0s autopkgtest [23:37:13]: starting date and time: 2024-03-16 23:37:13+0000 0s autopkgtest [23:37:13]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [23:37:13]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.pqpfj2kz/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:netcdf,src:curl,src:gnutls28,src:hdf5,src:libpsl,src:nettle,src:openssl,src:orthanc-python --apt-upgrade pymol --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=netcdf/1:4.9.2-5ubuntu3 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 hdf5/1.10.10+repack-3.1ubuntu3 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-12.secgroup --name adt-noble-s390x-pymol-20240316-233713-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 150s autopkgtest [23:39:43]: testbed dpkg architecture: s390x 150s autopkgtest [23:39:43]: testbed apt version: 2.7.12 150s autopkgtest [23:39:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup 151s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 151s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 151s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3705 kB] 152s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 152s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 152s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [631 kB] 152s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 152s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 152s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 152s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3771 kB] 152s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 152s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.4 kB] 152s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 155s Fetched 8802 kB in 3s (2742 kB/s) 155s Reading package lists... 158s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s Calculating upgrade... 160s The following packages will be REMOVED: 160s libssl3 160s The following NEW packages will be installed: 160s libssl3t64 160s The following packages have been kept back: 160s curl 160s The following packages will be upgraded: 160s openssl 160s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 160s Need to get 2658 kB of archives. 160s After this operation, 23.6 kB of additional disk space will be used. 160s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 160s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 161s Fetched 2658 kB in 1s (3772 kB/s) 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 161s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 161s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 161s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 161s wget depends on libssl3 (>= 3.0.0). 161s tnftp depends on libssl3 (>= 3.0.0). 161s tcpdump depends on libssl3 (>= 3.0.0). 161s systemd-resolved depends on libssl3 (>= 3.0.0). 161s systemd depends on libssl3 (>= 3.0.0). 161s sudo depends on libssl3 (>= 3.0.0). 161s s390-tools depends on libssl3 (>= 3.0.0). 161s rsync depends on libssl3 (>= 3.0.0). 161s python3-cryptography depends on libssl3 (>= 3.0.0). 161s openssh-server depends on libssl3 (>= 3.0.10). 161s openssh-client depends on libssl3 (>= 3.0.10). 161s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 161s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 161s libssh-4:s390x depends on libssl3 (>= 3.0.0). 161s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 161s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 161s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 161s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 161s libnvme1 depends on libssl3 (>= 3.0.0). 161s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 161s libkmod2:s390x depends on libssl3 (>= 3.0.0). 161s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 161s libcurl4:s390x depends on libssl3 (>= 3.0.0). 161s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 161s kmod depends on libssl3 (>= 3.0.0). 161s dhcpcd-base depends on libssl3 (>= 3.0.0). 161s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 161s 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 161s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 161s Selecting previously unselected package libssl3t64:s390x. 161s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 161s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 161s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 161s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 161s Setting up openssl (3.0.13-0ubuntu1) ... 161s Processing triggers for man-db (2.12.0-3) ... 162s Processing triggers for libc-bin (2.39-0ubuntu2) ... 163s Reading package lists... 163s Building dependency tree... 163s Reading state information... 163s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 164s Unknown architecture, assuming PC-style ttyS0 164s sh: Attempting to set up Debian/Ubuntu apt sources automatically 164s sh: Distribution appears to be Ubuntu 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 166s eatmydata is already the newest version (131-1). 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s dbus is already the newest version (1.14.10-4ubuntu1). 166s dbus set to manually installed. 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Reading package lists... 167s Building dependency tree... 167s Reading state information... 167s rng-tools-debian is already the newest version (2.4). 167s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 167s Reading package lists... 167s Building dependency tree... 167s Reading state information... 167s The following packages will be REMOVED: 167s cloud-init* python3-configobj* python3-debconf* 168s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 168s After this operation, 3252 kB disk space will be freed. 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 168s Removing cloud-init (24.1.1-0ubuntu1) ... 169s Removing python3-configobj (5.0.8-3) ... 169s Removing python3-debconf (1.5.86) ... 169s Processing triggers for man-db (2.12.0-3) ... 169s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51784 files and directories currently installed.) 169s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 170s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 170s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 170s invoke-rc.d: policy-rc.d denied execution of try-restart. 171s Reading package lists... 171s Building dependency tree... 171s Reading state information... 171s linux-generic is already the newest version (6.8.0-11.11+1). 171s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 172s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 172s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 172s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 174s Reading package lists... 174s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Calculating upgrade... 176s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s Reading package lists... 176s Building dependency tree... 176s Reading state information... 176s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 176s autopkgtest [23:40:09]: rebooting testbed after setup commands that affected boot 194s autopkgtest [23:40:27]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 196s autopkgtest [23:40:29]: @@@@@@@@@@@@@@@@@@@@ apt-source pymol 200s Get:1 http://ftpmaster.internal/ubuntu noble/universe pymol 2.5.0+dfsg-1build4 (dsc) [2317 B] 200s Get:2 http://ftpmaster.internal/ubuntu noble/universe pymol 2.5.0+dfsg-1build4 (tar) [6897 kB] 200s Get:3 http://ftpmaster.internal/ubuntu noble/universe pymol 2.5.0+dfsg-1build4 (diff) [57.4 kB] 201s gpgv: Signature made Thu Nov 2 08:51:36 2023 UTC 201s gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 201s gpgv: issuer "doko@ubuntu.com" 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./pymol_2.5.0+dfsg-1build4.dsc: no acceptable signature found 202s autopkgtest [23:40:35]: testing package pymol version 2.5.0+dfsg-1build4 202s autopkgtest [23:40:35]: build not needed 209s autopkgtest [23:40:42]: test command1: preparing testbed 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 211s Starting pkgProblemResolver with broken count: 0 211s Starting 2 pkgProblemResolver with broken count: 0 211s Done 211s The following additional packages will be installed: 211s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libaec0 211s libavahi-client3 libavahi-common-data libavahi-common3 libblas3 libcups2 211s libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 211s libegl-mesa0 libegl1 libfontconfig1 libfreetype6 libgbm1 libgfortran5 libgl1 211s libgl1-mesa-dri libglapi-mesa libglew2.2 libglu1-mesa libglvnd0 libglx-mesa0 211s libglx0 libgomp1 libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 211s libice6 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 liblapack3 libllvm17 211s libmd4c0 libmtdev1 libnetcdf19 libopengl0 libpcre2-16-0 libpython3.12 211s libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 211s libqt5network5 libqt5opengl5 libqt5printsupport5 libqt5sql5 libqt5test5 211s libqt5widgets5 libqt5xml5 libsm6 libsz2 libvulkan1 libwacom-common libwacom9 211s libwayland-client0 libwayland-server0 libx11-xcb1 libxcb-dri2-0 211s libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 211s libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 211s libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 211s libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxfixes3 libxkbcommon-x11-0 211s libxrender1 libxshmfence1 libxxf86vm1 pymol pymol-data python3-numpy 211s python3-opengl python3-pymol python3-pyqt5 python3-pyqt5.qtopengl 211s python3-pyqt5.sip x11-common 211s Suggested packages: 211s cups-common glew-utils libthai0 qgnomeplatform-qt5 qt5-image-formats-plugins 211s libwacom-bin gcc gfortran python3-dev python3-pytest libgle3 python3-tk 211s Recommended packages: 211s libgl1-amber-dri qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme 211s qtwayland5 libqt5sql5-sqlite | libqt5sql5-mysql | libqt5sql5-odbc 211s | libqt5sql5-psql | libqt5sql5-tds | libqt5sql5-ibase mesa-vulkan-drivers 211s | vulkan-icd apbs libglut-dev 211s The following NEW packages will be installed: 211s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 211s fonts-dejavu-mono libaec0 libavahi-client3 libavahi-common-data 211s libavahi-common3 libblas3 libcups2 libdouble-conversion3 libdrm-amdgpu1 211s libdrm-nouveau2 libdrm-radeon1 libegl-mesa0 libegl1 libfontconfig1 211s libfreetype6 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa 211s libglew2.2 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgomp1 211s libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 211s libinput-bin libinput10 libjpeg-turbo8 libjpeg8 liblapack3 libllvm17 211s libmd4c0 libmtdev1 libnetcdf19 libopengl0 libpcre2-16-0 libpython3.12 211s libqt5core5a libqt5dbus5 libqt5designer5 libqt5gui5 libqt5help5 211s libqt5network5 libqt5opengl5 libqt5printsupport5 libqt5sql5 libqt5test5 211s libqt5widgets5 libqt5xml5 libsm6 libsz2 libvulkan1 libwacom-common libwacom9 211s libwayland-client0 libwayland-server0 libx11-xcb1 libxcb-dri2-0 211s libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 211s libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 211s libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 211s libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxfixes3 libxkbcommon-x11-0 211s libxrender1 libxshmfence1 libxxf86vm1 pymol pymol-data python3-numpy 211s python3-opengl python3-pymol python3-pyqt5 python3-pyqt5.qtopengl 211s python3-pyqt5.sip x11-common 211s 0 upgraded, 99 newly installed, 0 to remove and 0 not upgraded. 211s Need to get 84.8 MB/84.8 MB of archives. 211s After this operation, 364 MB of additional disk space will be used. 211s Get:1 /tmp/autopkgtest.72SPmY/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 212s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 212s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 212s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 212s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 212s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 212s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig s390x 2.15.0-1ubuntu1 [191 kB] 212s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] 212s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libavahi-common-data s390x 0.8-13ubuntu2 [29.5 kB] 212s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libavahi-common3 s390x 0.8-13ubuntu2 [23.8 kB] 212s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libavahi-client3 s390x 0.8-13ubuntu2 [26.7 kB] 212s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 212s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libcups2 s390x 2.4.6-0ubuntu3 [277 kB] 212s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x libdouble-conversion3 s390x 3.3.0-1 [39.6 kB] 212s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-amdgpu1 s390x 2.4.120-2 [21.1 kB] 212s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-nouveau2 s390x 2.4.120-2 [18.5 kB] 212s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-radeon1 s390x 2.4.120-2 [22.7 kB] 212s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-server0 s390x 1.22.0-2.1 [34.9 kB] 212s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-randr0 s390x 1.15-1 [19.0 kB] 212s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libgbm1 s390x 24.0.1-1ubuntu1 [44.0 kB] 212s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libglapi-mesa s390x 24.0.1-1ubuntu1 [68.7 kB] 212s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libwayland-client0 s390x 1.22.0-2.1 [26.1 kB] 212s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libx11-xcb1 s390x 2:1.8.7-1 [7778 B] 212s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri2-0 s390x 1.15-1 [7426 B] 213s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri3-0 s390x 1.15-1 [7270 B] 213s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-present0 s390x 1.15-1 [5752 B] 213s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-sync1 s390x 1.15-1 [9392 B] 213s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xfixes0 s390x 1.15-1 [10.5 kB] 213s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libxshmfence1 s390x 1.3-1build4 [5334 B] 213s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libegl-mesa0 s390x 24.0.1-1ubuntu1 [123 kB] 213s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 213s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libvulkan1 s390x 1.3.275.0-1 [155 kB] 213s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libllvm17 s390x 1:17.0.6-5build1 [31.2 MB] 214s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libgl1-mesa-dri s390x 24.0.1-1ubuntu1 [7184 kB] 214s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libglvnd0 s390x 1.7.0-1 [106 kB] 214s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-glx0 s390x 1.15-1 [25.8 kB] 214s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 214s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libxfixes3 s390x 1:6.0.0-2 [10.6 kB] 214s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libxxf86vm1 s390x 1:1.1.4-1build3 [9900 B] 214s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libglx-mesa0 s390x 24.0.1-1ubuntu1 [182 kB] 214s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x libglx0 s390x 1.7.0-1 [31.4 kB] 214s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libgl1 s390x 1.7.0-1 [137 kB] 214s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x libglew2.2 s390x 2.2.0-4 [202 kB] 214s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 214s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libgraphite2-3 s390x 1.3.14-2 [90.4 kB] 214s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libharfbuzz0b s390x 8.3.0-2 [515 kB] 214s Get:47 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] 214s Get:48 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-103-1 s390x 1.10.10+repack-3ubuntu1 [1425 kB] 214s Get:49 http://ftpmaster.internal/ubuntu noble/universe s390x libhdf5-hl-100 s390x 1.10.10+repack-3ubuntu1 [57.5 kB] 214s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 214s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB] 214s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libwacom-common all 2.10.0-1 [63.3 kB] 214s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libwacom9 s390x 2.10.0-1 [24.2 kB] 214s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libinput-bin s390x 1.25.0-1 [22.0 kB] 214s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libmtdev1 s390x 1.1.6-1build4 [14.6 kB] 214s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x libinput10 s390x 1.25.0-1 [136 kB] 214s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 214s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 214s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 214s Get:60 http://ftpmaster.internal/ubuntu noble/universe s390x libmd4c0 s390x 0.4.8-1 [43.6 kB] 214s Get:61 http://ftpmaster.internal/ubuntu noble/universe s390x libnetcdf19 s390x 1:4.9.2-3ubuntu1 [506 kB] 214s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libpcre2-16-0 s390x 10.42-4ubuntu1 [229 kB] 214s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libpython3.12 s390x 3.12.2-1 [2561 kB] 214s Get:64 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5core5a s390x 5.15.12+dfsg-3ubuntu1 [2258 kB] 214s Get:65 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5dbus5 s390x 5.15.12+dfsg-3ubuntu1 [244 kB] 214s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libegl1 s390x 1.7.0-1 [30.9 kB] 214s Get:67 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5network5 s390x 5.15.12+dfsg-3ubuntu1 [798 kB] 214s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB] 214s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-icccm4 s390x 0.4.1-1.1build2 [11.5 kB] 214s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-util1 s390x 0.4.0-1build2 [11.2 kB] 214s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-image0 s390x 0.4.0-2 [11.8 kB] 214s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-keysyms1 s390x 0.4.0-1build3 [8780 B] 214s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 214s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render-util0 s390x 0.3.9-1build3 [10.1 kB] 214s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shape0 s390x 1.15-1 [6146 B] 214s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xinerama0 s390x 1.15-1 [5382 B] 214s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xinput0 s390x 1.15-1 [34.6 kB] 214s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xkb1 s390x 1.15-1 [32.3 kB] 214s Get:79 http://ftpmaster.internal/ubuntu noble/main s390x libxkbcommon-x11-0 s390x 1.6.0-1 [14.8 kB] 214s Get:80 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 214s Get:81 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5gui5 s390x 5.15.12+dfsg-3ubuntu1 [4203 kB] 215s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5widgets5 s390x 5.15.12+dfsg-3ubuntu1 [2753 kB] 215s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5xml5 s390x 5.15.12+dfsg-3ubuntu1 [132 kB] 215s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5designer5 s390x 5.15.12-2 [2912 kB] 215s Get:85 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5sql5 s390x 5.15.12+dfsg-3ubuntu1 [132 kB] 215s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5help5 s390x 5.15.12-2 [174 kB] 215s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5opengl5 s390x 5.15.12+dfsg-3ubuntu1 [157 kB] 215s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5printsupport5 s390x 5.15.12+dfsg-3ubuntu1 [220 kB] 215s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x libqt5test5 s390x 5.15.12+dfsg-3ubuntu1 [156 kB] 215s Get:90 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-2 [5137 kB] 215s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libopengl0 s390x 1.7.0-1 [45.9 kB] 215s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libglu1-mesa s390x 9.0.2-1.1 [145 kB] 215s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x python3-opengl all 3.1.7+dfsg-1 [612 kB] 215s Get:94 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pyqt5.sip s390x 12.13.0-1build1 [91.8 kB] 215s Get:95 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pyqt5 s390x 5.15.10+dfsg-1build2 [2905 kB] 215s Get:96 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pyqt5.qtopengl s390x 5.15.10+dfsg-1build2 [140 kB] 215s Get:97 http://ftpmaster.internal/ubuntu noble/universe s390x pymol-data all 2.5.0+dfsg-1build4 [1353 kB] 215s Get:98 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pymol s390x 2.5.0+dfsg-1build4 [7702 kB] 215s Get:99 http://ftpmaster.internal/ubuntu noble/universe s390x pymol all 2.5.0+dfsg-1build4 [126 kB] 216s Fetched 84.8 MB in 4s (22.0 MB/s) 216s Selecting previously unselected package libfreetype6:s390x. 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51729 files and directories currently installed.) 216s Preparing to unpack .../00-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 216s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 216s Selecting previously unselected package fonts-dejavu-mono. 216s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 216s Unpacking fonts-dejavu-mono (2.37-8) ... 216s Selecting previously unselected package fonts-dejavu-core. 216s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 216s Unpacking fonts-dejavu-core (2.37-8) ... 216s Selecting previously unselected package fontconfig-config. 216s Preparing to unpack .../03-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 216s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 216s Selecting previously unselected package libfontconfig1:s390x. 216s Preparing to unpack .../04-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 216s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 216s Selecting previously unselected package fontconfig. 216s Preparing to unpack .../05-fontconfig_2.15.0-1ubuntu1_s390x.deb ... 216s Unpacking fontconfig (2.15.0-1ubuntu1) ... 216s Selecting previously unselected package libaec0:s390x. 216s Preparing to unpack .../06-libaec0_1.1.2-1_s390x.deb ... 216s Unpacking libaec0:s390x (1.1.2-1) ... 216s Selecting previously unselected package libavahi-common-data:s390x. 216s Preparing to unpack .../07-libavahi-common-data_0.8-13ubuntu2_s390x.deb ... 216s Unpacking libavahi-common-data:s390x (0.8-13ubuntu2) ... 216s Selecting previously unselected package libavahi-common3:s390x. 216s Preparing to unpack .../08-libavahi-common3_0.8-13ubuntu2_s390x.deb ... 216s Unpacking libavahi-common3:s390x (0.8-13ubuntu2) ... 216s Selecting previously unselected package libavahi-client3:s390x. 216s Preparing to unpack .../09-libavahi-client3_0.8-13ubuntu2_s390x.deb ... 216s Unpacking libavahi-client3:s390x (0.8-13ubuntu2) ... 216s Selecting previously unselected package libblas3:s390x. 216s Preparing to unpack .../10-libblas3_3.12.0-3_s390x.deb ... 216s Unpacking libblas3:s390x (3.12.0-3) ... 216s Selecting previously unselected package libcups2:s390x. 216s Preparing to unpack .../11-libcups2_2.4.6-0ubuntu3_s390x.deb ... 216s Unpacking libcups2:s390x (2.4.6-0ubuntu3) ... 217s Selecting previously unselected package libdouble-conversion3:s390x. 217s Preparing to unpack .../12-libdouble-conversion3_3.3.0-1_s390x.deb ... 217s Unpacking libdouble-conversion3:s390x (3.3.0-1) ... 217s Selecting previously unselected package libdrm-amdgpu1:s390x. 217s Preparing to unpack .../13-libdrm-amdgpu1_2.4.120-2_s390x.deb ... 217s Unpacking libdrm-amdgpu1:s390x (2.4.120-2) ... 217s Selecting previously unselected package libdrm-nouveau2:s390x. 217s Preparing to unpack .../14-libdrm-nouveau2_2.4.120-2_s390x.deb ... 217s Unpacking libdrm-nouveau2:s390x (2.4.120-2) ... 217s Selecting previously unselected package libdrm-radeon1:s390x. 217s Preparing to unpack .../15-libdrm-radeon1_2.4.120-2_s390x.deb ... 217s Unpacking libdrm-radeon1:s390x (2.4.120-2) ... 217s Selecting previously unselected package libwayland-server0:s390x. 217s Preparing to unpack .../16-libwayland-server0_1.22.0-2.1_s390x.deb ... 217s Unpacking libwayland-server0:s390x (1.22.0-2.1) ... 217s Selecting previously unselected package libxcb-randr0:s390x. 217s Preparing to unpack .../17-libxcb-randr0_1.15-1_s390x.deb ... 217s Unpacking libxcb-randr0:s390x (1.15-1) ... 217s Selecting previously unselected package libgbm1:s390x. 217s Preparing to unpack .../18-libgbm1_24.0.1-1ubuntu1_s390x.deb ... 217s Unpacking libgbm1:s390x (24.0.1-1ubuntu1) ... 217s Selecting previously unselected package libglapi-mesa:s390x. 217s Preparing to unpack .../19-libglapi-mesa_24.0.1-1ubuntu1_s390x.deb ... 217s Unpacking libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 217s Selecting previously unselected package libwayland-client0:s390x. 217s Preparing to unpack .../20-libwayland-client0_1.22.0-2.1_s390x.deb ... 217s Unpacking libwayland-client0:s390x (1.22.0-2.1) ... 217s Selecting previously unselected package libx11-xcb1:s390x. 217s Preparing to unpack .../21-libx11-xcb1_2%3a1.8.7-1_s390x.deb ... 217s Unpacking libx11-xcb1:s390x (2:1.8.7-1) ... 217s Selecting previously unselected package libxcb-dri2-0:s390x. 217s Preparing to unpack .../22-libxcb-dri2-0_1.15-1_s390x.deb ... 217s Unpacking libxcb-dri2-0:s390x (1.15-1) ... 217s Selecting previously unselected package libxcb-dri3-0:s390x. 217s Preparing to unpack .../23-libxcb-dri3-0_1.15-1_s390x.deb ... 217s Unpacking libxcb-dri3-0:s390x (1.15-1) ... 217s Selecting previously unselected package libxcb-present0:s390x. 217s Preparing to unpack .../24-libxcb-present0_1.15-1_s390x.deb ... 217s Unpacking libxcb-present0:s390x (1.15-1) ... 217s Selecting previously unselected package libxcb-sync1:s390x. 217s Preparing to unpack .../25-libxcb-sync1_1.15-1_s390x.deb ... 217s Unpacking libxcb-sync1:s390x (1.15-1) ... 217s Selecting previously unselected package libxcb-xfixes0:s390x. 217s Preparing to unpack .../26-libxcb-xfixes0_1.15-1_s390x.deb ... 217s Unpacking libxcb-xfixes0:s390x (1.15-1) ... 217s Selecting previously unselected package libxshmfence1:s390x. 217s Preparing to unpack .../27-libxshmfence1_1.3-1build4_s390x.deb ... 217s Unpacking libxshmfence1:s390x (1.3-1build4) ... 217s Selecting previously unselected package libegl-mesa0:s390x. 217s Preparing to unpack .../28-libegl-mesa0_24.0.1-1ubuntu1_s390x.deb ... 217s Unpacking libegl-mesa0:s390x (24.0.1-1ubuntu1) ... 217s Selecting previously unselected package libgfortran5:s390x. 217s Preparing to unpack .../29-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 217s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 217s Selecting previously unselected package libvulkan1:s390x. 217s Preparing to unpack .../30-libvulkan1_1.3.275.0-1_s390x.deb ... 217s Unpacking libvulkan1:s390x (1.3.275.0-1) ... 217s Selecting previously unselected package libllvm17:s390x. 217s Preparing to unpack .../31-libllvm17_1%3a17.0.6-5build1_s390x.deb ... 217s Unpacking libllvm17:s390x (1:17.0.6-5build1) ... 219s Selecting previously unselected package libgl1-mesa-dri:s390x. 219s Preparing to unpack .../32-libgl1-mesa-dri_24.0.1-1ubuntu1_s390x.deb ... 219s Unpacking libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 219s Selecting previously unselected package libglvnd0:s390x. 219s Preparing to unpack .../33-libglvnd0_1.7.0-1_s390x.deb ... 219s Unpacking libglvnd0:s390x (1.7.0-1) ... 219s Selecting previously unselected package libxcb-glx0:s390x. 219s Preparing to unpack .../34-libxcb-glx0_1.15-1_s390x.deb ... 219s Unpacking libxcb-glx0:s390x (1.15-1) ... 219s Selecting previously unselected package libxcb-shm0:s390x. 219s Preparing to unpack .../35-libxcb-shm0_1.15-1_s390x.deb ... 219s Unpacking libxcb-shm0:s390x (1.15-1) ... 219s Selecting previously unselected package libxfixes3:s390x. 219s Preparing to unpack .../36-libxfixes3_1%3a6.0.0-2_s390x.deb ... 219s Unpacking libxfixes3:s390x (1:6.0.0-2) ... 219s Selecting previously unselected package libxxf86vm1:s390x. 219s Preparing to unpack .../37-libxxf86vm1_1%3a1.1.4-1build3_s390x.deb ... 219s Unpacking libxxf86vm1:s390x (1:1.1.4-1build3) ... 219s Selecting previously unselected package libglx-mesa0:s390x. 219s Preparing to unpack .../38-libglx-mesa0_24.0.1-1ubuntu1_s390x.deb ... 219s Unpacking libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 219s Selecting previously unselected package libglx0:s390x. 219s Preparing to unpack .../39-libglx0_1.7.0-1_s390x.deb ... 219s Unpacking libglx0:s390x (1.7.0-1) ... 219s Selecting previously unselected package libgl1:s390x. 219s Preparing to unpack .../40-libgl1_1.7.0-1_s390x.deb ... 219s Unpacking libgl1:s390x (1.7.0-1) ... 219s Selecting previously unselected package libglew2.2:s390x. 219s Preparing to unpack .../41-libglew2.2_2.2.0-4_s390x.deb ... 219s Unpacking libglew2.2:s390x (2.2.0-4) ... 219s Selecting previously unselected package libgomp1:s390x. 219s Preparing to unpack .../42-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 219s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 219s Selecting previously unselected package libgraphite2-3:s390x. 219s Preparing to unpack .../43-libgraphite2-3_1.3.14-2_s390x.deb ... 219s Unpacking libgraphite2-3:s390x (1.3.14-2) ... 219s Selecting previously unselected package libharfbuzz0b:s390x. 219s Preparing to unpack .../44-libharfbuzz0b_8.3.0-2_s390x.deb ... 219s Unpacking libharfbuzz0b:s390x (8.3.0-2) ... 219s Selecting previously unselected package libsz2:s390x. 219s Preparing to unpack .../45-libsz2_1.1.2-1_s390x.deb ... 219s Unpacking libsz2:s390x (1.1.2-1) ... 219s Selecting previously unselected package libhdf5-103-1:s390x. 219s Preparing to unpack .../46-libhdf5-103-1_1.10.10+repack-3ubuntu1_s390x.deb ... 219s Unpacking libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 219s Selecting previously unselected package libhdf5-hl-100:s390x. 219s Preparing to unpack .../47-libhdf5-hl-100_1.10.10+repack-3ubuntu1_s390x.deb ... 219s Unpacking libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 219s Selecting previously unselected package x11-common. 219s Preparing to unpack .../48-x11-common_1%3a7.7+23ubuntu2_all.deb ... 219s Unpacking x11-common (1:7.7+23ubuntu2) ... 219s Selecting previously unselected package libice6:s390x. 219s Preparing to unpack .../49-libice6_2%3a1.0.10-1build2_s390x.deb ... 219s Unpacking libice6:s390x (2:1.0.10-1build2) ... 219s Selecting previously unselected package libwacom-common. 219s Preparing to unpack .../50-libwacom-common_2.10.0-1_all.deb ... 219s Unpacking libwacom-common (2.10.0-1) ... 220s Selecting previously unselected package libwacom9:s390x. 220s Preparing to unpack .../51-libwacom9_2.10.0-1_s390x.deb ... 220s Unpacking libwacom9:s390x (2.10.0-1) ... 220s Selecting previously unselected package libinput-bin. 220s Preparing to unpack .../52-libinput-bin_1.25.0-1_s390x.deb ... 220s Unpacking libinput-bin (1.25.0-1) ... 220s Selecting previously unselected package libmtdev1:s390x. 220s Preparing to unpack .../53-libmtdev1_1.1.6-1build4_s390x.deb ... 220s Unpacking libmtdev1:s390x (1.1.6-1build4) ... 220s Selecting previously unselected package libinput10:s390x. 220s Preparing to unpack .../54-libinput10_1.25.0-1_s390x.deb ... 220s Unpacking libinput10:s390x (1.25.0-1) ... 220s Selecting previously unselected package libjpeg-turbo8:s390x. 220s Preparing to unpack .../55-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 220s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 220s Selecting previously unselected package libjpeg8:s390x. 220s Preparing to unpack .../56-libjpeg8_8c-2ubuntu11_s390x.deb ... 220s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 220s Selecting previously unselected package liblapack3:s390x. 220s Preparing to unpack .../57-liblapack3_3.12.0-3_s390x.deb ... 220s Unpacking liblapack3:s390x (3.12.0-3) ... 220s Selecting previously unselected package libmd4c0:s390x. 220s Preparing to unpack .../58-libmd4c0_0.4.8-1_s390x.deb ... 220s Unpacking libmd4c0:s390x (0.4.8-1) ... 220s Selecting previously unselected package libnetcdf19:s390x. 220s Preparing to unpack .../59-libnetcdf19_1%3a4.9.2-3ubuntu1_s390x.deb ... 220s Unpacking libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 220s Selecting previously unselected package libpcre2-16-0:s390x. 220s Preparing to unpack .../60-libpcre2-16-0_10.42-4ubuntu1_s390x.deb ... 220s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu1) ... 220s Selecting previously unselected package libpython3.12:s390x. 220s Preparing to unpack .../61-libpython3.12_3.12.2-1_s390x.deb ... 220s Unpacking libpython3.12:s390x (3.12.2-1) ... 220s Selecting previously unselected package libqt5core5a:s390x. 220s Preparing to unpack .../62-libqt5core5a_5.15.12+dfsg-3ubuntu1_s390x.deb ... 220s Unpacking libqt5core5a:s390x (5.15.12+dfsg-3ubuntu1) ... 220s Selecting previously unselected package libqt5dbus5:s390x. 220s Preparing to unpack .../63-libqt5dbus5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 220s Unpacking libqt5dbus5:s390x (5.15.12+dfsg-3ubuntu1) ... 220s Selecting previously unselected package libegl1:s390x. 220s Preparing to unpack .../64-libegl1_1.7.0-1_s390x.deb ... 220s Unpacking libegl1:s390x (1.7.0-1) ... 220s Selecting previously unselected package libqt5network5:s390x. 220s Preparing to unpack .../65-libqt5network5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 220s Unpacking libqt5network5:s390x (5.15.12+dfsg-3ubuntu1) ... 220s Selecting previously unselected package libsm6:s390x. 220s Preparing to unpack .../66-libsm6_2%3a1.2.3-1build2_s390x.deb ... 220s Unpacking libsm6:s390x (2:1.2.3-1build2) ... 220s Selecting previously unselected package libxcb-icccm4:s390x. 220s Preparing to unpack .../67-libxcb-icccm4_0.4.1-1.1build2_s390x.deb ... 220s Unpacking libxcb-icccm4:s390x (0.4.1-1.1build2) ... 220s Selecting previously unselected package libxcb-util1:s390x. 220s Preparing to unpack .../68-libxcb-util1_0.4.0-1build2_s390x.deb ... 220s Unpacking libxcb-util1:s390x (0.4.0-1build2) ... 220s Selecting previously unselected package libxcb-image0:s390x. 220s Preparing to unpack .../69-libxcb-image0_0.4.0-2_s390x.deb ... 220s Unpacking libxcb-image0:s390x (0.4.0-2) ... 220s Selecting previously unselected package libxcb-keysyms1:s390x. 220s Preparing to unpack .../70-libxcb-keysyms1_0.4.0-1build3_s390x.deb ... 220s Unpacking libxcb-keysyms1:s390x (0.4.0-1build3) ... 220s Selecting previously unselected package libxcb-render0:s390x. 220s Preparing to unpack .../71-libxcb-render0_1.15-1_s390x.deb ... 220s Unpacking libxcb-render0:s390x (1.15-1) ... 220s Selecting previously unselected package libxcb-render-util0:s390x. 220s Preparing to unpack .../72-libxcb-render-util0_0.3.9-1build3_s390x.deb ... 220s Unpacking libxcb-render-util0:s390x (0.3.9-1build3) ... 220s Selecting previously unselected package libxcb-shape0:s390x. 220s Preparing to unpack .../73-libxcb-shape0_1.15-1_s390x.deb ... 220s Unpacking libxcb-shape0:s390x (1.15-1) ... 221s Selecting previously unselected package libxcb-xinerama0:s390x. 221s Preparing to unpack .../74-libxcb-xinerama0_1.15-1_s390x.deb ... 221s Unpacking libxcb-xinerama0:s390x (1.15-1) ... 221s Selecting previously unselected package libxcb-xinput0:s390x. 221s Preparing to unpack .../75-libxcb-xinput0_1.15-1_s390x.deb ... 221s Unpacking libxcb-xinput0:s390x (1.15-1) ... 221s Selecting previously unselected package libxcb-xkb1:s390x. 221s Preparing to unpack .../76-libxcb-xkb1_1.15-1_s390x.deb ... 221s Unpacking libxcb-xkb1:s390x (1.15-1) ... 221s Selecting previously unselected package libxkbcommon-x11-0:s390x. 221s Preparing to unpack .../77-libxkbcommon-x11-0_1.6.0-1_s390x.deb ... 221s Unpacking libxkbcommon-x11-0:s390x (1.6.0-1) ... 221s Selecting previously unselected package libxrender1:s390x. 221s Preparing to unpack .../78-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 221s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 221s Selecting previously unselected package libqt5gui5:s390x. 221s Preparing to unpack .../79-libqt5gui5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5gui5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5widgets5:s390x. 221s Preparing to unpack .../80-libqt5widgets5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5widgets5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5xml5:s390x. 221s Preparing to unpack .../81-libqt5xml5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5xml5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5designer5:s390x. 221s Preparing to unpack .../82-libqt5designer5_5.15.12-2_s390x.deb ... 221s Unpacking libqt5designer5:s390x (5.15.12-2) ... 221s Selecting previously unselected package libqt5sql5:s390x. 221s Preparing to unpack .../83-libqt5sql5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5sql5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5help5:s390x. 221s Preparing to unpack .../84-libqt5help5_5.15.12-2_s390x.deb ... 221s Unpacking libqt5help5:s390x (5.15.12-2) ... 221s Selecting previously unselected package libqt5opengl5:s390x. 221s Preparing to unpack .../85-libqt5opengl5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5opengl5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5printsupport5:s390x. 221s Preparing to unpack .../86-libqt5printsupport5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5printsupport5:s390x (5.15.12+dfsg-3ubuntu1) ... 221s Selecting previously unselected package libqt5test5:s390x. 221s Preparing to unpack .../87-libqt5test5_5.15.12+dfsg-3ubuntu1_s390x.deb ... 221s Unpacking libqt5test5:s390x (5.15.12+dfsg-3ubuntu1) ... 222s Selecting previously unselected package python3-numpy. 222s Preparing to unpack .../88-python3-numpy_1%3a1.24.2-2_s390x.deb ... 222s Unpacking python3-numpy (1:1.24.2-2) ... 222s Selecting previously unselected package libopengl0:s390x. 222s Preparing to unpack .../89-libopengl0_1.7.0-1_s390x.deb ... 222s Unpacking libopengl0:s390x (1.7.0-1) ... 222s Selecting previously unselected package libglu1-mesa:s390x. 222s Preparing to unpack .../90-libglu1-mesa_9.0.2-1.1_s390x.deb ... 222s Unpacking libglu1-mesa:s390x (9.0.2-1.1) ... 222s Selecting previously unselected package python3-opengl. 222s Preparing to unpack .../91-python3-opengl_3.1.7+dfsg-1_all.deb ... 222s Unpacking python3-opengl (3.1.7+dfsg-1) ... 223s Selecting previously unselected package python3-pyqt5.sip. 223s Preparing to unpack .../92-python3-pyqt5.sip_12.13.0-1build1_s390x.deb ... 223s Unpacking python3-pyqt5.sip (12.13.0-1build1) ... 223s Selecting previously unselected package python3-pyqt5. 223s Preparing to unpack .../93-python3-pyqt5_5.15.10+dfsg-1build2_s390x.deb ... 223s Unpacking python3-pyqt5 (5.15.10+dfsg-1build2) ... 223s Selecting previously unselected package python3-pyqt5.qtopengl. 223s Preparing to unpack .../94-python3-pyqt5.qtopengl_5.15.10+dfsg-1build2_s390x.deb ... 223s Unpacking python3-pyqt5.qtopengl (5.15.10+dfsg-1build2) ... 223s Selecting previously unselected package pymol-data. 223s Preparing to unpack .../95-pymol-data_2.5.0+dfsg-1build4_all.deb ... 223s Unpacking pymol-data (2.5.0+dfsg-1build4) ... 223s Selecting previously unselected package python3-pymol. 223s Preparing to unpack .../96-python3-pymol_2.5.0+dfsg-1build4_s390x.deb ... 223s Unpacking python3-pymol (2.5.0+dfsg-1build4) ... 223s Selecting previously unselected package pymol. 223s Preparing to unpack .../97-pymol_2.5.0+dfsg-1build4_all.deb ... 223s Unpacking pymol (2.5.0+dfsg-1build4) ... 223s Selecting previously unselected package autopkgtest-satdep. 223s Preparing to unpack .../98-1-autopkgtest-satdep.deb ... 223s Unpacking autopkgtest-satdep (0) ... 223s Setting up libgraphite2-3:s390x (1.3.14-2) ... 223s Setting up libxcb-dri3-0:s390x (1.15-1) ... 223s Setting up libwayland-server0:s390x (1.22.0-2.1) ... 223s Setting up libx11-xcb1:s390x (2:1.8.7-1) ... 223s Setting up libdouble-conversion3:s390x (3.3.0-1) ... 223s Setting up libdrm-nouveau2:s390x (2.4.120-2) ... 223s Setting up libxcb-xfixes0:s390x (1.15-1) ... 223s Setting up libxcb-xinput0:s390x (1.15-1) ... 223s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 223s Setting up libxcb-render0:s390x (1.15-1) ... 223s Setting up libdrm-radeon1:s390x (2.4.120-2) ... 223s Setting up libglvnd0:s390x (1.7.0-1) ... 223s Setting up libxcb-glx0:s390x (1.15-1) ... 223s Setting up libxcb-keysyms1:s390x (0.4.0-1build3) ... 223s Setting up libxcb-shape0:s390x (1.15-1) ... 223s Setting up x11-common (1:7.7+23ubuntu2) ... 224s Setting up libxcb-render-util0:s390x (0.3.9-1build3) ... 224s Setting up libxcb-shm0:s390x (1.15-1) ... 224s Setting up libxcb-icccm4:s390x (0.4.1-1.1build2) ... 224s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ... 224s Setting up libpcre2-16-0:s390x (10.42-4ubuntu1) ... 224s Setting up libaec0:s390x (1.1.2-1) ... 224s Setting up libopengl0:s390x (1.7.0-1) ... 224s Setting up libxcb-util1:s390x (0.4.0-1build2) ... 224s Setting up libxxf86vm1:s390x (1:1.1.4-1build3) ... 224s Setting up libxcb-xkb1:s390x (1.15-1) ... 224s Setting up libxcb-image0:s390x (0.4.0-2) ... 224s Setting up libxcb-present0:s390x (1.15-1) ... 224s Setting up libblas3:s390x (3.12.0-3) ... 224s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 224s Setting up libxcb-xinerama0:s390x (1.15-1) ... 224s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ... 224s Setting up libxfixes3:s390x (1:6.0.0-2) ... 224s Setting up libxcb-sync1:s390x (1.15-1) ... 224s Setting up libavahi-common-data:s390x (0.8-13ubuntu2) ... 224s Setting up pymol-data (2.5.0+dfsg-1build4) ... 224s Setting up libxkbcommon-x11-0:s390x (1.6.0-1) ... 224s Setting up fonts-dejavu-mono (2.37-8) ... 224s Setting up fonts-dejavu-core (2.37-8) ... 224s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 224s Setting up libqt5core5a:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 224s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 224s Setting up libmtdev1:s390x (1.1.6-1build4) ... 224s Setting up libvulkan1:s390x (1.3.275.0-1) ... 224s Setting up libxcb-dri2-0:s390x (1.15-1) ... 224s Setting up python3-pyqt5.sip (12.13.0-1build1) ... 224s Setting up libxshmfence1:s390x (1.3-1build4) ... 224s Setting up libqt5dbus5:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libxcb-randr0:s390x (1.15-1) ... 224s Setting up libmd4c0:s390x (0.4.8-1) ... 224s Setting up libharfbuzz0b:s390x (8.3.0-2) ... 224s Setting up libglu1-mesa:s390x (9.0.2-1.1) ... 224s Setting up libqt5test5:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libllvm17:s390x (1:17.0.6-5build1) ... 224s Setting up libpython3.12:s390x (3.12.2-1) ... 224s Setting up libsz2:s390x (1.1.2-1) ... 224s Setting up libdrm-amdgpu1:s390x (2.4.120-2) ... 224s Setting up libwacom-common (2.10.0-1) ... 224s Setting up libwayland-client0:s390x (1.22.0-2.1) ... 224s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 224s Setting up libice6:s390x (2:1.0.10-1build2) ... 224s Setting up liblapack3:s390x (3.12.0-3) ... 224s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 224s Setting up libgbm1:s390x (24.0.1-1ubuntu1) ... 224s Setting up libwacom9:s390x (2.10.0-1) ... 224s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 224s Setting up libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 224s Setting up libavahi-common3:s390x (0.8-13ubuntu2) ... 224s Setting up libqt5network5:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libinput-bin (1.25.0-1) ... 224s Setting up libqt5sql5:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libqt5xml5:s390x (5.15.12+dfsg-3ubuntu1) ... 224s Setting up libegl-mesa0:s390x (24.0.1-1ubuntu1) ... 224s Setting up python3-numpy (1:1.24.2-2) ... 226s Setting up libhdf5-103-1:s390x (1.10.10+repack-3ubuntu1) ... 226s Setting up libegl1:s390x (1.7.0-1) ... 226s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ... 226s Setting up libsm6:s390x (2:1.2.3-1build2) ... 226s Setting up libavahi-client3:s390x (0.8-13ubuntu2) ... 226s Setting up libhdf5-hl-100:s390x (1.10.10+repack-3ubuntu1) ... 226s Setting up libinput10:s390x (1.25.0-1) ... 226s Setting up fontconfig (2.15.0-1ubuntu1) ... 228s Regenerating fonts cache... done. 228s Setting up libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 228s Setting up libglx0:s390x (1.7.0-1) ... 228s Setting up libgl1:s390x (1.7.0-1) ... 228s Setting up libglew2.2:s390x (2.2.0-4) ... 228s Setting up libcups2:s390x (2.4.6-0ubuntu3) ... 228s Setting up libnetcdf19:s390x (1:4.9.2-3ubuntu1) ... 228s Setting up libqt5gui5:s390x (5.15.12+dfsg-3ubuntu1) ... 228s Setting up libqt5widgets5:s390x (5.15.12+dfsg-3ubuntu1) ... 228s Setting up python3-opengl (3.1.7+dfsg-1) ... 229s /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' 229s '''OpenGL extension AMD.vertex_shader_tessellator 230s Setting up libqt5help5:s390x (5.15.12-2) ... 230s Setting up libqt5printsupport5:s390x (5.15.12+dfsg-3ubuntu1) ... 230s Setting up libqt5opengl5:s390x (5.15.12+dfsg-3ubuntu1) ... 230s Setting up libqt5designer5:s390x (5.15.12-2) ... 230s Setting up python3-pyqt5 (5.15.10+dfsg-1build2) ... 231s Setting up python3-pyqt5.qtopengl (5.15.10+dfsg-1build2) ... 231s Setting up python3-pymol (2.5.0+dfsg-1build4) ... 231s /usr/lib/python3/dist-packages/chempy/sdf.py:23: SyntaxWarning: invalid escape sequence '\s' 231s getkee = re.compile("^>\s+<([^>]*)>") 231s /usr/lib/python3/dist-packages/chempy/sdf.py:24: SyntaxWarning: invalid escape sequence '\s' 231s gettag = re.compile("^>\s+<[^>]*>\s+\((.*)\)") 231s /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:849: SyntaxWarning: invalid escape sequence '\.' 231s g = re.search("(.*)(\..*)$", save_file) 231s /usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py:889: SyntaxWarning: invalid escape sequence '\.' 231s if re.search("\.pym*$|\.PYM*$",ofile): 232s /usr/lib/python3/dist-packages/pymol/internal.py:252: SyntaxWarning: invalid escape sequence '\.' 232s if re.search("[0-9]*\.png$",fname): # remove numbering, etc. 232s /usr/lib/python3/dist-packages/pymol/internal.py:253: SyntaxWarning: invalid escape sequence '\.' 232s fname = re.sub("[0-9]*\.png$","",fname) 232s /usr/lib/python3/dist-packages/pymol/internal.py:254: SyntaxWarning: invalid escape sequence '\.' 232s if re.search("[0-9]*\.ppm$",fname): 232s /usr/lib/python3/dist-packages/pymol/internal.py:257: SyntaxWarning: invalid escape sequence '\.' 232s fname = re.sub("[0-9]*\.ppm$","",fname) 232s /usr/lib/python3/dist-packages/pymol/movie.py:818: SyntaxWarning: invalid escape sequence '\W' 232s '''Return full path to executable or None. 232s /usr/lib/python3/dist-packages/pymol/moving.py:733: SyntaxWarning: invalid escape sequence '\s' 232s input = re.sub("\s"," ",specification) 232s /usr/lib/python3/dist-packages/pymol/parser.py:48: SyntaxWarning: invalid escape sequence '\[' 232s remove_lists_re = re.compile("\[[^\]]*\]") 232s /usr/lib/python3/dist-packages/pymol/parser.py:408: SyntaxWarning: invalid escape sequence '\.' 232s if re.search("\.py$|\.pym$",path) is not None: 232s /usr/lib/python3/dist-packages/pymol/plugins/installation.py:23: SyntaxWarning: invalid escape sequence '\p' 232s ''' 232s /usr/lib/python3/dist-packages/pymol/viewing.py:899: SyntaxWarning: invalid escape sequence '\.' 232s re_pat = re.compile("[0-9]+\.") 232s /usr/lib/python3/dist-packages/pymol/viewing.py:912: SyntaxWarning: invalid escape sequence '\.' 232s new_file = re.sub("\.pse$",".psw",new_file,re.I) 232s /usr/lib/python3/dist-packages/pymol/viewing.py:914: SyntaxWarning: invalid escape sequence '\.' 232s new_file = re.sub("\.psw$",".pse",new_file,re.I) 232s /usr/lib/python3/dist-packages/pymol/wizard/pseudoatom.py:13: SyntaxWarning: invalid escape sequence '\8' 232s self.prefix = 'Label text: \888' 232s Setting up pymol (2.5.0+dfsg-1build4) ... 232s Setting up autopkgtest-satdep (0) ... 232s Processing triggers for man-db (2.12.0-3) ... 233s Processing triggers for udev (255.2-3ubuntu2) ... 233s Processing triggers for libc-bin (2.39-0ubuntu2) ... 239s (Reading database ... 57753 files and directories currently installed.) 239s Removing autopkgtest-satdep (0) ... 239s autopkgtest [23:41:12]: test command1: sh debian/tests/call-pymol-scripts examples/ \ "(start_pymol)|(xmlrpc01)|(sd_annotate)|(povray01)|(contact)|(dali)|(density)|(groel_es)|(packing)|(packsurf)|(ref_frame)|(ribosome)|(scenes2movie)|(ss_xfer)|(multiclip_ray)|(tkwindow)|(importing)" 239s autopkgtest [23:41:12]: test command1: [----------------------- 240s Search pymol scripts in /tmp/autopkgtest.72SPmY/build.VZX/src/examples... 240s Processing new directory /tmp/autopkgtest.72SPmY/build.VZX/src/examples 240s Run 'pymol -c /tmp/autopkgtest.72SPmY/build.VZX/src/examples/chempy/generate_amber.py'... 240s Traceback (most recent call last): 240s File "", line 189, in _run_module_as_main 240s File "", line 112, in _get_module_details 240s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 240s from imp import find_module 240s ModuleNotFoundError: No module named 'imp' 240s autopkgtest [23:41:13]: test command1: -----------------------] 241s autopkgtest [23:41:14]: test command1: - - - - - - - - - - results - - - - - - - - - - 241s command1 FAIL non-zero exit status 1 241s autopkgtest [23:41:14]: test command2: preparing testbed 242s Reading package lists... 243s Building dependency tree... 243s Reading state information... 243s Starting pkgProblemResolver with broken count: 0 243s Starting 2 pkgProblemResolver with broken count: 0 243s Done 243s The following NEW packages will be installed: 243s autopkgtest-satdep 243s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 243s Need to get 0 B/704 B of archives. 243s After this operation, 0 B of additional disk space will be used. 243s Get:1 /tmp/autopkgtest.72SPmY/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 244s Selecting previously unselected package autopkgtest-satdep. 244s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57753 files and directories currently installed.) 244s Preparing to unpack .../2-autopkgtest-satdep.deb ... 244s Unpacking autopkgtest-satdep (0) ... 244s Setting up autopkgtest-satdep (0) ... 246s (Reading database ... 57753 files and directories currently installed.) 246s Removing autopkgtest-satdep (0) ... 247s autopkgtest [23:41:20]: test command2: sh debian/tests/call-pymol-scripts data/demo 247s autopkgtest [23:41:20]: test command2: [----------------------- 247s Search pymol scripts in /tmp/autopkgtest.72SPmY/build.VZX/src/data/demo... 247s Processing new directory /tmp/autopkgtest.72SPmY/build.VZX/src/data/demo 247s Run 'pymol -c /tmp/autopkgtest.72SPmY/build.VZX/src/data/demo/cgo03.py'... 248s Traceback (most recent call last): 248s File "", line 189, in _run_module_as_main 248s File "", line 112, in _get_module_details 248s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 248s from imp import find_module 248s ModuleNotFoundError: No module named 'imp' 248s autopkgtest [23:41:21]: test command2: -----------------------] 248s command2 FAIL non-zero exit status 1 248s autopkgtest [23:41:21]: test command2: - - - - - - - - - - results - - - - - - - - - - 249s autopkgtest [23:41:22]: test command3: preparing testbed 251s Reading package lists... 251s Building dependency tree... 251s Reading state information... 251s Starting pkgProblemResolver with broken count: 0 252s Starting 2 pkgProblemResolver with broken count: 0 252s Done 252s The following NEW packages will be installed: 252s autopkgtest-satdep 252s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 252s Need to get 0 B/708 B of archives. 252s After this operation, 0 B of additional disk space will be used. 252s Get:1 /tmp/autopkgtest.72SPmY/3-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 252s Selecting previously unselected package autopkgtest-satdep. 252s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57753 files and directories currently installed.) 252s Preparing to unpack .../3-autopkgtest-satdep.deb ... 252s Unpacking autopkgtest-satdep (0) ... 252s Setting up autopkgtest-satdep (0) ... 255s (Reading database ... 57753 files and directories currently installed.) 255s Removing autopkgtest-satdep (0) ... 256s autopkgtest [23:41:29]: test command3: sh debian/tests/call-pymol-scripts /usr/share/pymol/examples \ "(cookbook/)|(xmlrpc01)|(sd_annotate)|(povray01)|(tkwindow)|(importing)" 256s autopkgtest [23:41:29]: test command3: [----------------------- 256s Search pymol scripts in /usr/share/pymol/examples... 256s Processing new directory /usr/share/pymol/examples 256s Run 'pymol -c /usr/share/pymol/examples/chempy/generate_amber.py'... 256s Traceback (most recent call last): 256s File "", line 189, in _run_module_as_main 256s File "", line 112, in _get_module_details 256s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 256s from imp import find_module 256s ModuleNotFoundError: No module named 'imp' 256s autopkgtest [23:41:29]: test command3: -----------------------] 257s command3 FAIL non-zero exit status 1 257s autopkgtest [23:41:30]: test command3: - - - - - - - - - - results - - - - - - - - - - 257s autopkgtest [23:41:30]: test command4: preparing testbed 258s Reading package lists... 259s Building dependency tree... 259s Reading state information... 259s Starting pkgProblemResolver with broken count: 0 259s Starting 2 pkgProblemResolver with broken count: 0 259s Done 260s The following NEW packages will be installed: 260s autopkgtest-satdep 260s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 260s Need to get 0 B/708 B of archives. 260s After this operation, 0 B of additional disk space will be used. 260s Get:1 /tmp/autopkgtest.72SPmY/4-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 260s Selecting previously unselected package autopkgtest-satdep. 260s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57753 files and directories currently installed.) 260s Preparing to unpack .../4-autopkgtest-satdep.deb ... 260s Unpacking autopkgtest-satdep (0) ... 260s Setting up autopkgtest-satdep (0) ... 262s (Reading database ... 57753 files and directories currently installed.) 262s Removing autopkgtest-satdep (0) ... 263s autopkgtest [23:41:36]: test command4: sh debian/tests/call-pymol-scripts /usr/share/pymol/examples/cookbook multiclip_ray 263s autopkgtest [23:41:36]: test command4: [----------------------- 263s Search pymol scripts in /usr/share/pymol/examples/cookbook... 263s Processing new directory /usr/share/pymol/examples/cookbook 263s Run 'pymol -c /usr/share/pymol/examples/cookbook/area_diff.pml'... 263s Traceback (most recent call last): 263s File "", line 189, in _run_module_as_main 263s File "", line 112, in _get_module_details 263s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 263s from imp import find_module 263s ModuleNotFoundError: No module named 'imp' 264s autopkgtest [23:41:37]: test command4: -----------------------] 264s autopkgtest [23:41:37]: test command4: - - - - - - - - - - results - - - - - - - - - - 264s command4 FAIL non-zero exit status 1 264s autopkgtest [23:41:37]: test command5: preparing testbed 266s Reading package lists... 266s Building dependency tree... 266s Reading state information... 266s Starting pkgProblemResolver with broken count: 0 266s Starting 2 pkgProblemResolver with broken count: 0 266s Done 266s The following NEW packages will be installed: 266s autopkgtest-satdep 266s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 266s Need to get 0 B/704 B of archives. 266s After this operation, 0 B of additional disk space will be used. 266s Get:1 /tmp/autopkgtest.72SPmY/5-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 267s Selecting previously unselected package autopkgtest-satdep. 267s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 57753 files and directories currently installed.) 267s Preparing to unpack .../5-autopkgtest-satdep.deb ... 267s Unpacking autopkgtest-satdep (0) ... 267s Setting up autopkgtest-satdep (0) ... 269s (Reading database ... 57753 files and directories currently installed.) 269s Removing autopkgtest-satdep (0) ... 270s autopkgtest [23:41:43]: test command5: (cd /usr/share/pymol/examples/devel/ && pymol -c sd_annotate.pml) 270s autopkgtest [23:41:43]: test command5: [----------------------- 270s Traceback (most recent call last): 270s File "", line 189, in _run_module_as_main 270s File "", line 112, in _get_module_details 270s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 270s from imp import find_module 270s ModuleNotFoundError: No module named 'imp' 270s Error in sys.excepthook: 270s Traceback (most recent call last): 270s File "/usr/lib/python3/dist-packages/apport_python_hook.py", line 228, in partial_apport_excepthook 270s return apport_excepthook(binary, exc_type, exc_obj, exc_tb) 270s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 270s File "/usr/lib/python3/dist-packages/apport_python_hook.py", line 114, in apport_excepthook 270s report["ExecutableTimestamp"] = str(int(os.stat(binary).st_mtime)) 270s ^^^^^^^^^^^^^^^ 270s FileNotFoundError: [Errno 2] No such file or directory: '/usr/share/pymol/examples/devel/-m' 270s 270s Original exception was: 270s Traceback (most recent call last): 270s File "", line 189, in _run_module_as_main 270s File "", line 112, in _get_module_details 270s File "/usr/lib/python3/dist-packages/pymol/__init__.py", line 81, in 270s from imp import find_module 270s ModuleNotFoundError: No module named 'imp' 271s autopkgtest [23:41:44]: test command5: -----------------------] 271s command5 FAIL non-zero exit status 1 271s autopkgtest [23:41:44]: test command5: - - - - - - - - - - results - - - - - - - - - - 271s autopkgtest [23:41:44]: @@@@@@@@@@@@@@@@@@@@ summary 271s command1 FAIL non-zero exit status 1 271s command2 FAIL non-zero exit status 1 271s command3 FAIL non-zero exit status 1 271s command4 FAIL non-zero exit status 1 271s command5 FAIL non-zero exit status 1 295s Creating nova instance adt-noble-s390x-pymol-20240316-233713-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-s390x-server-20240316.img (UUID 7afe023c-7cb8-41b6-91a7-c69e7d1e7c0d)...