0s autopkgtest [15:31:16]: starting date and time: 2024-03-22 15:31:16+0000 0s autopkgtest [15:31:16]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [15:31:16]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.eigkx78n/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:sphinx --apt-upgrade python-skbio --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/7.2.6-6 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-4.secgroup --name adt-noble-s390x-python-skbio-20240322-153115-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 181s autopkgtest [15:34:17]: testbed dpkg architecture: s390x 181s autopkgtest [15:34:17]: testbed apt version: 2.7.12 181s autopkgtest [15:34:17]: @@@@@@@@@@@@@@@@@@@@ test bed setup 182s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 182s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [497 kB] 182s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 182s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [54.0 kB] 182s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3807 kB] 182s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [663 kB] 182s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 182s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 182s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 182s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4000 kB] 182s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 182s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.1 kB] 182s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 184s Fetched 9201 kB in 2s (4092 kB/s) 185s Reading package lists... 187s Reading package lists... 187s Building dependency tree... 187s Reading state information... 187s Calculating upgrade... 187s The following packages will be upgraded: 187s cloud-init debianutils fonts-ubuntu-console python3-markupsafe 188s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 188s Need to get 719 kB of archives. 188s After this operation, 11.3 kB disk space will be freed. 188s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 188s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 188s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 188s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 188s Preconfiguring packages ... 188s Fetched 719 kB in 0s (1480 kB/s) 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 188s Preparing to unpack .../debianutils_5.17_s390x.deb ... 188s Unpacking debianutils (5.17) over (5.16) ... 188s Setting up debianutils (5.17) ... 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 188s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 188s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 188s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 188s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 188s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 189s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 189s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 189s Setting up cloud-init (24.1.2-0ubuntu1) ... 190s Setting up python3-markupsafe (2.1.5-1build1) ... 190s Processing triggers for man-db (2.12.0-3) ... 191s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 191s Reading package lists... 191s Building dependency tree... 191s Reading state information... 191s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 192s Unknown architecture, assuming PC-style ttyS0 192s sh: Attempting to set up Debian/Ubuntu apt sources automatically 192s sh: Distribution appears to be Ubuntu 193s Reading package lists... 193s Building dependency tree... 193s Reading state information... 193s eatmydata is already the newest version (131-1). 193s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 193s Reading package lists... 193s Building dependency tree... 193s Reading state information... 193s dbus is already the newest version (1.14.10-4ubuntu1). 193s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 193s Reading package lists... 193s Building dependency tree... 193s Reading state information... 193s rng-tools-debian is already the newest version (2.4). 193s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 194s Reading package lists... 194s Building dependency tree... 194s Reading state information... 194s The following packages will be REMOVED: 194s cloud-init* python3-configobj* python3-debconf* 194s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 194s After this operation, 3256 kB disk space will be freed. 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 194s Removing cloud-init (24.1.2-0ubuntu1) ... 194s Removing python3-configobj (5.0.8-3) ... 194s Removing python3-debconf (1.5.86) ... 195s Processing triggers for man-db (2.12.0-3) ... 195s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 195s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 195s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 195s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 195s invoke-rc.d: policy-rc.d denied execution of try-restart. 196s Reading package lists... 196s Building dependency tree... 196s Reading state information... 196s linux-generic is already the newest version (6.8.0-11.11+1). 196s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 196s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 196s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 196s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 198s Reading package lists... 198s Reading package lists... 198s Building dependency tree... 198s Reading state information... 198s Calculating upgrade... 198s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 198s Reading package lists... 199s Building dependency tree... 199s Reading state information... 199s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 199s autopkgtest [15:34:35]: rebooting testbed after setup commands that affected boot 213s autopkgtest [15:34:49]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 215s autopkgtest [15:34:51]: @@@@@@@@@@@@@@@@@@@@ apt-source python-skbio 217s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-skbio 0.5.9-4 (dsc) [2804 B] 217s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-skbio 0.5.9-4 (tar) [3559 kB] 217s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-skbio 0.5.9-4 (diff) [15.7 kB] 218s gpgv: Signature made Sun Feb 11 20:35:02 2024 UTC 218s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 218s gpgv: issuer "tille@debian.org" 218s gpgv: Can't check signature: No public key 218s dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.5.9-4.dsc: no acceptable signature found 218s autopkgtest [15:34:54]: testing package python-skbio version 0.5.9-4 218s autopkgtest [15:34:54]: build not needed 219s autopkgtest [15:34:55]: test import-skbio: preparing testbed 220s Reading package lists... 220s Building dependency tree... 220s Reading state information... 220s Starting pkgProblemResolver with broken count: 1 220s Starting 2 pkgProblemResolver with broken count: 1 220s Investigating (0) autopkgtest-satdep:s390x < none -> 0 @un puN Ib > 220s Broken autopkgtest-satdep:s390x Depends on python3-skbio:s390x < none @un H > 220s Broken autopkgtest-satdep:s390x Depends on python3-pytest:s390x < none | 7.4.4-1 @un uH > 220s Considering python3-pytest:s390x 1 as a solution to autopkgtest-satdep:s390x 9998 220s Re-Instated python3-iniconfig:s390x 220s Re-Instated python3-packaging:s390x 220s Re-Instated python3-pluggy:s390x 220s Re-Instated python3-pytest:s390x 220s Done 220s Some packages could not be installed. This may mean that you have 220s requested an impossible situation or if you are using the unstable 220s distribution that some required packages have not yet been created 220s or been moved out of Incoming. 220s The following information may help to resolve the situation: 220s 220s The following packages have unmet dependencies: 220s autopkgtest-satdep : Depends: python3-skbio but it is not installable 220s E: Unable to correct problems, you have held broken packages. 220s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from noble-proposed 221s Reading package lists... 221s Building dependency tree... 221s Reading state information... 221s Starting pkgProblemResolver with broken count: 1 221s Starting 2 pkgProblemResolver with broken count: 1 221s Investigating (0) autopkgtest-satdep:s390x < none -> 0 @un puN Ib > 221s Broken autopkgtest-satdep:s390x Depends on python3-skbio:s390x < none @un H > 221s Broken autopkgtest-satdep:s390x Depends on python3-pytest:s390x < none | 7.4.4-1 @un uH > 221s Considering python3-pytest:s390x 1 as a solution to autopkgtest-satdep:s390x 9998 221s Re-Instated python3-iniconfig:s390x 221s Re-Instated python3-packaging:s390x 221s Re-Instated python3-pluggy:s390x 221s Re-Instated python3-pytest:s390x 221s Done 221s Some packages could not be installed. This may mean that you have 221s requested an impossible situation or if you are using the unstable 221s distribution that some required packages have not yet been created 221s or been moved out of Incoming. 221s The following information may help to resolve the situation: 221s 221s The following packages have unmet dependencies: 221s autopkgtest-satdep : Depends: python3-skbio but it is not installable 221s E: Unable to correct problems, you have held broken packages. 221s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 221s Reading package lists... 222s Building dependency tree... 222s Reading state information... 222s Package python3-skbio is not available, but is referred to by another package. 222s This may mean that the package is missing, has been obsoleted, or 222s is only available from another source 222s 222s E: Package 'python3-skbio' has no installation candidate 222s import-skbio FAIL badpkg 222s blame: python-skbio 222s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 222s autopkgtest [15:34:58]: test testsuite: preparing testbed 223s Reading package lists... 223s Building dependency tree... 223s Reading state information... 223s Starting pkgProblemResolver with broken count: 1 223s Starting 2 pkgProblemResolver with broken count: 1 223s Investigating (0) autopkgtest-satdep:s390x < none -> 0 @un puN Ib > 223s Broken autopkgtest-satdep:s390x Depends on python3-skbio:s390x < none @un H > 223s Broken autopkgtest-satdep:s390x Depends on python3-pytest:s390x < none | 7.4.4-1 @un uH > 223s Considering python3-pytest:s390x 1 as a solution to autopkgtest-satdep:s390x 9998 223s Re-Instated python3-iniconfig:s390x 223s Re-Instated python3-packaging:s390x 223s Re-Instated python3-pluggy:s390x 223s Re-Instated python3-pytest:s390x 223s Done 223s Some packages could not be installed. This may mean that you have 223s requested an impossible situation or if you are using the unstable 223s distribution that some required packages have not yet been created 223s or been moved out of Incoming. 223s The following information may help to resolve the situation: 223s 223s The following packages have unmet dependencies: 223s autopkgtest-satdep : Depends: python3-skbio but it is not installable 223s E: Unable to correct problems, you have held broken packages. 223s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 223s Reading package lists... 223s Building dependency tree... 223s Reading state information... 223s Package python3-skbio is not available, but is referred to by another package. 223s This may mean that the package is missing, has been obsoleted, or 223s is only available from another source 223s 223s E: Package 'python3-skbio' has no installation candidate 223s testsuite FAIL badpkg 223s blame: python-skbio 223s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 223s autopkgtest [15:34:59]: @@@@@@@@@@@@@@@@@@@@ summary 223s import-skbio FAIL badpkg 223s blame: python-skbio 223s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 223s testsuite FAIL badpkg 223s blame: python-skbio 223s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 235s Creating nova instance adt-noble-s390x-python-skbio-20240322-153115-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID f7ee8f0f-480f-4014-94f0-3be2a19e259d)...