0s autopkgtest [19:07:11]: starting date and time: 2024-03-16 19:07:11+0000 0s autopkgtest [19:07:11]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [19:07:11]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.83rloy_1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-rcurl,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-genomeinfodb --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-cran-rcurl/1.98-1.14+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-20.secgroup --name adt-noble-s390x-r-bioc-genomeinfodb-20240316-190711-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 97s autopkgtest [19:08:48]: testbed dpkg architecture: s390x 97s autopkgtest [19:08:48]: testbed apt version: 2.7.12 97s autopkgtest [19:08:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 98s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 99s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 99s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3682 kB] 99s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 99s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 99s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 99s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 99s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 99s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 99s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3752 kB] 99s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 99s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 99s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 101s Fetched 8760 kB in 2s (3941 kB/s) 101s Reading package lists... 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s Calculating upgrade... 104s The following packages will be REMOVED: 104s libssl3 104s The following NEW packages will be installed: 104s libssl3t64 104s The following packages have been kept back: 104s curl 104s The following packages will be upgraded: 104s openssl ubuntu-minimal ubuntu-standard 104s 3 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 104s Need to get 2680 kB of archives. 104s After this operation, 23.6 kB of additional disk space will be used. 104s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 105s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 105s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 105s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 105s Fetched 2680 kB in 1s (3894 kB/s) 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 105s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 105s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 105s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 105s wget depends on libssl3 (>= 3.0.0). 105s tnftp depends on libssl3 (>= 3.0.0). 105s tcpdump depends on libssl3 (>= 3.0.0). 105s systemd-resolved depends on libssl3 (>= 3.0.0). 105s systemd depends on libssl3 (>= 3.0.0). 105s sudo depends on libssl3 (>= 3.0.0). 105s s390-tools depends on libssl3 (>= 3.0.0). 105s rsync depends on libssl3 (>= 3.0.0). 105s python3-cryptography depends on libssl3 (>= 3.0.0). 105s openssh-server depends on libssl3 (>= 3.0.10). 105s openssh-client depends on libssl3 (>= 3.0.10). 105s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 105s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 105s libssh-4:s390x depends on libssl3 (>= 3.0.0). 105s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 105s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 105s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 105s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 105s libnvme1 depends on libssl3 (>= 3.0.0). 105s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 105s libkmod2:s390x depends on libssl3 (>= 3.0.0). 105s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 105s libcurl4:s390x depends on libssl3 (>= 3.0.0). 105s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 105s kmod depends on libssl3 (>= 3.0.0). 105s dhcpcd-base depends on libssl3 (>= 3.0.0). 105s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 105s 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 105s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 105s Selecting previously unselected package libssl3t64:s390x. 105s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 105s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 105s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 106s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 106s Unpacking ubuntu-minimal (1.536) over (1.535) ... 106s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 106s Unpacking ubuntu-standard (1.536) over (1.535) ... 106s Setting up ubuntu-minimal (1.536) ... 106s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 106s Setting up ubuntu-standard (1.536) ... 106s Setting up openssl (3.0.13-0ubuntu1) ... 106s Processing triggers for man-db (2.12.0-3) ... 106s Processing triggers for libc-bin (2.39-0ubuntu2) ... 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 107s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 107s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 107s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 107s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 107s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 108s Reading package lists... 108s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s Calculating upgrade... 109s The following packages have been kept back: 109s curl 109s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 112s autopkgtest [19:09:03]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 112s autopkgtest [19:09:03]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-genomeinfodb 114s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomeinfodb 1.38.6+dfsg-1 (dsc) [2300 B] 114s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomeinfodb 1.38.6+dfsg-1 (tar) [3261 kB] 114s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-genomeinfodb 1.38.6+dfsg-1 (diff) [5552 B] 114s gpgv: Signature made Tue Feb 13 12:41:34 2024 UTC 114s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 114s gpgv: issuer "tille@debian.org" 114s gpgv: Can't check signature: No public key 114s dpkg-source: warning: cannot verify inline signature for ./r-bioc-genomeinfodb_1.38.6+dfsg-1.dsc: no acceptable signature found 114s autopkgtest [19:09:05]: testing package r-bioc-genomeinfodb version 1.38.6+dfsg-1 115s autopkgtest [19:09:06]: build not needed 116s autopkgtest [19:09:07]: test pkg-r-autopkgtest: preparing testbed 118s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Starting pkgProblemResolver with broken count: 0 119s Starting 2 pkgProblemResolver with broken count: 0 119s Done 119s The following additional packages will be installed: 119s build-essential cpp cpp-13 cpp-13-s390x-linux-gnu cpp-s390x-linux-gnu curl 119s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 119s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 119s g++ g++-13 g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 119s gcc-13-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-13 119s gfortran-13-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 119s javascript-common libasan8 libatomic1 libbibtex-parser-perl libblas-dev 119s libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin libc6-dev 119s libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 119s libfontconfig1 libfreetype6 libgcc-13-dev libgfortran-13-dev libgfortran5 119s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 119s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 119s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 119s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 119s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 119s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 119s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 119s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 119s liblzma-dev libmpc3 libncurses-dev libnsl-dev libpango-1.0-0 119s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 119s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 119s libpng-dev libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libsharpyuv0 119s libsm6 libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 119s libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 119s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 119s libxrender1 libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 119s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 119s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 119s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics 119s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biomart 119s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 119s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 119s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 119s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 119s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 119s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 119s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 119s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 119s r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 119s r-cran-data.table r-cran-dbi r-cran-dbplyr r-cran-digest r-cran-dplyr 119s r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-filelock 119s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 119s r-cran-futile.options r-cran-generics r-cran-glue r-cran-highr r-cran-hms 119s r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite 119s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle 119s r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats 119s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 119s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits r-cran-progress 119s r-cran-promises r-cran-purrr r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 119s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 119s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 119s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi 119s r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 119s r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 119s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 119s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 119s x11-common xdg-utils zip zlib1g-dev 119s Suggested packages: 119s cpp-doc gcc-13-locales cpp-13-doc debtags g++-multilib g++-13-multilib 119s gcc-13-doc gcc-multilib manpages-dev autoconf automake libtool flex bison 119s gdb gcc-doc gcc-13-multilib gdb-s390x-linux-gnu gfortran-multilib 119s gfortran-doc gfortran-13-multilib gfortran-13-doc libcoarrays-dev apache2 119s | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 119s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 119s libboost-context1.83-dev libboost-contract1.83-dev 119s libboost-coroutine1.83-dev libboost-date-time1.83-dev 119s libboost-exception1.83-dev libboost-fiber1.83-dev 119s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 119s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 119s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 119s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 119s libboost-numpy1.83-dev libboost-program-options1.83-dev 119s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 119s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 119s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 119s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 119s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 119s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 119s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 119s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 119s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 119s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 119s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 119s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 119s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-all r-cran-testthat 119s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc 119s r-cran-doparallel r-bioc-variantannotation r-bioc-shortread 119s r-cran-batchtools r-cran-mockery r-cran-webmockr r-bioc-hdf5array 119s r-bioc-genefilter r-cran-lobstr r-bioc-delayedmatrixstats r-bioc-edger 119s r-bioc-ensembldb r-bioc-annotationfilter r-cran-markdown r-bioc-gviz 119s r-bioc-annotationhub r-bioc-dexseq r-bioc-sparsematrixstats r-bioc-limma 119s r-bioc-rhdf5 r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-rstudioapi 119s r-cran-rmysql r-cran-lubridate r-cran-getopt r-cran-formattable 119s r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins r-cran-scales 119s r-cran-survival r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi 119s r-cran-rlecuyer r-cran-spelling r-cran-bench r-cran-brio r-cran-callr 119s r-cran-here r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper 119s ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 119s texlive-latex-base-doc wp2latex 119s Recommended packages: 119s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 119s r-recommended r-doc-html r-cran-testthat r-bioc-biocversion r-cran-remotes 119s r-cran-downlit r-cran-htmlwidgets r-cran-rstudioapi r-cran-miniui 119s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-ggplot2 119s r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery r-cran-processx 119s r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio 119s r-cran-decor r-cran-desc r-cran-lobstr r-cran-scales r-cran-spelling 119s r-cran-webutils r-cran-xts r-cran-nanotime r-cran-zoo r-cran-rpostgresql 119s r-cran-broom r-cran-rmysql r-cran-unitizer r-cran-rsvg r-cran-survival 119s r-cran-pkgload r-cran-waldo r-cran-cairo r-cran-markdown r-cran-ragg 119s r-cran-jpeg r-cran-readr r-cran-r.rsp r-cran-sf r-cran-gridsvg r-cran-magick 119s r-cran-reticulate r-cran-rgl r-cran-tikzdevice r-cran-svglite 119s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-r.devices 119s r-cran-sodium r-cran-lubridate r-cran-future r-cran-usethis r-cran-dygraphs 119s r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest r-cran-mockr 119s r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 119s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 119s x11-xserver-utils 119s The following packages will be REMOVED: 119s libcurl4 libpsl5 119s The following NEW packages will be installed: 119s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-s390x-linux-gnu 119s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 119s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 119s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 119s g++-13-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-13 gcc-13-s390x-linux-gnu 119s gcc-s390x-linux-gnu gfortran gfortran-13 gfortran-13-s390x-linux-gnu 119s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libatomic1 119s libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev 119s libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 119s libcurl4t64 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgcc-13-dev 119s libgfortran-13-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 119s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 119s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 119s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 119s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 119s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 119s libjs-popper.js libjs-prettify libjs-sifter.js 119s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 119s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libncurses-dev 119s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 119s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 119s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 119s libptexenc1 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev libsynctex2 119s libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 119s libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 119s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6 libzzip-0-13 119s linux-libc-dev node-bootstrap-sass node-html5shiv node-normalize.css pandoc 119s pandoc-data pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core 119s r-base-dev r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 119s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 119s r-bioc-biomart r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray 119s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 119s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 119s r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 119s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 119s r-bioc-summarizedexperiment r-bioc-xvector r-bioc-zlibbioc r-cran-abind 119s r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit 119s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 119s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 119s r-cran-crayon r-cran-curl r-cran-data.table r-cran-dbi r-cran-dbplyr 119s r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi 119s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-formatr r-cran-fs 119s r-cran-futile.logger r-cran-futile.options r-cran-generics r-cran-glue 119s r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr 119s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 119s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 119s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar 119s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-prettyunits 119s r-cran-progress r-cran-promises r-cran-purrr r-cran-r.methodss3 r-cran-r.oo 119s r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl 119s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 119s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 119s r-cran-stringi r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr 119s r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr 119s r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto 119s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 119s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 119s The following packages will be upgraded: 119s curl 119s 1 upgraded, 279 newly installed, 2 to remove and 0 not upgraded. 119s Need to get 437 MB/437 MB of archives. 119s After this operation, 1402 MB of additional disk space will be used. 119s Get:1 /tmp/autopkgtest.D0BBQ5/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [812 B] 119s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 119s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 119s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 119s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 119s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 120s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 120s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 120s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 120s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 120s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 120s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 120s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 120s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [9929 kB] 120s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x cpp-13 s390x 13.2.0-17ubuntu2 [1026 B] 120s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x cpp-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [5308 B] 120s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x cpp s390x 4:13.2.0-7ubuntu1 [22.4 kB] 120s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 120s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 120s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 120s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 120s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 120s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 120s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libgcc-13-dev s390x 13.2.0-17ubuntu2 [1003 kB] 120s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [19.1 MB] 121s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x gcc-13 s390x 13.2.0-17ubuntu2 [467 kB] 121s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x gcc-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1208 B] 121s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x gcc s390x 4:13.2.0-7ubuntu1 [5014 B] 121s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libstdc++-13-dev s390x 13.2.0-17ubuntu2 [2430 kB] 121s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x g++-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [11.3 MB] 121s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x g++-13 s390x 13.2.0-17ubuntu2 [14.4 kB] 121s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x g++-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [956 B] 121s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x g++ s390x 4:13.2.0-7ubuntu1 [1096 B] 121s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 121s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x dctrl-tools s390x 2.24-3build2 [65.4 kB] 121s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 121s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 121s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 121s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 121s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 121s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 121s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 121s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 121s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 122s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 122s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 122s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran-13-dev s390x 13.2.0-17ubuntu2 [623 kB] 122s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13-s390x-linux-gnu s390x 13.2.0-17ubuntu2 [10.4 MB] 122s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-13 s390x 13.2.0-17ubuntu2 [10.3 kB] 122s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x gfortran-s390x-linux-gnu s390x 4:13.2.0-7ubuntu1 [1016 B] 122s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x gfortran s390x 4:13.2.0-7ubuntu1 [1174 B] 122s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x icu-devtools s390x 74.2-1ubuntu1 [224 kB] 122s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x javascript-common all 11+nmu1 [5936 B] 122s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libio-string-perl all 1.08-4 [11.1 kB] 122s Get:55 http://ftpmaster.internal/ubuntu noble/universe s390x liblatex-tounicode-perl all 0.54-2 [29.0 kB] 122s Get:56 http://ftpmaster.internal/ubuntu noble/universe s390x libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 122s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 122s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libblas-dev s390x 3.12.0-3 [239 kB] 122s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libboost1.83-dev s390x 1.83.0-2ubuntu1 [15.3 MB] 123s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libboost-dev s390x 1.83.0.1ubuntu2 [4310 B] 123s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB] 123s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 123s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 123s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 123s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 123s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 123s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libdatrie1 s390x 0.2.13-3 [22.6 kB] 123s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 123s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 123s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 123s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 123s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 123s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libicu-dev s390x 74.2-1ubuntu1 [11.9 MB] 123s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 123s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu1 [264 kB] 123s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 123s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 123s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 123s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 123s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 123s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 123s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 123s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 123s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 123s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 123s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 123s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 123s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 123s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 123s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 123s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 123s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 123s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 123s Get:94 http://ftpmaster.internal/ubuntu noble/main s390x libkpathsea6 s390x 2023.20230311.66589-9 [66.4 kB] 124s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 124s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x liblapack-dev s390x 3.12.0-3 [5983 kB] 124s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblua5.4-0 s390x 5.4.6-3 [179 kB] 124s Get:98 http://ftpmaster.internal/ubuntu noble/main s390x libncurses-dev s390x 6.4+20240113-1ubuntu1 [412 kB] 124s Get:99 http://ftpmaster.internal/ubuntu noble/main s390x libthai-data all 0.1.29-2 [158 kB] 124s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libthai0 s390x 0.1.29-2 [20.6 kB] 124s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libpango-1.0-0 s390x 1.51.0+ds-4 [240 kB] 124s Get:102 http://ftpmaster.internal/ubuntu noble/main s390x libpangoft2-1.0-0 s390x 1.51.0+ds-4 [43.6 kB] 124s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libpangocairo-1.0-0 s390x 1.51.0+ds-4 [28.9 kB] 124s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libpaper1 s390x 1.1.29 [13.3 kB] 124s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libpaper-utils s390x 1.1.29 [8452 B] 124s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 124s Get:107 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-32-0 s390x 10.42-4ubuntu1 [217 kB] 124s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-posix3 s390x 10.42-4ubuntu1 [6704 B] 124s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-dev s390x 10.42-4ubuntu1 [805 kB] 124s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB] 124s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 125s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB] 125s Get:113 http://ftpmaster.internal/ubuntu noble/universe s390x libpotrace0 s390x 1.16-2 [16.4 kB] 125s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libptexenc1 s390x 2023.20230311.66589-9 [41.6 kB] 125s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libreadline-dev s390x 8.2-3 [187 kB] 125s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 125s Get:117 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 125s Get:118 http://ftpmaster.internal/ubuntu noble/main s390x libsynctex2 s390x 2023.20230311.66589-9 [65.0 kB] 125s Get:119 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 125s Get:120 http://ftpmaster.internal/ubuntu noble/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 125s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtexlua53-5 s390x 2023.20230311.66589-9 [132 kB] 125s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 125s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 125s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 125s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 125s Get:126 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 125s Get:127 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 125s Get:128 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB] 125s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB] 125s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libxpm4 s390x 1:3.5.17-1 [40.9 kB] 125s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libxaw7 s390x 2:1.0.14-1 [186 kB] 125s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libxi6 s390x 2:1.8.1-1 [35.7 kB] 125s Get:133 http://ftpmaster.internal/ubuntu noble/universe s390x libzzip-0-13 s390x 0.13.72+dfsg.1-1.1 [26.1 kB] 125s Get:134 http://ftpmaster.internal/ubuntu noble/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 125s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 125s Get:136 http://ftpmaster.internal/ubuntu noble/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 125s Get:137 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc-data all 3.1.3-1 [92.4 kB] 125s Get:138 http://ftpmaster.internal/ubuntu noble/universe s390x pandoc s390x 3.1.3+ds-2 [41.5 MB] 126s Get:139 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB] 126s Get:140 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB] 126s Get:141 http://ftpmaster.internal/ubuntu noble/main s390x pkg-config s390x 1.8.1-2 [7170 B] 126s Get:142 http://ftpmaster.internal/ubuntu noble/main s390x zip s390x 3.0-13 [175 kB] 126s Get:143 http://ftpmaster.internal/ubuntu noble/main s390x unzip s390x 6.0-28ubuntu3 [180 kB] 126s Get:144 http://ftpmaster.internal/ubuntu noble/main s390x xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 126s Get:145 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-core s390x 4.3.2-1build1 [27.1 MB] 127s Get:146 http://ftpmaster.internal/ubuntu noble/main s390x liblzma-dev s390x 5.4.5-0.3 [215 kB] 127s Get:147 http://ftpmaster.internal/ubuntu noble/universe s390x r-base-dev all 4.3.2-1build1 [4336 B] 127s Get:148 http://ftpmaster.internal/ubuntu noble/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 127s Get:149 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocgenerics all 0.48.1-2 [595 kB] 127s Get:150 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biobase s390x 2.62.0-1 [2137 kB] 127s Get:151 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4vectors s390x 0.40.2+dfsg-1 [2063 kB] 127s Get:152 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-iranges s390x 2.36.0-1 [2253 kB] 127s Get:153 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbi all 1.2.2-1 [823 kB] 127s Get:154 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 127s Get:155 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 127s Get:156 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rlang s390x 1.1.3-1 [1672 kB] 127s Get:157 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 127s Get:158 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 127s Get:159 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 127s Get:160 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 127s Get:161 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 127s Get:162 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 127s Get:163 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 127s Get:164 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 127s Get:165 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 127s Get:166 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 127s Get:167 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 127s Get:168 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rsqlite s390x 2.3.4-1 [1454 kB] 127s Get:169 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-curl s390x 5.2.0+dfsg-1 [189 kB] 127s Get:170 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 127s Get:171 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-mime s390x 0.12-1 [35.7 kB] 127s Get:172 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 127s Get:173 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 127s Get:174 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-openssl s390x 2.1.1+dfsg-2 [402 kB] 127s Get:175 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 127s Get:176 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 127s Get:177 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-png s390x 0.1-8-1 [40.5 kB] 127s Get:178 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 127s Get:179 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-xvector s390x 0.42.0-1 [621 kB] 127s Get:180 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bitops s390x 1.0-7-1 [29.6 kB] 127s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x r-cran-rcurl s390x 1.98-1.14+dfsg-1build1 [794 kB] 127s Get:182 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 128s Get:183 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 128s Get:184 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 128s Get:185 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biostrings s390x 2.70.2+dfsg-1 [13.6 MB] 128s Get:186 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 128s Get:187 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 128s Get:188 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 128s Get:189 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 128s Get:190 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 128s Get:191 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 128s Get:192 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 128s Get:193 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 128s Get:194 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-withr all 2.5.0-1 [225 kB] 128s Get:195 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyselect s390x 1.2.0+dfsg-1 [218 kB] 128s Get:196 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dplyr s390x 1.1.4-1 [1515 kB] 128s Get:197 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-purrr s390x 1.0.2-1 [501 kB] 128s Get:198 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringi s390x 1.8.3-1 [885 kB] 128s Get:199 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 129s Get:200 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 129s Get:201 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 129s Get:202 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 129s Get:203 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 129s Get:204 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 129s Get:205 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-formatr all 1.14-1 [152 kB] 129s Get:206 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 129s Get:207 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 129s Get:208 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 129s Get:209 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 129s Get:210 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-codetools all 0.2-19-1 [90.5 kB] 129s Get:211 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 129s Get:212 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocparallel s390x 1.36.0-1 [1351 kB] 129s Get:213 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 129s Get:214 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-digest s390x 0.6.34-1 [187 kB] 129s Get:215 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB] 129s Get:216 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-htmltools s390x 0.5.7-1 [368 kB] 129s Get:217 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-evaluate all 0.23-1 [90.2 kB] 129s Get:218 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xfun s390x 0.41+dfsg-1 [415 kB] 129s Get:219 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-highr all 0.10+dfsg-1 [38.3 kB] 129s Get:220 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-yaml s390x 2.3.8-1 [127 kB] 129s Get:221 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 130s Get:222 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-knitr all 1.45+dfsg-1 [917 kB] 130s Get:223 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 130s Get:224 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fs s390x 1.6.3+dfsg-1 [229 kB] 130s Get:225 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 130s Get:226 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sass s390x 0.4.8+dfsg-1 [1025 kB] 130s Get:227 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 130s Get:228 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 130s Get:229 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-tinytex all 0.49-1 [141 kB] 130s Get:230 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 130s Get:231 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-littler s390x 0.3.19-1 [93.0 kB] 130s Get:232 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 130s Get:233 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rcpp s390x 1.0.12-1 [1985 kB] 130s Get:234 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 130s Get:235 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-promises s390x 1.2.1+dfsg-1 [285 kB] 130s Get:236 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-httpuv s390x 1.6.14+dfsg-1 [519 kB] 130s Get:237 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 130s Get:238 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 130s Get:239 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 130s Get:240 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 130s Get:241 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 130s Get:242 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 130s Get:243 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 130s Get:244 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 130s Get:245 http://ftpmaster.internal/ubuntu noble/universe s390x tex-common all 6.18 [32.8 kB] 130s Get:246 http://ftpmaster.internal/ubuntu noble/main s390x t1utils s390x 1.41-4build2 [61.5 kB] 130s Get:247 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-binaries s390x 2023.20230311.66589-9 [9353 kB] 131s Get:248 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-base all 2023.20240207-1 [21.7 MB] 131s Get:249 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-latex-base all 2023.20240207-1 [1238 kB] 132s Get:250 http://ftpmaster.internal/ubuntu noble/universe s390x texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 135s Get:251 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 135s Get:252 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml s390x 3.99-0.16.1-1 [1735 kB] 135s Get:253 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 135s Get:254 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 135s Get:255 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 135s Get:256 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-xml2 s390x 1.3.6-1 [342 kB] 135s Get:257 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 135s Get:258 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicranges s390x 1.54.1+dfsg-1 [1822 kB] 135s Get:259 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rhtslib s390x 2.4.1+dfsg-1 [1410 kB] 135s Get:260 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rsamtools s390x 2.18.0+dfsg-1 [3688 kB] 135s Get:261 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrixstats s390x 1.2.0-1 [513 kB] 135s Get:262 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 135s Get:263 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-lattice s390x 0.22-5-1 [1341 kB] 135s Get:264 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-matrix s390x 1.6-5-1 [3983 kB] 135s Get:265 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-abind all 1.4-5-2 [63.6 kB] 135s Get:266 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-s4arrays s390x 1.2.0+dfsg-1 [501 kB] 135s Get:267 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-sparsearray s390x 1.2.4+dfsg-1 [1203 kB] 135s Get:268 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-delayedarray s390x 0.28.0+dfsg-1 [1786 kB] 136s Get:269 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 136s Get:270 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicalignments s390x 1.38.2-1 [2134 kB] 136s Get:271 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 136s Get:272 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 136s Get:273 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-rtracklayer s390x 1.62.0-1 [5119 kB] 136s Get:274 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-bsgenome all 1.70.2-1 [6975 kB] 136s Get:275 http://ftpmaster.internal/ubuntu noble/universe s390x r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 136s Get:276 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-data.table s390x 1.14.10+dfsg-1 [1880 kB] 136s Get:277 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 136s Get:278 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.oo all 1.26.0-1 [955 kB] 136s Get:279 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-r.utils all 2.12.3-1 [1386 kB] 136s Get:280 http://ftpmaster.internal/ubuntu noble/universe s390x r-cran-runit all 0.4.32-3 [283 kB] 137s Preconfiguring packages ... 137s Fetched 437 MB in 17s (25.2 MB/s) 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 137s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 137s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 137s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 137s wget depends on libpsl5 (>= 0.16.0). 137s libcurl4:s390x depends on libpsl5 (>= 0.16.0). 137s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 137s 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 137s Removing libpsl5:s390x (0.21.2-1build1) ... 137s Selecting previously unselected package libpsl5t64:s390x. 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 137s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 137s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 137s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 137s s390-tools depends on libcurl4 (>= 7.16.2). 137s 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 137s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 137s Selecting previously unselected package libcurl4t64:s390x. 137s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 137s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 137s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 137s Selecting previously unselected package libc-dev-bin. 137s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 137s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 137s Selecting previously unselected package linux-libc-dev:s390x. 137s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_s390x.deb ... 137s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 138s Selecting previously unselected package libcrypt-dev:s390x. 138s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 138s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 138s Selecting previously unselected package libtirpc-dev:s390x. 138s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 138s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 138s Selecting previously unselected package libnsl-dev:s390x. 138s Preparing to unpack .../005-libnsl-dev_1.3.0-3_s390x.deb ... 138s Unpacking libnsl-dev:s390x (1.3.0-3) ... 138s Selecting previously unselected package rpcsvc-proto. 138s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 138s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 138s Selecting previously unselected package libc6-dev:s390x. 138s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_s390x.deb ... 138s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 138s Selecting previously unselected package libisl23:s390x. 138s Preparing to unpack .../008-libisl23_0.26-3_s390x.deb ... 138s Unpacking libisl23:s390x (0.26-3) ... 138s Selecting previously unselected package libmpc3:s390x. 138s Preparing to unpack .../009-libmpc3_1.3.1-1_s390x.deb ... 138s Unpacking libmpc3:s390x (1.3.1-1) ... 138s Selecting previously unselected package cpp-13-s390x-linux-gnu. 138s Preparing to unpack .../010-cpp-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 138s Unpacking cpp-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package cpp-13. 138s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_s390x.deb ... 138s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package cpp-s390x-linux-gnu. 138s Preparing to unpack .../012-cpp-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 138s Unpacking cpp-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 138s Selecting previously unselected package cpp. 138s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_s390x.deb ... 138s Unpacking cpp (4:13.2.0-7ubuntu1) ... 138s Selecting previously unselected package libcc1-0:s390x. 138s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libgomp1:s390x. 138s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libitm1:s390x. 138s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libatomic1:s390x. 138s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libasan8:s390x. 138s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libubsan1:s390x. 138s Preparing to unpack .../019-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 138s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 138s Selecting previously unselected package libgcc-13-dev:s390x. 138s Preparing to unpack .../020-libgcc-13-dev_13.2.0-17ubuntu2_s390x.deb ... 138s Unpacking libgcc-13-dev:s390x (13.2.0-17ubuntu2) ... 138s Selecting previously unselected package gcc-13-s390x-linux-gnu. 138s Preparing to unpack .../021-gcc-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 138s Unpacking gcc-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package gcc-13. 139s Preparing to unpack .../022-gcc-13_13.2.0-17ubuntu2_s390x.deb ... 139s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package gcc-s390x-linux-gnu. 139s Preparing to unpack .../023-gcc-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 139s Unpacking gcc-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package gcc. 139s Preparing to unpack .../024-gcc_4%3a13.2.0-7ubuntu1_s390x.deb ... 139s Unpacking gcc (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package libstdc++-13-dev:s390x. 139s Preparing to unpack .../025-libstdc++-13-dev_13.2.0-17ubuntu2_s390x.deb ... 139s Unpacking libstdc++-13-dev:s390x (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package g++-13-s390x-linux-gnu. 139s Preparing to unpack .../026-g++-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 139s Unpacking g++-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package g++-13. 139s Preparing to unpack .../027-g++-13_13.2.0-17ubuntu2_s390x.deb ... 139s Unpacking g++-13 (13.2.0-17ubuntu2) ... 139s Selecting previously unselected package g++-s390x-linux-gnu. 139s Preparing to unpack .../028-g++-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 139s Unpacking g++-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package g++. 139s Preparing to unpack .../029-g++_4%3a13.2.0-7ubuntu1_s390x.deb ... 139s Unpacking g++ (4:13.2.0-7ubuntu1) ... 139s Selecting previously unselected package build-essential. 139s Preparing to unpack .../030-build-essential_12.10ubuntu1_s390x.deb ... 139s Unpacking build-essential (12.10ubuntu1) ... 139s Selecting previously unselected package dctrl-tools. 139s Preparing to unpack .../031-dctrl-tools_2.24-3build2_s390x.deb ... 139s Unpacking dctrl-tools (2.24-3build2) ... 139s Selecting previously unselected package libfreetype6:s390x. 139s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 139s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 139s Selecting previously unselected package fonts-dejavu-mono. 139s Preparing to unpack .../033-fonts-dejavu-mono_2.37-8_all.deb ... 139s Unpacking fonts-dejavu-mono (2.37-8) ... 139s Selecting previously unselected package fonts-dejavu-core. 139s Preparing to unpack .../034-fonts-dejavu-core_2.37-8_all.deb ... 139s Unpacking fonts-dejavu-core (2.37-8) ... 139s Selecting previously unselected package fontconfig-config. 139s Preparing to unpack .../035-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 139s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 139s Selecting previously unselected package libfontconfig1:s390x. 139s Preparing to unpack .../036-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 139s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 140s Selecting previously unselected package fontconfig. 140s Preparing to unpack .../037-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 140s Unpacking fontconfig (2.15.0-1ubuntu1) ... 140s Selecting previously unselected package fonts-font-awesome. 140s Preparing to unpack .../038-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 140s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 140s Selecting previously unselected package fonts-glyphicons-halflings. 140s Preparing to unpack .../039-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 140s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 140s Selecting previously unselected package fonts-lmodern. 140s Preparing to unpack .../040-fonts-lmodern_2.005-1_all.deb ... 140s Unpacking fonts-lmodern (2.005-1) ... 140s Selecting previously unselected package fonts-mathjax. 140s Preparing to unpack .../041-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 140s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 140s Selecting previously unselected package libgfortran5:s390x. 140s Preparing to unpack .../042-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 140s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 140s Selecting previously unselected package libgfortran-13-dev:s390x. 140s Preparing to unpack .../043-libgfortran-13-dev_13.2.0-17ubuntu2_s390x.deb ... 140s Unpacking libgfortran-13-dev:s390x (13.2.0-17ubuntu2) ... 140s Selecting previously unselected package gfortran-13-s390x-linux-gnu. 140s Preparing to unpack .../044-gfortran-13-s390x-linux-gnu_13.2.0-17ubuntu2_s390x.deb ... 140s Unpacking gfortran-13-s390x-linux-gnu (13.2.0-17ubuntu2) ... 140s Selecting previously unselected package gfortran-13. 140s Preparing to unpack .../045-gfortran-13_13.2.0-17ubuntu2_s390x.deb ... 140s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 140s Selecting previously unselected package gfortran-s390x-linux-gnu. 140s Preparing to unpack .../046-gfortran-s390x-linux-gnu_4%3a13.2.0-7ubuntu1_s390x.deb ... 140s Unpacking gfortran-s390x-linux-gnu (4:13.2.0-7ubuntu1) ... 140s Selecting previously unselected package gfortran. 140s Preparing to unpack .../047-gfortran_4%3a13.2.0-7ubuntu1_s390x.deb ... 140s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 140s Selecting previously unselected package icu-devtools. 140s Preparing to unpack .../048-icu-devtools_74.2-1ubuntu1_s390x.deb ... 140s Unpacking icu-devtools (74.2-1ubuntu1) ... 140s Selecting previously unselected package javascript-common. 140s Preparing to unpack .../049-javascript-common_11+nmu1_all.deb ... 140s Unpacking javascript-common (11+nmu1) ... 140s Selecting previously unselected package libio-string-perl. 140s Preparing to unpack .../050-libio-string-perl_1.08-4_all.deb ... 140s Unpacking libio-string-perl (1.08-4) ... 140s Selecting previously unselected package liblatex-tounicode-perl. 140s Preparing to unpack .../051-liblatex-tounicode-perl_0.54-2_all.deb ... 140s Unpacking liblatex-tounicode-perl (0.54-2) ... 140s Selecting previously unselected package libbibtex-parser-perl. 140s Preparing to unpack .../052-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 140s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 140s Selecting previously unselected package libblas3:s390x. 140s Preparing to unpack .../053-libblas3_3.12.0-3_s390x.deb ... 140s Unpacking libblas3:s390x (3.12.0-3) ... 140s Selecting previously unselected package libblas-dev:s390x. 140s Preparing to unpack .../054-libblas-dev_3.12.0-3_s390x.deb ... 140s Unpacking libblas-dev:s390x (3.12.0-3) ... 140s Selecting previously unselected package libboost1.83-dev:s390x. 140s Preparing to unpack .../055-libboost1.83-dev_1.83.0-2ubuntu1_s390x.deb ... 140s Unpacking libboost1.83-dev:s390x (1.83.0-2ubuntu1) ... 143s Selecting previously unselected package libboost-dev:s390x. 143s Preparing to unpack .../056-libboost-dev_1.83.0.1ubuntu2_s390x.deb ... 143s Unpacking libboost-dev:s390x (1.83.0.1ubuntu2) ... 143s Selecting previously unselected package libbz2-dev:s390x. 143s Preparing to unpack .../057-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ... 143s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ... 143s Selecting previously unselected package libpixman-1-0:s390x. 143s Preparing to unpack .../058-libpixman-1-0_0.42.2-1_s390x.deb ... 143s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 143s Selecting previously unselected package libxcb-render0:s390x. 143s Preparing to unpack .../059-libxcb-render0_1.15-1_s390x.deb ... 143s Unpacking libxcb-render0:s390x (1.15-1) ... 143s Selecting previously unselected package libxcb-shm0:s390x. 143s Preparing to unpack .../060-libxcb-shm0_1.15-1_s390x.deb ... 143s Unpacking libxcb-shm0:s390x (1.15-1) ... 143s Selecting previously unselected package libxrender1:s390x. 143s Preparing to unpack .../061-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 143s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 143s Selecting previously unselected package libcairo2:s390x. 143s Preparing to unpack .../062-libcairo2_1.18.0-1_s390x.deb ... 143s Unpacking libcairo2:s390x (1.18.0-1) ... 143s Selecting previously unselected package libdatrie1:s390x. 143s Preparing to unpack .../063-libdatrie1_0.2.13-3_s390x.deb ... 143s Unpacking libdatrie1:s390x (0.2.13-3) ... 143s Selecting previously unselected package libdeflate0:s390x. 143s Preparing to unpack .../064-libdeflate0_1.19-1_s390x.deb ... 143s Unpacking libdeflate0:s390x (1.19-1) ... 143s Selecting previously unselected package libgraphite2-3:s390x. 143s Preparing to unpack .../065-libgraphite2-3_1.3.14-2_s390x.deb ... 143s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 143s Selecting previously unselected package libharfbuzz0b:s390x. 143s Preparing to unpack .../066-libharfbuzz0b_8.3.0-2_s390x.deb ... 143s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 143s Selecting previously unselected package x11-common. 143s Preparing to unpack .../067-x11-common_1%3a7.7+23ubuntu2_all.deb ... 143s Unpacking x11-common (1:7.7+23ubuntu2) ... 143s Selecting previously unselected package libice6:s390x. 143s Preparing to unpack .../068-libice6_2%3a1.0.10-1build2_s390x.deb ... 143s Unpacking libice6:s390x (2:1.0.10-1build2) ... 143s Selecting previously unselected package libicu-dev:s390x. 143s Preparing to unpack .../069-libicu-dev_74.2-1ubuntu1_s390x.deb ... 143s Unpacking libicu-dev:s390x (74.2-1ubuntu1) ... 143s Selecting previously unselected package libjpeg-turbo8:s390x. 143s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 143s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 143s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 143s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-2ubuntu1_s390x.deb ... 143s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu1) ... 143s Selecting previously unselected package libjpeg8:s390x. 143s Preparing to unpack .../072-libjpeg8_8c-2ubuntu11_s390x.deb ... 143s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 143s Selecting previously unselected package libjpeg8-dev:s390x. 143s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 143s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 143s Selecting previously unselected package libjpeg-dev:s390x. 143s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 143s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 143s Selecting previously unselected package libjs-bootstrap. 143s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 143s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 143s Selecting previously unselected package libjs-popper.js. 143s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6_all.deb ... 143s Unpacking libjs-popper.js (1.16.1+ds-6) ... 143s Selecting previously unselected package libjs-bootstrap4. 143s Preparing to unpack .../077-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 143s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 143s Selecting previously unselected package libjs-d3. 143s Preparing to unpack .../078-libjs-d3_3.5.17-4_all.deb ... 143s Unpacking libjs-d3 (3.5.17-4) ... 143s Selecting previously unselected package libjs-es5-shim. 143s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ... 143s Unpacking libjs-es5-shim (4.6.7-2) ... 143s Selecting previously unselected package libjs-highlight.js. 143s Preparing to unpack .../080-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 143s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 143s Selecting previously unselected package libjs-jquery. 143s Preparing to unpack .../081-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 143s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 143s Selecting previously unselected package libjs-jquery-datatables. 143s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 143s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 143s Selecting previously unselected package libjs-sifter.js. 143s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 143s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 144s Selecting previously unselected package libjs-microplugin.js. 144s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 144s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 144s Selecting previously unselected package libjs-jquery-selectize.js. 144s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 144s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 144s Selecting previously unselected package libjs-jquery-ui. 144s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 144s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 144s Selecting previously unselected package libjs-json. 144s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1_all.deb ... 144s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 144s Selecting previously unselected package libjs-lunr. 144s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ... 144s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 144s Selecting previously unselected package libjs-prettify. 144s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 144s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 144s Selecting previously unselected package libkpathsea6:s390x. 144s Preparing to unpack .../090-libkpathsea6_2023.20230311.66589-9_s390x.deb ... 144s Unpacking libkpathsea6:s390x (2023.20230311.66589-9) ... 144s Selecting previously unselected package liblapack3:s390x. 144s Preparing to unpack .../091-liblapack3_3.12.0-3_s390x.deb ... 144s Unpacking liblapack3:s390x (3.12.0-3) ... 144s Selecting previously unselected package liblapack-dev:s390x. 144s Preparing to unpack .../092-liblapack-dev_3.12.0-3_s390x.deb ... 144s Unpacking liblapack-dev:s390x (3.12.0-3) ... 144s Selecting previously unselected package liblua5.4-0:s390x. 144s Preparing to unpack .../093-liblua5.4-0_5.4.6-3_s390x.deb ... 144s Unpacking liblua5.4-0:s390x (5.4.6-3) ... 144s Selecting previously unselected package libncurses-dev:s390x. 144s Preparing to unpack .../094-libncurses-dev_6.4+20240113-1ubuntu1_s390x.deb ... 144s Unpacking libncurses-dev:s390x (6.4+20240113-1ubuntu1) ... 144s Selecting previously unselected package libthai-data. 144s Preparing to unpack .../095-libthai-data_0.1.29-2_all.deb ... 144s Unpacking libthai-data (0.1.29-2) ... 144s Selecting previously unselected package libthai0:s390x. 144s Preparing to unpack .../096-libthai0_0.1.29-2_s390x.deb ... 144s Unpacking libthai0:s390x (0.1.29-2) ... 144s Selecting previously unselected package libpango-1.0-0:s390x. 144s Preparing to unpack .../097-libpango-1.0-0_1.51.0+ds-4_s390x.deb ... 144s Unpacking libpango-1.0-0:s390x (1.51.0+ds-4) ... 144s Selecting previously unselected package libpangoft2-1.0-0:s390x. 144s Preparing to unpack .../098-libpangoft2-1.0-0_1.51.0+ds-4_s390x.deb ... 144s Unpacking libpangoft2-1.0-0:s390x (1.51.0+ds-4) ... 144s Selecting previously unselected package libpangocairo-1.0-0:s390x. 144s Preparing to unpack .../099-libpangocairo-1.0-0_1.51.0+ds-4_s390x.deb ... 144s Unpacking libpangocairo-1.0-0:s390x (1.51.0+ds-4) ... 144s Selecting previously unselected package libpaper1:s390x. 144s Preparing to unpack .../100-libpaper1_1.1.29_s390x.deb ... 144s Unpacking libpaper1:s390x (1.1.29) ... 144s Selecting previously unselected package libpaper-utils. 144s Preparing to unpack .../101-libpaper-utils_1.1.29_s390x.deb ... 144s Unpacking libpaper-utils (1.1.29) ... 144s Selecting previously unselected package libpcre2-16-0:s390x. 144s Preparing to unpack .../102-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 144s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 144s Selecting previously unselected package libpcre2-32-0:s390x. 144s Preparing to unpack .../103-libpcre2-32-0_10.42-4ubuntu1_s390x.deb ... 144s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu1) ... 144s Selecting previously unselected package libpcre2-posix3:s390x. 144s Preparing to unpack .../104-libpcre2-posix3_10.42-4ubuntu1_s390x.deb ... 144s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu1) ... 144s Selecting previously unselected package libpcre2-dev:s390x. 144s Preparing to unpack .../105-libpcre2-dev_10.42-4ubuntu1_s390x.deb ... 144s Unpacking libpcre2-dev:s390x (10.42-4ubuntu1) ... 144s Selecting previously unselected package libpkgconf3:s390x. 144s Preparing to unpack .../106-libpkgconf3_1.8.1-2_s390x.deb ... 144s Unpacking libpkgconf3:s390x (1.8.1-2) ... 144s Selecting previously unselected package zlib1g-dev:s390x. 144s Preparing to unpack .../107-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 144s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 144s Selecting previously unselected package libpng-dev:s390x. 144s Preparing to unpack .../108-libpng-dev_1.6.43-1_s390x.deb ... 144s Unpacking libpng-dev:s390x (1.6.43-1) ... 144s Selecting previously unselected package libpotrace0:s390x. 144s Preparing to unpack .../109-libpotrace0_1.16-2_s390x.deb ... 144s Unpacking libpotrace0:s390x (1.16-2) ... 144s Selecting previously unselected package libptexenc1:s390x. 144s Preparing to unpack .../110-libptexenc1_2023.20230311.66589-9_s390x.deb ... 144s Unpacking libptexenc1:s390x (2023.20230311.66589-9) ... 144s Selecting previously unselected package libreadline-dev:s390x. 144s Preparing to unpack .../111-libreadline-dev_8.2-3_s390x.deb ... 144s Unpacking libreadline-dev:s390x (8.2-3) ... 144s Selecting previously unselected package libsharpyuv0:s390x. 144s Preparing to unpack .../112-libsharpyuv0_1.3.2-0.4_s390x.deb ... 144s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 144s Selecting previously unselected package libsm6:s390x. 144s Preparing to unpack .../113-libsm6_2%3a1.2.3-1build2_s390x.deb ... 144s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 144s Selecting previously unselected package libsynctex2:s390x. 144s Preparing to unpack .../114-libsynctex2_2023.20230311.66589-9_s390x.deb ... 144s Unpacking libsynctex2:s390x (2023.20230311.66589-9) ... 144s Selecting previously unselected package libtcl8.6:s390x. 144s Preparing to unpack .../115-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 144s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 144s Selecting previously unselected package libteckit0:s390x. 144s Preparing to unpack .../116-libteckit0_2.5.12+ds1-1_s390x.deb ... 144s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 144s Selecting previously unselected package libtexlua53-5:s390x. 144s Preparing to unpack .../117-libtexlua53-5_2023.20230311.66589-9_s390x.deb ... 144s Unpacking libtexlua53-5:s390x (2023.20230311.66589-9) ... 145s Selecting previously unselected package libjbig0:s390x. 145s Preparing to unpack .../118-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 145s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 145s Selecting previously unselected package libwebp7:s390x. 145s Preparing to unpack .../119-libwebp7_1.3.2-0.4_s390x.deb ... 145s Unpacking libwebp7:s390x (1.3.2-0.4) ... 145s Selecting previously unselected package libtiff6:s390x. 145s Preparing to unpack .../120-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 145s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 145s Selecting previously unselected package libxft2:s390x. 145s Preparing to unpack .../121-libxft2_2.3.6-1_s390x.deb ... 145s Unpacking libxft2:s390x (2.3.6-1) ... 145s Selecting previously unselected package libxss1:s390x. 145s Preparing to unpack .../122-libxss1_1%3a1.2.3-1build2_s390x.deb ... 145s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 145s Selecting previously unselected package libtk8.6:s390x. 145s Preparing to unpack .../123-libtk8.6_8.6.13-2_s390x.deb ... 145s Unpacking libtk8.6:s390x (8.6.13-2) ... 145s Selecting previously unselected package libxt6:s390x. 145s Preparing to unpack .../124-libxt6_1%3a1.2.1-1.1_s390x.deb ... 145s Unpacking libxt6:s390x (1:1.2.1-1.1) ... 145s Selecting previously unselected package libxmu6:s390x. 145s Preparing to unpack .../125-libxmu6_2%3a1.1.3-3_s390x.deb ... 145s Unpacking libxmu6:s390x (2:1.1.3-3) ... 145s Selecting previously unselected package libxpm4:s390x. 145s Preparing to unpack .../126-libxpm4_1%3a3.5.17-1_s390x.deb ... 145s Unpacking libxpm4:s390x (1:3.5.17-1) ... 145s Selecting previously unselected package libxaw7:s390x. 145s Preparing to unpack .../127-libxaw7_2%3a1.0.14-1_s390x.deb ... 145s Unpacking libxaw7:s390x (2:1.0.14-1) ... 145s Selecting previously unselected package libxi6:s390x. 145s Preparing to unpack .../128-libxi6_2%3a1.8.1-1_s390x.deb ... 145s Unpacking libxi6:s390x (2:1.8.1-1) ... 145s Selecting previously unselected package libzzip-0-13:s390x. 145s Preparing to unpack .../129-libzzip-0-13_0.13.72+dfsg.1-1.1_s390x.deb ... 145s Unpacking libzzip-0-13:s390x (0.13.72+dfsg.1-1.1) ... 145s Selecting previously unselected package node-bootstrap-sass. 145s Preparing to unpack .../130-node-bootstrap-sass_3.4.3-2_all.deb ... 145s Unpacking node-bootstrap-sass (3.4.3-2) ... 145s Selecting previously unselected package node-html5shiv. 145s Preparing to unpack .../131-node-html5shiv_3.7.3+dfsg-5_all.deb ... 145s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 145s Selecting previously unselected package node-normalize.css. 145s Preparing to unpack .../132-node-normalize.css_8.0.1-5_all.deb ... 145s Unpacking node-normalize.css (8.0.1-5) ... 145s Selecting previously unselected package pandoc-data. 145s Preparing to unpack .../133-pandoc-data_3.1.3-1_all.deb ... 145s Unpacking pandoc-data (3.1.3-1) ... 145s Selecting previously unselected package pandoc. 145s Preparing to unpack .../134-pandoc_3.1.3+ds-2_s390x.deb ... 145s Unpacking pandoc (3.1.3+ds-2) ... 147s Selecting previously unselected package pkgconf-bin. 147s Preparing to unpack .../135-pkgconf-bin_1.8.1-2_s390x.deb ... 147s Unpacking pkgconf-bin (1.8.1-2) ... 147s Selecting previously unselected package pkgconf:s390x. 147s Preparing to unpack .../136-pkgconf_1.8.1-2_s390x.deb ... 147s Unpacking pkgconf:s390x (1.8.1-2) ... 147s Selecting previously unselected package pkg-config:s390x. 147s Preparing to unpack .../137-pkg-config_1.8.1-2_s390x.deb ... 147s Unpacking pkg-config:s390x (1.8.1-2) ... 147s Selecting previously unselected package zip. 147s Preparing to unpack .../138-zip_3.0-13_s390x.deb ... 147s Unpacking zip (3.0-13) ... 147s Selecting previously unselected package unzip. 147s Preparing to unpack .../139-unzip_6.0-28ubuntu3_s390x.deb ... 147s Unpacking unzip (6.0-28ubuntu3) ... 147s Selecting previously unselected package xdg-utils. 147s Preparing to unpack .../140-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 147s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 147s Selecting previously unselected package r-base-core. 147s Preparing to unpack .../141-r-base-core_4.3.2-1build1_s390x.deb ... 147s Unpacking r-base-core (4.3.2-1build1) ... 147s Selecting previously unselected package liblzma-dev:s390x. 147s Preparing to unpack .../142-liblzma-dev_5.4.5-0.3_s390x.deb ... 147s Unpacking liblzma-dev:s390x (5.4.5-0.3) ... 147s Selecting previously unselected package r-base-dev. 147s Preparing to unpack .../143-r-base-dev_4.3.2-1build1_all.deb ... 147s Unpacking r-base-dev (4.3.2-1build1) ... 147s Selecting previously unselected package pkg-r-autopkgtest. 147s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 147s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 147s Selecting previously unselected package r-bioc-biocgenerics. 147s Preparing to unpack .../145-r-bioc-biocgenerics_0.48.1-2_all.deb ... 147s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 147s Selecting previously unselected package r-bioc-biobase. 147s Preparing to unpack .../146-r-bioc-biobase_2.62.0-1_s390x.deb ... 147s Unpacking r-bioc-biobase (2.62.0-1) ... 147s Selecting previously unselected package r-bioc-s4vectors. 147s Preparing to unpack .../147-r-bioc-s4vectors_0.40.2+dfsg-1_s390x.deb ... 147s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 147s Selecting previously unselected package r-bioc-iranges. 147s Preparing to unpack .../148-r-bioc-iranges_2.36.0-1_s390x.deb ... 147s Unpacking r-bioc-iranges (2.36.0-1) ... 147s Selecting previously unselected package r-cran-dbi. 147s Preparing to unpack .../149-r-cran-dbi_1.2.2-1_all.deb ... 147s Unpacking r-cran-dbi (1.2.2-1) ... 147s Selecting previously unselected package r-cran-bit. 147s Preparing to unpack .../150-r-cran-bit_4.0.5-1_s390x.deb ... 147s Unpacking r-cran-bit (4.0.5-1) ... 147s Selecting previously unselected package r-cran-bit64. 147s Preparing to unpack .../151-r-cran-bit64_4.0.5-1_s390x.deb ... 147s Unpacking r-cran-bit64 (4.0.5-1) ... 147s Selecting previously unselected package r-cran-rlang. 147s Preparing to unpack .../152-r-cran-rlang_1.1.3-1_s390x.deb ... 147s Unpacking r-cran-rlang (1.1.3-1) ... 147s Selecting previously unselected package r-cran-cli. 147s Preparing to unpack .../153-r-cran-cli_3.6.2-1_s390x.deb ... 147s Unpacking r-cran-cli (3.6.2-1) ... 147s Selecting previously unselected package r-cran-glue. 147s Preparing to unpack .../154-r-cran-glue_1.7.0-1_s390x.deb ... 147s Unpacking r-cran-glue (1.7.0-1) ... 147s Selecting previously unselected package r-cran-lifecycle. 147s Preparing to unpack .../155-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 147s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 148s Selecting previously unselected package r-cran-vctrs. 148s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_s390x.deb ... 148s Unpacking r-cran-vctrs (0.6.5-1) ... 148s Selecting previously unselected package r-cran-blob. 148s Preparing to unpack .../157-r-cran-blob_1.2.4-1_all.deb ... 148s Unpacking r-cran-blob (1.2.4-1) ... 148s Selecting previously unselected package r-cran-fastmap. 148s Preparing to unpack .../158-r-cran-fastmap_1.1.1-1_s390x.deb ... 148s Unpacking r-cran-fastmap (1.1.1-1) ... 148s Selecting previously unselected package r-cran-cachem. 148s Preparing to unpack .../159-r-cran-cachem_1.0.8-1_s390x.deb ... 148s Unpacking r-cran-cachem (1.0.8-1) ... 148s Selecting previously unselected package r-cran-memoise. 148s Preparing to unpack .../160-r-cran-memoise_2.0.1-1_all.deb ... 148s Unpacking r-cran-memoise (2.0.1-1) ... 148s Selecting previously unselected package r-cran-pkgconfig. 148s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 148s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 148s Selecting previously unselected package r-cran-plogr. 148s Preparing to unpack .../162-r-cran-plogr_0.2.0-3build1_all.deb ... 148s Unpacking r-cran-plogr (0.2.0-3build1) ... 148s Selecting previously unselected package r-cran-cpp11. 148s Preparing to unpack .../163-r-cran-cpp11_0.4.7-1_all.deb ... 148s Unpacking r-cran-cpp11 (0.4.7-1) ... 148s Selecting previously unselected package r-cran-rsqlite. 148s Preparing to unpack .../164-r-cran-rsqlite_2.3.4-1_s390x.deb ... 148s Unpacking r-cran-rsqlite (2.3.4-1) ... 148s Selecting previously unselected package r-cran-curl. 148s Preparing to unpack .../165-r-cran-curl_5.2.0+dfsg-1_s390x.deb ... 148s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 148s Selecting previously unselected package r-cran-jsonlite. 148s Preparing to unpack .../166-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 148s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 148s Selecting previously unselected package r-cran-mime. 148s Preparing to unpack .../167-r-cran-mime_0.12-1_s390x.deb ... 148s Unpacking r-cran-mime (0.12-1) ... 148s Selecting previously unselected package r-cran-sys. 148s Preparing to unpack .../168-r-cran-sys_3.4.2-1_s390x.deb ... 148s Unpacking r-cran-sys (3.4.2-1) ... 148s Selecting previously unselected package r-cran-askpass. 148s Preparing to unpack .../169-r-cran-askpass_1.2.0-1_s390x.deb ... 148s Unpacking r-cran-askpass (1.2.0-1) ... 148s Selecting previously unselected package r-cran-openssl. 148s Preparing to unpack .../170-r-cran-openssl_2.1.1+dfsg-2_s390x.deb ... 148s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 148s Selecting previously unselected package r-cran-r6. 148s Preparing to unpack .../171-r-cran-r6_2.5.1-1_all.deb ... 148s Unpacking r-cran-r6 (2.5.1-1) ... 148s Selecting previously unselected package r-cran-httr. 148s Preparing to unpack .../172-r-cran-httr_1.4.7+dfsg-1_all.deb ... 148s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 148s Selecting previously unselected package r-cran-png. 148s Preparing to unpack .../173-r-cran-png_0.1-8-1_s390x.deb ... 148s Unpacking r-cran-png (0.1-8-1) ... 148s Selecting previously unselected package r-bioc-zlibbioc. 148s Preparing to unpack .../174-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-xvector. 148s Preparing to unpack .../175-r-bioc-xvector_0.42.0-1_s390x.deb ... 148s Unpacking r-bioc-xvector (0.42.0-1) ... 148s Selecting previously unselected package r-cran-bitops. 148s Preparing to unpack .../176-r-cran-bitops_1.0-7-1_s390x.deb ... 148s Unpacking r-cran-bitops (1.0-7-1) ... 148s Selecting previously unselected package r-cran-rcurl. 148s Preparing to unpack .../177-r-cran-rcurl_1.98-1.14+dfsg-1build1_s390x.deb ... 148s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 148s Selecting previously unselected package r-bioc-genomeinfodbdata. 148s Preparing to unpack .../178-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 148s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 148s Selecting previously unselected package r-bioc-genomeinfodb. 148s Preparing to unpack .../179-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 148s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 148s Selecting previously unselected package r-cran-crayon. 148s Preparing to unpack .../180-r-cran-crayon_1.5.2-1_all.deb ... 148s Unpacking r-cran-crayon (1.5.2-1) ... 148s Selecting previously unselected package r-bioc-biostrings. 148s Preparing to unpack .../181-r-bioc-biostrings_2.70.2+dfsg-1_s390x.deb ... 148s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 148s Selecting previously unselected package r-bioc-keggrest. 148s Preparing to unpack .../182-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 148s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 148s Selecting previously unselected package r-bioc-annotationdbi. 148s Preparing to unpack .../183-r-bioc-annotationdbi_1.64.1-1_all.deb ... 148s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 148s Selecting previously unselected package r-cran-generics. 148s Preparing to unpack .../184-r-cran-generics_0.1.3-1_all.deb ... 148s Unpacking r-cran-generics (0.1.3-1) ... 149s Selecting previously unselected package r-cran-magrittr. 149s Preparing to unpack .../185-r-cran-magrittr_2.0.3-1_s390x.deb ... 149s Unpacking r-cran-magrittr (2.0.3-1) ... 149s Selecting previously unselected package r-cran-fansi. 149s Preparing to unpack .../186-r-cran-fansi_1.0.5-1_s390x.deb ... 149s Unpacking r-cran-fansi (1.0.5-1) ... 149s Selecting previously unselected package r-cran-utf8. 149s Preparing to unpack .../187-r-cran-utf8_1.2.4-1_s390x.deb ... 149s Unpacking r-cran-utf8 (1.2.4-1) ... 149s Selecting previously unselected package r-cran-pillar. 149s Preparing to unpack .../188-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 149s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-tibble. 149s Preparing to unpack .../189-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 149s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 149s Selecting previously unselected package r-cran-withr. 149s Preparing to unpack .../190-r-cran-withr_2.5.0-1_all.deb ... 149s Unpacking r-cran-withr (2.5.0-1) ... 149s Selecting previously unselected package r-cran-tidyselect. 149s Preparing to unpack .../191-r-cran-tidyselect_1.2.0+dfsg-1_s390x.deb ... 149s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-dplyr. 149s Preparing to unpack .../192-r-cran-dplyr_1.1.4-1_s390x.deb ... 149s Unpacking r-cran-dplyr (1.1.4-1) ... 149s Selecting previously unselected package r-cran-purrr. 149s Preparing to unpack .../193-r-cran-purrr_1.0.2-1_s390x.deb ... 149s Unpacking r-cran-purrr (1.0.2-1) ... 149s Selecting previously unselected package r-cran-stringi. 149s Preparing to unpack .../194-r-cran-stringi_1.8.3-1_s390x.deb ... 149s Unpacking r-cran-stringi (1.8.3-1) ... 149s Selecting previously unselected package r-cran-stringr. 149s Preparing to unpack .../195-r-cran-stringr_1.5.1-1_all.deb ... 149s Unpacking r-cran-stringr (1.5.1-1) ... 149s Selecting previously unselected package r-cran-tidyr. 149s Preparing to unpack .../196-r-cran-tidyr_1.3.1-1_s390x.deb ... 149s Unpacking r-cran-tidyr (1.3.1-1) ... 149s Selecting previously unselected package r-cran-dbplyr. 149s Preparing to unpack .../197-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 149s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-filelock. 149s Preparing to unpack .../198-r-cran-filelock_1.0.3-1_s390x.deb ... 149s Unpacking r-cran-filelock (1.0.3-1) ... 149s Selecting previously unselected package r-bioc-biocfilecache. 149s Preparing to unpack .../199-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 149s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 149s Selecting previously unselected package r-bioc-biocio. 149s Preparing to unpack .../200-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 149s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 149s Selecting previously unselected package r-cran-formatr. 149s Preparing to unpack .../201-r-cran-formatr_1.14-1_all.deb ... 149s Unpacking r-cran-formatr (1.14-1) ... 149s Selecting previously unselected package r-cran-lambda.r. 149s Preparing to unpack .../202-r-cran-lambda.r_1.2.4-2build1_all.deb ... 149s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 149s Selecting previously unselected package r-cran-futile.options. 149s Preparing to unpack .../203-r-cran-futile.options_1.0.1-3build1_all.deb ... 149s Unpacking r-cran-futile.options (1.0.1-3build1) ... 149s Selecting previously unselected package r-cran-futile.logger. 149s Preparing to unpack .../204-r-cran-futile.logger_1.4.3-4build1_all.deb ... 149s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 149s Selecting previously unselected package r-cran-snow. 149s Preparing to unpack .../205-r-cran-snow_1%3a0.4.4-2_all.deb ... 149s Unpacking r-cran-snow (1:0.4.4-2) ... 149s Selecting previously unselected package r-cran-codetools. 149s Preparing to unpack .../206-r-cran-codetools_0.2-19-1_all.deb ... 149s Unpacking r-cran-codetools (0.2-19-1) ... 149s Selecting previously unselected package r-cran-bh. 149s Preparing to unpack .../207-r-cran-bh_1.84.0-1_all.deb ... 149s Unpacking r-cran-bh (1.84.0-1) ... 149s Selecting previously unselected package r-bioc-biocparallel. 149s Preparing to unpack .../208-r-bioc-biocparallel_1.36.0-1_s390x.deb ... 149s Unpacking r-bioc-biocparallel (1.36.0-1) ... 149s Selecting previously unselected package r-cran-base64enc. 149s Preparing to unpack .../209-r-cran-base64enc_0.1-3-3_s390x.deb ... 149s Unpacking r-cran-base64enc (0.1-3-3) ... 149s Selecting previously unselected package r-cran-digest. 149s Preparing to unpack .../210-r-cran-digest_0.6.34-1_s390x.deb ... 149s Unpacking r-cran-digest (0.6.34-1) ... 149s Selecting previously unselected package r-cran-ellipsis. 149s Preparing to unpack .../211-r-cran-ellipsis_0.3.2-2_s390x.deb ... 149s Unpacking r-cran-ellipsis (0.3.2-2) ... 149s Selecting previously unselected package r-cran-htmltools. 149s Preparing to unpack .../212-r-cran-htmltools_0.5.7-1_s390x.deb ... 149s Unpacking r-cran-htmltools (0.5.7-1) ... 149s Selecting previously unselected package r-cran-evaluate. 149s Preparing to unpack .../213-r-cran-evaluate_0.23-1_all.deb ... 149s Unpacking r-cran-evaluate (0.23-1) ... 149s Selecting previously unselected package r-cran-xfun. 149s Preparing to unpack .../214-r-cran-xfun_0.41+dfsg-1_s390x.deb ... 149s Unpacking r-cran-xfun (0.41+dfsg-1) ... 149s Selecting previously unselected package r-cran-highr. 149s Preparing to unpack .../215-r-cran-highr_0.10+dfsg-1_all.deb ... 149s Unpacking r-cran-highr (0.10+dfsg-1) ... 149s Selecting previously unselected package r-cran-yaml. 149s Preparing to unpack .../216-r-cran-yaml_2.3.8-1_s390x.deb ... 149s Unpacking r-cran-yaml (2.3.8-1) ... 149s Selecting previously unselected package libjs-mathjax. 149s Preparing to unpack .../217-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 149s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 150s Selecting previously unselected package r-cran-knitr. 150s Preparing to unpack .../218-r-cran-knitr_1.45+dfsg-1_all.deb ... 150s Unpacking r-cran-knitr (1.45+dfsg-1) ... 151s Selecting previously unselected package r-cran-jquerylib. 151s Preparing to unpack .../219-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 151s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 151s Selecting previously unselected package r-cran-fs. 151s Preparing to unpack .../220-r-cran-fs_1.6.3+dfsg-1_s390x.deb ... 151s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 151s Selecting previously unselected package r-cran-rappdirs. 151s Preparing to unpack .../221-r-cran-rappdirs_0.3.3-1_s390x.deb ... 151s Unpacking r-cran-rappdirs (0.3.3-1) ... 151s Selecting previously unselected package r-cran-sass. 151s Preparing to unpack .../222-r-cran-sass_0.4.8+dfsg-1_s390x.deb ... 151s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 151s Selecting previously unselected package r-cran-bslib. 151s Preparing to unpack .../223-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 151s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 151s Selecting previously unselected package r-cran-fontawesome. 151s Preparing to unpack .../224-r-cran-fontawesome_0.5.2-1_all.deb ... 151s Unpacking r-cran-fontawesome (0.5.2-1) ... 151s Selecting previously unselected package r-cran-tinytex. 151s Preparing to unpack .../225-r-cran-tinytex_0.49-1_all.deb ... 151s Unpacking r-cran-tinytex (0.49-1) ... 151s Selecting previously unselected package libjs-modernizr. 151s Preparing to unpack .../226-libjs-modernizr_2.6.2+ds1-5_all.deb ... 151s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 151s Selecting previously unselected package r-cran-littler. 151s Preparing to unpack .../227-r-cran-littler_0.3.19-1_s390x.deb ... 151s Unpacking r-cran-littler (0.3.19-1) ... 151s Selecting previously unselected package r-cran-pkgkitten. 151s Preparing to unpack .../228-r-cran-pkgkitten_0.2.3-1_all.deb ... 151s Unpacking r-cran-pkgkitten (0.2.3-1) ... 151s Selecting previously unselected package r-cran-rcpp. 151s Preparing to unpack .../229-r-cran-rcpp_1.0.12-1_s390x.deb ... 151s Unpacking r-cran-rcpp (1.0.12-1) ... 151s Selecting previously unselected package r-cran-later. 151s Preparing to unpack .../230-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 151s Unpacking r-cran-later (1.3.2+dfsg-1) ... 151s Selecting previously unselected package r-cran-promises. 151s Preparing to unpack .../231-r-cran-promises_1.2.1+dfsg-1_s390x.deb ... 151s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 151s Selecting previously unselected package r-cran-httpuv. 151s Preparing to unpack .../232-r-cran-httpuv_1.6.14+dfsg-1_s390x.deb ... 151s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 151s Selecting previously unselected package r-cran-xtable. 151s Preparing to unpack .../233-r-cran-xtable_1%3a1.8-4-2_all.deb ... 151s Unpacking r-cran-xtable (1:1.8-4-2) ... 151s Selecting previously unselected package r-cran-sourcetools. 151s Preparing to unpack .../234-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 151s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 151s Selecting previously unselected package r-cran-commonmark. 151s Preparing to unpack .../235-r-cran-commonmark_1.9.1-1_s390x.deb ... 151s Unpacking r-cran-commonmark (1.9.1-1) ... 151s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 151s Preparing to unpack .../236-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 151s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 151s Selecting previously unselected package r-cran-shiny. 151s Preparing to unpack .../237-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 151s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 151s Selecting previously unselected package r-cran-rmarkdown. 151s Preparing to unpack .../238-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 151s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 151s Selecting previously unselected package r-cran-bookdown. 151s Preparing to unpack .../239-r-cran-bookdown_0.37+dfsg-1_all.deb ... 151s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 151s Selecting previously unselected package r-cran-biocmanager. 151s Preparing to unpack .../240-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 151s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 152s Selecting previously unselected package tex-common. 152s Preparing to unpack .../241-tex-common_6.18_all.deb ... 152s Unpacking tex-common (6.18) ... 152s Selecting previously unselected package t1utils. 152s Preparing to unpack .../242-t1utils_1.41-4build2_s390x.deb ... 152s Unpacking t1utils (1.41-4build2) ... 152s Selecting previously unselected package texlive-binaries. 152s Preparing to unpack .../243-texlive-binaries_2023.20230311.66589-9_s390x.deb ... 152s Unpacking texlive-binaries (2023.20230311.66589-9) ... 152s Selecting previously unselected package texlive-base. 152s Preparing to unpack .../244-texlive-base_2023.20240207-1_all.deb ... 152s Unpacking texlive-base (2023.20240207-1) ... 154s Selecting previously unselected package texlive-latex-base. 154s Preparing to unpack .../245-texlive-latex-base_2023.20240207-1_all.deb ... 154s Unpacking texlive-latex-base (2023.20240207-1) ... 155s Selecting previously unselected package texlive-bibtex-extra. 155s Preparing to unpack .../246-texlive-bibtex-extra_2023.20240207-1_all.deb ... 155s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 162s Selecting previously unselected package r-bioc-biocstyle. 162s Preparing to unpack .../247-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 162s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 162s Selecting previously unselected package r-cran-xml. 162s Preparing to unpack .../248-r-cran-xml_3.99-0.16.1-1_s390x.deb ... 162s Unpacking r-cran-xml (3.99-0.16.1-1) ... 162s Selecting previously unselected package r-cran-hms. 162s Preparing to unpack .../249-r-cran-hms_1.1.3-1_all.deb ... 162s Unpacking r-cran-hms (1.1.3-1) ... 162s Selecting previously unselected package r-cran-prettyunits. 162s Preparing to unpack .../250-r-cran-prettyunits_1.2.0-1_all.deb ... 162s Unpacking r-cran-prettyunits (1.2.0-1) ... 162s Selecting previously unselected package r-cran-progress. 162s Preparing to unpack .../251-r-cran-progress_1.2.3-1_all.deb ... 162s Unpacking r-cran-progress (1.2.3-1) ... 162s Selecting previously unselected package r-cran-xml2. 162s Preparing to unpack .../252-r-cran-xml2_1.3.6-1_s390x.deb ... 162s Unpacking r-cran-xml2 (1.3.6-1) ... 162s Selecting previously unselected package r-bioc-biomart. 162s Preparing to unpack .../253-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 162s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 162s Selecting previously unselected package r-bioc-genomicranges. 162s Preparing to unpack .../254-r-bioc-genomicranges_1.54.1+dfsg-1_s390x.deb ... 162s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 162s Selecting previously unselected package r-bioc-rhtslib. 162s Preparing to unpack .../255-r-bioc-rhtslib_2.4.1+dfsg-1_s390x.deb ... 162s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 162s Selecting previously unselected package r-bioc-rsamtools. 162s Preparing to unpack .../256-r-bioc-rsamtools_2.18.0+dfsg-1_s390x.deb ... 162s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 162s Selecting previously unselected package r-cran-matrixstats. 162s Preparing to unpack .../257-r-cran-matrixstats_1.2.0-1_s390x.deb ... 162s Unpacking r-cran-matrixstats (1.2.0-1) ... 162s Selecting previously unselected package r-bioc-matrixgenerics. 162s Preparing to unpack .../258-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 162s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 162s Selecting previously unselected package r-cran-lattice. 162s Preparing to unpack .../259-r-cran-lattice_0.22-5-1_s390x.deb ... 162s Unpacking r-cran-lattice (0.22-5-1) ... 162s Selecting previously unselected package r-cran-matrix. 162s Preparing to unpack .../260-r-cran-matrix_1.6-5-1_s390x.deb ... 162s Unpacking r-cran-matrix (1.6-5-1) ... 163s Selecting previously unselected package r-cran-abind. 163s Preparing to unpack .../261-r-cran-abind_1.4-5-2_all.deb ... 163s Unpacking r-cran-abind (1.4-5-2) ... 163s Selecting previously unselected package r-bioc-s4arrays. 163s Preparing to unpack .../262-r-bioc-s4arrays_1.2.0+dfsg-1_s390x.deb ... 163s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 163s Selecting previously unselected package r-bioc-sparsearray. 163s Preparing to unpack .../263-r-bioc-sparsearray_1.2.4+dfsg-1_s390x.deb ... 163s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 163s Selecting previously unselected package r-bioc-delayedarray. 163s Preparing to unpack .../264-r-bioc-delayedarray_0.28.0+dfsg-1_s390x.deb ... 163s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 163s Selecting previously unselected package r-bioc-summarizedexperiment. 163s Preparing to unpack .../265-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 163s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 163s Selecting previously unselected package r-bioc-genomicalignments. 163s Preparing to unpack .../266-r-bioc-genomicalignments_1.38.2-1_s390x.deb ... 163s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 163s Selecting previously unselected package r-cran-rjson. 163s Preparing to unpack .../267-r-cran-rjson_0.2.21-1_s390x.deb ... 163s Unpacking r-cran-rjson (0.2.21-1) ... 163s Selecting previously unselected package r-cran-restfulr. 163s Preparing to unpack .../268-r-cran-restfulr_0.0.15-1_s390x.deb ... 163s Unpacking r-cran-restfulr (0.0.15-1) ... 163s Selecting previously unselected package r-bioc-rtracklayer. 163s Preparing to unpack .../269-r-bioc-rtracklayer_1.62.0-1_s390x.deb ... 163s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 163s Selecting previously unselected package r-bioc-bsgenome. 163s Preparing to unpack .../270-r-bioc-bsgenome_1.70.2-1_all.deb ... 163s Unpacking r-bioc-bsgenome (1.70.2-1) ... 163s Selecting previously unselected package r-bioc-genomicfeatures. 163s Preparing to unpack .../271-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 163s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 163s Selecting previously unselected package r-cran-data.table. 163s Preparing to unpack .../272-r-cran-data.table_1.14.10+dfsg-1_s390x.deb ... 163s Unpacking r-cran-data.table (1.14.10+dfsg-1) ... 163s Selecting previously unselected package r-cran-r.methodss3. 163s Preparing to unpack .../273-r-cran-r.methodss3_1.8.2-1_all.deb ... 163s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 163s Selecting previously unselected package r-cran-r.oo. 163s Preparing to unpack .../274-r-cran-r.oo_1.26.0-1_all.deb ... 163s Unpacking r-cran-r.oo (1.26.0-1) ... 163s Selecting previously unselected package r-cran-r.utils. 163s Preparing to unpack .../275-r-cran-r.utils_2.12.3-1_all.deb ... 163s Unpacking r-cran-r.utils (2.12.3-1) ... 163s Selecting previously unselected package r-cran-runit. 163s Preparing to unpack .../276-r-cran-runit_0.4.32-3_all.deb ... 163s Unpacking r-cran-runit (0.4.32-3) ... 163s Selecting previously unselected package autopkgtest-satdep. 163s Preparing to unpack .../277-1-autopkgtest-satdep.deb ... 163s Unpacking autopkgtest-satdep (0) ... 163s Setting up libjs-json (0~20221030+~1.0.8-1) ... 163s Setting up javascript-common (11+nmu1) ... 163s Setting up libgraphite2-3:s390x (1.3.14-2) ... 163s Setting up libpixman-1-0:s390x (0.42.2-1) ... 163s Setting up libsharpyuv0:s390x (1.3.2-0.4) ... 163s Setting up libpaper1:s390x (1.1.29) ... 163s 163s Creating config file /etc/papersize with new version 163s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 163s Setting up libxpm4:s390x (1:3.5.17-1) ... 163s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 163s Setting up libxi6:s390x (2:1.8.1-1) ... 163s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 163s Setting up libdatrie1:s390x (0.2.13-3) ... 163s Setting up libjs-popper.js (1.16.1+ds-6) ... 163s Setting up libxcb-render0:s390x 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update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 168s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 168s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 168s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 168s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 168s Setting up r-cran-bitops (1.0-7-1) ... 168s Setting up r-cran-bit64 (4.0.5-1) ... 168s Setting up r-cran-biocmanager (1.30.22+dfsg-2) ... 168s Setting up r-bioc-zlibbioc (1.48.0+dfsg-1) ... 168s Setting up r-cran-askpass (1.2.0-1) ... 168s Setting up r-cran-fastmap (1.1.1-1) ... 168s Setting up r-cran-png (0.1-8-1) ... 168s Setting up r-cran-r.methodss3 (1.8.2-1) ... 168s Setting up r-bioc-biobase (2.62.0-1) ... 168s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 168s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 168s Setting up r-cran-utf8 (1.2.4-1) ... 168s Setting up r-cran-stringi (1.8.3-1) ... 168s Setting up texlive-latex-base (2023.20240207-1) ... 168s Setting up r-cran-cpp11 (0.4.7-1) ... 168s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 168s Setting up r-cran-runit (0.4.32-3) ... 168s Setting up r-cran-futile.logger (1.4.3-4build1) ... 168s Setting up r-cran-later (1.3.2+dfsg-1) ... 168s Setting up r-cran-matrix (1.6-5-1) ... 168s Setting up r-cran-tinytex (0.49-1) ... 168s Setting up r-cran-knitr (1.45+dfsg-1) ... 168s Setting up r-cran-cachem (1.0.8-1) ... 168s Setting up r-bioc-iranges (2.36.0-1) ... 168s Setting up r-cran-rjson (0.2.21-1) ... 168s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build1) ... 168s Setting up r-cran-restfulr (0.0.15-1) ... 168s Setting up r-cran-vctrs (0.6.5-1) ... 168s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 168s Setting up r-cran-ellipsis (0.3.2-2) ... 168s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 168s Setting up r-base-dev (4.3.2-1build1) ... 168s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 168s Setting up r-cran-stringr (1.5.1-1) ... 168s Setting up r-bioc-biocparallel (1.36.0-1) ... 168s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 168s Setting up r-cran-xml2 (1.3.6-1) ... 168s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 168s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 168s Setting up r-cran-r.oo (1.26.0-1) ... 168s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 168s Setting up texlive-bibtex-extra (2023.20240207-1) ... 168s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 168s Setting up r-cran-httr (1.4.7+dfsg-1) ... 168s Setting up r-cran-hms (1.1.3-1) ... 168s Setting up r-cran-memoise (2.0.1-1) ... 168s Setting up r-cran-promises (1.2.1+dfsg-1) ... 168s Setting up r-cran-purrr (1.0.2-1) ... 168s Setting up r-cran-blob (1.2.4-1) ... 168s Setting up r-cran-htmltools (0.5.7-1) ... 168s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 168s Setting up r-bioc-xvector (0.42.0-1) ... 168s Setting up r-cran-sass (0.4.8+dfsg-1) ... 168s Setting up r-cran-dplyr (1.1.4-1) ... 168s Setting up r-cran-rsqlite (2.3.4-1) ... 168s Setting up r-cran-progress (1.2.3-1) ... 168s Setting up r-cran-r.utils (2.12.3-1) ... 168s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 168s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 168s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 168s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 168s Setting up r-cran-fontawesome (0.5.2-1) ... 168s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 168s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 168s Setting up r-cran-tidyr (1.3.1-1) ... 168s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 168s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 168s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 168s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 168s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 168s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 168s Setting up r-bioc-annotationdbi (1.64.1-1) ... 168s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 168s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 168s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 168s Setting up r-bioc-genomicalignments (1.38.2-1) ... 168s Setting up r-cran-bookdown (0.37+dfsg-1) ... 168s Setting up r-bioc-rtracklayer (1.62.0-1) ... 168s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 168s Setting up r-bioc-bsgenome (1.70.2-1) ... 168s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 168s Setting up autopkgtest-satdep (0) ... 168s Processing triggers for man-db (2.12.0-3) ... 169s Processing triggers for install-info (7.1-3) ... 169s Processing triggers for libc-bin (2.39-0ubuntu2) ... 169s Processing triggers for tex-common (6.18) ... 169s Running updmap-sys. This may take some time... done. 169s Running mktexlsr /var/lib/texmf ... done. 169s Building format(s) --all. 215s This may take some time... done. 223s (Reading database ... 101895 files and directories currently installed.) 223s Removing autopkgtest-satdep (0) ... 224s autopkgtest [19:10:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 224s autopkgtest [19:10:55]: test pkg-r-autopkgtest: [----------------------- 224s Test: Try to load the R library GenomeInfoDb 224s 224s R version 4.3.2 (2023-10-31) -- "Eye Holes" 224s Copyright (C) 2023 The R Foundation for Statistical Computing 224s Platform: s390x-ibm-linux-gnu (64-bit) 224s 224s R is free software and comes with ABSOLUTELY NO WARRANTY. 224s You are welcome to redistribute it under certain conditions. 224s Type 'license()' or 'licence()' for distribution details. 224s 224s R is a collaborative project with many contributors. 224s Type 'contributors()' for more information and 224s 'citation()' on how to cite R or R packages in publications. 224s 224s Type 'demo()' for some demos, 'help()' for on-line help, or 224s 'help.start()' for an HTML browser interface to help. 224s Type 'q()' to quit R. 224s 224s > library('GenomeInfoDb') 224s Loading required package: BiocGenerics 224s 224s Attaching package: ‘BiocGenerics’ 224s 224s The following objects are masked from ‘package:stats’: 224s 224s IQR, mad, sd, var, xtabs 224s 224s The following objects are masked from ‘package:base’: 224s 224s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 224s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 224s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 224s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 224s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 224s table, tapply, union, unique, unsplit, which.max, which.min 224s 224s Loading required package: S4Vectors 224s Loading required package: stats4 225s 225s Attaching package: ‘S4Vectors’ 225s 225s The following object is masked from ‘package:utils’: 225s 225s findMatches 225s 225s The following objects are masked from ‘package:base’: 225s 225s expand.grid, I, unname 225s 225s Loading required package: IRanges 226s > 226s > 226s Other tests are currently unsupported! 226s They will be progressively added. 226s autopkgtest [19:10:57]: test pkg-r-autopkgtest: -----------------------] 227s autopkgtest [19:10:58]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 227s pkg-r-autopkgtest PASS 227s autopkgtest [19:10:58]: @@@@@@@@@@@@@@@@@@@@ summary 227s pkg-r-autopkgtest PASS 240s Creating nova instance adt-noble-s390x-r-bioc-genomeinfodb-20240316-190711-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...