-sys (3.4.2-1) ... 278s Setting up r-cran-plogr (0.2.0-3build1) ... 278s Setting up r-cran-withr (2.5.0-1) ... 278s Setting up r-cran-mime (0.12-1) ... 278s Setting up r-cran-generics (0.1.3-1) ... 278s Setting up r-cran-base64enc (0.1-3-3) ... 278s Setting up r-cran-abind (1.4-5-2) ... 278s Setting up r-cran-digest (0.6.34-1) ... 278s Setting up r-cran-yaml (2.3.8-1) ... 278s Setting up r-cran-lambda.r (1.2.4-2build1) ... 278s Setting up r-bioc-protgenerics (1.34.0-1) ... 278s Setting up r-cran-evaluate (0.23-1) ... 278s Setting up r-cran-dbi (1.2.2-1) ... 278s Setting up r-cran-highr (0.10+dfsg-1) ... 278s Setting up r-cran-prettyunits (1.2.0-1) ... 278s Setting up r-cran-fansi (1.0.5-1) ... 278s Setting up r-cran-snow (1:0.4.4-2) ... 278s Setting up r-cran-glue (1.7.0-1) ... 278s Setting up r-cran-bit (4.0.5-1) ... 278s Setting up r-cran-xtable (1:1.8-4-2) ... 278s Setting up r-cran-cli (3.6.2-1) ... 278s Setting up gfortran (4:13.2.0-7ubuntu1) ... 278s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 278s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 278s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 278s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 278s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 278s Setting up r-cran-bitops (1.0-7-1) ... 278s Setting up r-cran-bit64 (4.0.5-1) ... 278s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 278s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 278s Setting up r-cran-askpass (1.2.0-1) ... 278s Setting up r-cran-fastmap (1.1.1-1) ... 278s Setting up r-cran-png (0.1-8-1) ... 278s Setting up r-bioc-biobase (2.62.0-1) ... 278s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 278s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 278s Setting up r-cran-utf8 (1.2.4-1) ... 278s Setting up r-cran-stringi (1.8.3-1) ... 278s Setting up texlive-latex-base (2023.20240207-1) ... 278s Setting up r-cran-markdown (1.12+dfsg-1) ... 278s Setting up r-cran-cpp11 (0.4.7-1) ... 278s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 278s Setting up r-cran-runit (0.4.32-3) ... 278s Setting up r-cran-futile.logger (1.4.3-4build1) ... 278s Setting up r-cran-later (1.3.2+dfsg-1) ... 278s Setting up r-cran-matrix (1.6-5-1) ... 278s Setting up r-cran-tinytex (0.49-1) ... 278s Setting up r-cran-knitr (1.45+dfsg-1) ... 278s Setting up r-cran-cachem (1.0.8-1) ... 278s Setting up r-bioc-iranges (2.36.0-1) ... 278s Setting up r-cran-rjson (0.2.21-1) ... 278s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 278s Setting up r-cran-restfulr (0.0.15-1) ... 278s Setting up r-cran-vctrs (0.6.5-1) ... 278s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 278s Setting up r-cran-ellipsis (0.3.2-2) ... 278s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 278s Setting up r-base-dev (4.3.2-1build1) ... 278s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 278s Setting up r-cran-stringr (1.5.1-1) ... 278s Setting up r-bioc-biocparallel (1.36.0-1) ... 278s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 278s Setting up r-cran-xml2 (1.3.6-1) ... 278s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 278s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 278s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 278s Setting up texlive-bibtex-extra (2023.20240207-1) ... 278s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 278s Setting up r-cran-httr (1.4.7+dfsg-1) ... 278s Setting up r-cran-hms (1.1.3-1) ... 278s Setting up r-cran-memoise (2.0.1-1) ... 278s Setting up r-cran-promises (1.2.1+dfsg-1) ... 278s Setting up r-cran-purrr (1.0.2-1) ... 278s Setting up r-cran-blob (1.2.4-1) ... 278s Setting up r-cran-htmltools (0.5.7-1) ... 278s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 278s Setting up r-bioc-xvector (0.42.0-1) ... 278s Setting up r-cran-sass (0.4.8+dfsg-1) ... 278s Setting up r-cran-dplyr (1.1.4-1) ... 278s Setting up r-cran-rsqlite (2.3.4-1) ... 278s Setting up r-cran-progress (1.2.3-1) ... 278s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 278s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 278s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 278s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 278s Setting up r-bioc-annotationfilter (1.26.0+dfsg-1) ... 278s Setting up r-cran-fontawesome (0.5.2-1) ... 278s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 278s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 278s Setting up r-cran-tidyr (1.3.1-1) ... 278s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 278s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 278s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 278s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 278s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 278s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 278s Setting up r-bioc-annotationdbi (1.64.1-1) ... 278s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 278s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 278s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 278s Setting up r-bioc-genomicalignments (1.38.2-1) ... 278s Setting up r-cran-bookdown (0.37+dfsg-1) ... 278s Setting up r-bioc-org.hs.eg.db (3.18.0-1) ... 278s Setting up r-bioc-rtracklayer (1.62.0-1) ... 278s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 278s Setting up r-bioc-bsgenome (1.70.2-1) ... 278s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 278s Setting up r-bioc-ensembldb (2.26.0+dfsg-1) ... 278s Setting up autopkgtest-satdep (0) ... 278s Processing triggers for man-db (2.12.0-3) ... 279s Processing triggers for install-info (7.1-3) ... 279s Processing triggers for libc-bin (2.39-0ubuntu2) ... 279s Processing triggers for tex-common (6.18) ... 279s Running updmap-sys. This may take some time... done. 279s Running mktexlsr /var/lib/texmf ... done. 279s Building format(s) --all. 325s This may take some time... done. 332s (Reading database ... 101792 files and directories currently installed.) 332s Removing autopkgtest-satdep (0) ... 332s autopkgtest [19:12:43]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 332s autopkgtest [19:12:43]: test pkg-r-autopkgtest: [----------------------- 333s Test: Try to load the R library GenomicFeatures 333s 333s R version 4.3.2 (2023-10-31) -- "Eye Holes" 333s Copyright (C) 2023 The R Foundation for Statistical Computing 333s Platform: s390x-ibm-linux-gnu (64-bit) 333s 333s R is free software and comes with ABSOLUTELY NO WARRANTY. 333s You are welcome to redistribute it under certain conditions. 333s Type 'license()' or 'licence()' for distribution details. 333s 333s R is a collaborative project with many contributors. 333s Type 'contributors()' for more information and 333s 'citation()' on how to cite R or R packages in publications. 333s 333s Type 'demo()' for some demos, 'help()' for on-line help, or 333s 'help.start()' for an HTML browser interface to help. 333s Type 'q()' to quit R. 333s 333s > library('GenomicFeatures') 333s Loading required package: BiocGenerics 333s 333s Attaching package: ‘BiocGenerics’ 333s 333s The following objects are masked from ‘package:stats’: 333s 333s IQR, mad, sd, var, xtabs 333s 333s The following objects are masked from ‘package:base’: 333s 333s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 333s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 333s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 333s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 333s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 333s table, tapply, union, unique, unsplit, which.max, which.min 333s 333s Loading required package: S4Vectors 333s Loading required package: stats4 333s 333s Attaching package: ‘S4Vectors’ 333s 333s The following object is masked from ‘package:utils’: 333s 333s findMatches 333s 333s The following objects are masked from ‘package:base’: 333s 333s expand.grid, I, unname 333s 333s Loading required package: IRanges 334s Loading required package: GenomeInfoDb 334s Loading required package: GenomicRanges 335s Loading required package: AnnotationDbi 335s Loading required package: Biobase 335s Welcome to Bioconductor 335s 335s Vignettes contain introductory material; view with 335s 'browseVignettes()'. To cite Bioconductor, see 335s 'citation("Biobase")', and for packages 'citation("pkgname")'. 335s 343s > 343s > 343s Other tests are currently unsupported! 343s They will be progressively added. 344s autopkgtest [19:12:55]: test pkg-r-autopkgtest: -----------------------] 344s autopkgtest [19:12:55]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 344s pkg-r-autopkgtest PASS 344s autopkgtest [19:12:55]: @@@@@@@@@@@@@@@@@@@@ summary 344s pkg-r-autopkgtest PASS 363s Creating nova instance adt-noble-s390x-r-bioc-genomicfeatures-20240316-190711-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...