0s autopkgtest [13:46:17]: starting date and time: 2024-03-22 13:46:17+0000 0s autopkgtest [13:46:17]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [13:46:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.z6nw5911/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:sphinx --apt-upgrade python-pybedtools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/7.2.6-6 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-3.secgroup --name adt-noble-s390x-python-pybedtools-20240322-134617-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 84s autopkgtest [13:47:41]: testbed dpkg architecture: s390x 85s autopkgtest [13:47:42]: testbed apt version: 2.7.12 85s autopkgtest [13:47:42]: @@@@@@@@@@@@@@@@@@@@ test bed setup 86s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 86s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 86s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 86s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3771 kB] 86s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [54.0 kB] 86s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [664 kB] 86s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 86s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 86s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 86s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3996 kB] 87s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 87s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.1 kB] 87s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 89s Fetched 9162 kB in 2s (3783 kB/s) 89s Reading package lists... 92s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s Calculating upgrade... 92s The following packages will be upgraded: 92s cloud-init debianutils fonts-ubuntu-console python3-markupsafe 92s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s Need to get 719 kB of archives. 92s After this operation, 11.3 kB disk space will be freed. 92s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 93s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 93s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 93s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 94s Preconfiguring packages ... 94s Fetched 719 kB in 1s (723 kB/s) 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 94s Preparing to unpack .../debianutils_5.17_s390x.deb ... 94s Unpacking debianutils (5.17) over (5.16) ... 94s Setting up debianutils (5.17) ... 94s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 94s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 94s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 94s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 94s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 94s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 94s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 94s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 94s Setting up cloud-init (24.1.2-0ubuntu1) ... 96s Setting up python3-markupsafe (2.1.5-1build1) ... 96s Processing triggers for man-db (2.12.0-3) ... 97s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 97s Reading package lists... 97s Building dependency tree... 97s Reading state information... 97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Unknown architecture, assuming PC-style ttyS0 98s sh: Attempting to set up Debian/Ubuntu apt sources automatically 98s sh: Distribution appears to be Ubuntu 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s eatmydata is already the newest version (131-1). 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 99s dbus is already the newest version (1.14.10-4ubuntu1). 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Reading package lists... 99s Building dependency tree... 99s Reading state information... 100s rng-tools-debian is already the newest version (2.4). 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s The following packages will be REMOVED: 100s cloud-init* python3-configobj* python3-debconf* 100s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 100s After this operation, 3256 kB disk space will be freed. 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 100s Removing cloud-init (24.1.2-0ubuntu1) ... 101s Removing python3-configobj (5.0.8-3) ... 101s Removing python3-debconf (1.5.86) ... 101s Processing triggers for man-db (2.12.0-3) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 101s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 102s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 102s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 102s invoke-rc.d: policy-rc.d denied execution of try-restart. 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s linux-generic is already the newest version (6.8.0-11.11+1). 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 103s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 103s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 103s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 105s Reading package lists... 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s Calculating upgrade... 105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 105s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 106s autopkgtest [13:48:03]: rebooting testbed after setup commands that affected boot 127s autopkgtest [13:48:24]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 130s autopkgtest [13:48:27]: @@@@@@@@@@@@@@@@@@@@ apt-source python-pybedtools 137s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-pybedtools 0.9.1-1 (dsc) [2520 B] 137s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-pybedtools 0.9.1-1 (tar) [12.0 MB] 137s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-pybedtools 0.9.1-1 (diff) [29.9 kB] 137s gpgv: Signature made Wed Nov 1 06:51:36 2023 UTC 137s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 137s gpgv: issuer "tille@debian.org" 137s gpgv: Can't check signature: No public key 137s dpkg-source: warning: cannot verify inline signature for ./python-pybedtools_0.9.1-1.dsc: no acceptable signature found 138s autopkgtest [13:48:35]: testing package python-pybedtools version 0.9.1-1 138s autopkgtest [13:48:35]: build not needed 145s autopkgtest [13:48:42]: test autodep8-python3: preparing testbed 147s Reading package lists... 147s Building dependency tree... 147s Reading state information... 147s Starting pkgProblemResolver with broken count: 1 147s Starting 2 pkgProblemResolver with broken count: 1 148s Investigating (0) autopkgtest-satdep:s390x < none -> 0 @un puN Ib > 148s Broken autopkgtest-satdep:s390x Depends on python3-all:s390x < none | 3.12.1-0ubuntu2 @un uH > 148s Considering python3-all:s390x 1 as a solution to autopkgtest-satdep:s390x 9998 148s Re-Instated python3-all:s390x 148s Broken autopkgtest-satdep:s390x Depends on python3-pybedtools:s390x < none @un H > 148s Done 148s Some packages could not be installed. This may mean that you have 148s requested an impossible situation or if you are using the unstable 148s distribution that some required packages have not yet been created 148s or been moved out of Incoming. 148s The following information may help to resolve the situation: 148s 148s The following packages have unmet dependencies: 148s autopkgtest-satdep : Depends: python3-pybedtools but it is not installable 148s E: Unable to correct problems, you have held broken packages. 148s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from noble-proposed 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 149s Starting pkgProblemResolver with broken count: 1 149s Starting 2 pkgProblemResolver with broken count: 1 149s Investigating (0) autopkgtest-satdep:s390x < none -> 0 @un puN Ib > 149s Broken autopkgtest-satdep:s390x Depends on python3-all:s390x < none | 3.12.1-0ubuntu2 @un uH > 149s Considering python3-all:s390x 1 as a solution to autopkgtest-satdep:s390x 9998 149s Re-Instated python3-all:s390x 149s Broken autopkgtest-satdep:s390x Depends on python3-pybedtools:s390x < none @un H > 149s Done 149s Some packages could not be installed. This may mean that you have 149s requested an impossible situation or if you are using the unstable 149s distribution that some required packages have not yet been created 149s or been moved out of Incoming. 149s The following information may help to resolve the situation: 149s 149s The following packages have unmet dependencies: 149s autopkgtest-satdep : Depends: python3-pybedtools but it is not installable 149s E: Unable to correct problems, you have held broken packages. 149s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Package python3-pybedtools is not available, but is referred to by another package. 149s This may mean that the package is missing, has been obsoleted, or 149s is only available from another source 149s 149s E: Package 'python3-pybedtools' has no installation candidate 149s autodep8-python3 FAIL badpkg 149s blame: python-pybedtools 149s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 149s autopkgtest [13:48:46]: @@@@@@@@@@@@@@@@@@@@ summary 149s autodep8-python3 FAIL badpkg 149s blame: python-pybedtools 149s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 181s Creating nova instance adt-noble-s390x-python-pybedtools-20240322-134617-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID f7ee8f0f-480f-4014-94f0-3be2a19e259d)...