0s autopkgtest [00:08:38]: starting date and time: 2024-03-26 00:08:38+0000
  0s autopkgtest [00:08:38]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps
  0s autopkgtest [00:08:38]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vaglsyp0/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade ncbi-tools6 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=motif/2.3.8-3.1 libpng1.6/1.6.43-3 libxt/1:1.2.1-1.2 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-24.secgroup --name adt-noble-s390x-ncbi-tools6-20240326-000838-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
125s autopkgtest [00:10:43]: testbed dpkg architecture: s390x
125s autopkgtest [00:10:43]: testbed apt version: 2.7.12
125s autopkgtest [00:10:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup
126s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
127s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB]
127s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3976 kB]
128s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [7592 B]
128s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [497 kB]
128s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [692 kB]
128s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B]
128s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B]
128s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B]
128s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4130 kB]
129s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B]
129s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [47.8 kB]
129s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B]
130s Fetched 9536 kB in 3s (2743 kB/s)
131s Reading package lists...
133s Reading package lists...
133s Building dependency tree...
133s Reading state information...
133s Calculating upgrade...
133s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
133s Reading package lists...
134s Building dependency tree...
134s Reading state information...
134s 0 upgraded, 0 newly installed, 0 to remove and 242 not upgraded.
134s Unknown architecture, assuming PC-style ttyS0
134s sh: Attempting to set up Debian/Ubuntu apt sources automatically
134s sh: Distribution appears to be Ubuntu
135s Reading package lists...
135s Building dependency tree...
135s Reading state information...
136s eatmydata is already the newest version (131-1).
136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
136s Reading package lists...
136s Building dependency tree...
136s Reading state information...
136s dbus is already the newest version (1.14.10-4ubuntu1).
136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
136s Reading package lists...
136s Building dependency tree...
136s Reading state information...
136s rng-tools-debian is already the newest version (2.4).
136s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
136s Reading package lists...
137s Building dependency tree...
137s Reading state information...
137s The following packages will be REMOVED:
137s   cloud-init* python3-configobj* python3-debconf*
137s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded.
137s After this operation, 3256 kB disk space will be freed.
137s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 52170 files and directories currently installed.)
137s Removing cloud-init (24.1.2-0ubuntu1) ...
137s Removing python3-configobj (5.0.8-3) ...
138s Removing python3-debconf (1.5.86) ...
138s Processing triggers for man-db (2.12.0-3) ...
138s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 51781 files and directories currently installed.)
138s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ...
138s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed
138s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ...
138s invoke-rc.d: policy-rc.d denied execution of try-restart.
139s Reading package lists...
139s Building dependency tree...
139s Reading state information...
139s linux-generic is already the newest version (6.8.0-11.11+1).
139s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
139s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
139s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
140s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
141s Reading package lists...
141s Reading package lists...
141s Building dependency tree...
141s Reading state information...
143s Calculating upgrade...autopkgtest [00:11:00]: rebooting testbed after setup commands that affected boot
143s 
143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
143s Reading package lists...
143s Building dependency tree...
143s Reading state information...
143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
158s autopkgtest [00:11:16]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024
161s autopkgtest [00:11:19]: @@@@@@@@@@@@@@@@@@@@ apt-source ncbi-tools6
170s Get:1 http://ftpmaster.internal/ubuntu noble/universe ncbi-tools6 6.1.20170106+dfsg1-10 (dsc) [2892 B]
170s Get:2 http://ftpmaster.internal/ubuntu noble/universe ncbi-tools6 6.1.20170106+dfsg1-10 (tar) [58.3 MB]
170s Get:3 http://ftpmaster.internal/ubuntu noble/universe ncbi-tools6 6.1.20170106+dfsg1-10 (diff) [1513 kB]
170s gpgv: Signature made Fri Sep  2 20:37:56 2022 UTC
170s gpgv:                using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2
170s gpgv: Can't check signature: No public key
170s dpkg-source: warning: cannot verify inline signature for ./ncbi-tools6_6.1.20170106+dfsg1-10.dsc: no acceptable signature found
178s autopkgtest [00:11:36]: testing package ncbi-tools6 version 6.1.20170106+dfsg1-10
184s autopkgtest [00:11:42]: build not needed
1185s autopkgtest [00:28:23]: test run-unit-test: preparing testbed
1187s Reading package lists...
1187s Building dependency tree...
1187s Reading state information...
1187s Starting pkgProblemResolver with broken count: 0
1187s Starting 2 pkgProblemResolver with broken count: 0
1187s Done
1187s The following additional packages will be installed:
1187s   fontconfig-config fonts-dejavu-core fonts-dejavu-mono libbrotli-dev
1187s   libbz2-dev libc-dev-bin libc6-dev libcrypt-dev libdrm-amdgpu1
1187s   libdrm-nouveau2 libdrm-radeon1 libexpat1-dev libfontconfig-dev
1187s   libfontconfig1 libfontconfig1-dev libfreetype-dev libfreetype6 libgl-dev
1187s   libgl1 libgl1-mesa-dri libglapi-mesa libglu1-mesa libglu1-mesa-dev libglvnd0
1187s   libglx-dev libglx-mesa0 libglx0 libice-dev libice6 libjpeg-turbo8 libjpeg8
1187s   libllvm17 libmotif-common libmotif-dev libmrm4 libncbi6 libncbi6-dev
1187s   libopengl-dev libopengl0 libpkgconf3 libpng-dev libpthread-stubs0-dev
1187s   libsm-dev libsm6 libuil4 libvibrant6-dev libvibrant6b libvulkan1 libx11-dev
1187s   libx11-xcb1 libxau-dev libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
1187s   libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0
1187s   libxcb1-dev libxdmcp-dev libxext-dev libxfixes3 libxft-dev libxft2 libxm4
1187s   libxmu-dev libxmu-headers libxmu6 libxrender-dev libxrender1 libxshmfence1
1187s   libxt-dev libxt6 libxxf86vm1 linux-libc-dev ncbi-cn3d ncbi-data
1187s   ncbi-rrna-data ncbi-tools-bin ncbi-tools-x11 pkgconf pkgconf-bin
1187s   rpcsvc-proto uil uuid-dev x11-common x11proto-dev xorg-sgml-doctools
1187s   xtrans-dev zlib1g-dev
1187s Suggested packages:
1187s   glibc-doc manpages-dev freetype2-doc libice-doc libsm-doc libx11-doc
1187s   libxcb-doc libxext-doc libxt-doc ncbi-blast+
1187s Recommended packages:
1187s   bzip2-doc manpages manpages-dev libc-devtools libgl1-amber-dri libpng-tools
1187s   mesa-vulkan-drivers | vulkan-icd ncbi-blast+
1187s The following NEW packages will be installed:
1187s   autopkgtest-satdep fontconfig-config fonts-dejavu-core fonts-dejavu-mono
1187s   libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcrypt-dev libdrm-amdgpu1
1187s   libdrm-nouveau2 libdrm-radeon1 libexpat1-dev libfontconfig-dev
1187s   libfontconfig1 libfontconfig1-dev libfreetype-dev libfreetype6 libgl-dev
1187s   libgl1 libgl1-mesa-dri libglapi-mesa libglu1-mesa libglu1-mesa-dev libglvnd0
1187s   libglx-dev libglx-mesa0 libglx0 libice-dev libice6 libjpeg-turbo8 libjpeg8
1187s   libllvm17 libmotif-common libmotif-dev libmrm4 libncbi6 libncbi6-dev
1187s   libopengl-dev libopengl0 libpkgconf3 libpng-dev libpthread-stubs0-dev
1187s   libsm-dev libsm6 libuil4 libvibrant6-dev libvibrant6b libvulkan1 libx11-dev
1187s   libx11-xcb1 libxau-dev libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
1187s   libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0
1187s   libxcb1-dev libxdmcp-dev libxext-dev libxfixes3 libxft-dev libxft2 libxm4
1187s   libxmu-dev libxmu-headers libxmu6 libxrender-dev libxrender1 libxshmfence1
1187s   libxt-dev libxt6 libxxf86vm1 linux-libc-dev ncbi-cn3d ncbi-data
1187s   ncbi-rrna-data ncbi-tools-bin ncbi-tools-x11 pkgconf pkgconf-bin
1187s   rpcsvc-proto uil uuid-dev x11-common x11proto-dev xorg-sgml-doctools
1187s   xtrans-dev zlib1g-dev
1187s 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded.
1187s Need to get 122 MB/122 MB of archives.
1187s After this operation, 695 MB of additional disk space will be used.
1187s Get:1 /tmp/autopkgtest.w6oqoF/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [760 B]
1188s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB]
1188s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x libmotif-common all 2.3.8-3 [11.0 kB]
1188s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB]
1190s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
1191s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
1193s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB]
1193s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB]
1193s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB]
1193s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
1193s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB]
1193s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB]
1193s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x libice6 s390x 2:1.0.10-1build2 [40.8 kB]
1194s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x libsm6 s390x 2:1.2.3-1build2 [16.9 kB]
1194s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x libxt6 s390x 1:1.2.1-1.1 [166 kB]
1194s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libxmu6 s390x 2:1.1.3-3 [49.3 kB]
1194s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x libxm4 s390x 2.3.8-3 [904 kB]
1195s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x libmrm4 s390x 2.3.8-3 [53.2 kB]
1195s Get:19 http://ftpmaster.internal/ubuntu noble/universe s390x libuil4 s390x 2.3.8-3 [120 kB]
1195s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libbrotli-dev s390x 1.1.0-2 [393 kB]
1196s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu6 [20.2 kB]
1196s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB]
1197s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB]
1197s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB]
1197s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu6 [1629 kB]
1199s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libbz2-dev s390x 1.0.8-5ubuntu1 [39.4 kB]
1199s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-amdgpu1 s390x 2.4.120-2 [21.1 kB]
1199s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-nouveau2 s390x 2.4.120-2 [18.5 kB]
1199s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-radeon1 s390x 2.4.120-2 [22.7 kB]
1199s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libexpat1-dev s390x 2.6.0-1 [1013 kB]
1200s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB]
1201s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libpng-dev s390x 1.6.43-1 [277 kB]
1201s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype-dev s390x 2.13.2+dfsg-1 [604 kB]
1201s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x uuid-dev s390x 2.39.3-6ubuntu2 [34.2 kB]
1201s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libpkgconf3 s390x 1.8.1-2 [30.4 kB]
1202s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf-bin s390x 1.8.1-2 [20.8 kB]
1202s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x pkgconf s390x 1.8.1-2 [16.7 kB]
1202s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig-dev s390x 2.15.0-1ubuntu1 [172 kB]
1202s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1-dev s390x 2.15.0-1ubuntu1 [1830 B]
1202s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libglvnd0 s390x 1.7.0-1 [106 kB]
1202s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x libglapi-mesa s390x 24.0.1-1ubuntu1 [68.7 kB]
1202s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libx11-xcb1 s390x 2:1.8.7-1 [7778 B]
1202s Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri2-0 s390x 1.15-1 [7426 B]
1202s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri3-0 s390x 1.15-1 [7270 B]
1202s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-glx0 s390x 1.15-1 [25.8 kB]
1202s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-present0 s390x 1.15-1 [5752 B]
1202s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-randr0 s390x 1.15-1 [19.0 kB]
1202s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B]
1202s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-sync1 s390x 1.15-1 [9392 B]
1202s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xfixes0 s390x 1.15-1 [10.5 kB]
1202s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x libxfixes3 s390x 1:6.0.0-2 [10.6 kB]
1202s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libxshmfence1 s390x 1.3-1build4 [5334 B]
1202s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libxxf86vm1 s390x 1:1.1.4-1build3 [9900 B]
1202s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libvulkan1 s390x 1.3.275.0-1 [155 kB]
1202s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libllvm17 s390x 1:17.0.6-5build1 [31.2 MB]
1239s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x libgl1-mesa-dri s390x 24.0.1-1ubuntu1 [7184 kB]
1248s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libglx-mesa0 s390x 24.0.1-1ubuntu1 [182 kB]
1248s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libglx0 s390x 1.7.0-1 [31.4 kB]
1248s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libgl1 s390x 1.7.0-1 [137 kB]
1248s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x xorg-sgml-doctools all 1:1.11-1.1 [10.9 kB]
1248s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x x11proto-dev all 2023.2-1 [602 kB]
1249s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libxau-dev s390x 1:1.0.9-1build5 [9702 B]
1249s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libxdmcp-dev s390x 1:1.1.3-0ubuntu5 [26.5 kB]
1249s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x xtrans-dev all 1.4.0-1 [68.9 kB]
1249s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libpthread-stubs0-dev s390x 0.4-1build2 [5508 B]
1249s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libxcb1-dev s390x 1.15-1 [86.5 kB]
1249s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libx11-dev s390x 2:1.8.7-1 [758 kB]
1249s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libglx-dev s390x 1.7.0-1 [14.2 kB]
1249s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libgl-dev s390x 1.7.0-1 [102 kB]
1250s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libopengl0 s390x 1.7.0-1 [45.9 kB]
1250s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libglu1-mesa s390x 9.0.2-1.1 [145 kB]
1250s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libopengl-dev s390x 1.7.0-1 [3438 B]
1250s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libglu1-mesa-dev s390x 9.0.2-1.1 [228 kB]
1250s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libice-dev s390x 2:1.0.10-1build2 [49.3 kB]
1250s Get:75 http://ftpmaster.internal/ubuntu noble/universe s390x ncbi-data all 6.1.20170106+dfsg1-10 [4395 kB]
1252s Get:76 http://ftpmaster.internal/ubuntu noble/universe s390x libncbi6 s390x 6.1.20170106+dfsg1-10 [4257 kB]
1256s Get:77 http://ftpmaster.internal/ubuntu noble/universe s390x libncbi6-dev s390x 6.1.20170106+dfsg1-10 [5868 kB]
1264s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libsm-dev s390x 2:1.2.3-1build2 [18.4 kB]
1264s Get:79 http://ftpmaster.internal/ubuntu noble/main s390x libxrender-dev s390x 1:0.9.10-1.1 [25.8 kB]
1264s Get:80 http://ftpmaster.internal/ubuntu noble/main s390x libxft-dev s390x 2.3.6-1 [64.0 kB]
1264s Get:81 http://ftpmaster.internal/ubuntu noble/main s390x libxt-dev s390x 1:1.2.1-1.1 [391 kB]
1265s Get:82 http://ftpmaster.internal/ubuntu noble/universe s390x uil s390x 2.3.8-3 [7276 B]
1265s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libmotif-dev s390x 2.3.8-3 [2357 kB]
1267s Get:84 http://ftpmaster.internal/ubuntu noble/universe s390x libvibrant6b s390x 6.1.20170106+dfsg1-10 [1304 kB]
1269s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libxext-dev s390x 2:1.3.4-1build1 [83.4 kB]
1269s Get:86 http://ftpmaster.internal/ubuntu noble/main s390x libxmu-headers all 2:1.1.3-3 [54.1 kB]
1269s Get:87 http://ftpmaster.internal/ubuntu noble/main s390x libxmu-dev s390x 2:1.1.3-3 [54.2 kB]
1269s Get:88 http://ftpmaster.internal/ubuntu noble/universe s390x libvibrant6-dev s390x 6.1.20170106+dfsg1-10 [1610 kB]
1271s Get:89 http://ftpmaster.internal/ubuntu noble/universe s390x ncbi-cn3d s390x 3.0.20170106+dfsg1-10 [9862 B]
1271s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x ncbi-rrna-data all 6.1.20170106+dfsg1-10 [46.3 MB]
1310s Get:91 http://ftpmaster.internal/ubuntu noble/universe s390x ncbi-tools-bin s390x 6.1.20170106+dfsg1-10 [1887 kB]
1311s Get:92 http://ftpmaster.internal/ubuntu noble/universe s390x ncbi-tools-x11 s390x 6.1.20170106+dfsg1-10 [990 kB]
1312s Fetched 122 MB in 2min 4s (981 kB/s)
1312s Selecting previously unselected package x11-common.
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1312s Preparing to unpack .../x11-common_1%3a7.7+23ubuntu2_all.deb ...
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1312s Setting up x11-common (1:7.7+23ubuntu2) ...
1312s Selecting previously unselected package libmotif-common.
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1312s Preparing to unpack .../00-libmotif-common_2.3.8-3_all.deb ...
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1312s Selecting previously unselected package libfreetype6:s390x.
1312s Preparing to unpack .../01-libfreetype6_2.13.2+dfsg-1_s390x.deb ...
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1312s Selecting previously unselected package fonts-dejavu-mono.
1312s Preparing to unpack .../02-fonts-dejavu-mono_2.37-8_all.deb ...
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1312s Selecting previously unselected package fonts-dejavu-core.
1312s Preparing to unpack .../03-fonts-dejavu-core_2.37-8_all.deb ...
1312s Unpacking fonts-dejavu-core (2.37-8) ...
1312s Selecting previously unselected package fontconfig-config.
1312s Preparing to unpack .../04-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ...
1312s Unpacking fontconfig-config (2.15.0-1ubuntu1) ...
1313s Selecting previously unselected package libfontconfig1:s390x.
1313s Preparing to unpack .../05-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ...
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1313s Selecting previously unselected package libjpeg-turbo8:s390x.
1313s Preparing to unpack .../06-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ...
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1313s Selecting previously unselected package libjpeg8:s390x.
1313s Preparing to unpack .../07-libjpeg8_8c-2ubuntu11_s390x.deb ...
1313s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
1313s Selecting previously unselected package libxrender1:s390x.
1313s Preparing to unpack .../08-libxrender1_1%3a0.9.10-1.1_s390x.deb ...
1313s Unpacking libxrender1:s390x (1:0.9.10-1.1) ...
1313s Selecting previously unselected package libxft2:s390x.
1313s Preparing to unpack .../09-libxft2_2.3.6-1_s390x.deb ...
1313s Unpacking libxft2:s390x (2.3.6-1) ...
1313s Selecting previously unselected package libice6:s390x.
1313s Preparing to unpack .../10-libice6_2%3a1.0.10-1build2_s390x.deb ...
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1313s Selecting previously unselected package libxmu6:s390x.
1313s Preparing to unpack .../13-libxmu6_2%3a1.1.3-3_s390x.deb ...
1313s Unpacking libxmu6:s390x (2:1.1.3-3) ...
1313s Selecting previously unselected package libxm4:s390x.
1313s Preparing to unpack .../14-libxm4_2.3.8-3_s390x.deb ...
1313s Unpacking libxm4:s390x (2.3.8-3) ...
1313s Selecting previously unselected package libmrm4:s390x.
1313s Preparing to unpack .../15-libmrm4_2.3.8-3_s390x.deb ...
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1313s Selecting previously unselected package libuil4:s390x.
1313s Preparing to unpack .../16-libuil4_2.3.8-3_s390x.deb ...
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1313s Selecting previously unselected package libbrotli-dev:s390x.
1313s Preparing to unpack .../17-libbrotli-dev_1.1.0-2_s390x.deb ...
1313s Unpacking libbrotli-dev:s390x (1.1.0-2) ...
1313s Selecting previously unselected package libc-dev-bin.
1313s Preparing to unpack .../18-libc-dev-bin_2.39-0ubuntu6_s390x.deb ...
1313s Unpacking libc-dev-bin (2.39-0ubuntu6) ...
1313s Selecting previously unselected package linux-libc-dev:s390x.
1313s Preparing to unpack .../19-linux-libc-dev_6.8.0-11.11_s390x.deb ...
1313s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ...
1313s Selecting previously unselected package libcrypt-dev:s390x.
1313s Preparing to unpack .../20-libcrypt-dev_1%3a4.4.36-4_s390x.deb ...
1313s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ...
1313s Selecting previously unselected package rpcsvc-proto.
1313s Preparing to unpack .../21-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ...
1313s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ...
1313s Selecting previously unselected package libc6-dev:s390x.
1313s Preparing to unpack .../22-libc6-dev_2.39-0ubuntu6_s390x.deb ...
1313s Unpacking libc6-dev:s390x (2.39-0ubuntu6) ...
1313s Selecting previously unselected package libbz2-dev:s390x.
1313s Preparing to unpack .../23-libbz2-dev_1.0.8-5ubuntu1_s390x.deb ...
1313s Unpacking libbz2-dev:s390x (1.0.8-5ubuntu1) ...
1313s Selecting previously unselected package libdrm-amdgpu1:s390x.
1313s Preparing to unpack .../24-libdrm-amdgpu1_2.4.120-2_s390x.deb ...
1313s Unpacking libdrm-amdgpu1:s390x (2.4.120-2) ...
1313s Selecting previously unselected package libdrm-nouveau2:s390x.
1313s Preparing to unpack .../25-libdrm-nouveau2_2.4.120-2_s390x.deb ...
1313s Unpacking libdrm-nouveau2:s390x (2.4.120-2) ...
1313s Selecting previously unselected package libdrm-radeon1:s390x.
1313s Preparing to unpack .../26-libdrm-radeon1_2.4.120-2_s390x.deb ...
1313s Unpacking libdrm-radeon1:s390x (2.4.120-2) ...
1313s Selecting previously unselected package libexpat1-dev:s390x.
1313s Preparing to unpack .../27-libexpat1-dev_2.6.0-1_s390x.deb ...
1313s Unpacking libexpat1-dev:s390x (2.6.0-1) ...
1313s Selecting previously unselected package zlib1g-dev:s390x.
1313s Preparing to unpack .../28-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ...
1313s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ...
1313s Selecting previously unselected package libpng-dev:s390x.
1313s Preparing to unpack .../29-libpng-dev_1.6.43-1_s390x.deb ...
1313s Unpacking libpng-dev:s390x (1.6.43-1) ...
1313s Selecting previously unselected package libfreetype-dev:s390x.
1313s Preparing to unpack .../30-libfreetype-dev_2.13.2+dfsg-1_s390x.deb ...
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1313s Selecting previously unselected package uuid-dev:s390x.
1313s Preparing to unpack .../31-uuid-dev_2.39.3-6ubuntu2_s390x.deb ...
1313s Unpacking uuid-dev:s390x (2.39.3-6ubuntu2) ...
1313s Selecting previously unselected package libpkgconf3:s390x.
1313s Preparing to unpack .../32-libpkgconf3_1.8.1-2_s390x.deb ...
1313s Unpacking libpkgconf3:s390x (1.8.1-2) ...
1313s Selecting previously unselected package pkgconf-bin.
1313s Preparing to unpack .../33-pkgconf-bin_1.8.1-2_s390x.deb ...
1313s Unpacking pkgconf-bin (1.8.1-2) ...
1313s Selecting previously unselected package pkgconf:s390x.
1313s Preparing to unpack .../34-pkgconf_1.8.1-2_s390x.deb ...
1313s Unpacking pkgconf:s390x (1.8.1-2) ...
1313s Selecting previously unselected package libfontconfig-dev:s390x.
1313s Preparing to unpack .../35-libfontconfig-dev_2.15.0-1ubuntu1_s390x.deb ...
1313s Unpacking libfontconfig-dev:s390x (2.15.0-1ubuntu1) ...
1313s Selecting previously unselected package libfontconfig1-dev:s390x.
1313s Preparing to unpack .../36-libfontconfig1-dev_2.15.0-1ubuntu1_s390x.deb ...
1313s Unpacking libfontconfig1-dev:s390x (2.15.0-1ubuntu1) ...
1313s Selecting previously unselected package libglvnd0:s390x.
1313s Preparing to unpack .../37-libglvnd0_1.7.0-1_s390x.deb ...
1313s Unpacking libglvnd0:s390x (1.7.0-1) ...
1313s Selecting previously unselected package libglapi-mesa:s390x.
1313s Preparing to unpack .../38-libglapi-mesa_24.0.1-1ubuntu1_s390x.deb ...
1313s Unpacking libglapi-mesa:s390x (24.0.1-1ubuntu1) ...
1313s Selecting previously unselected package libx11-xcb1:s390x.
1313s Preparing to unpack .../39-libx11-xcb1_2%3a1.8.7-1_s390x.deb ...
1313s Unpacking libx11-xcb1:s390x (2:1.8.7-1) ...
1313s Selecting previously unselected package libxcb-dri2-0:s390x.
1313s Preparing to unpack .../40-libxcb-dri2-0_1.15-1_s390x.deb ...
1313s Unpacking libxcb-dri2-0:s390x (1.15-1) ...
1313s Selecting previously unselected package libxcb-dri3-0:s390x.
1313s Preparing to unpack .../41-libxcb-dri3-0_1.15-1_s390x.deb ...
1313s Unpacking libxcb-dri3-0:s390x (1.15-1) ...
1313s Selecting previously unselected package libxcb-glx0:s390x.
1313s Preparing to unpack .../42-libxcb-glx0_1.15-1_s390x.deb ...
1313s Unpacking libxcb-glx0:s390x (1.15-1) ...
1314s Selecting previously unselected package libxcb-present0:s390x.
1314s Preparing to unpack .../43-libxcb-present0_1.15-1_s390x.deb ...
1314s Unpacking libxcb-present0:s390x (1.15-1) ...
1314s Selecting previously unselected package libxcb-randr0:s390x.
1314s Preparing to unpack .../44-libxcb-randr0_1.15-1_s390x.deb ...
1314s Unpacking libxcb-randr0:s390x (1.15-1) ...
1314s Selecting previously unselected package libxcb-shm0:s390x.
1314s Preparing to unpack .../45-libxcb-shm0_1.15-1_s390x.deb ...
1314s Unpacking libxcb-shm0:s390x (1.15-1) ...
1314s Selecting previously unselected package libxcb-sync1:s390x.
1314s Preparing to unpack .../46-libxcb-sync1_1.15-1_s390x.deb ...
1314s Unpacking libxcb-sync1:s390x (1.15-1) ...
1314s Selecting previously unselected package libxcb-xfixes0:s390x.
1314s Preparing to unpack .../47-libxcb-xfixes0_1.15-1_s390x.deb ...
1314s Unpacking libxcb-xfixes0:s390x (1.15-1) ...
1314s Selecting previously unselected package libxfixes3:s390x.
1314s Preparing to unpack .../48-libxfixes3_1%3a6.0.0-2_s390x.deb ...
1314s Unpacking libxfixes3:s390x (1:6.0.0-2) ...
1314s Selecting previously unselected package libxshmfence1:s390x.
1314s Preparing to unpack .../49-libxshmfence1_1.3-1build4_s390x.deb ...
1314s Unpacking libxshmfence1:s390x (1.3-1build4) ...
1314s Selecting previously unselected package libxxf86vm1:s390x.
1314s Preparing to unpack .../50-libxxf86vm1_1%3a1.1.4-1build3_s390x.deb ...
1314s Unpacking libxxf86vm1:s390x (1:1.1.4-1build3) ...
1314s Selecting previously unselected package libvulkan1:s390x.
1314s Preparing to unpack .../51-libvulkan1_1.3.275.0-1_s390x.deb ...
1314s Unpacking libvulkan1:s390x (1.3.275.0-1) ...
1314s Selecting previously unselected package libllvm17:s390x.
1314s Preparing to unpack .../52-libllvm17_1%3a17.0.6-5build1_s390x.deb ...
1314s Unpacking libllvm17:s390x (1:17.0.6-5build1) ...
1315s Selecting previously unselected package libgl1-mesa-dri:s390x.
1315s Preparing to unpack .../53-libgl1-mesa-dri_24.0.1-1ubuntu1_s390x.deb ...
1315s Unpacking libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ...
1315s Selecting previously unselected package libglx-mesa0:s390x.
1315s Preparing to unpack .../54-libglx-mesa0_24.0.1-1ubuntu1_s390x.deb ...
1315s Unpacking libglx-mesa0:s390x (24.0.1-1ubuntu1) ...
1315s Selecting previously unselected package libglx0:s390x.
1315s Preparing to unpack .../55-libglx0_1.7.0-1_s390x.deb ...
1315s Unpacking libglx0:s390x (1.7.0-1) ...
1315s Selecting previously unselected package libgl1:s390x.
1315s Preparing to unpack .../56-libgl1_1.7.0-1_s390x.deb ...
1315s Unpacking libgl1:s390x (1.7.0-1) ...
1315s Selecting previously unselected package xorg-sgml-doctools.
1315s Preparing to unpack .../57-xorg-sgml-doctools_1%3a1.11-1.1_all.deb ...
1315s Unpacking xorg-sgml-doctools (1:1.11-1.1) ...
1315s Selecting previously unselected package x11proto-dev.
1315s Preparing to unpack .../58-x11proto-dev_2023.2-1_all.deb ...
1315s Unpacking x11proto-dev (2023.2-1) ...
1315s Selecting previously unselected package libxau-dev:s390x.
1315s Preparing to unpack .../59-libxau-dev_1%3a1.0.9-1build5_s390x.deb ...
1315s Unpacking libxau-dev:s390x (1:1.0.9-1build5) ...
1315s Selecting previously unselected package libxdmcp-dev:s390x.
1315s Preparing to unpack .../60-libxdmcp-dev_1%3a1.1.3-0ubuntu5_s390x.deb ...
1315s Unpacking libxdmcp-dev:s390x (1:1.1.3-0ubuntu5) ...
1315s Selecting previously unselected package xtrans-dev.
1315s Preparing to unpack .../61-xtrans-dev_1.4.0-1_all.deb ...
1315s Unpacking xtrans-dev (1.4.0-1) ...
1315s Selecting previously unselected package libpthread-stubs0-dev:s390x.
1315s Preparing to unpack .../62-libpthread-stubs0-dev_0.4-1build2_s390x.deb ...
1315s Unpacking libpthread-stubs0-dev:s390x (0.4-1build2) ...
1315s Selecting previously unselected package libxcb1-dev:s390x.
1315s Preparing to unpack .../63-libxcb1-dev_1.15-1_s390x.deb ...
1315s Unpacking libxcb1-dev:s390x (1.15-1) ...
1315s Selecting previously unselected package libx11-dev:s390x.
1315s Preparing to unpack .../64-libx11-dev_2%3a1.8.7-1_s390x.deb ...
1315s Unpacking libx11-dev:s390x (2:1.8.7-1) ...
1315s Selecting previously unselected package libglx-dev:s390x.
1315s Preparing to unpack .../65-libglx-dev_1.7.0-1_s390x.deb ...
1315s Unpacking libglx-dev:s390x (1.7.0-1) ...
1315s Selecting previously unselected package libgl-dev:s390x.
1315s Preparing to unpack .../66-libgl-dev_1.7.0-1_s390x.deb ...
1315s Unpacking libgl-dev:s390x (1.7.0-1) ...
1315s Selecting previously unselected package libopengl0:s390x.
1315s Preparing to unpack .../67-libopengl0_1.7.0-1_s390x.deb ...
1315s Unpacking libopengl0:s390x (1.7.0-1) ...
1315s Selecting previously unselected package libglu1-mesa:s390x.
1315s Preparing to unpack .../68-libglu1-mesa_9.0.2-1.1_s390x.deb ...
1315s Unpacking libglu1-mesa:s390x (9.0.2-1.1) ...
1315s Selecting previously unselected package libopengl-dev:s390x.
1315s Preparing to unpack .../69-libopengl-dev_1.7.0-1_s390x.deb ...
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1315s Selecting previously unselected package libglu1-mesa-dev:s390x.
1315s Preparing to unpack .../70-libglu1-mesa-dev_9.0.2-1.1_s390x.deb ...
1315s Unpacking libglu1-mesa-dev:s390x (9.0.2-1.1) ...
1315s Selecting previously unselected package libice-dev:s390x.
1315s Preparing to unpack .../71-libice-dev_2%3a1.0.10-1build2_s390x.deb ...
1315s Unpacking libice-dev:s390x (2:1.0.10-1build2) ...
1315s Selecting previously unselected package ncbi-data.
1315s Preparing to unpack .../72-ncbi-data_6.1.20170106+dfsg1-10_all.deb ...
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1316s Preparing to unpack .../73-libncbi6_6.1.20170106+dfsg1-10_s390x.deb ...
1316s Unpacking libncbi6:s390x (6.1.20170106+dfsg1-10) ...
1316s Selecting previously unselected package libncbi6-dev:s390x.
1316s Preparing to unpack .../74-libncbi6-dev_6.1.20170106+dfsg1-10_s390x.deb ...
1316s Unpacking libncbi6-dev:s390x (6.1.20170106+dfsg1-10) ...
1316s Selecting previously unselected package libsm-dev:s390x.
1316s Preparing to unpack .../75-libsm-dev_2%3a1.2.3-1build2_s390x.deb ...
1316s Unpacking libsm-dev:s390x (2:1.2.3-1build2) ...
1316s Selecting previously unselected package libxrender-dev:s390x.
1316s Preparing to unpack .../76-libxrender-dev_1%3a0.9.10-1.1_s390x.deb ...
1316s Unpacking libxrender-dev:s390x (1:0.9.10-1.1) ...
1316s Selecting previously unselected package libxft-dev:s390x.
1316s Preparing to unpack .../77-libxft-dev_2.3.6-1_s390x.deb ...
1316s Unpacking libxft-dev:s390x (2.3.6-1) ...
1316s Selecting previously unselected package libxt-dev:s390x.
1316s Preparing to unpack .../78-libxt-dev_1%3a1.2.1-1.1_s390x.deb ...
1316s Unpacking libxt-dev:s390x (1:1.2.1-1.1) ...
1316s Selecting previously unselected package uil.
1316s Preparing to unpack .../79-uil_2.3.8-3_s390x.deb ...
1316s Unpacking uil (2.3.8-3) ...
1316s Selecting previously unselected package libmotif-dev:s390x.
1316s Preparing to unpack .../80-libmotif-dev_2.3.8-3_s390x.deb ...
1316s Unpacking libmotif-dev:s390x (2.3.8-3) ...
1316s Selecting previously unselected package libvibrant6b:s390x.
1316s Preparing to unpack .../81-libvibrant6b_6.1.20170106+dfsg1-10_s390x.deb ...
1316s Unpacking libvibrant6b:s390x (6.1.20170106+dfsg1-10) ...
1316s Selecting previously unselected package libxext-dev:s390x.
1316s Preparing to unpack .../82-libxext-dev_2%3a1.3.4-1build1_s390x.deb ...
1316s Unpacking libxext-dev:s390x (2:1.3.4-1build1) ...
1316s Selecting previously unselected package libxmu-headers.
1316s Preparing to unpack .../83-libxmu-headers_2%3a1.1.3-3_all.deb ...
1316s Unpacking libxmu-headers (2:1.1.3-3) ...
1316s Selecting previously unselected package libxmu-dev:s390x.
1316s Preparing to unpack .../84-libxmu-dev_2%3a1.1.3-3_s390x.deb ...
1316s Unpacking libxmu-dev:s390x (2:1.1.3-3) ...
1316s Selecting previously unselected package libvibrant6-dev:s390x.
1316s Preparing to unpack .../85-libvibrant6-dev_6.1.20170106+dfsg1-10_s390x.deb ...
1316s Unpacking libvibrant6-dev:s390x (6.1.20170106+dfsg1-10) ...
1317s Selecting previously unselected package ncbi-cn3d.
1317s Preparing to unpack .../86-ncbi-cn3d_3.0.20170106+dfsg1-10_s390x.deb ...
1317s Unpacking ncbi-cn3d (3.0.20170106+dfsg1-10) ...
1317s Selecting previously unselected package ncbi-rrna-data.
1317s Preparing to unpack .../87-ncbi-rrna-data_6.1.20170106+dfsg1-10_all.deb ...
1317s Unpacking ncbi-rrna-data (6.1.20170106+dfsg1-10) ...
1323s Selecting previously unselected package ncbi-tools-bin.
1323s Preparing to unpack .../88-ncbi-tools-bin_6.1.20170106+dfsg1-10_s390x.deb ...
1323s Unpacking ncbi-tools-bin (6.1.20170106+dfsg1-10) ...
1323s Selecting previously unselected package ncbi-tools-x11.
1323s Preparing to unpack .../89-ncbi-tools-x11_6.1.20170106+dfsg1-10_s390x.deb ...
1323s Unpacking ncbi-tools-x11 (6.1.20170106+dfsg1-10) ...
1323s Selecting previously unselected package autopkgtest-satdep.
1323s Preparing to unpack .../90-1-autopkgtest-satdep.deb ...
1323s Unpacking autopkgtest-satdep (0) ...
1323s Setting up libxcb-dri3-0:s390x (1.15-1) ...
1323s Setting up ncbi-data (6.1.20170106+dfsg1-10) ...
1323s Setting up libx11-xcb1:s390x (2:1.8.7-1) ...
1323s Setting up libice6:s390x (2:1.0.10-1build2) ...
1323s Setting up libdrm-nouveau2:s390x (2.4.120-2) ...
1323s Setting up libxcb-xfixes0:s390x (1.15-1) ...
1323s Setting up libxrender1:s390x (1:0.9.10-1.1) ...
1323s Setting up libdrm-radeon1:s390x (2.4.120-2) ...
1323s Setting up libglvnd0:s390x (1.7.0-1) ...
1323s Setting up libxcb-glx0:s390x (1.15-1) ...
1323s Setting up linux-libc-dev:s390x (6.8.0-11.11) ...
1323s Setting up libxcb-shm0:s390x (1.15-1) ...
1323s Setting up libmotif-common (2.3.8-3) ...
1323s Setting up libpthread-stubs0-dev:s390x (0.4-1build2) ...
1323s Setting up libopengl0:s390x (1.7.0-1) ...
1323s Setting up libxxf86vm1:s390x (1:1.1.4-1build3) ...
1323s Setting up libxcb-present0:s390x (1.15-1) ...
1323s Setting up xtrans-dev (1.4.0-1) ...
1323s Setting up libpkgconf3:s390x (1.8.1-2) ...
1323s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ...
1323s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ...
1323s Setting up libxfixes3:s390x (1:6.0.0-2) ...
1323s Setting up libxcb-sync1:s390x (1.15-1) ...
1323s Setting up fonts-dejavu-mono (2.37-8) ...
1323s Setting up fonts-dejavu-core (2.37-8) ...
1323s Setting up pkgconf-bin (1.8.1-2) ...
1323s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ...
1323s Setting up libglapi-mesa:s390x (24.0.1-1ubuntu1) ...
1323s Setting up libvulkan1:s390x (1.3.275.0-1) ...
1323s Setting up libxcb-dri2-0:s390x (1.15-1) ...
1323s Setting up libxshmfence1:s390x (1.3-1build4) ...
1323s Setting up libcrypt-dev:s390x (1:4.4.36-4) ...
1323s Setting up libxcb-randr0:s390x (1.15-1) ...
1323s Setting up xorg-sgml-doctools (1:1.11-1.1) ...
1323s Setting up libglu1-mesa:s390x (9.0.2-1.1) ...
1323s Setting up libopengl-dev:s390x (1.7.0-1) ...
1323s Setting up libc-dev-bin (2.39-0ubuntu6) ...
1323s Setting up libllvm17:s390x (1:17.0.6-5build1) ...
1323s Setting up libsm6:s390x (2:1.2.3-1build2) ...
1323s Setting up libbrotli-dev:s390x (1.1.0-2) ...
1323s Setting up ncbi-rrna-data (6.1.20170106+dfsg1-10) ...
1323s Setting up libdrm-amdgpu1:s390x (2.4.120-2) ...
1323s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
1323s Setting up libncbi6:s390x (6.1.20170106+dfsg1-10) ...
1323s Setting up x11proto-dev (2023.2-1) ...
1323s Setting up libncbi6-dev:s390x (6.1.20170106+dfsg1-10) ...
1323s Setting up libxau-dev:s390x (1:1.0.9-1build5) ...
1323s Setting up libice-dev:s390x (2:1.0.10-1build2) ...
1323s Setting up libsm-dev:s390x (2:1.2.3-1build2) ...
1323s Setting up fontconfig-config (2.15.0-1ubuntu1) ...
1323s Setting up libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ...
1323s Setting up pkgconf:s390x (1.8.1-2) ...
1323s Setting up libxdmcp-dev:s390x (1:1.1.3-0ubuntu5) ...
1323s Setting up libxt6:s390x (1:1.2.1-1.1) ...
1323s Setting up ncbi-tools-bin (6.1.20170106+dfsg1-10) ...
1323s Setting up libc6-dev:s390x (2.39-0ubuntu6) ...
1323s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ...
1323s Setting up libbz2-dev:s390x (1.0.8-5ubuntu1) ...
1323s Setting up libxft2:s390x (2.3.6-1) ...
1323s Setting up libxmu6:s390x (2:1.1.3-3) ...
1323s Setting up libglx-mesa0:s390x (24.0.1-1ubuntu1) ...
1323s Setting up libxcb1-dev:s390x (1.15-1) ...
1323s Setting up libglx0:s390x (1.7.0-1) ...
1323s Setting up libx11-dev:s390x (2:1.8.7-1) ...
1323s Setting up libgl1:s390x (1.7.0-1) ...
1323s Setting up libexpat1-dev:s390x (2.6.0-1) ...
1323s Setting up libxt-dev:s390x (1:1.2.1-1.1) ...
1323s Setting up uuid-dev:s390x (2.39.3-6ubuntu2) ...
1323s Setting up libxext-dev:s390x (2:1.3.4-1build1) ...
1323s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ...
1323s Setting up libglx-dev:s390x (1.7.0-1) ...
1323s Setting up libxrender-dev:s390x (1:0.9.10-1.1) ...
1323s Setting up libgl-dev:s390x (1.7.0-1) ...
1323s Setting up libxm4:s390x (2.3.8-3) ...
1323s Setting up libxmu-headers (2:1.1.3-3) ...
1323s Setting up libpng-dev:s390x (1.6.43-1) ...
1323s Setting up libvibrant6b:s390x (6.1.20170106+dfsg1-10) ...
1323s Setting up libxmu-dev:s390x (2:1.1.3-3) ...
1323s Setting up libfreetype-dev:s390x (2.13.2+dfsg-1) ...
1323s Setting up libmrm4:s390x (2.3.8-3) ...
1323s Setting up libglu1-mesa-dev:s390x (9.0.2-1.1) ...
1323s Setting up libuil4:s390x (2.3.8-3) ...
1323s Setting up uil (2.3.8-3) ...
1323s Setting up ncbi-cn3d (3.0.20170106+dfsg1-10) ...
1323s update-alternatives: using /usr/bin/Cn3D-3.0 to provide /usr/bin/Cn3D (Cn3D) in auto mode
1323s Setting up libfontconfig-dev:s390x (2.15.0-1ubuntu1) ...
1323s Setting up ncbi-tools-x11 (6.1.20170106+dfsg1-10) ...
1323s Setting up libxft-dev:s390x (2.3.6-1) ...
1323s Setting up libfontconfig1-dev:s390x (2.15.0-1ubuntu1) ...
1323s Setting up libmotif-dev:s390x (2.3.8-3) ...
1323s Setting up libvibrant6-dev:s390x (6.1.20170106+dfsg1-10) ...
1323s Setting up autopkgtest-satdep (0) ...
1323s Processing triggers for man-db (2.12.0-3) ...
1324s Processing triggers for libc-bin (2.39-0ubuntu6) ...
1330s (Reading database ... 56910 files and directories currently installed.)
1330s Removing autopkgtest-satdep (0) ...
1330s autopkgtest [00:30:48]: test run-unit-test: [-----------------------
1331s ---asn2asn test---
1331s ---asn2all test---
1332s ---asn2fsa test---
1332s ---asn2gb test---
1333s ---asn2idx test---
1333s ---asn2xml test---
1334s ---cleanasn test---
1334s ---gene2xml test---
1336s ---vecscreen test---
1340s ---asndisc test---
1343s ---asnval test---
1344s ---asnmacro test---
1348s ---asntool test---
1348s ---indexpub test---
1348s ---getpub test---
1348s ---getmesh test---
1348s ---debruijn test---
1348s ---gil2bin test---
1348s ---makeset test---
1348s ---nps2gps test---
1348s ---tbl2asn test---
1348s [nps2gps] Processing X66994.1 (idfetch_g1234.npset)
1348s ---checksub test---
1348s ---fa2htgs test---
1348s ---subfuse test---
1348s [subfuse] Processing checksub
1348s 
1348s [subfuse] Processing Sc_16
1348s 
1348s ---trna2sap test---
1348s ---trna2tbl test---
1348s ---spidey test---
1349s autopkgtest [00:31:07]: test run-unit-test: -----------------------]
1349s autopkgtest [00:31:07]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
1349s run-unit-test        PASS
1350s autopkgtest [00:31:08]: @@@@@@@@@@@@@@@@@@@@ summary
1350s run-unit-test        PASS
1371s Creating nova instance adt-noble-s390x-ncbi-tools6-20240326-000838-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-s390x-server-20240325.img (UUID 9f25d9bc-613c-4979-9452-2ea8e4d84cd0)...