0s autopkgtest [12:10:45]: starting date and time: 2024-03-22 12:10:45+0000 0s autopkgtest [12:10:45]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [12:10:45]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.0iqx8c8x/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:sphinx --apt-upgrade nipy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/7.2.6-6 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-13.secgroup --name adt-noble-s390x-nipy-20240322-121045-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 84s autopkgtest [12:12:09]: testbed dpkg architecture: s390x 84s autopkgtest [12:12:09]: testbed apt version: 2.7.12 84s autopkgtest [12:12:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 85s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 85s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [54.0 kB] 85s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3807 kB] 86s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 87s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 87s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [665 kB] 87s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 87s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 87s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 87s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3992 kB] 88s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 88s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.1 kB] 88s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 90s Fetched 9195 kB in 3s (2678 kB/s) 90s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Calculating upgrade... 93s The following packages will be upgraded: 93s cloud-init debianutils fonts-ubuntu-console python3-markupsafe 94s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 94s Need to get 719 kB of archives. 94s After this operation, 11.3 kB disk space will be freed. 94s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 94s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 94s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 94s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 94s Preconfiguring packages ... 94s Fetched 719 kB in 1s (1112 kB/s) 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 95s Preparing to unpack .../debianutils_5.17_s390x.deb ... 95s Unpacking debianutils (5.17) over (5.16) ... 95s Setting up debianutils (5.17) ... 95s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 95s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 95s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 95s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 95s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 95s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 95s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 95s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 95s Setting up cloud-init (24.1.2-0ubuntu1) ... 96s Setting up python3-markupsafe (2.1.5-1build1) ... 97s Processing triggers for man-db (2.12.0-3) ... 97s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s Unknown architecture, assuming PC-style ttyS0 99s sh: Attempting to set up Debian/Ubuntu apt sources automatically 99s sh: Distribution appears to be Ubuntu 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s eatmydata is already the newest version (131-1). 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 101s dbus is already the newest version (1.14.10-4ubuntu1). 101s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s rng-tools-debian is already the newest version (2.4). 101s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s The following packages will be REMOVED: 101s cloud-init* python3-configobj* python3-debconf* 102s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 102s After this operation, 3256 kB disk space will be freed. 102s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 102s Removing cloud-init (24.1.2-0ubuntu1) ... 102s Removing python3-configobj (5.0.8-3) ... 102s Removing python3-debconf (1.5.86) ... 102s Processing triggers for man-db (2.12.0-3) ... 103s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 103s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 103s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 103s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 103s invoke-rc.d: policy-rc.d denied execution of try-restart. 104s Reading package lists... 104s Building dependency tree... 104s Reading state information... 104s linux-generic is already the newest version (6.8.0-11.11+1). 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 105s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 105s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 105s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 107s Reading package lists... 107s Reading package lists... 107s Building dependency tree... 107s Reading state information... 107s Calculating upgrade... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 108s autopkgtest [12:12:33]: rebooting testbed after setup commands that affected boot 126s autopkgtest [12:12:51]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 129s autopkgtest [12:12:54]: @@@@@@@@@@@@@@@@@@@@ apt-source nipy 133s Get:1 http://ftpmaster.internal/ubuntu noble/universe nipy 0.6.0-1 (dsc) [2624 B] 133s Get:2 http://ftpmaster.internal/ubuntu noble/universe nipy 0.6.0-1 (tar) [1650 kB] 133s Get:3 http://ftpmaster.internal/ubuntu noble/universe nipy 0.6.0-1 (diff) [11.3 kB] 133s gpgv: Signature made Sat Dec 30 23:03:53 2023 UTC 133s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 133s gpgv: issuer "emollier@debian.org" 133s gpgv: Can't check signature: No public key 133s dpkg-source: warning: cannot verify inline signature for ./nipy_0.6.0-1.dsc: no acceptable signature found 133s autopkgtest [12:12:58]: testing package nipy version 0.6.0-1 134s autopkgtest [12:12:59]: build not needed 134s autopkgtest [12:12:59]: test command1: preparing testbed 136s Reading package lists... 136s Building dependency tree... 136s Reading state information... 137s Starting pkgProblemResolver with broken count: 0 137s Starting 2 pkgProblemResolver with broken count: 0 137s Done 137s The following additional packages will be installed: 137s fonts-mathjax libblas3 libgfortran5 libjs-jquery libjs-mathjax 137s libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 python-nipy-doc 137s python3-decorator python3-iniconfig python3-mpmath python3-nibabel 137s python3-nipy python3-nipy-lib python3-numpy python3-packaging python3-pluggy 137s python3-pytest python3-scipy python3-sympy python3-transforms3d 137s Suggested packages: 137s fonts-mathjax-extras fonts-stix libjs-mathjax-doc python-mpmath-doc 137s python3-gmpy2 python3-matplotlib python-nibabel-doc python3-mvpa gcc 137s gfortran python3-dev python-scipy-doc texlive-fonts-extra dvipng 137s python-sympy-doc 137s Recommended packages: 137s javascript-common python3-pydicom python3-fuse python3-matplotlib mayavi2 137s g++ | c++-compiler python3-pil isympy-common 137s The following NEW packages will be installed: 137s autopkgtest-satdep fonts-mathjax libblas3 libgfortran5 libjs-jquery 137s libjs-mathjax libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 137s python-nipy-doc python3-decorator python3-iniconfig python3-mpmath 137s python3-nibabel python3-nipy python3-nipy-lib python3-numpy 137s python3-packaging python3-pluggy python3-pytest python3-scipy python3-sympy 137s python3-transforms3d 137s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 137s Need to get 51.3 MB/51.3 MB of archives. 137s After this operation, 249 MB of additional disk space will be used. 137s Get:1 /tmp/autopkgtest.nWsG6E/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B] 137s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 138s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 138s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 138s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 138s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 138s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libjs-sphinxdoc all 7.2.6-4 [149 kB] 138s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 139s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1 [28.4 kB] 139s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 139s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 139s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mpmath all 1.2.1-3 [421 kB] 139s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-2 [5137 kB] 139s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 139s Get:15 http://ftpmaster.internal/ubuntu noble/universe s390x python3-scipy s390x 1.11.4-6 [20.1 MB] 140s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nibabel all 5.2.1-1 [2701 kB] 140s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x python3-sympy all 1.12-7 [3966 kB] 141s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x python3-transforms3d all 0.4.1+ds-1 [1359 kB] 141s Get:19 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nipy-lib s390x 0.6.0-1 [1404 kB] 141s Get:20 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nipy all 0.6.0-1 [868 kB] 141s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] 141s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB] 141s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 141s Get:24 http://ftpmaster.internal/ubuntu noble/universe s390x python-nipy-doc all 0.6.0-1 [2628 kB] 141s Fetched 51.3 MB in 4s (13.7 MB/s) 141s Selecting previously unselected package fonts-mathjax. 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51726 files and directories currently installed.) 142s Preparing to unpack .../00-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 142s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 142s Selecting previously unselected package libblas3:s390x. 142s Preparing to unpack .../01-libblas3_3.12.0-3_s390x.deb ... 142s Unpacking libblas3:s390x (3.12.0-3) ... 142s Selecting previously unselected package libgfortran5:s390x. 142s Preparing to unpack .../02-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 142s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 142s Selecting previously unselected package libjs-jquery. 142s Preparing to unpack .../03-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 142s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 142s Selecting previously unselected package libjs-underscore. 142s Preparing to unpack .../04-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 142s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 142s Selecting previously unselected package libjs-sphinxdoc. 142s Preparing to unpack .../05-libjs-sphinxdoc_7.2.6-4_all.deb ... 142s Unpacking libjs-sphinxdoc (7.2.6-4) ... 142s Selecting previously unselected package liblapack3:s390x. 142s Preparing to unpack .../06-liblapack3_3.12.0-3_s390x.deb ... 142s Unpacking liblapack3:s390x (3.12.0-3) ... 142s Selecting previously unselected package liblbfgsb0:s390x. 142s Preparing to unpack .../07-liblbfgsb0_3.0+dfsg.4-1_s390x.deb ... 142s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1) ... 142s Selecting previously unselected package python3-decorator. 142s Preparing to unpack .../08-python3-decorator_5.1.1-5_all.deb ... 142s Unpacking python3-decorator (5.1.1-5) ... 142s Selecting previously unselected package python3-iniconfig. 142s Preparing to unpack .../09-python3-iniconfig_1.1.1-2_all.deb ... 142s Unpacking python3-iniconfig (1.1.1-2) ... 142s Selecting previously unselected package python3-mpmath. 142s Preparing to unpack .../10-python3-mpmath_1.2.1-3_all.deb ... 142s Unpacking python3-mpmath (1.2.1-3) ... 142s Selecting previously unselected package python3-numpy. 142s Preparing to unpack .../11-python3-numpy_1%3a1.24.2-2_s390x.deb ... 142s Unpacking python3-numpy (1:1.24.2-2) ... 143s Selecting previously unselected package python3-packaging. 143s Preparing to unpack .../12-python3-packaging_23.2-1_all.deb ... 143s Unpacking python3-packaging (23.2-1) ... 143s Selecting previously unselected package python3-scipy. 143s Preparing to unpack .../13-python3-scipy_1.11.4-6_s390x.deb ... 143s Unpacking python3-scipy (1.11.4-6) ... 144s Selecting previously unselected package python3-nibabel. 144s Preparing to unpack .../14-python3-nibabel_5.2.1-1_all.deb ... 144s Unpacking python3-nibabel (5.2.1-1) ... 144s Selecting previously unselected package python3-sympy. 144s Preparing to unpack .../15-python3-sympy_1.12-7_all.deb ... 144s Unpacking python3-sympy (1.12-7) ... 144s Selecting previously unselected package python3-transforms3d. 144s Preparing to unpack .../16-python3-transforms3d_0.4.1+ds-1_all.deb ... 144s Unpacking python3-transforms3d (0.4.1+ds-1) ... 144s Selecting previously unselected package python3-nipy-lib:s390x. 144s Preparing to unpack .../17-python3-nipy-lib_0.6.0-1_s390x.deb ... 144s Unpacking python3-nipy-lib:s390x (0.6.0-1) ... 144s Selecting previously unselected package python3-nipy. 144s Preparing to unpack .../18-python3-nipy_0.6.0-1_all.deb ... 144s Unpacking python3-nipy (0.6.0-1) ... 144s Selecting previously unselected package python3-pluggy. 144s Preparing to unpack .../19-python3-pluggy_1.4.0-1_all.deb ... 144s Unpacking python3-pluggy (1.4.0-1) ... 144s Selecting previously unselected package python3-pytest. 144s Preparing to unpack .../20-python3-pytest_7.4.4-1_all.deb ... 144s Unpacking python3-pytest (7.4.4-1) ... 144s Selecting previously unselected package libjs-mathjax. 144s Preparing to unpack .../21-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 144s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 146s Selecting previously unselected package python-nipy-doc. 146s Preparing to unpack .../22-python-nipy-doc_0.6.0-1_all.deb ... 146s Unpacking python-nipy-doc (0.6.0-1) ... 146s Selecting previously unselected package autopkgtest-satdep. 146s Preparing to unpack .../23-1-autopkgtest-satdep.deb ... 146s Unpacking autopkgtest-satdep (0) ... 146s Setting up python3-iniconfig (1.1.1-2) ... 146s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 146s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 146s Setting up python3-decorator (5.1.1-5) ... 147s Setting up libblas3:s390x (3.12.0-3) ... 147s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 147s Setting up python3-packaging (23.2-1) ... 147s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 147s Setting up python3-pluggy (1.4.0-1) ... 147s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 147s Setting up python3-mpmath (1.2.1-3) ... 148s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 148s Setting up python3-sympy (1.12-7) ... 155s Setting up liblapack3:s390x (3.12.0-3) ... 155s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 155s Setting up python3-pytest (7.4.4-1) ... 155s Setting up python3-numpy (1:1.24.2-2) ... 157s Setting up libjs-sphinxdoc (7.2.6-4) ... 157s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1) ... 157s Setting up python3-transforms3d (0.4.1+ds-1) ... 158s Setting up python3-scipy (1.11.4-6) ... 161s Setting up python-nipy-doc (0.6.0-1) ... 161s Setting up python3-nibabel (5.2.1-1) ... 162s Setting up python3-nipy-lib:s390x (0.6.0-1) ... 162s Setting up python3-nipy (0.6.0-1) ... 163s Setting up autopkgtest-satdep (0) ... 163s Processing triggers for man-db (2.12.0-3) ... 163s Processing triggers for libc-bin (2.39-0ubuntu2) ... 167s (Reading database ... 62186 files and directories currently installed.) 167s Removing autopkgtest-satdep (0) ... 167s autopkgtest [12:13:32]: test command1: cd debian/tests && python3 -m pytest nipy_test.py 167s autopkgtest [12:13:32]: test command1: [----------------------- 168s ============================= test session starts ============================== 168s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 168s rootdir: /tmp/autopkgtest.nWsG6E/build.xZ9/src/debian/tests 168s collected 4 items 168s 168s nipy_test.py .... [100%] 168s 168s =============================== warnings summary =============================== 168s nipy_test.py::test_image_save_to_file 168s /usr/lib/python3/dist-packages/nipy/io/files.py:141: FutureWarning: Default `strict` currently False; this will change to True in a future version of nipy 168s ni_img = nipy2nifti(img, data_dtype = io_dtype) 168s 168s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 168s ========================= 4 passed, 1 warning in 0.17s ========================= 168s autopkgtest [12:13:33]: test command1: -----------------------] 169s command1 PASS 169s autopkgtest [12:13:34]: test command1: - - - - - - - - - - results - - - - - - - - - - 169s autopkgtest [12:13:34]: test autodep8-python3: preparing testbed 265s autopkgtest [12:15:10]: testbed dpkg architecture: s390x 266s autopkgtest [12:15:11]: testbed apt version: 2.7.12 266s autopkgtest [12:15:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup 267s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 267s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 267s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [54.0 kB] 267s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3807 kB] 267s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 267s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [665 kB] 267s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 267s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 267s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 267s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3992 kB] 268s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 268s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.1 kB] 268s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 270s Fetched 9195 kB in 2s (4037 kB/s) 270s Reading package lists... 272s Reading package lists... 272s Building dependency tree... 272s Reading state information... 272s Calculating upgrade... 273s The following packages will be upgraded: 273s cloud-init debianutils fonts-ubuntu-console python3-markupsafe 273s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 273s Need to get 719 kB of archives. 273s After this operation, 11.3 kB disk space will be freed. 273s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 273s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x fonts-ubuntu-console all 0.869+git20240321-0ubuntu1 [18.7 kB] 273s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 273s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 274s Preconfiguring packages ... 274s Fetched 719 kB in 1s (1048 kB/s) 274s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 274s Preparing to unpack .../debianutils_5.17_s390x.deb ... 274s Unpacking debianutils (5.17) over (5.16) ... 274s Setting up debianutils (5.17) ... 274s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 274s Preparing to unpack .../fonts-ubuntu-console_0.869+git20240321-0ubuntu1_all.deb ... 274s Unpacking fonts-ubuntu-console (0.869+git20240321-0ubuntu1) over (0.869-0ubuntu1) ... 274s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 274s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 274s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 274s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 274s Setting up fonts-ubuntu-console (0.869+git20240321-0ubuntu1) ... 274s Setting up cloud-init (24.1.2-0ubuntu1) ... 275s Setting up python3-markupsafe (2.1.5-1build1) ... 275s Processing triggers for man-db (2.12.0-3) ... 276s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 277s Reading package lists... 277s Building dependency tree... 277s Reading state information... 277s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 277s Unknown architecture, assuming PC-style ttyS0 277s sh: Attempting to set up Debian/Ubuntu apt sources automatically 277s sh: Distribution appears to be Ubuntu 278s Reading package lists... 278s Building dependency tree... 278s Reading state information... 279s eatmydata is already the newest version (131-1). 279s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s Reading package lists... 279s Building dependency tree... 279s Reading state information... 279s dbus is already the newest version (1.14.10-4ubuntu1). 279s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s Reading package lists... 279s Building dependency tree... 279s Reading state information... 279s rng-tools-debian is already the newest version (2.4). 279s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 279s Reading package lists... 279s Building dependency tree... 279s Reading state information... 280s The following packages will be REMOVED: 280s cloud-init* python3-configobj* python3-debconf* 280s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 280s After this operation, 3256 kB disk space will be freed. 280s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 280s Removing cloud-init (24.1.2-0ubuntu1) ... 280s Removing python3-configobj (5.0.8-3) ... 280s Removing python3-debconf (1.5.86) ... 280s Processing triggers for man-db (2.12.0-3) ... 281s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 281s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 281s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 281s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 281s invoke-rc.d: policy-rc.d denied execution of try-restart. 282s Reading package lists... 282s Building dependency tree... 282s Reading state information... 282s linux-generic is already the newest version (6.8.0-11.11+1). 282s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 282s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 282s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 282s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 284s Reading package lists... 284s Reading package lists... 284s Building dependency tree... 284s Reading state information... 284s Calculating upgrade... 285s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 285s Reading package lists... 285s Building dependency tree... 285s Reading state information... 285s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 285s autopkgtest [12:15:30]: rebooting testbed after setup commands that affected boot 303s Reading package lists... 303s Building dependency tree... 303s Reading state information... 303s Starting pkgProblemResolver with broken count: 0 303s Starting 2 pkgProblemResolver with broken count: 0 303s Done 303s The following additional packages will be installed: 303s libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all python3-decorator 303s python3-mpmath python3-nibabel python3-nipy python3-nipy-lib python3-numpy 303s python3-packaging python3-scipy python3-sympy python3-transforms3d 303s Suggested packages: 303s python-mpmath-doc python3-gmpy2 python3-matplotlib python-nibabel-doc 303s python3-mvpa gcc gfortran python3-dev python3-pytest python-scipy-doc 303s texlive-fonts-extra dvipng python-sympy-doc 303s Recommended packages: 303s python3-pydicom python3-fuse python3-matplotlib mayavi2 g++ | c++-compiler 303s python3-pil isympy-common 303s The following NEW packages will be installed: 303s autopkgtest-satdep libblas3 libgfortran5 liblapack3 liblbfgsb0 python3-all 303s python3-decorator python3-mpmath python3-nibabel python3-nipy 303s python3-nipy-lib python3-numpy python3-packaging python3-scipy python3-sympy 303s python3-transforms3d 303s 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. 303s Need to get 39.9 MB/39.9 MB of archives. 303s After this operation, 187 MB of additional disk space will be used. 303s Get:1 /tmp/autopkgtest.nWsG6E/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B] 303s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 304s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 304s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 305s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x liblbfgsb0 s390x 3.0+dfsg.4-1 [28.4 kB] 305s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x python3-all s390x 3.12.1-0ubuntu2 [908 B] 305s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 305s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mpmath all 1.2.1-3 [421 kB] 305s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.24.2-2 [5137 kB] 306s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 306s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x python3-scipy s390x 1.11.4-6 [20.1 MB] 307s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nibabel all 5.2.1-1 [2701 kB] 307s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x python3-sympy all 1.12-7 [3966 kB] 308s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x python3-transforms3d all 0.4.1+ds-1 [1359 kB] 308s Get:15 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nipy-lib s390x 0.6.0-1 [1404 kB] 308s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-nipy all 0.6.0-1 [868 kB] 308s Fetched 39.9 MB in 5s (8701 kB/s) 308s Selecting previously unselected package libblas3:s390x. 308s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51726 files and directories currently installed.) 308s Preparing to unpack .../00-libblas3_3.12.0-3_s390x.deb ... 308s Unpacking libblas3:s390x (3.12.0-3) ... 308s Selecting previously unselected package libgfortran5:s390x. 308s Preparing to unpack .../01-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 308s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 308s Selecting previously unselected package liblapack3:s390x. 308s Preparing to unpack .../02-liblapack3_3.12.0-3_s390x.deb ... 308s Unpacking liblapack3:s390x (3.12.0-3) ... 308s Selecting previously unselected package liblbfgsb0:s390x. 308s Preparing to unpack .../03-liblbfgsb0_3.0+dfsg.4-1_s390x.deb ... 308s Unpacking liblbfgsb0:s390x (3.0+dfsg.4-1) ... 308s Selecting previously unselected package python3-all. 308s Preparing to unpack .../04-python3-all_3.12.1-0ubuntu2_s390x.deb ... 308s Unpacking python3-all (3.12.1-0ubuntu2) ... 308s Selecting previously unselected package python3-decorator. 308s Preparing to unpack .../05-python3-decorator_5.1.1-5_all.deb ... 308s Unpacking python3-decorator (5.1.1-5) ... 308s Selecting previously unselected package python3-mpmath. 308s Preparing to unpack .../06-python3-mpmath_1.2.1-3_all.deb ... 308s Unpacking python3-mpmath (1.2.1-3) ... 308s Selecting previously unselected package python3-numpy. 308s Preparing to unpack .../07-python3-numpy_1%3a1.24.2-2_s390x.deb ... 308s Unpacking python3-numpy (1:1.24.2-2) ... 308s Selecting previously unselected package python3-packaging. 308s Preparing to unpack .../08-python3-packaging_23.2-1_all.deb ... 308s Unpacking python3-packaging (23.2-1) ... 309s Selecting previously unselected package python3-scipy. 309s Preparing to unpack .../09-python3-scipy_1.11.4-6_s390x.deb ... 309s Unpacking python3-scipy (1.11.4-6) ... 309s Selecting previously unselected package python3-nibabel. 309s Preparing to unpack .../10-python3-nibabel_5.2.1-1_all.deb ... 309s Unpacking python3-nibabel (5.2.1-1) ... 309s Selecting previously unselected package python3-sympy. 309s Preparing to unpack .../11-python3-sympy_1.12-7_all.deb ... 309s Unpacking python3-sympy (1.12-7) ... 310s Selecting previously unselected package python3-transforms3d. 310s Preparing to unpack .../12-python3-transforms3d_0.4.1+ds-1_all.deb ... 310s Unpacking python3-transforms3d (0.4.1+ds-1) ... 310s Selecting previously unselected package python3-nipy-lib:s390x. 310s Preparing to unpack .../13-python3-nipy-lib_0.6.0-1_s390x.deb ... 310s Unpacking python3-nipy-lib:s390x (0.6.0-1) ... 310s Selecting previously unselected package python3-nipy. 310s Preparing to unpack .../14-python3-nipy_0.6.0-1_all.deb ... 310s Unpacking python3-nipy (0.6.0-1) ... 310s Selecting previously unselected package autopkgtest-satdep. 310s Preparing to unpack .../15-2-autopkgtest-satdep.deb ... 310s Unpacking autopkgtest-satdep (0) ... 310s Setting up python3-all (3.12.1-0ubuntu2) ... 310s Setting up python3-decorator (5.1.1-5) ... 310s Setting up libblas3:s390x (3.12.0-3) ... 310s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 310s Setting up python3-packaging (23.2-1) ... 310s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 310s Setting up python3-mpmath (1.2.1-3) ... 311s Setting up python3-sympy (1.12-7) ... 315s Setting up liblapack3:s390x (3.12.0-3) ... 315s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 315s Setting up python3-numpy (1:1.24.2-2) ... 317s Setting up liblbfgsb0:s390x (3.0+dfsg.4-1) ... 317s Setting up python3-transforms3d (0.4.1+ds-1) ... 317s Setting up python3-scipy (1.11.4-6) ... 320s Setting up python3-nibabel (5.2.1-1) ... 320s Setting up python3-nipy-lib:s390x (0.6.0-1) ... 320s Setting up python3-nipy (0.6.0-1) ... 321s Setting up autopkgtest-satdep (0) ... 321s Processing triggers for man-db (2.12.0-3) ... 321s Processing triggers for libc-bin (2.39-0ubuntu2) ... 323s (Reading database ... 56920 files and directories currently installed.) 323s Removing autopkgtest-satdep (0) ... 325s autopkgtest [12:16:10]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import nipy; print(nipy)" ; done 325s autopkgtest [12:16:10]: test autodep8-python3: [----------------------- 325s Testing with python3.12: 325s 326s autopkgtest [12:16:11]: test autodep8-python3: -----------------------] 326s autodep8-python3 PASS (superficial) 326s autopkgtest [12:16:11]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 327s autopkgtest [12:16:12]: @@@@@@@@@@@@@@@@@@@@ summary 327s command1 PASS 327s autodep8-python3 PASS (superficial) 338s Creating nova instance adt-noble-s390x-nipy-20240322-121045-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID f7ee8f0f-480f-4014-94f0-3be2a19e259d)... 338s Creating nova instance adt-noble-s390x-nipy-20240322-121045-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID f7ee8f0f-480f-4014-94f0-3be2a19e259d)...