0s autopkgtest [21:59:07]: starting date and time: 2024-03-23 21:59:07+0000 0s autopkgtest [21:59:07]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [21:59:07]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.19misgnn/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:netcdf4-python,src:curl,src:gnutls28,src:hdf5,src:libpsl,src:netcdf,src:nettle,src:openssl,src:orthanc-python --apt-upgrade python-h5netcdf --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=netcdf4-python/1.6.5-1build2 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 hdf5/1.10.10+repack-3.1ubuntu3 libpsl/0.21.2-1.1 netcdf/1:4.9.2-5ubuntu3 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-s390x-9.secgroup --name adt-noble-s390x-python-h5netcdf-20240323-215905-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 131s autopkgtest [22:01:18]: testbed dpkg architecture: s390x 131s autopkgtest [22:01:18]: testbed apt version: 2.7.12 131s autopkgtest [22:01:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 132s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 132s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 132s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 132s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 132s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4028 kB] 132s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [654 kB] 133s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 133s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 133s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 133s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4150 kB] 133s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 133s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.8 kB] 133s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 141s Fetched 9565 kB in 2s (3884 kB/s) 141s Reading package lists... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Calculating upgrade... 144s The following packages will be REMOVED: 144s libssl3 144s The following NEW packages will be installed: 144s libssl3t64 144s The following packages have been kept back: 144s curl 144s The following packages will be upgraded: 144s cloud-init debianutils fonts-ubuntu-console libbsd0 libc-bin libc6 locales 144s openssl python3-markupsafe 144s 9 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 144s Need to get 11.2 MB of archives. 144s After this operation, 229 kB of additional disk space will be used. 144s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 144s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libc6 s390x 2.39-0ubuntu6 [2847 kB] 145s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libc-bin s390x 2.39-0ubuntu6 [654 kB] 145s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 145s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 145s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libbsd0 s390x 0.12.1-1 [46.7 kB] 145s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x locales all 2.39-0ubuntu6 [4232 kB] 146s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 146s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 146s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 146s Preconfiguring packages ... 146s Fetched 11.2 MB in 2s (5329 kB/s) 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 146s Preparing to unpack .../debianutils_5.17_s390x.deb ... 146s Unpacking debianutils (5.17) over (5.16) ... 146s Setting up debianutils (5.17) ... 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 146s Preparing to unpack .../libc6_2.39-0ubuntu6_s390x.deb ... 147s Unpacking libc6:s390x (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 147s Setting up libc6:s390x (2.39-0ubuntu6) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 147s Preparing to unpack .../libc-bin_2.39-0ubuntu6_s390x.deb ... 147s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 147s Setting up libc-bin (2.39-0ubuntu6) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 147s Preparing to unpack .../openssl_3.0.13-0ubuntu2_s390x.deb ... 147s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 147s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 147s wpasupplicant depends on libssl3 (>= 3.0.0). 147s wget depends on libssl3 (>= 3.0.0). 147s tnftp depends on libssl3 (>= 3.0.0). 147s tcpdump depends on libssl3 (>= 3.0.0). 147s systemd-resolved depends on libssl3 (>= 3.0.0). 147s systemd depends on libssl3 (>= 3.0.0). 147s sudo depends on libssl3 (>= 3.0.0). 147s s390-tools depends on libssl3 (>= 3.0.0). 147s rsync depends on libssl3 (>= 3.0.0). 147s python3-cryptography depends on libssl3 (>= 3.0.0). 147s openssh-server depends on libssl3 (>= 3.0.10). 147s openssh-client depends on libssl3 (>= 3.0.10). 147s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 147s libtss2-esys-3.0.2-0:s390x depends on libssl3 (>= 3.0.0). 147s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 147s libssh-4:s390x depends on libssl3 (>= 3.0.0). 147s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 147s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 147s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 147s libnvme1 depends on libssl3 (>= 3.0.0). 147s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 147s libkmod2:s390x depends on libssl3 (>= 3.0.0). 147s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 147s libcurl4:s390x depends on libssl3 (>= 3.0.0). 147s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 147s kmod depends on libssl3 (>= 3.0.0). 147s dhcpcd-base depends on libssl3 (>= 3.0.0). 147s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 147s 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 148s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 148s Selecting previously unselected package libssl3t64:s390x. 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51767 files and directories currently installed.) 148s Preparing to unpack .../0-libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 148s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 148s Preparing to unpack .../1-libbsd0_0.12.1-1_s390x.deb ... 148s Unpacking libbsd0:s390x (0.12.1-1) over (0.11.8-1) ... 148s Preparing to unpack .../2-locales_2.39-0ubuntu6_all.deb ... 148s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 148s Preparing to unpack .../3-fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 148s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 148s Preparing to unpack .../4-python3-markupsafe_2.1.5-1build1_s390x.deb ... 148s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 148s Preparing to unpack .../5-cloud-init_24.1.2-0ubuntu1_all.deb ... 148s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 148s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 148s Setting up cloud-init (24.1.2-0ubuntu1) ... 150s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 150s Setting up locales (2.39-0ubuntu6) ... 151s Generating locales (this might take a while)... 152s en_US.UTF-8... done 152s Generation complete. 153s Setting up python3-markupsafe (2.1.5-1build1) ... 153s Setting up openssl (3.0.13-0ubuntu2) ... 153s Setting up libbsd0:s390x (0.12.1-1) ... 153s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 153s Processing triggers for man-db (2.12.0-3) ... 154s Processing triggers for libc-bin (2.39-0ubuntu6) ... 154s Reading package lists... 155s Building dependency tree... 155s Reading state information... 155s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 155s Unknown architecture, assuming PC-style ttyS0 155s sh: Attempting to set up Debian/Ubuntu apt sources automatically 155s sh: Distribution appears to be Ubuntu 156s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s eatmydata is already the newest version (131-1). 157s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s dbus is already the newest version (1.14.10-4ubuntu1). 157s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s rng-tools-debian is already the newest version (2.4). 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s The following packages will be REMOVED: 158s cloud-init* python3-configobj* python3-debconf* 159s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 159s After this operation, 3256 kB disk space will be freed. 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51779 files and directories currently installed.) 159s Removing cloud-init (24.1.2-0ubuntu1) ... 159s Removing python3-configobj (5.0.8-3) ... 159s Removing python3-debconf (1.5.86) ... 159s Processing triggers for man-db (2.12.0-3) ... 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51390 files and directories currently installed.) 160s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 160s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 160s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 160s invoke-rc.d: policy-rc.d denied execution of try-restart. 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s linux-generic is already the newest version (6.8.0-11.11+1). 161s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 162s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 162s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 166s Reading package lists... 166s Reading package lists...autopkgtest [22:01:53]: rebooting testbed after setup commands that affected boot 166s 166s Building dependency tree... 166s Reading state information... 166s Calculating upgrade... 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 306s autopkgtest [22:04:13]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 309s autopkgtest [22:04:16]: @@@@@@@@@@@@@@@@@@@@ apt-source python-h5netcdf 317s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (dsc) [2405 B] 317s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (tar) [57.8 kB] 317s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (diff) [4476 B] 317s gpgv: Signature made Thu Nov 30 11:03:50 2023 UTC 317s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 317s gpgv: Can't check signature: No public key 317s dpkg-source: warning: cannot verify inline signature for ./python-h5netcdf_1.3.0-1.dsc: no acceptable signature found 317s autopkgtest [22:04:19]: testing package python-h5netcdf version 1.3.0-1 317s autopkgtest [22:04:24]: build not needed 320s autopkgtest [22:04:25]: test command1: preparing testbed 331s Reading package lists... 331s Building dependency tree... 331s Reading state information... 331s Starting pkgProblemResolver with broken count: 0 331s Starting 2 pkgProblemResolver with broken count: 0 331s Done 331s The following additional packages will be installed: 331s libaec0 libblas3 libgfortran5 libhdf5-103-1 libhdf5-hl-100 libjs-jquery 331s libjs-sphinxdoc libjs-underscore liblapack3 liblzf1 libnetcdf19 331s libpython3.11-minimal libpython3.11-stdlib libsz2 python-h5netcdf-doc 331s python3-all python3-cftime python3-h5netcdf python3-h5py python3-h5py-serial 331s python3-iniconfig python3-netcdf4 python3-numpy python3-packaging 331s python3-pluggy python3-pytest python3.11 python3.11-minimal 331s Suggested packages: 331s python-h5py-doc gcc gfortran python3-dev python3.11-venv python3.11-doc 331s binfmt-support 331s Recommended packages: 331s javascript-common 331s The following NEW packages will be installed: 331s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1 331s libhdf5-hl-100 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 331s liblzf1 libnetcdf19 libpython3.11-minimal libpython3.11-stdlib libsz2 331s python-h5netcdf-doc python3-all python3-cftime python3-h5netcdf python3-h5py 331s python3-h5py-serial python3-iniconfig python3-netcdf4 python3-numpy 331s python3-packaging python3-pluggy python3-pytest python3.11 331s python3.11-minimal 331s 0 upgraded, 29 newly installed, 0 to remove and 0 not upgraded. 331s Need to get 21.7 MB/21.7 MB of archives. 331s After this operation, 88.3 MB of additional disk space will be used. 331s Get:1 /tmp/autopkgtest.rBu3KJ/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [736 B] 331s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libpython3.11-minimal s390x 3.11.8-1 [838 kB] 331s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3.11-minimal s390x 3.11.8-1 [2248 kB] 331s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libpython3.11-stdlib s390x 3.11.8-1 [1938 kB] 331s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x python3.11 s390x 3.11.8-1 [589 kB] 331s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] 331s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 331s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 331s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] 331s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-103-1 s390x 1.10.10+repack-3ubuntu1 [1425 kB] 331s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-hl-100 s390x 1.10.10+repack-3ubuntu1 [57.5 kB] 331s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 331s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 331s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libjs-sphinxdoc all 7.2.6-4 [149 kB] 331s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 331s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x liblzf1 s390x 3.6-4 [7020 B] 331s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x libnetcdf19 s390x 1:4.9.2-3ubuntu1 [506 kB] 331s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x python-h5netcdf-doc all 1.3.0-1 [1343 kB] 331s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x python3-all s390x 3.12.1-0ubuntu2 [908 B] 331s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-2 [5137 kB] 332s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cftime s390x 1.6.3-1build1 [342 kB] 332s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py-serial s390x 3.10.0-1ubuntu1 [1535 kB] 332s Get:23 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py all 3.10.0-1ubuntu1 [7970 B] 332s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 332s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5netcdf all 1.3.0-1 [41.4 kB] 332s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 332s Get:27 http://ftpmaster.internal/ubuntu noble/universe s390x python3-netcdf4 s390x 1.6.5-1build1 [851 kB] 332s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] 332s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB] 332s Fetched 21.7 MB in 2s (9193 kB/s) 332s Selecting previously unselected package libpython3.11-minimal:s390x. 332s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51333 files and directories currently installed.) 332s Preparing to unpack .../00-libpython3.11-minimal_3.11.8-1_s390x.deb ... 332s Unpacking libpython3.11-minimal:s390x (3.11.8-1) ... 332s Selecting previously unselected package python3.11-minimal. 332s Preparing to unpack .../01-python3.11-minimal_3.11.8-1_s390x.deb ... 332s Unpacking python3.11-minimal (3.11.8-1) ... 333s Selecting previously unselected package libpython3.11-stdlib:s390x. 333s Preparing to unpack .../02-libpython3.11-stdlib_3.11.8-1_s390x.deb ... 333s Unpacking libpython3.11-stdlib:s390x (3.11.8-1) ... 333s Selecting previously unselected package python3.11. 333s Preparing to unpack .../03-python3.11_3.11.8-1_s390x.deb ... 333s Unpacking python3.11 (3.11.8-1) ... 333s Selecting previously unselected package libaec0:s390x. 333s Preparing to unpack .../04-libaec0_1.1.2-1_s390x.deb ... 333s Unpacking libaec0:s390x (1.1.2-1) ... 333s Selecting previously unselected package libblas3:s390x. 333s Preparing to unpack .../05-libblas3_3.12.0-3_s390x.deb ... 333s Unpacking libblas3:s390x (3.12.0-3) ... 333s Selecting previously unselected package libgfortran5:s390x. 333s Preparing to unpack .../06-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 333s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 333s Selecting previously unselected package libsz2:s390x. 333s Preparing to unpack .../07-libsz2_1.1.2-1_s390x.deb ... 333s Unpacking libsz2:s390x (1.1.2-1) ... 333s Selecting previously unselected package libhdf5-103-1:s390x. 333s Preparing to unpack .../08-libhdf5-103-1_1.10.10+repack-3ubuntu1_s390x.deb ... 333s Unpacking libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 333s Selecting previously unselected package libhdf5-hl-100:s390x. 333s Preparing to unpack .../09-libhdf5-hl-100_1.10.10+repack-3ubuntu1_s390x.deb ... 333s Unpacking libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 333s Selecting previously unselected package libjs-jquery. 333s Preparing to unpack .../10-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 333s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 333s Selecting previously unselected package libjs-underscore. 333s Preparing to unpack .../11-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 333s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 333s Selecting previously unselected package libjs-sphinxdoc. 333s Preparing to unpack .../12-libjs-sphinxdoc_7.2.6-4_all.deb ... 333s Unpacking libjs-sphinxdoc (7.2.6-4) ... 333s Selecting previously unselected package liblapack3:s390x. 333s Preparing to unpack .../13-liblapack3_3.12.0-3_s390x.deb ... 333s Unpacking liblapack3:s390x (3.12.0-3) ... 333s Selecting previously unselected package liblzf1:s390x. 333s Preparing to unpack .../14-liblzf1_3.6-4_s390x.deb ... 333s Unpacking liblzf1:s390x (3.6-4) ... 333s Selecting previously unselected package libnetcdf19:s390x. 333s Preparing to unpack .../15-libnetcdf19_1%3a4.9.2-3ubuntu1_s390x.deb ... 333s Unpacking libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 333s Selecting previously unselected package python-h5netcdf-doc. 333s Preparing to unpack .../16-python-h5netcdf-doc_1.3.0-1_all.deb ... 333s Unpacking python-h5netcdf-doc (1.3.0-1) ... 333s Selecting previously unselected package python3-all. 333s Preparing to unpack .../17-python3-all_3.12.1-0ubuntu2_s390x.deb ... 333s Unpacking python3-all (3.12.1-0ubuntu2) ... 333s Selecting previously unselected package python3-numpy. 333s Preparing to unpack .../18-python3-numpy_1%3a1.24.2-2_s390x.deb ... 333s Unpacking python3-numpy (1:1.24.2-2) ... 333s Selecting previously unselected package python3-cftime. 333s Preparing to unpack .../19-python3-cftime_1.6.3-1build1_s390x.deb ... 333s Unpacking python3-cftime (1.6.3-1build1) ... 333s Selecting previously unselected package python3-h5py-serial. 333s Preparing to unpack .../20-python3-h5py-serial_3.10.0-1ubuntu1_s390x.deb ... 333s Unpacking python3-h5py-serial (3.10.0-1ubuntu1) ... 333s Selecting previously unselected package python3-h5py. 333s Preparing to unpack .../21-python3-h5py_3.10.0-1ubuntu1_all.deb ... 333s Unpacking python3-h5py (3.10.0-1ubuntu1) ... 333s Selecting previously unselected package python3-packaging. 333s Preparing to unpack .../22-python3-packaging_23.2-1_all.deb ... 333s Unpacking python3-packaging (23.2-1) ... 333s Selecting previously unselected package python3-h5netcdf. 334s Preparing to unpack .../23-python3-h5netcdf_1.3.0-1_all.deb ... 334s Unpacking python3-h5netcdf (1.3.0-1) ... 334s Selecting previously unselected package python3-iniconfig. 334s Preparing to unpack .../24-python3-iniconfig_1.1.1-2_all.deb ... 334s Unpacking python3-iniconfig (1.1.1-2) ... 334s Selecting previously unselected package python3-netcdf4. 334s Preparing to unpack .../25-python3-netcdf4_1.6.5-1build1_s390x.deb ... 334s Unpacking python3-netcdf4 (1.6.5-1build1) ... 334s Selecting previously unselected package python3-pluggy. 334s Preparing to unpack .../26-python3-pluggy_1.4.0-1_all.deb ... 334s Unpacking python3-pluggy (1.4.0-1) ... 334s Selecting previously unselected package python3-pytest. 334s Preparing to unpack .../27-python3-pytest_7.4.4-1_all.deb ... 334s Unpacking python3-pytest (7.4.4-1) ... 334s Selecting previously unselected package autopkgtest-satdep. 334s Preparing to unpack .../28-1-autopkgtest-satdep.deb ... 334s Unpacking autopkgtest-satdep (0) ... 336s Setting up python3-iniconfig (1.1.1-2) ... 336s Setting up python3-all (3.12.1-0ubuntu2) ... 336s Setting up libaec0:s390x (1.1.2-1) ... 336s Setting up libblas3:s390x (3.12.0-3) ... 336s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 336s Setting up python3-packaging (23.2-1) ... 336s Setting up liblzf1:s390x (3.6-4) ... 336s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 336s Setting up python3-pluggy (1.4.0-1) ... 336s Setting up libpython3.11-minimal:s390x (3.11.8-1) ... 336s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 336s Setting up libsz2:s390x (1.1.2-1) ... 336s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 336s Setting up python3.11-minimal (3.11.8-1) ... 336s Setting up liblapack3:s390x (3.12.0-3) ... 336s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 336s Setting up python3-pytest (7.4.4-1) ... 336s Setting up libpython3.11-stdlib:s390x (3.11.8-1) ... 336s Setting up libjs-sphinxdoc (7.2.6-4) ... 336s Setting up libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 336s Setting up libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 336s Setting up python3.11 (3.11.8-1) ... 336s Setting up python-h5netcdf-doc (1.3.0-1) ... 336s Setting up python3-numpy (1:1.24.2-2) ... 338s Setting up libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 338s Setting up python3-h5py-serial (3.10.0-1ubuntu1) ... 339s Setting up python3-h5py (3.10.0-1ubuntu1) ... 339s Setting up python3-cftime (1.6.3-1build1) ... 339s Setting up python3-netcdf4 (1.6.5-1build1) ... 339s Setting up python3-h5netcdf (1.3.0-1) ... 339s Setting up autopkgtest-satdep (0) ... 339s Processing triggers for systemd (255.2-3ubuntu2) ... 339s Processing triggers for man-db (2.12.0-3) ... 340s Processing triggers for libc-bin (2.39-0ubuntu6) ... 343s (Reading database ... 53608 files and directories currently installed.) 343s Removing autopkgtest-satdep (0) ... 354s autopkgtest [22:04:51]: test command1: set -e ; cp -a h5netcdf/tests "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -m pytest -v tests ; done 354s autopkgtest [22:04:51]: test command1: [----------------------- 354s Testing with python3.12: 354s ============================= test session starts ============================== 354s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 354s cachedir: .pytest_cache 354s rootdir: /tmp/autopkgtest.rBu3KJ/autopkgtest_tmp/tests 354s configfile: pytest.ini 354s collecting ... collected 101 items 354s 354s tests/test_h5netcdf.py::test_write_legacyapi_read_netCDF4 PASSED [ 0%] 354s tests/test_h5netcdf.py::test_roundtrip_h5netcdf_legacyapi PASSED [ 1%] 354s tests/test_h5netcdf.py::test_write_netCDF4_read_legacyapi PASSED [ 2%] 354s tests/test_h5netcdf.py::test_write_h5netcdf_read_legacyapi PASSED [ 3%] 354s tests/test_h5netcdf.py::test_write_h5netcdf_read_netCDF4 PASSED [ 4%] 354s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-True] PASSED [ 5%] 354s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-False] PASSED [ 6%] 354s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5:/testfile-True] SKIPPED [ 7%] 354s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5:/testfile-False] SKIPPED [ 8%] 354s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[True] PASSED [ 9%] 354s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[False] PASSED [ 10%] 354s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[True] PASSED [ 11%] 354s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[False] PASSED [ 12%] 354s tests/test_h5netcdf.py::test_fileobj[True] PASSED [ 13%] 354s tests/test_h5netcdf.py::test_fileobj[False] PASSED [ 14%] 354s tests/test_h5netcdf.py::test_repr[testfile.nc] PASSED [ 15%] 354s tests/test_h5netcdf.py::test_repr[hdf5:/testfile] SKIPPED (h5pyd pac...) [ 16%] 354s tests/test_h5netcdf.py::test_attrs_api[testfile.nc] PASSED [ 17%] 354s tests/test_h5netcdf.py::test_attrs_api[hdf5:/testfile] SKIPPED (h5py...) [ 18%] 354s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[testfile.nc] PASSED [ 19%] 354s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[hdf5:/testfile] SKIPPED [ 20%] 354s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[testfile.nc] PASSED [ 21%] 354s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[hdf5:/testfile] SKIPPED [ 22%] 354s tests/test_h5netcdf.py::test_error_handling[testfile.nc] PASSED [ 23%] 354s tests/test_h5netcdf.py::test_error_handling[hdf5:/testfile] SKIPPED [ 24%] 354s tests/test_h5netcdf.py::test_decode_string_error[testfile.nc] PASSED [ 25%] 354s tests/test_h5netcdf.py::test_decode_string_error[hdf5:/testfile] SKIPPED [ 26%] 354s tests/test_h5netcdf.py::test_invalid_netcdf4[testfile.nc] PASSED [ 27%] 354s tests/test_h5netcdf.py::test_invalid_netcdf4[hdf5:/testfile] SKIPPED [ 28%] 354s tests/test_h5netcdf.py::test_fake_phony_dims[testfile.nc] PASSED [ 29%] 354s tests/test_h5netcdf.py::test_fake_phony_dims[hdf5:/testfile] SKIPPED [ 30%] 354s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[testfile.nc] PASSED [ 31%] 354s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[hdf5:/testfile] SKIPPED [ 32%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[testfile.nc] PASSED [ 33%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[hdf5:/testfile] SKIPPED [ 34%] 354s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[testfile.nc] PASSED [ 35%] 354s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[hdf5:/testfile] SKIPPED [ 36%] 354s tests/test_h5netcdf.py::test_Netcdf4Dimid PASSED [ 37%] 354s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[True] PASSED [ 38%] 354s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[False] PASSED [ 39%] 354s tests/test_h5netcdf.py::test_nc_properties_new[testfile.nc] PASSED [ 40%] 354s tests/test_h5netcdf.py::test_nc_properties_new[hdf5:/testfile] SKIPPED [ 41%] 354s tests/test_h5netcdf.py::test_failed_read_open_and_clean_delete PASSED [ 42%] 354s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[testfile.nc] PASSED [ 43%] 354s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[hdf5:/testfile] SKIPPED [ 44%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_error[testfile.nc] PASSED [ 45%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_error[hdf5:/testfile] SKIPPED [ 46%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_okay[testfile.nc] PASSED [ 47%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_okay[hdf5:/testfile] SKIPPED [ 48%] 354s tests/test_h5netcdf.py::test_invalid_netcdf_overwrite_valid PASSED [ 49%] 354s tests/test_h5netcdf.py::test_reopen_file_different_dimension_sizes PASSED [ 50%] 354s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[testfile.nc] PASSED [ 51%] 354s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[hdf5:/testfile] SKIPPED [ 52%] 354s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[testfile.nc] PASSED [ 53%] 354s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[hdf5:/testfile] SKIPPED [ 54%] 354s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[testfile.nc] PASSED [ 55%] 354s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[hdf5:/testfile] SKIPPED [ 56%] 354s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[testfile.nc] PASSED [ 57%] 354s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[hdf5:/testfile] SKIPPED [ 58%] 354s tests/test_h5netcdf.py::test_c_api_can_read_unlimited_dimensions PASSED [ 59%] 354s tests/test_h5netcdf.py::test_reading_unlimited_dimensions_created_with_c_api PASSED [ 60%] 354s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[testfile.nc] PASSED [ 61%] 354s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[hdf5:/testfile] SKIPPED [ 62%] 354s tests/test_h5netcdf.py::test_reading_special_datatype_created_with_c_api PASSED [ 63%] 354s tests/test_h5netcdf.py::test_nc4_non_coord PASSED [ 64%] 354s tests/test_h5netcdf.py::test_overwrite_existing_file PASSED [ 65%] 354s tests/test_h5netcdf.py::test_scales_on_append PASSED [ 66%] 354s tests/test_h5netcdf.py::test_create_attach_scales_netcdf4 PASSED [ 67%] 354s tests/test_h5netcdf.py::test_create_attach_scales_legacyapi PASSED [ 68%] 354s tests/test_h5netcdf.py::test_detach_scale PASSED [ 69%] 354s tests/test_h5netcdf.py::test_is_scale PASSED [ 70%] 354s tests/test_h5netcdf.py::test_get_dim_scale_refs PASSED [ 71%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix0] PASSED [ 72%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix1] PASSED [ 73%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix2] PASSED [ 74%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix3] PASSED [ 75%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix4] PASSED [ 76%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix5] PASSED [ 77%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix6] PASSED [ 78%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix7] PASSED [ 79%] 354s tests/test_h5netcdf.py::test_dimensions[read_write_matrix8] PASSED [ 80%] 354s tests/test_h5netcdf.py::test_no_circular_references PASSED [ 81%] 354s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[netCDF4] PASSED [ 82%] 354s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[h5netcdf.legacyapi] PASSED [ 83%] 354s tests/test_h5netcdf.py::test_creation_with_h5netcdf_edit_with_netcdf4 PASSED [ 84%] 354s tests/test_h5netcdf.py::test_track_order_specification PASSED [ 85%] 354s tests/test_h5netcdf.py::test_more_than_7_attr_creation PASSED [ 86%] 354s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[False] PASSED [ 87%] 354s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[True] PASSED [ 88%] 354s tests/test_h5netcdf.py::test_group_names PASSED [ 89%] 354s tests/test_h5netcdf.py::test_legacyapi_endianess PASSED [ 90%] 354s tests/test_h5netcdf.py::test_bool_slicing_length_one_dim PASSED [ 91%] 354s tests/test_h5netcdf.py::test_fancy_indexing PASSED [ 92%] 354s tests/test_h5netcdf.py::test_h5py_chunking PASSED [ 93%] 354s tests/test_h5netcdf.py::test_h5netcdf_chunking PASSED [ 94%] 354s tests/test_h5netcdf.py::test_create_invalid_netcdf_catch_error PASSED [ 95%] 354s tests/test_h5netcdf.py::test_dimensions_in_parent_groups PASSED [ 96%] 354s tests/test_h5netcdf.py::test_array_attributes PASSED [ 97%] 354s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[True] PASSED [ 98%] 354s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[False] PASSED [ 99%] 384s tests/test_h5netcdf.py::test_ros3 PASSED [100%] 384s 384s ======================= 79 passed, 22 skipped in 39.44s ======================== 384s autopkgtest [22:05:31]: test command1: -----------------------] 388s autopkgtest [22:05:32]: test command1: - - - - - - - - - - results - - - - - - - - - - 388s command1 PASS 389s autopkgtest [22:05:36]: @@@@@@@@@@@@@@@@@@@@ summary 389s command1 PASS 404s Creating nova instance adt-noble-s390x-python-h5netcdf-20240323-215905-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID a4b1c77c-a35e-4d28-a8d9-902a1febb465)...