0s autopkgtest [15:09:48]: starting date and time: 2024-03-23 15:09:48+0000 0s autopkgtest [15:09:48]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [15:09:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bj9vxjg1/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade python-h5netcdf --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pytest/8.0.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-s390x-20.secgroup --name adt-noble-s390x-python-h5netcdf-20240323-150948-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 118s autopkgtest [15:11:46]: testbed dpkg architecture: s390x 118s autopkgtest [15:11:46]: testbed apt version: 2.7.12 118s autopkgtest [15:11:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 118s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 118s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 119s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3969 kB] 119s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [493 kB] 119s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 119s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [652 kB] 119s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 119s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 119s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 119s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4143 kB] 119s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 119s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.8 kB] 119s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 122s Fetched 9495 kB in 3s (3078 kB/s) 122s Reading package lists... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade... 126s The following packages will be upgraded: 126s cloud-init debianutils fonts-ubuntu-console libbsd0 libc-bin libc6 locales 126s python3-markupsafe 126s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 126s Need to get 8499 kB of archives. 126s After this operation, 9216 B disk space will be freed. 126s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 126s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libc6 s390x 2.39-0ubuntu6 [2847 kB] 127s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libc-bin s390x 2.39-0ubuntu6 [654 kB] 127s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libbsd0 s390x 0.12.1-1 [46.7 kB] 127s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x locales all 2.39-0ubuntu6 [4232 kB] 127s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 127s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 127s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 128s Preconfiguring packages ... 128s Fetched 8499 kB in 1s (9004 kB/s) 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 128s Preparing to unpack .../debianutils_5.17_s390x.deb ... 128s Unpacking debianutils (5.17) over (5.16) ... 128s Setting up debianutils (5.17) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 128s Preparing to unpack .../libc6_2.39-0ubuntu6_s390x.deb ... 128s Unpacking libc6:s390x (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 128s Setting up libc6:s390x (2.39-0ubuntu6) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 129s Preparing to unpack .../libc-bin_2.39-0ubuntu6_s390x.deb ... 129s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 129s Setting up libc-bin (2.39-0ubuntu6) ... 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 129s Preparing to unpack .../libbsd0_0.12.1-1_s390x.deb ... 129s Unpacking libbsd0:s390x (0.12.1-1) over (0.11.8-1) ... 129s Preparing to unpack .../locales_2.39-0ubuntu6_all.deb ... 129s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 129s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 129s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 129s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 130s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 130s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 130s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 130s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 130s Setting up cloud-init (24.1.2-0ubuntu1) ... 132s Setting up locales (2.39-0ubuntu6) ... 133s Generating locales (this might take a while)... 137s en_US.UTF-8... done 137s Generation complete. 137s Setting up python3-markupsafe (2.1.5-1build1) ... 137s Setting up libbsd0:s390x (0.12.1-1) ... 137s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 137s Processing triggers for man-db (2.12.0-3) ... 139s Processing triggers for libc-bin (2.39-0ubuntu6) ... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s 0 upgraded, 0 newly installed, 0 to remove and 234 not upgraded. 141s Unknown architecture, assuming PC-style ttyS0 141s sh: Attempting to set up Debian/Ubuntu apt sources automatically 141s sh: Distribution appears to be Ubuntu 142s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s eatmydata is already the newest version (131-1). 143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s dbus is already the newest version (1.14.10-4ubuntu1). 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s rng-tools-debian is already the newest version (2.4). 145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s The following packages will be REMOVED: 146s cloud-init* python3-configobj* python3-debconf* 147s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 147s After this operation, 3256 kB disk space will be freed. 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51777 files and directories currently installed.) 147s Removing cloud-init (24.1.2-0ubuntu1) ... 148s Removing python3-configobj (5.0.8-3) ... 148s Removing python3-debconf (1.5.86) ... 148s Processing triggers for man-db (2.12.0-3) ... 148s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51388 files and directories currently installed.) 148s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 149s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 149s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 149s invoke-rc.d: policy-rc.d denied execution of try-restart. 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 151s linux-generic is already the newest version (6.8.0-11.11+1). 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 152s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 152s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 156s Reading package lists... 156s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s Calculating upgrade... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 159s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s autopkgtest [15:12:27]: rebooting testbed after setup commands that affected boot 305s autopkgtest [15:14:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 308s autopkgtest [15:14:56]: @@@@@@@@@@@@@@@@@@@@ apt-source python-h5netcdf 311s Get:1 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (dsc) [2405 B] 311s Get:2 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (tar) [57.8 kB] 311s Get:3 http://ftpmaster.internal/ubuntu noble/universe python-h5netcdf 1.3.0-1 (diff) [4476 B] 311s gpgv: Signature made Thu Nov 30 11:03:50 2023 UTC 311s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 311s gpgv: Can't check signature: No public key 311s dpkg-source: warning: cannot verify inline signature for ./python-h5netcdf_1.3.0-1.dsc: no acceptable signature found 311s autopkgtest [15:14:59]: testing package python-h5netcdf version 1.3.0-1 311s autopkgtest [15:14:59]: build not needed 312s autopkgtest [15:15:00]: test command1: preparing testbed 316s Reading package lists... 316s Building dependency tree... 316s Reading state information... 317s Starting pkgProblemResolver with broken count: 0 317s Starting 2 pkgProblemResolver with broken count: 0 317s Done 317s The following additional packages will be installed: 317s libaec0 libblas3 libgfortran5 libhdf5-103-1 libhdf5-hl-100 libjs-jquery 317s libjs-sphinxdoc libjs-underscore liblapack3 liblzf1 libnetcdf19 317s libpython3.11-minimal libpython3.11-stdlib libsz2 python-h5netcdf-doc 317s python3-all python3-cftime python3-h5netcdf python3-h5py python3-h5py-serial 317s python3-iniconfig python3-netcdf4 python3-numpy python3-packaging 317s python3-pluggy python3-pytest python3.11 python3.11-minimal 317s Suggested packages: 317s python-h5py-doc gcc gfortran python3-dev python3.11-venv python3.11-doc 317s binfmt-support 317s Recommended packages: 317s javascript-common 317s The following NEW packages will be installed: 317s autopkgtest-satdep libaec0 libblas3 libgfortran5 libhdf5-103-1 317s libhdf5-hl-100 libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3 317s liblzf1 libnetcdf19 libpython3.11-minimal libpython3.11-stdlib libsz2 317s python-h5netcdf-doc python3-all python3-cftime python3-h5netcdf python3-h5py 317s python3-h5py-serial python3-iniconfig python3-netcdf4 python3-numpy 317s python3-packaging python3-pluggy python3-pytest python3.11 317s python3.11-minimal 317s 0 upgraded, 29 newly installed, 0 to remove and 0 not upgraded. 317s Need to get 21.7 MB/21.7 MB of archives. 317s After this operation, 88.3 MB of additional disk space will be used. 317s Get:1 /tmp/autopkgtest.bgm1QR/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [736 B] 317s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libpython3.11-minimal s390x 3.11.8-1 [838 kB] 318s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3.11-minimal s390x 3.11.8-1 [2248 kB] 318s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libpython3.11-stdlib s390x 3.11.8-1 [1938 kB] 318s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x python3.11 s390x 3.11.8-1 [589 kB] 318s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] 318s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 318s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 318s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] 318s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-103-1 s390x 1.10.10+repack-3ubuntu1 [1425 kB] 318s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-hl-100 s390x 1.10.10+repack-3ubuntu1 [57.5 kB] 318s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 318s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 318s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libjs-sphinxdoc all 7.2.6-4 [149 kB] 318s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 318s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x liblzf1 s390x 3.6-4 [7020 B] 318s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x libnetcdf19 s390x 1:4.9.2-3ubuntu1 [506 kB] 318s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x python-h5netcdf-doc all 1.3.0-1 [1343 kB] 318s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x python3-all s390x 3.12.1-0ubuntu2 [908 B] 318s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-2 [5137 kB] 318s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cftime s390x 1.6.3-1build1 [342 kB] 318s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py-serial s390x 3.10.0-1ubuntu1 [1535 kB] 318s Get:23 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5py all 3.10.0-1ubuntu1 [7970 B] 318s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 318s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x python3-h5netcdf all 1.3.0-1 [41.4 kB] 318s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 318s Get:27 http://ftpmaster.internal/ubuntu noble/universe s390x python3-netcdf4 s390x 1.6.5-1build1 [851 kB] 318s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] 318s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB] 319s Fetched 21.7 MB in 1s (17.2 MB/s) 319s Selecting previously unselected package libpython3.11-minimal:s390x. 319s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51331 files and directories currently installed.) 319s Preparing to unpack .../00-libpython3.11-minimal_3.11.8-1_s390x.deb ... 319s Unpacking libpython3.11-minimal:s390x (3.11.8-1) ... 319s Selecting previously unselected package python3.11-minimal. 319s Preparing to unpack .../01-python3.11-minimal_3.11.8-1_s390x.deb ... 319s Unpacking python3.11-minimal (3.11.8-1) ... 319s Selecting previously unselected package libpython3.11-stdlib:s390x. 319s Preparing to unpack .../02-libpython3.11-stdlib_3.11.8-1_s390x.deb ... 319s Unpacking libpython3.11-stdlib:s390x (3.11.8-1) ... 319s Selecting previously unselected package python3.11. 319s Preparing to unpack .../03-python3.11_3.11.8-1_s390x.deb ... 319s Unpacking python3.11 (3.11.8-1) ... 319s Selecting previously unselected package libaec0:s390x. 319s Preparing to unpack .../04-libaec0_1.1.2-1_s390x.deb ... 319s Unpacking libaec0:s390x (1.1.2-1) ... 319s Selecting previously unselected package libblas3:s390x. 319s Preparing to unpack .../05-libblas3_3.12.0-3_s390x.deb ... 319s Unpacking libblas3:s390x (3.12.0-3) ... 319s Selecting previously unselected package libgfortran5:s390x. 319s Preparing to unpack .../06-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 319s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 319s Selecting previously unselected package libsz2:s390x. 319s Preparing to unpack .../07-libsz2_1.1.2-1_s390x.deb ... 319s Unpacking libsz2:s390x (1.1.2-1) ... 319s Selecting previously unselected package libhdf5-103-1:s390x. 319s Preparing to unpack .../08-libhdf5-103-1_1.10.10+repack-3ubuntu1_s390x.deb ... 319s Unpacking libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 320s Selecting previously unselected package libhdf5-hl-100:s390x. 320s Preparing to unpack .../09-libhdf5-hl-100_1.10.10+repack-3ubuntu1_s390x.deb ... 320s Unpacking libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 320s Selecting previously unselected package libjs-jquery. 320s Preparing to unpack .../10-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 320s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 320s Selecting previously unselected package libjs-underscore. 320s Preparing to unpack .../11-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 320s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 320s Selecting previously unselected package libjs-sphinxdoc. 320s Preparing to unpack .../12-libjs-sphinxdoc_7.2.6-4_all.deb ... 320s Unpacking libjs-sphinxdoc (7.2.6-4) ... 320s Selecting previously unselected package liblapack3:s390x. 320s Preparing to unpack .../13-liblapack3_3.12.0-3_s390x.deb ... 320s Unpacking liblapack3:s390x (3.12.0-3) ... 320s Selecting previously unselected package liblzf1:s390x. 320s Preparing to unpack .../14-liblzf1_3.6-4_s390x.deb ... 320s Unpacking liblzf1:s390x (3.6-4) ... 320s Selecting previously unselected package libnetcdf19:s390x. 320s Preparing to unpack .../15-libnetcdf19_1%3a4.9.2-3ubuntu1_s390x.deb ... 320s Unpacking libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 320s Selecting previously unselected package python-h5netcdf-doc. 320s Preparing to unpack .../16-python-h5netcdf-doc_1.3.0-1_all.deb ... 320s Unpacking python-h5netcdf-doc (1.3.0-1) ... 320s Selecting previously unselected package python3-all. 320s Preparing to unpack .../17-python3-all_3.12.1-0ubuntu2_s390x.deb ... 320s Unpacking python3-all (3.12.1-0ubuntu2) ... 320s Selecting previously unselected package python3-numpy. 320s Preparing to unpack .../18-python3-numpy_1%3a1.24.2-2_s390x.deb ... 320s Unpacking python3-numpy (1:1.24.2-2) ... 320s Selecting previously unselected package python3-cftime. 320s Preparing to unpack .../19-python3-cftime_1.6.3-1build1_s390x.deb ... 320s Unpacking python3-cftime (1.6.3-1build1) ... 320s Selecting previously unselected package python3-h5py-serial. 320s Preparing to unpack .../20-python3-h5py-serial_3.10.0-1ubuntu1_s390x.deb ... 320s Unpacking python3-h5py-serial (3.10.0-1ubuntu1) ... 320s Selecting previously unselected package python3-h5py. 320s Preparing to unpack .../21-python3-h5py_3.10.0-1ubuntu1_all.deb ... 320s Unpacking python3-h5py (3.10.0-1ubuntu1) ... 320s Selecting previously unselected package python3-packaging. 320s Preparing to unpack .../22-python3-packaging_23.2-1_all.deb ... 320s Unpacking python3-packaging (23.2-1) ... 320s Selecting previously unselected package python3-h5netcdf. 320s Preparing to unpack .../23-python3-h5netcdf_1.3.0-1_all.deb ... 320s Unpacking python3-h5netcdf (1.3.0-1) ... 320s Selecting previously unselected package python3-iniconfig. 320s Preparing to unpack .../24-python3-iniconfig_1.1.1-2_all.deb ... 320s Unpacking python3-iniconfig (1.1.1-2) ... 320s Selecting previously unselected package python3-netcdf4. 320s Preparing to unpack .../25-python3-netcdf4_1.6.5-1build1_s390x.deb ... 320s Unpacking python3-netcdf4 (1.6.5-1build1) ... 320s Selecting previously unselected package python3-pluggy. 320s Preparing to unpack .../26-python3-pluggy_1.4.0-1_all.deb ... 320s Unpacking python3-pluggy (1.4.0-1) ... 320s Selecting previously unselected package python3-pytest. 320s Preparing to unpack .../27-python3-pytest_7.4.4-1_all.deb ... 320s Unpacking python3-pytest (7.4.4-1) ... 320s Selecting previously unselected package autopkgtest-satdep. 320s Preparing to unpack .../28-1-autopkgtest-satdep.deb ... 320s Unpacking autopkgtest-satdep (0) ... 320s Setting up python3-iniconfig (1.1.1-2) ... 320s Setting up python3-all (3.12.1-0ubuntu2) ... 320s Setting up libaec0:s390x (1.1.2-1) ... 320s Setting up libblas3:s390x (3.12.0-3) ... 320s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 320s Setting up python3-packaging (23.2-1) ... 321s Setting up liblzf1:s390x (3.6-4) ... 321s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 321s Setting up python3-pluggy (1.4.0-1) ... 321s Setting up libpython3.11-minimal:s390x (3.11.8-1) ... 321s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 321s Setting up libsz2:s390x (1.1.2-1) ... 321s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 321s Setting up python3.11-minimal (3.11.8-1) ... 322s Setting up liblapack3:s390x (3.12.0-3) ... 322s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 322s Setting up python3-pytest (7.4.4-1) ... 322s Setting up libpython3.11-stdlib:s390x (3.11.8-1) ... 322s Setting up libjs-sphinxdoc (7.2.6-4) ... 322s Setting up libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 322s Setting up libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 322s Setting up python3.11 (3.11.8-1) ... 323s Setting up python-h5netcdf-doc (1.3.0-1) ... 323s Setting up python3-numpy (1:1.24.2-2) ... 326s Setting up libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 326s Setting up python3-h5py-serial (3.10.0-1ubuntu1) ... 326s Setting up python3-h5py (3.10.0-1ubuntu1) ... 327s Setting up python3-cftime (1.6.3-1build1) ... 327s Setting up python3-netcdf4 (1.6.5-1build1) ... 327s Setting up python3-h5netcdf (1.3.0-1) ... 327s Setting up autopkgtest-satdep (0) ... 327s Processing triggers for systemd (255.2-3ubuntu2) ... 327s Processing triggers for man-db (2.12.0-3) ... 328s Processing triggers for libc-bin (2.39-0ubuntu6) ... 332s (Reading database ... 53606 files and directories currently installed.) 332s Removing autopkgtest-satdep (0) ... 333s autopkgtest [15:15:21]: test command1: set -e ; cp -a h5netcdf/tests "$AUTOPKGTEST_TMP" ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -m pytest -v tests ; done 333s autopkgtest [15:15:21]: test command1: [----------------------- 333s Testing with python3.12: 333s ============================= test session starts ============================== 333s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 -- /usr/bin/python3.12 333s cachedir: .pytest_cache 333s rootdir: /tmp/autopkgtest.bgm1QR/autopkgtest_tmp/tests 333s configfile: pytest.ini 333s collecting ... collected 101 items 333s 333s tests/test_h5netcdf.py::test_write_legacyapi_read_netCDF4 PASSED [ 0%] 334s tests/test_h5netcdf.py::test_roundtrip_h5netcdf_legacyapi PASSED [ 1%] 334s tests/test_h5netcdf.py::test_write_netCDF4_read_legacyapi PASSED [ 2%] 334s tests/test_h5netcdf.py::test_write_h5netcdf_read_legacyapi PASSED [ 3%] 334s tests/test_h5netcdf.py::test_write_h5netcdf_read_netCDF4 PASSED [ 4%] 334s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-True] PASSED [ 5%] 334s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[testfile.nc-False] PASSED [ 6%] 334s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5:/testfile-True] SKIPPED [ 7%] 334s tests/test_h5netcdf.py::test_roundtrip_h5netcdf[hdf5:/testfile-False] SKIPPED [ 8%] 334s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[True] PASSED [ 9%] 334s tests/test_h5netcdf.py::test_write_netCDF4_read_h5netcdf[False] PASSED [ 10%] 334s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[True] PASSED [ 11%] 334s tests/test_h5netcdf.py::test_write_legacyapi_read_h5netcdf[False] PASSED [ 12%] 334s tests/test_h5netcdf.py::test_fileobj[True] PASSED [ 13%] 334s tests/test_h5netcdf.py::test_fileobj[False] PASSED [ 14%] 335s tests/test_h5netcdf.py::test_repr[testfile.nc] PASSED [ 15%] 335s tests/test_h5netcdf.py::test_repr[hdf5:/testfile] SKIPPED (h5pyd pac...) [ 16%] 335s tests/test_h5netcdf.py::test_attrs_api[testfile.nc] PASSED [ 17%] 335s tests/test_h5netcdf.py::test_attrs_api[hdf5:/testfile] SKIPPED (h5py...) [ 18%] 335s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[testfile.nc] PASSED [ 19%] 335s tests/test_h5netcdf.py::test_shape_is_tied_to_coordinate[hdf5:/testfile] SKIPPED [ 20%] 335s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[testfile.nc] PASSED [ 21%] 335s tests/test_h5netcdf.py::test_optional_netcdf4_attrs[hdf5:/testfile] SKIPPED [ 22%] 335s tests/test_h5netcdf.py::test_error_handling[testfile.nc] PASSED [ 23%] 335s tests/test_h5netcdf.py::test_error_handling[hdf5:/testfile] SKIPPED [ 24%] 335s tests/test_h5netcdf.py::test_decode_string_error[testfile.nc] PASSED [ 25%] 335s tests/test_h5netcdf.py::test_decode_string_error[hdf5:/testfile] SKIPPED [ 26%] 335s tests/test_h5netcdf.py::test_invalid_netcdf4[testfile.nc] PASSED [ 27%] 335s tests/test_h5netcdf.py::test_invalid_netcdf4[hdf5:/testfile] SKIPPED [ 28%] 335s tests/test_h5netcdf.py::test_fake_phony_dims[testfile.nc] PASSED [ 29%] 335s tests/test_h5netcdf.py::test_fake_phony_dims[hdf5:/testfile] SKIPPED [ 30%] 335s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[testfile.nc] PASSED [ 31%] 335s tests/test_h5netcdf.py::test_invalid_netcdf4_mixed[hdf5:/testfile] SKIPPED [ 32%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[testfile.nc] PASSED [ 33%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_malformed_dimension_scales[hdf5:/testfile] SKIPPED [ 34%] 335s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[testfile.nc] PASSED [ 35%] 335s tests/test_h5netcdf.py::test_hierarchical_access_auto_create[hdf5:/testfile] SKIPPED [ 36%] 335s tests/test_h5netcdf.py::test_Netcdf4Dimid PASSED [ 37%] 335s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[True] PASSED [ 38%] 335s tests/test_h5netcdf.py::test_reading_str_array_from_netCDF4[False] PASSED [ 39%] 335s tests/test_h5netcdf.py::test_nc_properties_new[testfile.nc] PASSED [ 40%] 335s tests/test_h5netcdf.py::test_nc_properties_new[hdf5:/testfile] SKIPPED [ 41%] 335s tests/test_h5netcdf.py::test_failed_read_open_and_clean_delete PASSED [ 42%] 335s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[testfile.nc] PASSED [ 43%] 335s tests/test_h5netcdf.py::test_create_variable_matching_saved_dimension[hdf5:/testfile] SKIPPED [ 44%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_error[testfile.nc] PASSED [ 45%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_error[hdf5:/testfile] SKIPPED [ 46%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_okay[testfile.nc] PASSED [ 47%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_okay[hdf5:/testfile] SKIPPED [ 48%] 335s tests/test_h5netcdf.py::test_invalid_netcdf_overwrite_valid PASSED [ 49%] 335s tests/test_h5netcdf.py::test_reopen_file_different_dimension_sizes PASSED [ 50%] 335s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[testfile.nc] PASSED [ 51%] 335s tests/test_h5netcdf.py::test_invalid_then_valid_no_ncproperties[hdf5:/testfile] SKIPPED [ 52%] 335s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[testfile.nc] PASSED [ 53%] 335s tests/test_h5netcdf.py::test_creating_and_resizing_unlimited_dimensions[hdf5:/testfile] SKIPPED [ 54%] 335s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[testfile.nc] PASSED [ 55%] 335s tests/test_h5netcdf.py::test_creating_variables_with_unlimited_dimensions[hdf5:/testfile] SKIPPED [ 56%] 335s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[testfile.nc] PASSED [ 57%] 335s tests/test_h5netcdf.py::test_writing_to_an_unlimited_dimension[hdf5:/testfile] SKIPPED [ 58%] 335s tests/test_h5netcdf.py::test_c_api_can_read_unlimited_dimensions PASSED [ 59%] 335s tests/test_h5netcdf.py::test_reading_unlimited_dimensions_created_with_c_api PASSED [ 60%] 335s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[testfile.nc] PASSED [ 61%] 335s tests/test_h5netcdf.py::test_reading_unused_unlimited_dimension[hdf5:/testfile] SKIPPED [ 62%] 335s tests/test_h5netcdf.py::test_reading_special_datatype_created_with_c_api PASSED [ 63%] 335s tests/test_h5netcdf.py::test_nc4_non_coord PASSED [ 64%] 335s tests/test_h5netcdf.py::test_overwrite_existing_file PASSED [ 65%] 335s tests/test_h5netcdf.py::test_scales_on_append PASSED [ 66%] 335s tests/test_h5netcdf.py::test_create_attach_scales_netcdf4 PASSED [ 67%] 336s tests/test_h5netcdf.py::test_create_attach_scales_legacyapi PASSED [ 68%] 336s tests/test_h5netcdf.py::test_detach_scale PASSED [ 69%] 336s tests/test_h5netcdf.py::test_is_scale PASSED [ 70%] 336s tests/test_h5netcdf.py::test_get_dim_scale_refs PASSED [ 71%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix0] PASSED [ 72%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix1] PASSED [ 73%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix2] PASSED [ 74%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix3] PASSED [ 75%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix4] PASSED [ 76%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix5] PASSED [ 77%] 336s tests/test_h5netcdf.py::test_dimensions[read_write_matrix6] PASSED [ 78%] 337s tests/test_h5netcdf.py::test_dimensions[read_write_matrix7] PASSED [ 79%] 337s tests/test_h5netcdf.py::test_dimensions[read_write_matrix8] PASSED [ 80%] 337s tests/test_h5netcdf.py::test_no_circular_references PASSED [ 81%] 337s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[netCDF4] PASSED [ 82%] 337s tests/test_h5netcdf.py::test_expanded_variables_netcdf4[h5netcdf.legacyapi] PASSED [ 83%] 337s tests/test_h5netcdf.py::test_creation_with_h5netcdf_edit_with_netcdf4 PASSED [ 84%] 337s tests/test_h5netcdf.py::test_track_order_specification PASSED [ 85%] 337s tests/test_h5netcdf.py::test_more_than_7_attr_creation PASSED [ 86%] 337s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[False] PASSED [ 87%] 337s tests/test_h5netcdf.py::test_more_than_7_attr_creation_track_order[True] PASSED [ 88%] 337s tests/test_h5netcdf.py::test_group_names PASSED [ 89%] 337s tests/test_h5netcdf.py::test_legacyapi_endianess PASSED [ 90%] 337s tests/test_h5netcdf.py::test_bool_slicing_length_one_dim PASSED [ 91%] 337s tests/test_h5netcdf.py::test_fancy_indexing PASSED [ 92%] 337s tests/test_h5netcdf.py::test_h5py_chunking PASSED [ 93%] 337s tests/test_h5netcdf.py::test_h5netcdf_chunking PASSED [ 94%] 337s tests/test_h5netcdf.py::test_create_invalid_netcdf_catch_error PASSED [ 95%] 337s tests/test_h5netcdf.py::test_dimensions_in_parent_groups PASSED [ 96%] 337s tests/test_h5netcdf.py::test_array_attributes PASSED [ 97%] 337s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[True] PASSED [ 98%] 338s tests/test_h5netcdf.py::test_vlen_string_dataset_fillvalue[False] PASSED [ 99%] 375s tests/test_h5netcdf.py::test_ros3 PASSED [100%] 375s 375s ======================= 79 passed, 22 skipped in 42.29s ======================== 376s autopkgtest [15:16:04]: test command1: -----------------------] 376s autopkgtest [15:16:04]: test command1: - - - - - - - - - - results - - - - - - - - - - 376s command1 PASS 377s autopkgtest [15:16:05]: @@@@@@@@@@@@@@@@@@@@ summary 377s command1 PASS 442s Creating nova instance adt-noble-s390x-python-h5netcdf-20240323-150948-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID a4b1c77c-a35e-4d28-a8d9-902a1febb465)...