0s autopkgtest [17:13:48]: starting date and time: 2024-03-16 17:13:48+0000 0s autopkgtest [17:13:48]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:13:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.rjclq54y/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lammps,src:curl,src:db5.3,src:hdf5,src:libpng1.6,src:libpsl,src:netcdf,src:openmpi,src:openssl,src:orthanc-python,src:pmix,src:python3.12,src:readline,src:vtk9,src:wp2latex --apt-upgrade lammps --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=lammps/20240207+dfsg-1.1build2 curl/8.5.0-2ubuntu7 db5.3/5.3.28+dfsg2-5build1 hdf5/1.10.10+repack-3.1ubuntu3 libpng1.6/1.6.43-3 libpsl/0.21.2-1.1 netcdf/1:4.9.2-5ubuntu3 openmpi/4.1.6-6ubuntu1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3 pmix/5.0.1-4.1 python3.12/3.12.2-4build2 readline/8.2-3.1 vtk9/9.1.0+really9.1.0+dfsg2-7.1build2 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-12.secgroup --name adt-noble-s390x-lammps-20240316-171348-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 312s autopkgtest [17:19:00]: testbed dpkg architecture: s390x 312s autopkgtest [17:19:00]: testbed apt version: 2.7.12 312s autopkgtest [17:19:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup 313s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 313s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 313s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3673 kB] 314s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 314s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [474 kB] 314s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 314s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 314s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 314s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 314s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3736 kB] 314s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 314s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.5 kB] 314s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 316s Fetched 8735 kB in 2s (3505 kB/s) 316s Reading package lists... 319s Reading package lists... 319s Building dependency tree... 319s Reading state information... 319s Calculating upgrade... 319s The following packages will be REMOVED: 319s libreadline8 libssl3 319s The following NEW packages will be installed: 319s libreadline8t64 libssl3t64 319s The following packages have been kept back: 319s curl libpython3.12-minimal libpython3.12-stdlib python3.12 319s python3.12-minimal 319s The following packages will be upgraded: 319s openssl readline-common ubuntu-minimal ubuntu-standard 319s 4 upgraded, 2 newly installed, 2 to remove and 5 not upgraded. 319s Need to get 2906 kB of archives. 319s After this operation, 42.0 kB of additional disk space will be used. 319s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-3.1 [56.4 kB] 320s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-3.1 [171 kB] 320s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 320s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 320s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 320s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 320s Fetched 2906 kB in 1s (4318 kB/s) 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 320s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 320s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 320s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested: 320s parted depends on libreadline8 (>= 6.0). 320s libpython3.12-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 320s libpython3.11-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 320s gpgsm depends on libreadline8 (>= 6.0). 320s gpgconf depends on libreadline8 (>= 6.0). 320s gpg depends on libreadline8 (>= 6.0). 320s gawk depends on libreadline8 (>= 6.0). 320s fdisk depends on libreadline8 (>= 6.0). 320s 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 320s Removing libreadline8:s390x (8.2-3) ... 320s Selecting previously unselected package libreadline8t64:s390x. 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52159 files and directories currently installed.) 320s Preparing to unpack .../libreadline8t64_8.2-3.1_s390x.deb ... 320s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 320s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 320s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 320s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 320s Unpacking libreadline8t64:s390x (8.2-3.1) ... 320s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 320s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 320s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 320s wget depends on libssl3 (>= 3.0.0). 320s tnftp depends on libssl3 (>= 3.0.0). 320s tcpdump depends on libssl3 (>= 3.0.0). 320s systemd-resolved depends on libssl3 (>= 3.0.0). 320s systemd depends on libssl3 (>= 3.0.0). 320s sudo depends on libssl3 (>= 3.0.0). 320s s390-tools depends on libssl3 (>= 3.0.0). 320s rsync depends on libssl3 (>= 3.0.0). 320s python3-cryptography depends on libssl3 (>= 3.0.0). 320s openssh-server depends on libssl3 (>= 3.0.10). 320s openssh-client depends on libssl3 (>= 3.0.10). 320s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 320s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 320s libssh-4:s390x depends on libssl3 (>= 3.0.0). 320s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 320s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 320s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 320s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 320s libnvme1 depends on libssl3 (>= 3.0.0). 320s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 320s libkmod2:s390x depends on libssl3 (>= 3.0.0). 320s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 320s libcurl4:s390x depends on libssl3 (>= 3.0.0). 320s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 320s kmod depends on libssl3 (>= 3.0.0). 320s dhcpcd-base depends on libssl3 (>= 3.0.0). 320s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 320s 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52179 files and directories currently installed.) 320s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 320s Selecting previously unselected package libssl3t64:s390x. 320s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 320s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 320s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 321s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 321s Unpacking ubuntu-minimal (1.536) over (1.535) ... 321s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 321s Unpacking ubuntu-standard (1.536) over (1.535) ... 321s Setting up ubuntu-minimal (1.536) ... 321s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 321s Setting up ubuntu-standard (1.536) ... 321s Setting up openssl (3.0.13-0ubuntu1) ... 321s Setting up readline-common (8.2-3.1) ... 321s Setting up libreadline8t64:s390x (8.2-3.1) ... 321s Processing triggers for libc-bin (2.39-0ubuntu2) ... 321s Processing triggers for man-db (2.12.0-3) ... 321s Processing triggers for install-info (7.1-3) ... 321s Reading package lists... 321s Building dependency tree... 321s Reading state information... 322s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 322s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 322s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 322s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 322s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 323s Reading package lists... 323s Reading package lists... 323s Building dependency tree... 323s Reading state information... 324s Calculating upgrade... 324s The following packages have been kept back: 324s curl libpython3.12-minimal libpython3.12-stdlib python3.12 324s python3.12-minimal 324s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 324s Reading package lists... 324s Building dependency tree... 324s Reading state information... 324s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 327s autopkgtest [17:19:15]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 327s autopkgtest [17:19:15]: @@@@@@@@@@@@@@@@@@@@ apt-source lammps 334s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/universe lammps 20240207+dfsg-1.1build2 (dsc) [3286 B] 335s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe lammps 20240207+dfsg-1.1build2 (tar) [153 MB] 335s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe lammps 20240207+dfsg-1.1build2 (diff) [17.1 kB] 335s gpgv: Signature made Sat Mar 16 06:29:40 2024 UTC 335s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D 335s gpgv: issuer "steve.langasek@ubuntu.com" 335s gpgv: Can't check signature: No public key 335s dpkg-source: warning: cannot verify inline signature for ./lammps_20240207+dfsg-1.1build2.dsc: no acceptable signature found 351s autopkgtest [17:19:39]: testing package lammps version 20240207+dfsg-1.1build2 351s autopkgtest [17:19:39]: build not needed 376s autopkgtest [17:20:04]: test crack: preparing testbed 378s Reading package lists... 378s Building dependency tree... 378s Reading state information... 378s Starting pkgProblemResolver with broken count: 0 378s Starting 2 pkgProblemResolver with broken count: 0 378s Done 378s The following additional packages will be installed: 378s cpp-12 curl fontconfig-config fonts-dejavu-core fonts-dejavu-mono gcc-12 378s gcc-12-base gfortran-12 lammps lammps-data libaec0 libasan8 libatomic1 378s libblas3 libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev 378s libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 libdouble-conversion3 378s libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 libevent-pthreads-2.1-7 378s libfabric1 libfftw3-double3 libfontconfig1 libfreetype6 libgcc-12-dev 378s libgfortran-12-dev libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 378s libglapi-mesa libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgnutls30t64 378s libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 libhogweed6t64 libhwloc-plugins 378s libhwloc15 libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp25 378s libkim-api2 liblammps0t64 liblapack3 libllvm17 libmpc3 libmunge2 378s libnetcdf19t64 libnettle8t64 libnsl-dev libogg0 libopengl0 libopenmpi3t64 378s libpciaccess0 libpixman-1-0 libpmix2t64 libpnetcdf0d libpng16-16t64 378s libproj25 libpsl5t64 libpython3.12-minimal libpython3.12-stdlib 378s libpython3.12t64 librdmacm1 libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 378s libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtirpc-dev libtk8.6 libubsan1 378s libvoro++1 libvtk9.1t64 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 378s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 378s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 378s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev mpi-default-bin 378s ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data python3.12 378s python3.12-minimal rpcsvc-proto x11-common 378s Suggested packages: 378s gcc-12-locales cpp-12-doc gcc-12-multilib gcc-12-doc gfortran-12-multilib 378s gfortran-12-doc libcoarrays-dev openkim-models glibc-doc manpages-dev 378s libfftw3-bin libfftw3-dev glew-utils gnutls-bin proj-bin tcl8.6 tk8.6 378s vtk9-doc vtk9-examples opencl-icd gfortran | fortran-compiler 378s python3.12-venv python3.12-doc binfmt-support 378s Recommended packages: 378s lammps-doc manpages manpages-dev libc-devtools libgl1-amber-dri 378s mesa-vulkan-drivers | vulkan-icd 378s The following packages will be REMOVED: 378s libcurl3-gnutls libcurl4 libdb5.3 libgnutls30 libhogweed6 libnettle8 378s libpng16-16 libpsl5 378s The following NEW packages will be installed: 378s autopkgtest-satdep cpp-12 fontconfig-config fonts-dejavu-core 378s fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 lammps lammps-data libaec0 378s libasan8 libatomic1 libblas3 libc-dev-bin libc6-dev libcairo2 libcc1-0 378s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 378s libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 378s libevent-pthreads-2.1-7 libfabric1 libfftw3-double3 libfontconfig1 378s libfreetype6 libgcc-12-dev libgfortran-12-dev libgfortran5 libgl1 378s libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 libglvnd0 libglx-mesa0 378s libglx0 libgnutls30t64 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 378s libhogweed6t64 libhwloc-plugins libhwloc15 libisl23 libitm1 libjbig0 378s libjpeg-turbo8 libjpeg8 libjsoncpp25 libkim-api2 liblammps0t64 liblapack3 378s libllvm17 libmpc3 libmunge2 libnetcdf19t64 libnettle8t64 libnsl-dev libogg0 378s libopengl0 libopenmpi3t64 libpciaccess0 libpixman-1-0 libpmix2t64 378s libpnetcdf0d libpng16-16t64 libproj25 libpsl5t64 libpython3.12t64 librdmacm1 378s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 378s libtheora0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libvoro++1 libvtk9.1t64 378s libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 378s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 378s libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 libxrender1 libxshmfence1 378s libxss1 libxxf86vm1 linux-libc-dev mpi-default-bin ocl-icd-libopencl1 378s openmpi-bin openmpi-common proj-data rpcsvc-proto x11-common 378s The following packages will be upgraded: 378s curl libpython3.12-minimal libpython3.12-stdlib python3.12 378s python3.12-minimal 378s 5 upgraded, 117 newly installed, 8 to remove and 0 not upgraded. 378s Need to get 162 MB/162 MB of archives. 378s After this operation, 637 MB of additional disk space will be used. 378s Get:1 /tmp/autopkgtest.ikRYZd/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 378s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB] 379s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB] 379s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB] 379s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 379s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 379s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 379s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu7 [356 kB] 379s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build2 [645 kB] 379s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build2 [2437 kB] 379s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build2 [829 kB] 379s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build2 [2046 kB] 379s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-5build1 [763 kB] 379s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB] 379s Get:15 http://ftpmaster.internal/ubuntu noble/universe s390x gcc-12-base s390x 12.3.0-15ubuntu1 [45.5 kB] 379s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 379s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 379s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x cpp-12 s390x 12.3.0-15ubuntu1 [8176 kB] 379s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 379s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 379s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 379s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 379s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 379s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 379s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 379s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 379s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 380s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x libgcc-12-dev s390x 12.3.0-15ubuntu1 [857 kB] 380s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x gcc-12 s390x 12.3.0-15ubuntu1 [16.2 MB] 380s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 380s Get:31 http://ftpmaster.internal/ubuntu noble/universe s390x libgfortran-12-dev s390x 12.3.0-15ubuntu1 [517 kB] 380s Get:32 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 380s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 380s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 380s Get:35 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 380s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 380s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 380s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 380s Get:39 http://ftpmaster.internal/ubuntu noble/universe s390x gfortran-12 s390x 12.3.0-15ubuntu1 [8590 kB] 380s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x lammps-data all 20240207+dfsg-1.1build2 [9706 kB] 381s Get:41 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] 381s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 381s Get:43 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 381s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 381s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 381s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 381s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 381s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 381s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 381s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 381s Get:51 http://ftpmaster.internal/ubuntu noble/universe s390x libdouble-conversion3 s390x 3.3.0-1 [39.6 kB] 381s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-amdgpu1 s390x 2.4.120-2 [21.1 kB] 381s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-nouveau2 s390x 2.4.120-2 [18.5 kB] 381s Get:54 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-radeon1 s390x 2.4.120-2 [22.7 kB] 381s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libevent-pthreads-2.1-7 s390x 2.1.12-stable-9 [7692 B] 381s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x librdmacm1 s390x 50.0-1 [73.9 kB] 381s Get:57 http://ftpmaster.internal/ubuntu noble/universe s390x libfabric1 s390x 1.17.0-3 [513 kB] 381s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libfftw3-double3 s390x 3.3.10-1ubuntu1 [465 kB] 381s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libvulkan1 s390x 1.3.275.0-1 [155 kB] 381s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libglapi-mesa s390x 24.0.1-1ubuntu1 [68.7 kB] 381s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libllvm17 s390x 1:17.0.6-5build1 [31.2 MB] 382s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri3-0 s390x 1.15-1 [7270 B] 382s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x libgl1-mesa-dri s390x 24.0.1-1ubuntu1 [7184 kB] 383s Get:64 http://ftpmaster.internal/ubuntu noble/main s390x libglvnd0 s390x 1.7.0-1 [106 kB] 383s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libx11-xcb1 s390x 2:1.8.7-1 [7778 B] 383s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri2-0 s390x 1.15-1 [7426 B] 383s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-glx0 s390x 1.15-1 [25.8 kB] 383s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-present0 s390x 1.15-1 [5752 B] 383s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-randr0 s390x 1.15-1 [19.0 kB] 383s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-sync1 s390x 1.15-1 [9392 B] 383s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xfixes0 s390x 1.15-1 [10.5 kB] 383s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libxfixes3 s390x 1:6.0.0-2 [10.6 kB] 383s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libxshmfence1 s390x 1.3-1build4 [5334 B] 383s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libxxf86vm1 s390x 1:1.1.4-1build3 [9900 B] 383s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libglx-mesa0 s390x 24.0.1-1ubuntu1 [182 kB] 383s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libglx0 s390x 1.7.0-1 [31.4 kB] 383s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libgl1 s390x 1.7.0-1 [137 kB] 383s Get:78 http://ftpmaster.internal/ubuntu noble/universe s390x libgl2ps1.4 s390x 1.4.2+dfsg1-2 [40.2 kB] 383s Get:79 http://ftpmaster.internal/ubuntu noble/universe s390x libglew2.2 s390x 2.2.0-4 [202 kB] 383s Get:80 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] 383s Get:81 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-3.1ubuntu3 [1436 kB] 383s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-hl-100t64 s390x 1.10.10+repack-3.1ubuntu3 [58.2 kB] 383s Get:83 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc15 s390x 2.10.0-1 [174 kB] 383s Get:84 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 383s Get:85 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 383s Get:86 http://ftpmaster.internal/ubuntu noble/main s390x libjsoncpp25 s390x 1.9.5-6 [75.5 kB] 383s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libkim-api2 s390x 2.3.0-1 [544 kB] 383s Get:88 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 383s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libnetcdf19t64 s390x 1:4.9.2-5ubuntu3 [506 kB] 383s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libmunge2 s390x 0.5.15-3ubuntu1 [17.3 kB] 383s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libpciaccess0 s390x 0.17-3 [18.5 kB] 383s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu1 [11.7 kB] 383s Get:93 http://ftpmaster.internal/ubuntu noble/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1 [39.1 kB] 383s Get:94 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc-plugins s390x 2.10.0-1 [16.1 kB] 383s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libpmix2t64 s390x 5.0.1-4.1 [727 kB] 383s Get:96 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libopenmpi3t64 s390x 4.1.6-6ubuntu1 [2437 kB] 383s Get:97 http://ftpmaster.internal/ubuntu noble/universe s390x libpnetcdf0d s390x 1.12.3-2 [820 kB] 383s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12t64 s390x 3.12.2-4build2 [2529 kB] 383s Get:99 http://ftpmaster.internal/ubuntu noble/universe s390x libvoro++1 s390x 0.5+revert-to-0.4.6+dfsg1-1 [110 kB] 383s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libogg0 s390x 1.3.5-3 [22.7 kB] 383s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libopengl0 s390x 1.7.0-1 [45.9 kB] 383s Get:102 http://ftpmaster.internal/ubuntu noble/universe s390x proj-data all 9.3.1-1 [7867 kB] 383s Get:103 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 383s Get:104 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 383s Get:105 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 383s Get:106 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 383s Get:107 http://ftpmaster.internal/ubuntu noble/universe s390x libproj25 s390x 9.3.1-1 [1368 kB] 383s Get:108 http://ftpmaster.internal/ubuntu noble/universe s390x libtbbmalloc2 s390x 2021.11.0-2ubuntu2 [68.0 kB] 383s Get:109 http://ftpmaster.internal/ubuntu noble/universe s390x libtbbbind-2-5 s390x 2021.11.0-2ubuntu2 [16.7 kB] 383s Get:110 http://ftpmaster.internal/ubuntu noble/universe s390x libtbb12 s390x 2021.11.0-2ubuntu2 [118 kB] 383s Get:111 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 383s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libtheora0 s390x 1.1.1+dfsg.1-16.1 [262 kB] 383s Get:113 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 383s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 383s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 383s Get:116 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 383s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libvtk9.1t64 s390x 9.1.0+really9.1.0+dfsg2-7.1build2 [22.1 MB] 384s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x liblammps0t64 s390x 20240207+dfsg-1.1build2 [7961 kB] 384s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-common all 4.1.6-6ubuntu1 [170 kB] 384s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-bin s390x 4.1.6-6ubuntu1 [84.5 kB] 385s Get:121 http://ftpmaster.internal/ubuntu noble/universe s390x mpi-default-bin s390x 1.15 [2338 B] 385s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x lammps s390x 20240207+dfsg-1.1build2 [15.2 kB] 385s Fetched 162 MB in 6s (25.9 MB/s) 385s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested: 385s librtmp1:s390x depends on libhogweed6. 385s libjcat1:s390x depends on libhogweed6. 385s libgnutls30:s390x depends on libhogweed6 (>= 3.6). 385s 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52181 files and directories currently installed.) 385s Removing libhogweed6:s390x (3.9.1-2) ... 385s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested: 385s librtmp1:s390x depends on libnettle8. 385s libgnutls30:s390x depends on libnettle8 (>= 3.9~). 385s libcurl3-gnutls:s390x depends on libnettle8. 385s libarchive13:s390x depends on libnettle8. 385s 385s Removing libnettle8:s390x (3.9.1-2) ... 385s Selecting previously unselected package libnettle8t64:s390x. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 385s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ... 385s Unpacking libnettle8t64:s390x (3.9.1-2.2) ... 385s Selecting previously unselected package libhogweed6t64:s390x. 385s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ... 385s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ... 385s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested: 385s librtmp1:s390x depends on libgnutls30 (>= 3.7.2). 385s libldap2:s390x depends on libgnutls30 (>= 3.8.2). 385s libjcat1:s390x depends on libgnutls30 (>= 3.7.3). 385s libcurl3-gnutls:s390x depends on libgnutls30 (>= 3.8.2). 385s fwupd depends on libgnutls30 (>= 3.7.3). 385s dirmngr depends on libgnutls30 (>= 3.8.1). 385s apt depends on libgnutls30 (>= 3.8.1). 385s 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52183 files and directories currently installed.) 385s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ... 385s Selecting previously unselected package libgnutls30t64:s390x. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 385s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ... 385s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 385s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 385s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 385s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 385s s390-tools depends on libcurl4 (>= 7.16.2). 385s 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 385s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 385s Selecting previously unselected package libcurl4t64:s390x. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52197 files and directories currently installed.) 385s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 385s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 385s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 385s wget depends on libpsl5 (>= 0.16.0). 385s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 385s 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52203 files and directories currently installed.) 385s Removing libpsl5:s390x (0.21.2-1build1) ... 385s Selecting previously unselected package libpsl5t64:s390x. 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52198 files and directories currently installed.) 385s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 385s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 385s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested: 385s libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0). 385s fwupd depends on libcurl3-gnutls (>= 7.63.0). 385s 385s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 385s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... 386s Selecting previously unselected package libcurl3t64-gnutls:s390x. 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52197 files and directories currently installed.) 386s Preparing to unpack .../libcurl3t64-gnutls_8.5.0-2ubuntu7_s390x.deb ... 386s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu7) ... 386s Preparing to unpack .../python3.12_3.12.2-4build2_s390x.deb ... 386s Unpacking python3.12 (3.12.2-4build2) over (3.12.2-1) ... 386s Preparing to unpack .../python3.12-minimal_3.12.2-4build2_s390x.deb ... 386s Unpacking python3.12-minimal (3.12.2-4build2) over (3.12.2-1) ... 386s Preparing to unpack .../libpython3.12-minimal_3.12.2-4build2_s390x.deb ... 386s Unpacking libpython3.12-minimal:s390x (3.12.2-4build2) over (3.12.2-1) ... 386s Preparing to unpack .../libpython3.12-stdlib_3.12.2-4build2_s390x.deb ... 386s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build2) over (3.12.2-1) ... 386s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested: 386s libsasl2-modules-db:s390x depends on libdb5.3. 386s libpython3.11-stdlib:s390x depends on libdb5.3. 386s libperl5.38:s390x depends on libdb5.3. 386s libpam-modules:s390x depends on libdb5.3. 386s iproute2 depends on libdb5.3. 386s apt-utils depends on libdb5.3. 386s 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 386s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ... 386s Selecting previously unselected package libdb5.3t64:s390x. 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52196 files and directories currently installed.) 386s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5build1_s390x.deb ... 386s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-5build1) ... 386s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-5build1) ... 386s dpkg: libpng16-16:s390x: dependency problems, but removing anyway as you requested: 386s libplymouth5:s390x depends on libpng16-16 (>= 1.6.2). 386s 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 386s Removing libpng16-16:s390x (1.6.43-1) ... 386s Selecting previously unselected package libpng16-16t64:s390x. 386s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52192 files and directories currently installed.) 386s Preparing to unpack .../000-libpng16-16t64_1.6.43-3_s390x.deb ... 386s Unpacking libpng16-16t64:s390x (1.6.43-3) ... 386s Selecting previously unselected package gcc-12-base:s390x. 386s Preparing to unpack .../001-gcc-12-base_12.3.0-15ubuntu1_s390x.deb ... 386s Unpacking gcc-12-base:s390x (12.3.0-15ubuntu1) ... 386s Selecting previously unselected package libisl23:s390x. 386s Preparing to unpack .../002-libisl23_0.26-3_s390x.deb ... 386s Unpacking libisl23:s390x (0.26-3) ... 386s Selecting previously unselected package libmpc3:s390x. 386s Preparing to unpack .../003-libmpc3_1.3.1-1_s390x.deb ... 386s Unpacking libmpc3:s390x (1.3.1-1) ... 386s Selecting previously unselected package cpp-12. 386s Preparing to unpack .../004-cpp-12_12.3.0-15ubuntu1_s390x.deb ... 386s Unpacking cpp-12 (12.3.0-15ubuntu1) ... 386s Selecting previously unselected package fonts-dejavu-mono. 386s Preparing to unpack .../005-fonts-dejavu-mono_2.37-8_all.deb ... 386s Unpacking fonts-dejavu-mono (2.37-8) ... 386s Selecting previously unselected package fonts-dejavu-core. 386s Preparing to unpack .../006-fonts-dejavu-core_2.37-8_all.deb ... 386s Unpacking fonts-dejavu-core (2.37-8) ... 386s Selecting previously unselected package fontconfig-config. 386s Preparing to unpack .../007-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 387s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 387s Selecting previously unselected package libcc1-0:s390x. 387s Preparing to unpack .../008-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libgomp1:s390x. 387s Preparing to unpack .../009-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libitm1:s390x. 387s Preparing to unpack .../010-libitm1_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libatomic1:s390x. 387s Preparing to unpack .../011-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libasan8:s390x. 387s Preparing to unpack .../012-libasan8_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libubsan1:s390x. 387s Preparing to unpack .../013-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libgcc-12-dev:s390x. 387s Preparing to unpack .../014-libgcc-12-dev_12.3.0-15ubuntu1_s390x.deb ... 387s Unpacking libgcc-12-dev:s390x (12.3.0-15ubuntu1) ... 387s Selecting previously unselected package gcc-12. 387s Preparing to unpack .../015-gcc-12_12.3.0-15ubuntu1_s390x.deb ... 387s Unpacking gcc-12 (12.3.0-15ubuntu1) ... 387s Selecting previously unselected package libgfortran5:s390x. 387s Preparing to unpack .../016-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 387s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 387s Selecting previously unselected package libgfortran-12-dev:s390x. 387s Preparing to unpack .../017-libgfortran-12-dev_12.3.0-15ubuntu1_s390x.deb ... 387s Unpacking libgfortran-12-dev:s390x (12.3.0-15ubuntu1) ... 387s Selecting previously unselected package libc-dev-bin. 387s Preparing to unpack .../018-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 387s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 387s Selecting previously unselected package linux-libc-dev:s390x. 387s Preparing to unpack .../019-linux-libc-dev_6.8.0-11.11_s390x.deb ... 387s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 387s Selecting previously unselected package libcrypt-dev:s390x. 387s Preparing to unpack .../020-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 387s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 387s Selecting previously unselected package libtirpc-dev:s390x. 387s Preparing to unpack .../021-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 387s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 387s Selecting previously unselected package libnsl-dev:s390x. 387s Preparing to unpack .../022-libnsl-dev_1.3.0-3_s390x.deb ... 387s Unpacking libnsl-dev:s390x (1.3.0-3) ... 387s Selecting previously unselected package rpcsvc-proto. 387s Preparing to unpack .../023-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 387s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 387s Selecting previously unselected package libc6-dev:s390x. 387s Preparing to unpack .../024-libc6-dev_2.39-0ubuntu2_s390x.deb ... 387s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 388s Selecting previously unselected package gfortran-12. 388s Preparing to unpack .../025-gfortran-12_12.3.0-15ubuntu1_s390x.deb ... 388s Unpacking gfortran-12 (12.3.0-15ubuntu1) ... 388s Selecting previously unselected package lammps-data. 388s Preparing to unpack .../026-lammps-data_20240207+dfsg-1.1build2_all.deb ... 388s Unpacking lammps-data (20240207+dfsg-1.1build2) ... 388s Selecting previously unselected package libaec0:s390x. 388s Preparing to unpack .../027-libaec0_1.1.2-1_s390x.deb ... 388s Unpacking libaec0:s390x (1.1.2-1) ... 388s Selecting previously unselected package libblas3:s390x. 388s Preparing to unpack .../028-libblas3_3.12.0-3_s390x.deb ... 388s Unpacking libblas3:s390x (3.12.0-3) ... 388s Selecting previously unselected package libfreetype6:s390x. 388s Preparing to unpack .../029-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 388s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 388s Selecting previously unselected package libfontconfig1:s390x. 388s Preparing to unpack .../030-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 388s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 388s Selecting previously unselected package libpixman-1-0:s390x. 388s Preparing to unpack .../031-libpixman-1-0_0.42.2-1_s390x.deb ... 388s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 388s Selecting previously unselected package libxcb-render0:s390x. 388s Preparing to unpack .../032-libxcb-render0_1.15-1_s390x.deb ... 388s Unpacking libxcb-render0:s390x (1.15-1) ... 388s Selecting previously unselected package libxcb-shm0:s390x. 388s Preparing to unpack .../033-libxcb-shm0_1.15-1_s390x.deb ... 388s Unpacking libxcb-shm0:s390x (1.15-1) ... 388s Selecting previously unselected package libxrender1:s390x. 388s Preparing to unpack .../034-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 388s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 388s Selecting previously unselected package libcairo2:s390x. 388s Preparing to unpack .../035-libcairo2_1.18.0-1_s390x.deb ... 388s Unpacking libcairo2:s390x (1.18.0-1) ... 388s Selecting previously unselected package libdeflate0:s390x. 388s Preparing to unpack .../036-libdeflate0_1.19-1_s390x.deb ... 388s Unpacking libdeflate0:s390x (1.19-1) ... 388s Selecting previously unselected package libdouble-conversion3:s390x. 388s Preparing to unpack .../037-libdouble-conversion3_3.3.0-1_s390x.deb ... 388s Unpacking libdouble-conversion3:s390x (3.3.0-1) ... 388s Selecting previously unselected package libdrm-amdgpu1:s390x. 388s Preparing to unpack .../038-libdrm-amdgpu1_2.4.120-2_s390x.deb ... 388s Unpacking libdrm-amdgpu1:s390x (2.4.120-2) ... 388s Selecting previously unselected package libdrm-nouveau2:s390x. 388s Preparing to unpack .../039-libdrm-nouveau2_2.4.120-2_s390x.deb ... 388s Unpacking libdrm-nouveau2:s390x (2.4.120-2) ... 388s Selecting previously unselected package libdrm-radeon1:s390x. 388s Preparing to unpack .../040-libdrm-radeon1_2.4.120-2_s390x.deb ... 388s Unpacking libdrm-radeon1:s390x (2.4.120-2) ... 388s Selecting previously unselected package libevent-pthreads-2.1-7:s390x. 388s Preparing to unpack .../041-libevent-pthreads-2.1-7_2.1.12-stable-9_s390x.deb ... 388s Unpacking libevent-pthreads-2.1-7:s390x (2.1.12-stable-9) ... 388s Selecting previously unselected package librdmacm1:s390x. 388s Preparing to unpack .../042-librdmacm1_50.0-1_s390x.deb ... 388s Unpacking librdmacm1:s390x (50.0-1) ... 388s Selecting previously unselected package libfabric1:s390x. 388s Preparing to unpack .../043-libfabric1_1.17.0-3_s390x.deb ... 388s Unpacking libfabric1:s390x (1.17.0-3) ... 388s Selecting previously unselected package libfftw3-double3:s390x. 388s Preparing to unpack .../044-libfftw3-double3_3.3.10-1ubuntu1_s390x.deb ... 388s Unpacking libfftw3-double3:s390x (3.3.10-1ubuntu1) ... 388s Selecting previously unselected package libvulkan1:s390x. 388s Preparing to unpack .../045-libvulkan1_1.3.275.0-1_s390x.deb ... 388s Unpacking libvulkan1:s390x (1.3.275.0-1) ... 388s Selecting previously unselected package libglapi-mesa:s390x. 388s Preparing to unpack .../046-libglapi-mesa_24.0.1-1ubuntu1_s390x.deb ... 388s Unpacking libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 388s Selecting previously unselected package libllvm17:s390x. 388s Preparing to unpack .../047-libllvm17_1%3a17.0.6-5build1_s390x.deb ... 388s Unpacking libllvm17:s390x (1:17.0.6-5build1) ... 389s Selecting previously unselected package libxcb-dri3-0:s390x. 389s Preparing to unpack .../048-libxcb-dri3-0_1.15-1_s390x.deb ... 389s Unpacking libxcb-dri3-0:s390x (1.15-1) ... 389s Selecting previously unselected package libgl1-mesa-dri:s390x. 389s Preparing to unpack .../049-libgl1-mesa-dri_24.0.1-1ubuntu1_s390x.deb ... 389s Unpacking libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 390s Selecting previously unselected package libglvnd0:s390x. 390s Preparing to unpack .../050-libglvnd0_1.7.0-1_s390x.deb ... 390s Unpacking libglvnd0:s390x (1.7.0-1) ... 390s Selecting previously unselected package libx11-xcb1:s390x. 390s Preparing to unpack .../051-libx11-xcb1_2%3a1.8.7-1_s390x.deb ... 390s Unpacking libx11-xcb1:s390x (2:1.8.7-1) ... 390s Selecting previously unselected package libxcb-dri2-0:s390x. 390s Preparing to unpack .../052-libxcb-dri2-0_1.15-1_s390x.deb ... 390s Unpacking libxcb-dri2-0:s390x (1.15-1) ... 390s Selecting previously unselected package libxcb-glx0:s390x. 390s Preparing to unpack .../053-libxcb-glx0_1.15-1_s390x.deb ... 390s Unpacking libxcb-glx0:s390x (1.15-1) ... 390s Selecting previously unselected package libxcb-present0:s390x. 390s Preparing to unpack .../054-libxcb-present0_1.15-1_s390x.deb ... 390s Unpacking libxcb-present0:s390x (1.15-1) ... 390s Selecting previously unselected package libxcb-randr0:s390x. 390s Preparing to unpack .../055-libxcb-randr0_1.15-1_s390x.deb ... 390s Unpacking libxcb-randr0:s390x (1.15-1) ... 390s Selecting previously unselected package libxcb-sync1:s390x. 390s Preparing to unpack .../056-libxcb-sync1_1.15-1_s390x.deb ... 390s Unpacking libxcb-sync1:s390x (1.15-1) ... 390s Selecting previously unselected package libxcb-xfixes0:s390x. 390s Preparing to unpack .../057-libxcb-xfixes0_1.15-1_s390x.deb ... 390s Unpacking libxcb-xfixes0:s390x (1.15-1) ... 390s Selecting previously unselected package libxfixes3:s390x. 390s Preparing to unpack .../058-libxfixes3_1%3a6.0.0-2_s390x.deb ... 390s Unpacking libxfixes3:s390x (1:6.0.0-2) ... 390s Selecting previously unselected package libxshmfence1:s390x. 390s Preparing to unpack .../059-libxshmfence1_1.3-1build4_s390x.deb ... 390s Unpacking libxshmfence1:s390x (1.3-1build4) ... 390s Selecting previously unselected package libxxf86vm1:s390x. 390s Preparing to unpack .../060-libxxf86vm1_1%3a1.1.4-1build3_s390x.deb ... 390s Unpacking libxxf86vm1:s390x (1:1.1.4-1build3) ... 390s Selecting previously unselected package libglx-mesa0:s390x. 390s Preparing to unpack .../061-libglx-mesa0_24.0.1-1ubuntu1_s390x.deb ... 390s Unpacking libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 390s Selecting previously unselected package libglx0:s390x. 390s Preparing to unpack .../062-libglx0_1.7.0-1_s390x.deb ... 390s Unpacking libglx0:s390x (1.7.0-1) ... 390s Selecting previously unselected package libgl1:s390x. 390s Preparing to unpack .../063-libgl1_1.7.0-1_s390x.deb ... 390s Unpacking libgl1:s390x (1.7.0-1) ... 390s Selecting previously unselected package libgl2ps1.4. 390s Preparing to unpack .../064-libgl2ps1.4_1.4.2+dfsg1-2_s390x.deb ... 390s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2) ... 390s Selecting previously unselected package libglew2.2:s390x. 390s Preparing to unpack .../065-libglew2.2_2.2.0-4_s390x.deb ... 390s Unpacking libglew2.2:s390x (2.2.0-4) ... 390s Selecting previously unselected package libsz2:s390x. 390s Preparing to unpack .../066-libsz2_1.1.2-1_s390x.deb ... 390s Unpacking libsz2:s390x (1.1.2-1) ... 390s Selecting previously unselected package libhdf5-103-1t64:s390x. 390s Preparing to unpack .../067-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu3_s390x.deb ... 390s Unpacking libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu3) ... 390s Selecting previously unselected package libhdf5-hl-100t64:s390x. 390s Preparing to unpack .../068-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu3_s390x.deb ... 390s Unpacking libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu3) ... 390s Selecting previously unselected package libhwloc15:s390x. 390s Preparing to unpack .../069-libhwloc15_2.10.0-1_s390x.deb ... 390s Unpacking libhwloc15:s390x (2.10.0-1) ... 390s Selecting previously unselected package libjpeg-turbo8:s390x. 390s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 390s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 390s Selecting previously unselected package libjpeg8:s390x. 390s Preparing to unpack .../071-libjpeg8_8c-2ubuntu11_s390x.deb ... 390s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 390s Selecting previously unselected package libjsoncpp25:s390x. 390s Preparing to unpack .../072-libjsoncpp25_1.9.5-6_s390x.deb ... 390s Unpacking libjsoncpp25:s390x (1.9.5-6) ... 390s Selecting previously unselected package libkim-api2:s390x. 390s Preparing to unpack .../073-libkim-api2_2.3.0-1_s390x.deb ... 390s Unpacking libkim-api2:s390x (2.3.0-1) ... 390s Selecting previously unselected package liblapack3:s390x. 390s Preparing to unpack .../074-liblapack3_3.12.0-3_s390x.deb ... 390s Unpacking liblapack3:s390x (3.12.0-3) ... 390s Selecting previously unselected package libnetcdf19t64:s390x. 390s Preparing to unpack .../075-libnetcdf19t64_1%3a4.9.2-5ubuntu3_s390x.deb ... 390s Unpacking libnetcdf19t64:s390x (1:4.9.2-5ubuntu3) ... 390s Selecting previously unselected package libmunge2:s390x. 390s Preparing to unpack .../076-libmunge2_0.5.15-3ubuntu1_s390x.deb ... 390s Unpacking libmunge2:s390x (0.5.15-3ubuntu1) ... 390s Selecting previously unselected package libpciaccess0:s390x. 390s Preparing to unpack .../077-libpciaccess0_0.17-3_s390x.deb ... 390s Unpacking libpciaccess0:s390x (0.17-3) ... 390s Selecting previously unselected package libxnvctrl0:s390x. 390s Preparing to unpack .../078-libxnvctrl0_510.47.03-0ubuntu1_s390x.deb ... 390s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu1) ... 390s Selecting previously unselected package ocl-icd-libopencl1:s390x. 390s Preparing to unpack .../079-ocl-icd-libopencl1_2.3.2-1_s390x.deb ... 390s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1) ... 390s Selecting previously unselected package libhwloc-plugins:s390x. 390s Preparing to unpack .../080-libhwloc-plugins_2.10.0-1_s390x.deb ... 390s Unpacking libhwloc-plugins:s390x (2.10.0-1) ... 390s Selecting previously unselected package libpmix2t64:s390x. 390s Preparing to unpack .../081-libpmix2t64_5.0.1-4.1_s390x.deb ... 390s Unpacking libpmix2t64:s390x (5.0.1-4.1) ... 390s Selecting previously unselected package libopenmpi3t64:s390x. 390s Preparing to unpack .../082-libopenmpi3t64_4.1.6-6ubuntu1_s390x.deb ... 390s Unpacking libopenmpi3t64:s390x (4.1.6-6ubuntu1) ... 390s Selecting previously unselected package libpnetcdf0d:s390x. 390s Preparing to unpack .../083-libpnetcdf0d_1.12.3-2_s390x.deb ... 390s Unpacking libpnetcdf0d:s390x (1.12.3-2) ... 390s Selecting previously unselected package libpython3.12t64:s390x. 390s Preparing to unpack .../084-libpython3.12t64_3.12.2-4build2_s390x.deb ... 390s Unpacking libpython3.12t64:s390x (3.12.2-4build2) ... 390s Selecting previously unselected package libvoro++1. 390s Preparing to unpack .../085-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_s390x.deb ... 390s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 390s Selecting previously unselected package libogg0:s390x. 390s Preparing to unpack .../086-libogg0_1.3.5-3_s390x.deb ... 390s Unpacking libogg0:s390x (1.3.5-3) ... 390s Selecting previously unselected package libopengl0:s390x. 390s Preparing to unpack .../087-libopengl0_1.7.0-1_s390x.deb ... 390s Unpacking libopengl0:s390x (1.7.0-1) ... 390s Selecting previously unselected package proj-data. 390s Preparing to unpack .../088-proj-data_9.3.1-1_all.deb ... 390s Unpacking proj-data (9.3.1-1) ... 391s Selecting previously unselected package libjbig0:s390x. 391s Preparing to unpack .../089-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 391s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 391s Selecting previously unselected package libsharpyuv0:s390x. 391s Preparing to unpack .../090-libsharpyuv0_1.3.2-0.4_s390x.deb ... 391s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 391s Selecting previously unselected package libwebp7:s390x. 391s Preparing to unpack .../091-libwebp7_1.3.2-0.4_s390x.deb ... 391s Unpacking libwebp7:s390x (1.3.2-0.4) ... 391s Selecting previously unselected package libtiff6:s390x. 391s Preparing to unpack .../092-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 391s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 391s Selecting previously unselected package libproj25:s390x. 391s Preparing to unpack .../093-libproj25_9.3.1-1_s390x.deb ... 391s Unpacking libproj25:s390x (9.3.1-1) ... 391s Selecting previously unselected package libtbbmalloc2:s390x. 391s Preparing to unpack .../094-libtbbmalloc2_2021.11.0-2ubuntu2_s390x.deb ... 391s Unpacking libtbbmalloc2:s390x (2021.11.0-2ubuntu2) ... 391s Selecting previously unselected package libtbbbind-2-5:s390x. 391s Preparing to unpack .../095-libtbbbind-2-5_2021.11.0-2ubuntu2_s390x.deb ... 391s Unpacking libtbbbind-2-5:s390x (2021.11.0-2ubuntu2) ... 391s Selecting previously unselected package libtbb12:s390x. 391s Preparing to unpack .../096-libtbb12_2021.11.0-2ubuntu2_s390x.deb ... 391s Unpacking libtbb12:s390x (2021.11.0-2ubuntu2) ... 391s Selecting previously unselected package libtcl8.6:s390x. 391s Preparing to unpack .../097-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 391s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 391s Selecting previously unselected package libtheora0:s390x. 391s Preparing to unpack .../098-libtheora0_1.1.1+dfsg.1-16.1_s390x.deb ... 391s Unpacking libtheora0:s390x (1.1.1+dfsg.1-16.1) ... 391s Selecting previously unselected package libxft2:s390x. 391s Preparing to unpack .../099-libxft2_2.3.6-1_s390x.deb ... 391s Unpacking libxft2:s390x (2.3.6-1) ... 391s Selecting previously unselected package x11-common. 391s Preparing to unpack .../100-x11-common_1%3a7.7+23ubuntu2_all.deb ... 391s Unpacking x11-common (1:7.7+23ubuntu2) ... 391s Selecting previously unselected package libxss1:s390x. 391s Preparing to unpack .../101-libxss1_1%3a1.2.3-1build2_s390x.deb ... 391s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 391s Selecting previously unselected package libtk8.6:s390x. 391s Preparing to unpack .../102-libtk8.6_8.6.13-2_s390x.deb ... 391s Unpacking libtk8.6:s390x (8.6.13-2) ... 391s Selecting previously unselected package libvtk9.1t64:s390x. 391s Preparing to unpack .../103-libvtk9.1t64_9.1.0+really9.1.0+dfsg2-7.1build2_s390x.deb ... 391s Unpacking libvtk9.1t64:s390x (9.1.0+really9.1.0+dfsg2-7.1build2) ... 392s Selecting previously unselected package liblammps0t64:s390x. 392s Preparing to unpack .../104-liblammps0t64_20240207+dfsg-1.1build2_s390x.deb ... 392s Unpacking liblammps0t64:s390x (20240207+dfsg-1.1build2) ... 392s Selecting previously unselected package openmpi-common. 392s Preparing to unpack .../105-openmpi-common_4.1.6-6ubuntu1_all.deb ... 392s Unpacking openmpi-common (4.1.6-6ubuntu1) ... 392s Selecting previously unselected package openmpi-bin. 392s Preparing to unpack .../106-openmpi-bin_4.1.6-6ubuntu1_s390x.deb ... 392s Unpacking openmpi-bin (4.1.6-6ubuntu1) ... 392s Selecting previously unselected package mpi-default-bin. 392s Preparing to unpack .../107-mpi-default-bin_1.15_s390x.deb ... 392s Unpacking mpi-default-bin (1.15) ... 392s Selecting previously unselected package lammps. 392s Preparing to unpack .../108-lammps_20240207+dfsg-1.1build2_s390x.deb ... 392s Unpacking lammps (20240207+dfsg-1.1build2) ... 392s Selecting previously unselected package autopkgtest-satdep. 392s Preparing to unpack .../109-1-autopkgtest-satdep.deb ... 392s Unpacking autopkgtest-satdep (0) ... 392s Setting up libxcb-dri3-0:s390x (1.15-1) ... 392s Setting up libtbbmalloc2:s390x (2021.11.0-2ubuntu2) ... 392s Setting up libpixman-1-0:s390x (0.42.2-1) ... 392s Setting up librdmacm1:s390x (50.0-1) ... 392s Setting up libsharpyuv0:s390x (1.3.2-0.4) ... 392s Setting up libx11-xcb1:s390x (2:1.8.7-1) ... 392s Setting up libpciaccess0:s390x (0.17-3) ... 392s Setting up libdouble-conversion3:s390x (3.3.0-1) ... 392s Setting up libdrm-nouveau2:s390x (2.4.120-2) ... 392s Setting up libxcb-xfixes0:s390x (1.15-1) ... 392s Setting up libogg0:s390x (1.3.5-3) ... 392s Setting up proj-data (9.3.1-1) ... 392s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 392s Setting up lammps-data (20240207+dfsg-1.1build2) ... 392s Setting up libxcb-render0:s390x (1.15-1) ... 392s Setting up libdrm-radeon1:s390x (2.4.120-2) ... 392s Setting up libglvnd0:s390x (1.7.0-1) ... 392s Setting up libxcb-glx0:s390x (1.15-1) ... 392s Setting up libpython3.12-minimal:s390x (3.12.2-4build2) ... 392s Setting up x11-common (1:7.7+23ubuntu2) ... 392s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 392s Setting up libdeflate0:s390x (1.19-1) ... 392s Setting up linux-libc-dev:s390x (6.8.0-11.11) ... 392s Setting up libxcb-shm0:s390x (1.15-1) ... 392s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ... 392s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 392s Setting up libaec0:s390x (1.1.2-1) ... 392s Setting up libopengl0:s390x (1.7.0-1) ... 392s Setting up libxxf86vm1:s390x (1:1.1.4-1build3) ... 392s Setting up gcc-12-base:s390x (12.3.0-15ubuntu1) ... 392s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu1) ... 392s Setting up libxcb-present0:s390x (1.15-1) ... 392s Setting up libnettle8t64:s390x (3.9.1-2.2) ... 392s Setting up libblas3:s390x (3.12.0-3) ... 392s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 392s Setting up libtirpc-dev:s390x (1.3.4+ds-1build1) ... 392s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 392s Setting up libmunge2:s390x (0.5.15-3ubuntu1) ... 392s Setting up libxfixes3:s390x (1:6.0.0-2) ... 392s Setting up libxcb-sync1:s390x (1.15-1) ... 392s Setting up fonts-dejavu-mono (2.37-8) ... 392s Setting up libpng16-16t64:s390x (1.6.43-3) ... 392s Setting up libhwloc15:s390x (2.10.0-1) ... 392s Setting up libmpc3:s390x (1.3.1-1) ... 392s Setting up libatomic1:s390x (14-20240303-1ubuntu1) ... 392s Setting up libtcl8.6:s390x (8.6.13+dfsg-2) ... 392s Setting up libjsoncpp25:s390x (1.9.5-6) ... 392s Setting up fonts-dejavu-core (2.37-8) ... 392s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 392s Setting up libfftw3-double3:s390x (3.3.10-1ubuntu1) ... 392s Setting up libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 392s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 392s Setting up libvulkan1:s390x (1.3.275.0-1) ... 392s Setting up libwebp7:s390x (1.3.2-0.4) ... 392s Setting up libubsan1:s390x (14-20240303-1ubuntu1) ... 392s Setting up libxcb-dri2-0:s390x (1.15-1) ... 392s Setting up libhogweed6t64:s390x (3.9.1-2.2) ... 392s Setting up libnsl-dev:s390x (1.3.0-3) ... 392s Setting up ocl-icd-libopencl1:s390x (2.3.2-1) ... 392s Setting up libxshmfence1:s390x (1.3-1build4) ... 392s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 392s Setting up libxcb-randr0:s390x (1.15-1) ... 392s Setting up libasan8:s390x (14-20240303-1ubuntu1) ... 392s Setting up openmpi-common (4.1.6-6ubuntu1) ... 392s Setting up libxss1:s390x (1:1.2.3-1build2) ... 392s Setting up libisl23:s390x (0.26-3) ... 392s Setting up libc-dev-bin (2.39-0ubuntu2) ... 392s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 392s Setting up libllvm17:s390x (1:17.0.6-5build1) ... 392s Setting up libcc1-0:s390x (14-20240303-1ubuntu1) ... 392s Setting up libsz2:s390x (1.1.2-1) ... 392s Setting up libitm1:s390x (14-20240303-1ubuntu1) ... 392s Setting up libevent-pthreads-2.1-7:s390x (2.1.12-stable-9) ... 392s Setting up libdrm-amdgpu1:s390x (2.4.120-2) ... 392s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 392s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 392s Setting up libfabric1:s390x (1.17.0-3) ... 392s Setting up python3.12-minimal (3.12.2-4build2) ... 393s Setting up liblapack3:s390x (3.12.0-3) ... 393s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 393s Setting up cpp-12 (12.3.0-15ubuntu1) ... 394s Setting up libpython3.12-stdlib:s390x (3.12.2-4build2) ... 394s Setting up libcurl4t64:s390x (8.5.0-2ubuntu7) ... 394s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 394s Setting up python3.12 (3.12.2-4build2) ... 395s Setting up libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 395s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu7) ... 395s Setting up libhwloc-plugins:s390x (2.10.0-1) ... 395s Setting up libtbbbind-2-5:s390x (2021.11.0-2ubuntu2) ... 395s Setting up libpython3.12t64:s390x (3.12.2-4build2) ... 395s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ... 395s Setting up libgcc-12-dev:s390x (12.3.0-15ubuntu1) ... 395s Setting up libpmix2t64:s390x (5.0.1-4.1) ... 395s Setting up libopenmpi3t64:s390x (4.1.6-6ubuntu1) ... 395s Setting up libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 395s Setting up libpnetcdf0d:s390x (1.12.3-2) ... 395s Setting up libc6-dev:s390x (2.39-0ubuntu2) ... 395s Setting up curl (8.5.0-2ubuntu7) ... 395s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ... 395s Setting up libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu3) ... 395s Setting up openmpi-bin (4.1.6-6ubuntu1) ... 395s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 395s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 395s Setting up libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu3) ... 395s Setting up libnetcdf19t64:s390x (1:4.9.2-5ubuntu3) ... 395s Setting up libxft2:s390x (2.3.6-1) ... 395s Setting up libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 395s Setting up libglx0:s390x (1.7.0-1) ... 395s Setting up libproj25:s390x (9.3.1-1) ... 395s Setting up libtk8.6:s390x (8.6.13-2) ... 395s Setting up mpi-default-bin (1.15) ... 395s Setting up libgfortran-12-dev:s390x (12.3.0-15ubuntu1) ... 395s Setting up libtbb12:s390x (2021.11.0-2ubuntu2) ... 395s Setting up libcairo2:s390x (1.18.0-1) ... 395s Setting up libgl1:s390x (1.7.0-1) ... 395s Setting up gcc-12 (12.3.0-15ubuntu1) ... 395s Setting up libglew2.2:s390x (2.2.0-4) ... 395s Setting up libtheora0:s390x (1.1.1+dfsg.1-16.1) ... 395s Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... 395s Setting up gfortran-12 (12.3.0-15ubuntu1) ... 395s Setting up libvtk9.1t64:s390x (9.1.0+really9.1.0+dfsg2-7.1build2) ... 395s Setting up libkim-api2:s390x (2.3.0-1) ... 395s Setting up liblammps0t64:s390x (20240207+dfsg-1.1build2) ... 395s Setting up lammps (20240207+dfsg-1.1build2) ... 395s Setting up autopkgtest-satdep (0) ... 395s Processing triggers for systemd (255.2-3ubuntu2) ... 395s Processing triggers for man-db (2.12.0-3) ... 395s Processing triggers for libc-bin (2.39-0ubuntu2) ... 399s (Reading database ... 56236 files and directories currently installed.) 399s Removing autopkgtest-satdep (0) ... 399s autopkgtest [17:20:27]: test crack: [----------------------- 400s LAMMPS (7 Feb 2024 - Update 1) 400s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 400s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 400s using 1 OpenMP thread(s) per MPI task 400s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 400s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 400s 2 by 1 by 1 MPI processor grid 400s Created 8141 atoms 400s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 400s create_atoms CPU = 0.002 seconds 400s 302 atoms in group lower 400s 302 atoms in group upper 400s 604 atoms in group boundary 400s 7537 atoms in group mobile 400s 841 atoms in group leftupper 400s 841 atoms in group leftlower 400s Setting atom values ... 400s 841 settings made for type 400s Setting atom values ... 400s 841 settings made for type 400s Setting atom values ... 400s 302 settings made for type 400s Setting atom values ... 400s 302 settings made for type 400s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 400s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 400s Neighbor list info ... 400s update: every = 1 steps, delay = 5 steps, check = yes 400s max neighbors/atom: 2000, page size: 100000 400s master list distance cutoff = 2.8 400s ghost atom cutoff = 2.8 400s binsize = 1.4, bins = 80 56 1 400s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 400s (1) pair lj/cut, perpetual 400s attributes: half, newton on 400s pair build: half/bin/atomonly/newton 400s stencil: half/bin/2d 400s bin: standard 400s Setting up Verlet run ... 400s Unit style : lj 400s Current step : 0 400s Time step : 0.003 400s Per MPI rank memory allocation (min/avg/max) = 3.097 | 3.097 | 3.097 Mbytes 400s Step Temp E_pair E_mol TotEng Press Volume 400s 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 400s 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 401s 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 401s 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 402s 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 402s 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 403s 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 403s 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 404s 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 404s 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 405s 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 405s 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 406s 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 406s 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 407s 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 407s 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 408s 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 408s 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 409s 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 409s 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 410s 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 410s 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 411s 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 411s 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 412s 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 412s 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 412s Loop time of 12.2327 on 2 procs for 5000 steps with 8141 atoms 412s 412s Performance: 105945.715 tau/day, 408.741 timesteps/s, 3.328 Matom-step/s 412s 49.1% CPU use with 2 MPI tasks x 1 OpenMP threads 412s 412s MPI task timing breakdown: 412s Section | min time | avg time | max time |%varavg| %total 412s --------------------------------------------------------------- 412s Pair | 5.4651 | 5.5291 | 5.593 | 2.7 | 45.20 412s Neigh | 0.18242 | 0.18269 | 0.18296 | 0.1 | 1.49 412s Comm | 5.8418 | 6.054 | 6.2663 | 8.6 | 49.49 412s Output | 0.0032511 | 0.0038723 | 0.0044935 | 1.0 | 0.03 412s Modify | 0.23553 | 0.23832 | 0.24111 | 0.6 | 1.95 412s Other | | 0.2247 | | | 1.84 412s 412s Nlocal: 4070.5 ave 4085 max 4056 min 412s Histogram: 1 0 0 0 0 0 0 0 0 1 412s Nghost: 207 ave 208 max 206 min 412s Histogram: 1 0 0 0 0 0 0 0 0 1 412s Neighs: 35700 ave 35927 max 35473 min 412s Histogram: 1 0 0 0 0 0 0 0 0 1 412s 412s Total # of neighbors = 71400 412s Ave neighs/atom = 8.7704213 412s Neighbor list builds = 106 412s Dangerous builds = 0 412s Total wall time: 0:00:12 412s LAMMPS (7 Feb 2024 - Update 1) 423s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 423s using 1 OpenMP thread(s) per MPI task 423s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 423s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 423s 1 by 1 by 1 MPI processor grid 423s Created 8141 atoms 423s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 423s create_atoms CPU = 0.002 seconds 423s 302 atoms in group lower 423s 302 atoms in group upper 423s 604 atoms in group boundary 423s 7537 atoms in group mobile 423s 841 atoms in group leftupper 423s 841 atoms in group leftlower 423s Setting atom values ... 423s 841 settings made for type 423s Setting atom values ... 423s 841 settings made for type 423s Setting atom values ... 423s 302 settings made for type 423s Setting atom values ... 423s 302 settings made for type 423s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 423s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 423s Neighbor list info ... 423s update: every = 1 steps, delay = 5 steps, check = yes 423s max neighbors/atom: 2000, page size: 100000 423s master list distance cutoff = 2.8 423s ghost atom cutoff = 2.8 423s binsize = 1.4, bins = 80 56 1 423s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 423s (1) pair lj/cut, perpetual 423s attributes: half, newton on 423s pair build: half/bin/atomonly/newton 423s stencil: half/bin/2d 423s bin: standard 423s Setting up Verlet run ... 423s Unit style : lj 423s Current step : 0 423s Time step : 0.003 423s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 423s Step Temp E_pair E_mol TotEng Press Volume 423s 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 423s 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 423s 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 423s 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 423s 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 423s 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 423s 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 423s 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 423s 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 423s 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 423s 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 423s 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 423s 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 423s 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 423s 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 423s 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 423s 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 423s 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 423s 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 423s 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 423s 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 423s 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 423s 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 424s 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 424s 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 424s 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 424s Loop time of 11.7877 on 1 procs for 5000 steps with 8141 atoms 424s 424s Performance: 109945.462 tau/day, 424.172 timesteps/s, 3.453 Matom-step/s 424s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 424s 424s MPI task timing breakdown: 424s Section | min time | avg time | max time |%varavg| %total 424s --------------------------------------------------------------- 424s Pair | 10.87 | 10.87 | 10.87 | 0.0 | 92.22 424s Neigh | 0.33898 | 0.33898 | 0.33898 | 0.0 | 2.88 424s Comm | 0.0031014 | 0.0031014 | 0.0031014 | 0.0 | 0.03 424s Output | 0.0010622 | 0.0010622 | 0.0010622 | 0.0 | 0.01 424s Modify | 0.45008 | 0.45008 | 0.45008 | 0.0 | 3.82 424s Other | | 0.1244 | | | 1.06 424s 424s Nlocal: 8141 ave 8141 max 8141 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s Nghost: 0 ave 0 max 0 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s Neighs: 71389 ave 71389 max 71389 min 424s Histogram: 1 0 0 0 0 0 0 0 0 0 424s 424s Total # of neighbors = 71389 424s Ave neighs/atom = 8.7690701 424s Neighbor list builds = 100 424s Dangerous builds = 0 424s Total wall time: 0:00:11 424s run: OK 424s autopkgtest [17:20:52]: test crack: -----------------------] 425s crack PASS 425s autopkgtest [17:20:53]: test crack: - - - - - - - - - - results - - - - - - - - - - 425s autopkgtest [17:20:53]: test dipole: preparing testbed 426s Reading package lists... 427s Building dependency tree... 427s Reading state information... 427s Starting pkgProblemResolver with broken count: 0 427s Starting 2 pkgProblemResolver with broken count: 0 427s Done 427s The following NEW packages will be installed: 427s autopkgtest-satdep 427s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 427s Need to get 0 B/704 B of archives. 427s After this operation, 0 B of additional disk space will be used. 427s Get:1 /tmp/autopkgtest.ikRYZd/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 427s Selecting previously unselected package autopkgtest-satdep. 427s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56236 files and directories currently installed.) 427s Preparing to unpack .../2-autopkgtest-satdep.deb ... 427s Unpacking autopkgtest-satdep (0) ... 427s Setting up autopkgtest-satdep (0) ... 429s (Reading database ... 56236 files and directories currently installed.) 429s Removing autopkgtest-satdep (0) ... 430s autopkgtest [17:20:58]: test dipole: [----------------------- 430s LAMMPS (7 Feb 2024 - Update 1) 430s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 430s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 430s using 1 OpenMP thread(s) per MPI task 430s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 430s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 430s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 430s 2 by 1 by 1 MPI processor grid 430s Created 200 atoms 430s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 430s create_atoms CPU = 0.001 seconds 430s Setting atom values ... 430s 200 settings made for mass 430s Setting atom values ... 430s 200 settings made for dipole/random 430s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 430s Neighbor list info ... 430s update: every = 1 steps, delay = 0 steps, check = yes 430s max neighbors/atom: 2000, page size: 100000 430s master list distance cutoff = 2.8 430s ghost atom cutoff = 2.8 430s binsize = 1.4, bins = 13 13 2 430s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 430s (1) pair lj/cut/dipole/cut, perpetual 430s attributes: half, newton on 430s pair build: half/bin/atomonly/newton 430s stencil: half/bin/2d 430s bin: standard 430s Setting up Verlet run ... 430s Unit style : lj 430s Current step : 0 430s Time step : 0.005 430s Per MPI rank memory allocation (min/avg/max) = 5.049 | 5.049 | 5.049 Mbytes 430s Step Temp E_pair c_erot TotEng Press 430s 0 0 -2.1717485 0 -2.1717485 -2.5549017 430s 500 0.39555366 -2.8050759 0.22195366 -2.4115 -0.21605406 430s 1000 0.4062916 -2.8050542 0.22105842 -2.400794 -0.37250231 430s 1500 0.44946161 -2.8276171 0.20908634 -2.3804028 -0.19355614 430s 2000 0.41682174 -2.8150621 0.23053133 -2.4003244 -0.12755967 430s 2500 0.42226151 -2.7992773 0.21201574 -2.3791271 -0.42717565 430s 3000 0.40912644 -2.7687377 0.19983693 -2.3616569 0.13572202 430s 3500 0.43061123 -2.7771436 0.18913682 -2.3486855 -0.68871101 430s 4000 0.47642054 -2.8606122 0.23261313 -2.3865738 -0.26385194 430s 4500 0.43856522 -2.8161061 0.23395024 -2.3797337 -0.2451526 430s 5000 0.42765477 -2.8393865 0.27394472 -2.41387 -0.2578236 430s 5500 0.46375408 -2.8523674 0.26128049 -2.3909321 -0.074469682 431s 6000 0.37810306 -2.7407945 0.24127395 -2.364582 -0.017656351 431s 6500 0.40670883 -2.7670792 0.23827482 -2.3624039 -0.4153209 431s 7000 0.43381285 -2.7910058 0.24717951 -2.359362 -0.32827324 431s 7500 0.41395656 -2.7720326 0.24704428 -2.3601459 -0.31058846 431s 8000 0.42896544 -2.7586695 0.21848971 -2.3318489 -0.24582158 431s 8500 0.4159837 -2.7285922 0.20349242 -2.3146884 -0.21727121 431s 9000 0.43247532 -2.7365389 0.19865458 -2.306226 -0.13110924 431s 9500 0.4876086 -2.785822 0.20388831 -2.3006515 -0.080937633 431s 10000 0.42948035 -2.7655989 0.23832814 -2.3382659 -0.2360635 431s Loop time of 1.16587 on 2 procs for 10000 steps with 200 atoms 431s 431s Performance: 3705375.519 tau/day, 8577.258 timesteps/s, 1.715 Matom-step/s 431s 43.2% CPU use with 2 MPI tasks x 1 OpenMP threads 431s 431s MPI task timing breakdown: 431s Section | min time | avg time | max time |%varavg| %total 431s --------------------------------------------------------------- 431s Pair | 0.34058 | 0.35648 | 0.37238 | 2.7 | 30.58 431s Neigh | 0.02101 | 0.021686 | 0.022362 | 0.5 | 1.86 431s Comm | 0.66023 | 0.67944 | 0.69864 | 2.3 | 58.28 431s Output | 0.00082426 | 0.0011226 | 0.0014209 | 0.9 | 0.10 431s Modify | 0.042035 | 0.045787 | 0.04954 | 1.8 | 3.93 431s Other | | 0.06136 | | | 5.26 431s 431s Nlocal: 100 ave 103 max 97 min 431s Histogram: 1 0 0 0 0 0 0 0 0 1 431s Nghost: 125 ave 127 max 123 min 431s Histogram: 1 0 0 0 0 0 0 0 0 1 431s Neighs: 832 ave 852 max 812 min 431s Histogram: 1 0 0 0 0 0 0 0 0 1 431s 431s Total # of neighbors = 1664 431s Ave neighs/atom = 8.32 431s Neighbor list builds = 682 431s Dangerous builds = 0 431s Total wall time: 0:00:01 431s LAMMPS (7 Feb 2024 - Update 1) 432s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 432s using 1 OpenMP thread(s) per MPI task 432s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 432s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 432s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 432s 1 by 1 by 1 MPI processor grid 432s Created 200 atoms 432s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 432s create_atoms CPU = 0.000 seconds 432s Setting atom values ... 432s 200 settings made for mass 432s Setting atom values ... 432s 200 settings made for dipole/random 432s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 432s Neighbor list info ... 432s update: every = 1 steps, delay = 0 steps, check = yes 432s max neighbors/atom: 2000, page size: 100000 432s master list distance cutoff = 2.8 432s ghost atom cutoff = 2.8 432s binsize = 1.4, bins = 13 13 2 432s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 432s (1) pair lj/cut/dipole/cut, perpetual 432s attributes: half, newton on 432s pair build: half/bin/atomonly/newton 432s stencil: half/bin/2d 432s bin: standard 432s Setting up Verlet run ... 432s Unit style : lj 432s Current step : 0 432s Time step : 0.005 432s Per MPI rank memory allocation (min/avg/max) = 5.05 | 5.05 | 5.05 Mbytes 432s Step Temp E_pair c_erot TotEng Press 432s 0 0 -2.1717485 0 -2.1717485 -2.5549017 432s 500 0.39555366 -2.8050759 0.22195366 -2.4115 -0.21605406 432s 1000 0.4062916 -2.8050542 0.22105842 -2.400794 -0.37250231 432s 1500 0.44946161 -2.8276171 0.20908634 -2.3804028 -0.19355614 432s 2000 0.41682156 -2.815062 0.23053141 -2.4003245 -0.12755875 432s 2500 0.42249692 -2.7995109 0.2120131 -2.3791265 -0.42816448 432s 3000 0.41616758 -2.7781108 0.20164728 -2.364024 -0.020886314 432s 3500 0.45899292 -2.845444 0.21311649 -2.388746 -0.27031162 432s 4000 0.44192149 -2.8102242 0.2031683 -2.3705124 -0.16716401 432s 4500 0.50397271 -2.8780965 0.21354686 -2.3766437 -0.13676854 432s 5000 0.43620945 -2.7993403 0.2117878 -2.3653119 0.13226909 432s 5500 0.42861319 -2.7809996 0.2051046 -2.3545294 -0.19042969 432s 6000 0.46841814 -2.816026 0.19950812 -2.34995 -0.41629929 432s 6500 0.41697733 -2.7700652 0.20994527 -2.3551728 -0.27762295 432s 7000 0.45187547 -2.7823572 0.20168068 -2.3327412 -0.36487435 432s 7500 0.45027947 -2.8258363 0.25315235 -2.3778082 -0.30198681 432s 8000 0.45478856 -2.8289685 0.2494063 -2.3764539 0.02766223 432s 8500 0.47491136 -2.844227 0.24174939 -2.3716901 -0.18129259 432s 9000 0.40849079 -2.7425167 0.22352464 -2.3360684 -0.0069144283 432s 9500 0.41803515 -2.7832433 0.26484963 -2.3672983 -0.036254325 432s 10000 0.43935862 -2.7528327 0.22318819 -2.3156709 -0.14674506 432s Loop time of 0.90647 on 1 procs for 10000 steps with 200 atoms 432s 432s Performance: 4765738.381 tau/day, 11031.802 timesteps/s, 2.206 Matom-step/s 432s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 432s 432s MPI task timing breakdown: 432s Section | min time | avg time | max time |%varavg| %total 432s --------------------------------------------------------------- 432s Pair | 0.72378 | 0.72378 | 0.72378 | 0.0 | 79.85 432s Neigh | 0.042907 | 0.042907 | 0.042907 | 0.0 | 4.73 432s Comm | 0.034761 | 0.034761 | 0.034761 | 0.0 | 3.83 432s Output | 0.000138 | 0.000138 | 0.000138 | 0.0 | 0.02 432s Modify | 0.092107 | 0.092107 | 0.092107 | 0.0 | 10.16 432s Other | | 0.01277 | | | 1.41 432s 432s Nlocal: 200 ave 200 max 200 min 432s Histogram: 1 0 0 0 0 0 0 0 0 0 432s Nghost: 146 ave 146 max 146 min 432s Histogram: 1 0 0 0 0 0 0 0 0 0 432s Neighs: 1639 ave 1639 max 1639 min 432s Histogram: 1 0 0 0 0 0 0 0 0 0 432s 432s Total # of neighbors = 1639 432s Ave neighs/atom = 8.195 432s Neighbor list builds = 687 432s Dangerous builds = 0 432s Total wall time: 0:00:00 432s run: OK 432s /tmp/autopkgtest.ikRYZd/wrapper.sh: Killing leaked background processes: 4329 432s PID TTY STAT TIME COMMAND 432s /tmp/autopkgtest.ikRYZd/wrapper.sh: 235: kill: No such process 432s 432s /tmp/autopkgtest.ikRYZd/wrapper.sh: 237: kill: No such process 432s 432s autopkgtest [17:21:00]: test dipole: -----------------------] 433s dipole PASS 433s autopkgtest [17:21:01]: test dipole: - - - - - - - - - - results - - - - - - - - - - 433s autopkgtest [17:21:01]: test ellipse: preparing testbed 435s Reading package lists... 435s Building dependency tree... 435s Reading state information... 435s Starting pkgProblemResolver with broken count: 0 435s Starting 2 pkgProblemResolver with broken count: 0 435s Done 435s The following NEW packages will be installed: 435s autopkgtest-satdep 435s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 435s Need to get 0 B/708 B of archives. 435s After this operation, 0 B of additional disk space will be used. 435s Get:1 /tmp/autopkgtest.ikRYZd/3-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 435s Selecting previously unselected package autopkgtest-satdep. 436s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56236 files and directories currently installed.) 436s Preparing to unpack .../3-autopkgtest-satdep.deb ... 436s Unpacking autopkgtest-satdep (0) ... 436s Setting up autopkgtest-satdep (0) ... 437s (Reading database ... 56236 files and directories currently installed.) 437s Removing autopkgtest-satdep (0) ... 438s autopkgtest [17:21:06]: test ellipse: [----------------------- 438s LAMMPS (7 Feb 2024 - Update 1) 438s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 438s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 438s using 1 OpenMP thread(s) per MPI task 438s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 438s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 438s 2 by 1 by 1 MPI processor grid 438s Created 400 atoms 438s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 438s create_atoms CPU = 0.001 seconds 438s Setting atom values ... 438s 48 settings made for type/fraction 438s Setting atom values ... 438s 352 settings made for mass 438s Setting atom values ... 438s 48 settings made for mass 438s Setting atom values ... 438s 352 settings made for shape 438s Setting atom values ... 438s 48 settings made for shape 438s Setting atom values ... 438s 400 settings made for quat/random 438s 352 atoms in group spheroid 438s 438s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 438s 438s Your simulation uses code contributions which should be cited: 438s - pair gayberne command: doi:10.1063/1.3058435 438s The log file lists these citations in BibTeX format. 438s 438s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 438s 438s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 438s Neighbor list info ... 438s update: every = 1 steps, delay = 0 steps, check = yes 438s max neighbors/atom: 2000, page size: 100000 438s master list distance cutoff = 4.8 438s ghost atom cutoff = 4.8 438s binsize = 2.4, bins = 59 59 3 438s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 438s (1) pair gayberne, perpetual 438s attributes: half, newton on 438s pair build: half/bin/atomonly/newton 438s stencil: half/bin/2d 438s bin: standard 438s Setting up Verlet run ... 438s Unit style : lj 438s Current step : 0 438s Time step : 0.002 438s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 438s Step c_rot E_pair TotEng Press Volume 438s 0 2.2638298 0 2.394 0.04788 20000 438s 100 1.7507088 0 1.8513745 0.036020794 20558.953 438s 200 2.2704785 0 2.401031 0.046552815 20630.598 438s 300 1.862122 0 1.969194 0.042610426 18485.56 438s 400 2.1682285 -0.00033180079 2.2925698 0.06678177 13725.929 438s 500 1.9774167 -0.036688682 2.0543497 0.094267647 8509.1191 438s 600 2.0763332 -0.16712599 1.8943547 0.22454815 4686.7174 438s 700 2.2031637 -0.65167903 1.505138 0.69461503 2513.4867 438s 800 1.9076177 -1.6161536 0.26664447 1.2006561 1456.0639 438s 900 2.1654872 -3.098663 -1.0127947 2.3547814 962.22026 439s 1000 1.5697203 -4.290219 -2.7475676 2.2081575 780.13242 439s 1100 1.8639391 -4.8401808 -2.9839514 1.6435411 731.64362 439s 1200 2.148214 -4.559462 -2.3813692 1.2926066 761.90913 439s 1300 1.756056 -4.1199781 -2.4086474 0.55480157 830.59257 439s 1400 2.2520217 -3.9967432 -1.7251673 1.0840012 891.1767 439s 1500 1.7403402 -3.6959497 -1.9315447 0.69094077 980.77988 439s 1600 2.2198668 -3.40679 -1.2069637 0.83252434 1063.6253 439s 1700 1.8937862 -3.2995933 -1.4123785 0.15689916 1142.2427 439s 1800 2.0788606 -3.2740111 -1.2135595 0.8266016 1170.2029 439s 1900 2.0093512 -3.3688564 -1.3754478 0.50483334 1173.9086 439s 2000 1.9784272 -3.3396694 -1.3888911 0.80497674 1149.0282 439s Loop time of 1.35334 on 2 procs for 2000 steps with 400 atoms 439s 439s Performance: 255368.649 tau/day, 1477.828 timesteps/s, 591.131 katom-step/s 439s 45.7% CPU use with 2 MPI tasks x 1 OpenMP threads 439s 439s MPI task timing breakdown: 439s Section | min time | avg time | max time |%varavg| %total 439s --------------------------------------------------------------- 439s Pair | 0.42075 | 0.44292 | 0.4651 | 3.3 | 32.73 439s Neigh | 0.014326 | 0.014389 | 0.014451 | 0.1 | 1.06 439s Comm | 0.58141 | 0.60329 | 0.62518 | 2.8 | 44.58 439s Output | 0.027986 | 0.028075 | 0.028165 | 0.1 | 2.07 439s Modify | 0.20919 | 0.21192 | 0.21464 | 0.6 | 15.66 439s Other | | 0.05274 | | | 3.90 439s 439s Nlocal: 200 ave 227 max 173 min 439s Histogram: 1 0 0 0 0 0 0 0 0 1 439s Nghost: 204 ave 206 max 202 min 439s Histogram: 1 0 0 0 0 0 0 0 0 1 439s Neighs: 1479.5 ave 1784 max 1175 min 439s Histogram: 1 0 0 0 0 0 0 0 0 1 439s 439s Total # of neighbors = 2959 439s Ave neighs/atom = 7.3975 439s Neighbor list builds = 348 439s Dangerous builds = 0 439s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 439s Setting up Verlet run ... 439s Unit style : lj 439s Current step : 2000 439s Time step : 0.002 439s Per MPI rank memory allocation (min/avg/max) = 6.9 | 6.9 | 6.9 Mbytes 439s Step c_rot E_pair TotEng Press Volume 439s 2000 1.9784272 -3.3396694 -1.3888911 0.80497674 1149.0282 440s 2100 1.9413656 -3.2989879 -1.344805 1.1581912 1149.0282 440s 2200 1.9590367 -3.3182662 -1.3678333 0.35910433 1149.0282 440s 2300 2.0250309 -3.3891121 -1.3644964 0.46285769 1149.0282 440s 2400 2.085533 -3.4551199 -1.3401904 0.61189864 1149.0282 440s 2500 2.077574 -3.4482359 -1.3340251 1.0190852 1149.0282 440s 2600 2.0840722 -3.4558292 -1.3514352 0.7597702 1149.0282 440s 2700 2.1174248 -3.4915978 -1.3720622 0.82088405 1149.0282 440s 2800 2.0120484 -3.3803498 -1.3351386 1.0472272 1149.0282 440s 2900 2.095772 -3.4692917 -1.3762115 0.6503267 1149.0282 440s 3000 2.005185 -3.3743963 -1.3771538 0.74858505 1149.0282 440s 3100 2.0635196 -3.4375558 -1.3792354 0.72379626 1149.0282 440s 3200 2.0131468 -3.3825952 -1.3703433 1.1087307 1149.0282 441s 3300 2.0467878 -3.4185419 -1.3532024 0.7400243 1149.0282 441s 3400 1.9629403 -3.328306 -1.3871127 0.78865882 1149.0282 441s 3500 2.0576813 -3.4288036 -1.3361687 0.72305492 1149.0282 441s 3600 1.9638286 -3.3256476 -1.3663274 0.83792378 1149.0282 441s 3700 1.9900562 -3.3535764 -1.3259922 0.4389563 1149.0282 441s 3800 1.9016735 -3.2598525 -1.3493967 0.56256005 1149.0282 441s 3900 2.002131 -3.3658151 -1.3768647 0.59924524 1149.0282 441s 4000 1.9750784 -3.33731 -1.3724406 0.70702486 1149.0282 441s Loop time of 1.69191 on 2 procs for 2000 steps with 400 atoms 441s 441s Performance: 204265.641 tau/day, 1182.093 timesteps/s, 472.837 katom-step/s 441s 40.9% CPU use with 2 MPI tasks x 1 OpenMP threads 441s 441s MPI task timing breakdown: 441s Section | min time | avg time | max time |%varavg| %total 441s --------------------------------------------------------------- 441s Pair | 0.42342 | 0.56121 | 0.699 | 18.4 | 33.17 441s Neigh | 0.0026019 | 0.0035719 | 0.004542 | 1.6 | 0.21 441s Comm | 0.81256 | 0.96668 | 1.1208 | 15.7 | 57.14 441s Output | 0.031959 | 0.032406 | 0.032853 | 0.2 | 1.92 441s Modify | 0.057699 | 0.072996 | 0.088292 | 5.7 | 4.31 441s Other | | 0.05505 | | | 3.25 441s 441s Nlocal: 200 ave 242 max 158 min 441s Histogram: 1 0 0 0 0 0 0 0 0 1 441s Nghost: 186 ave 206 max 166 min 441s Histogram: 1 0 0 0 0 0 0 0 0 1 441s Neighs: 1548.5 ave 2045 max 1052 min 441s Histogram: 1 0 0 0 0 0 0 0 0 1 441s 441s Total # of neighbors = 3097 441s Ave neighs/atom = 7.7425 441s Neighbor list builds = 48 441s Dangerous builds = 0 441s Total wall time: 0:00:03 441s LAMMPS (7 Feb 2024 - Update 1) 442s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 442s using 1 OpenMP thread(s) per MPI task 442s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 442s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 442s 1 by 1 by 1 MPI processor grid 442s Created 400 atoms 442s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 442s create_atoms CPU = 0.000 seconds 442s Setting atom values ... 442s 48 settings made for type/fraction 442s Setting atom values ... 442s 352 settings made for mass 442s Setting atom values ... 442s 48 settings made for mass 442s Setting atom values ... 442s 352 settings made for shape 442s Setting atom values ... 442s 48 settings made for shape 442s Setting atom values ... 442s 400 settings made for quat/random 442s 352 atoms in group spheroid 442s 442s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 442s 442s Your simulation uses code contributions which should be cited: 442s - pair gayberne command: doi:10.1063/1.3058435 442s The log file lists these citations in BibTeX format. 442s 442s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 442s 442s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 442s Neighbor list info ... 442s update: every = 1 steps, delay = 0 steps, check = yes 442s max neighbors/atom: 2000, page size: 100000 442s master list distance cutoff = 4.8 442s ghost atom cutoff = 4.8 442s binsize = 2.4, bins = 59 59 3 442s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 442s (1) pair gayberne, perpetual 442s attributes: half, newton on 442s pair build: half/bin/atomonly/newton 442s stencil: half/bin/2d 442s bin: standard 442s Setting up Verlet run ... 442s Unit style : lj 442s Current step : 0 442s Time step : 0.002 442s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 442s Step c_rot E_pair TotEng Press Volume 442s 0 2.2638298 0 2.394 0.04788 20000 442s 100 1.7507088 0 1.8513745 0.036020794 20558.953 442s 200 2.2704785 0 2.401031 0.046552815 20630.598 442s 300 1.862122 0 1.969194 0.042610426 18485.56 442s 400 2.1682285 -0.00033180079 2.2925698 0.06678177 13725.929 442s 500 1.9774167 -0.036688682 2.0543497 0.094267647 8509.1191 442s 600 2.0763332 -0.16712599 1.8943547 0.22454815 4686.7174 442s 700 2.2031637 -0.65167903 1.505138 0.69461503 2513.4867 442s 800 1.9076177 -1.6161536 0.26664447 1.2006561 1456.0639 442s 900 2.1654872 -3.098663 -1.0127947 2.3547814 962.22026 442s 1000 1.5697203 -4.290219 -2.7475676 2.2081575 780.13242 442s 1100 1.8639391 -4.8401808 -2.9839514 1.6435411 731.64362 442s 1200 2.148214 -4.559462 -2.3813692 1.2926066 761.90913 442s 1300 1.756056 -4.1199781 -2.4086474 0.55480157 830.59257 442s 1400 2.2520217 -3.9967432 -1.7251673 1.0840012 891.1767 442s 1500 1.7403402 -3.6959497 -1.9315447 0.69094077 980.77988 442s 1600 2.2198668 -3.40679 -1.2069637 0.83252434 1063.6253 442s 1700 1.8937862 -3.2995933 -1.4123785 0.15689916 1142.2427 442s 1800 2.0788606 -3.2740111 -1.2135595 0.8266016 1170.2029 442s 1900 2.0093512 -3.3688564 -1.3754478 0.50483334 1173.9086 442s 2000 1.9784272 -3.3396694 -1.3888912 0.8049767 1149.0282 442s Loop time of 1.15806 on 1 procs for 2000 steps with 400 atoms 442s 442s Performance: 298428.915 tau/day, 1727.019 timesteps/s, 690.808 katom-step/s 442s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads 442s 442s MPI task timing breakdown: 442s Section | min time | avg time | max time |%varavg| %total 442s --------------------------------------------------------------- 442s Pair | 0.86495 | 0.86495 | 0.86495 | 0.0 | 74.69 444s Neigh | 0.028314 | 0.028314 | 0.028314 | 0.0 | 2.44 444s Comm | 0.010167 | 0.010167 | 0.010167 | 0.0 | 0.88 444s Output | 0.024126 | 0.024126 | 0.024126 | 0.0 | 2.08 444s Modify | 0.22528 | 0.22528 | 0.22528 | 0.0 | 19.45 444s Other | | 0.005226 | | | 0.45 444s 444s Nlocal: 400 ave 400 max 400 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s Nghost: 255 ave 255 max 255 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s Neighs: 2959 ave 2959 max 2959 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s 444s Total # of neighbors = 2959 444s Ave neighs/atom = 7.3975 444s Neighbor list builds = 348 444s Dangerous builds = 0 444s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 444s Setting up Verlet run ... 444s Unit style : lj 444s Current step : 2000 444s Time step : 0.002 444s Per MPI rank memory allocation (min/avg/max) = 6.926 | 6.926 | 6.926 Mbytes 444s Step c_rot E_pair TotEng Press Volume 444s 2000 1.9784272 -3.3396694 -1.3888912 0.8049767 1149.0282 444s 2100 1.9413656 -3.2989879 -1.344805 1.1581912 1149.0282 444s 2200 1.9590368 -3.3182663 -1.3678333 0.35910425 1149.0282 444s 2300 2.0250308 -3.3891119 -1.3644964 0.46285779 1149.0282 444s 2400 2.0855331 -3.45512 -1.3401904 0.61189841 1149.0282 444s 2500 2.0775737 -3.4482356 -1.3340258 1.0190836 1149.0282 444s 2600 2.084072 -3.4558289 -1.3514359 0.75976918 1149.0282 444s 2700 2.1174308 -3.4916046 -1.3720664 0.82086811 1149.0282 444s 2800 2.0120441 -3.3803491 -1.3351469 1.047208 1149.0282 444s 2900 2.0957766 -3.4692999 -1.376208 0.65043335 1149.0282 444s 3000 2.00512 -3.3743288 -1.3771585 0.7487656 1149.0282 444s 3100 2.0635277 -3.4376031 -1.3792202 0.72375619 1149.0282 444s 3200 2.0130716 -3.3825107 -1.3702334 1.1098674 1149.0282 444s 3300 2.0463568 -3.4179583 -1.3534773 0.73871011 1149.0282 444s 3400 1.9649348 -3.3304023 -1.3860539 0.77548498 1149.0282 444s 3500 2.0501941 -3.4213612 -1.3373407 0.73278199 1149.0282 444s 3600 1.9881829 -3.3519947 -1.3795107 0.73402726 1149.0282 444s 3700 1.9994085 -3.3655341 -1.3599281 0.3911747 1149.0282 444s 3800 1.963869 -3.3264036 -1.3599099 0.50519594 1149.0282 444s 3900 1.9970107 -3.3624111 -1.3743885 1.0960718 1149.0282 444s 4000 2.0620245 -3.4315752 -1.3998675 0.54966642 1149.0282 444s Loop time of 1.29441 on 1 procs for 2000 steps with 400 atoms 444s 444s Performance: 266994.269 tau/day, 1545.106 timesteps/s, 618.042 katom-step/s 444s 99.1% CPU use with 1 MPI tasks x 1 OpenMP threads 444s 444s MPI task timing breakdown: 444s Section | min time | avg time | max time |%varavg| %total 444s --------------------------------------------------------------- 444s Pair | 1.1039 | 1.1039 | 1.1039 | 0.0 | 85.29 444s Neigh | 0.0075257 | 0.0075257 | 0.0075257 | 0.0 | 0.58 444s Comm | 0.010666 | 0.010666 | 0.010666 | 0.0 | 0.82 444s Output | 0.025227 | 0.025227 | 0.025227 | 0.0 | 1.95 444s Modify | 0.14248 | 0.14248 | 0.14248 | 0.0 | 11.01 444s Other | | 0.004565 | | | 0.35 444s 444s Nlocal: 400 ave 400 max 400 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s Nghost: 240 ave 240 max 240 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s Neighs: 3096 ave 3096 max 3096 min 444s Histogram: 1 0 0 0 0 0 0 0 0 0 444s 444s Total # of neighbors = 3096 444s Ave neighs/atom = 7.74 444s Neighbor list builds = 49 444s Dangerous builds = 0 444s Total wall time: 0:00:02 444s LAMMPS (7 Feb 2024 - Update 1) 444s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 444s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 444s using 1 OpenMP thread(s) per MPI task 444s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 444s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 444s 2 by 1 by 1 MPI processor grid 444s Created 400 atoms 444s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 444s create_atoms CPU = 0.001 seconds 444s Setting atom values ... 444s 48 settings made for type/fraction 444s Setting atom values ... 444s 352 settings made for mass 444s Setting atom values ... 444s 48 settings made for mass 444s Setting atom values ... 444s 352 settings made for shape 444s Setting atom values ... 444s 48 settings made for shape 444s Setting atom values ... 444s 400 settings made for quat/random 444s 352 atoms in group spheroid 444s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 444s Neighbor list info ... 444s update: every = 1 steps, delay = 0 steps, check = yes 444s max neighbors/atom: 2000, page size: 100000 444s master list distance cutoff = 4.8 444s ghost atom cutoff = 4.8 444s binsize = 2.4, bins = 59 59 3 444s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 444s (1) pair resquared, perpetual 444s attributes: half, newton on 444s pair build: half/bin/atomonly/newton 444s stencil: half/bin/2d 444s bin: standard 444s Setting up Verlet run ... 444s Unit style : lj 444s Current step : 0 444s Time step : 0.002 444s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 444s Step c_rot E_pair TotEng Press Volume 444s 0 2.2638298 0 2.394 0.04788 20000 444s 100 1.7507088 0 1.8513745 0.036020794 20558.953 444s 200 2.2704785 0 2.401031 0.046552815 20630.598 444s 300 1.862122 0 1.969194 0.042610426 18485.56 444s 400 2.1681648 -1.8025253e-05 2.2928162 0.066815262 13725.945 444s 500 1.9796533 0.011266483 2.1047446 0.10930999 8512.0962 444s 600 2.0381815 0.05520958 2.0768422 0.26593572 4768.9024 444s 700 2.2849402 0.25892126 2.4973312 1.1619 2735.0739 444s 800 1.4992869 0.22469187 1.6806361 1.2886286 1869.4273 444s 900 2.0547415 0.27250933 2.2614984 1.9975339 1555.2406 445s 1000 1.6926518 0.1458468 1.8205892 1.178465 1587.0462 445s 1100 2.2566757 0.10550322 2.3422895 0.95295253 1829.1762 445s 1200 1.7863944 0.052794099 1.8022676 0.50915281 2274.7198 445s 1300 2.1812168 0.052256594 2.1840651 0.45260879 2829.8629 445s 1400 1.9144744 0.03819752 1.9088776 0.32361118 3307.992 445s 1500 2.0960168 0.05105678 2.1054249 0.35884692 3466.0213 445s 1600 2.0672237 0.058048371 2.1030277 0.39835548 3217.6206 445s 1700 1.9868599 0.15133448 2.1051513 0.73337678 2689.3862 446s 1800 2.1036353 0.19793253 2.2839145 1.1035796 2171.6175 446s 1900 1.8399343 0.15530012 2.0123427 1.0727888 1823.0596 446s 2000 2.1390853 0.25173897 2.4016008 1.7950213 1625.5704 446s Loop time of 2.05948 on 2 procs for 2000 steps with 400 atoms 446s 446s Performance: 167809.219 tau/day, 971.118 timesteps/s, 388.447 katom-step/s 446s 47.2% CPU use with 2 MPI tasks x 1 OpenMP threads 446s 446s MPI task timing breakdown: 446s Section | min time | avg time | max time |%varavg| %total 446s --------------------------------------------------------------- 446s Pair | 0.79171 | 0.79498 | 0.79825 | 0.4 | 38.60 446s Neigh | 0.01495 | 0.015587 | 0.016223 | 0.5 | 0.76 446s Comm | 0.94685 | 0.9497 | 0.95255 | 0.3 | 46.11 446s Output | 0.030051 | 0.030149 | 0.030247 | 0.1 | 1.46 446s Modify | 0.2152 | 0.21548 | 0.21577 | 0.1 | 10.46 446s Other | | 0.05358 | | | 2.60 446s 446s Nlocal: 200 ave 206 max 194 min 446s Histogram: 1 0 0 0 0 0 0 0 0 1 446s Nghost: 166 ave 172 max 160 min 446s Histogram: 1 0 0 0 0 0 0 0 0 1 446s Neighs: 990.5 ave 1028 max 953 min 446s Histogram: 1 0 0 0 0 0 0 0 0 1 446s 446s Total # of neighbors = 1981 446s Ave neighs/atom = 4.9525 446s Neighbor list builds = 410 446s Dangerous builds = 0 446s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 446s Setting up Verlet run ... 446s Unit style : lj 446s Current step : 2000 446s Time step : 0.002 446s Per MPI rank memory allocation (min/avg/max) = 6.89 | 6.89 | 6.89 Mbytes 446s Step c_rot E_pair TotEng Press Volume 446s 2000 2.1390853 0.25173897 2.4016008 1.7950213 1625.5704 446s 2100 2.2262008 0.15960391 2.3610768 1.3398437 1625.5704 446s 2200 2.1759925 0.21281154 2.4217703 1.547288 1625.5704 446s 2300 2.2426044 0.14235411 2.3796419 1.3063731 1625.5704 447s 2400 2.1909516 0.1968467 2.3277677 1.5131631 1625.5704 447s 2500 2.1396456 0.25118294 2.3450649 1.7231479 1625.5704 447s 2600 2.1724989 0.21652796 2.36624 1.5785682 1625.5704 447s 2700 2.1347133 0.2565462 2.3819962 1.7939756 1625.5704 447s 2800 2.2187273 0.16767707 2.3890091 1.3803388 1625.5704 448s 2900 2.2653117 0.11841424 2.358481 1.1423479 1625.5704 448s 3000 2.1965681 0.19125616 2.3687823 1.55014 1625.5704 448s 3100 2.1970501 0.19052613 2.3694703 1.4706426 1625.5704 448s 3200 2.1661439 0.22324214 2.3939177 1.619691 1625.5704 448s 3300 2.1298288 0.26157991 2.3997036 1.8700501 1625.5704 448s 3400 2.1293647 0.26220526 2.373699 1.7332686 1625.5704 449s 3500 2.1835494 0.20483304 2.4031724 1.5471088 1625.5704 449s 3600 2.1875445 0.20049079 2.4159533 1.5995253 1625.5704 449s 3700 2.1186666 0.27351639 2.4141913 1.9057949 1625.5704 449s 3800 2.1752149 0.2136072 2.3067948 1.5705518 1625.5704 449s 3900 2.1976482 0.18993383 2.4017837 1.4844827 1625.5704 449s 4000 2.1788977 0.20960933 2.3437572 1.576965 1625.5704 449s Loop time of 3.50464 on 2 procs for 2000 steps with 400 atoms 449s 449s Performance: 98612.170 tau/day, 570.672 timesteps/s, 228.269 katom-step/s 449s 47.5% CPU use with 2 MPI tasks x 1 OpenMP threads 449s 449s MPI task timing breakdown: 449s Section | min time | avg time | max time |%varavg| %total 449s --------------------------------------------------------------- 449s Pair | 1.4889 | 1.5568 | 1.6247 | 5.4 | 44.42 449s Neigh | 0.0030024 | 0.003061 | 0.0031195 | 0.1 | 0.09 449s Comm | 1.7267 | 1.7952 | 1.8638 | 5.1 | 51.22 449s Output | 0.029277 | 0.029635 | 0.029994 | 0.2 | 0.85 449s Modify | 0.070551 | 0.072277 | 0.074002 | 0.6 | 2.06 449s Other | | 0.0476 | | | 1.36 449s 449s Nlocal: 200 ave 207 max 193 min 449s Histogram: 1 0 0 0 0 0 0 0 0 1 449s Nghost: 162.5 ave 165 max 160 min 449s Histogram: 1 0 0 0 0 0 0 0 0 1 449s Neighs: 966 ave 1009 max 923 min 449s Histogram: 1 0 0 0 0 0 0 0 0 1 449s 449s Total # of neighbors = 1932 449s Ave neighs/atom = 4.83 449s Neighbor list builds = 50 449s Dangerous builds = 0 449s Total wall time: 0:00:05 450s LAMMPS (7 Feb 2024 - Update 1) 451s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 451s using 1 OpenMP thread(s) per MPI task 451s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 451s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 451s 1 by 1 by 1 MPI processor grid 451s Created 400 atoms 451s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 451s create_atoms CPU = 0.000 seconds 451s Setting atom values ... 451s 48 settings made for type/fraction 451s Setting atom values ... 451s 352 settings made for mass 451s Setting atom values ... 451s 48 settings made for mass 451s Setting atom values ... 451s 352 settings made for shape 451s Setting atom values ... 451s 48 settings made for shape 451s Setting atom values ... 451s 400 settings made for quat/random 451s 352 atoms in group spheroid 451s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 451s Neighbor list info ... 451s update: every = 1 steps, delay = 0 steps, check = yes 451s max neighbors/atom: 2000, page size: 100000 451s master list distance cutoff = 4.8 451s ghost atom cutoff = 4.8 451s binsize = 2.4, bins = 59 59 3 451s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 451s (1) pair resquared, perpetual 451s attributes: half, newton on 451s pair build: half/bin/atomonly/newton 451s stencil: half/bin/2d 451s bin: standard 451s Setting up Verlet run ... 451s Unit style : lj 451s Current step : 0 451s Time step : 0.002 451s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 451s Step c_rot E_pair TotEng Press Volume 451s 0 2.2638298 0 2.394 0.04788 20000 451s 100 1.7507088 0 1.8513745 0.036020794 20558.953 451s 200 2.2704785 0 2.401031 0.046552815 20630.598 451s 300 1.862122 0 1.969194 0.042610426 18485.56 451s 400 2.1681648 -1.8025253e-05 2.2928162 0.066815262 13725.945 451s 500 1.9796533 0.011266483 2.1047446 0.10930999 8512.0962 451s 600 2.0381815 0.05520958 2.0768422 0.26593572 4768.9024 451s 700 2.2849402 0.25892126 2.4973312 1.1619 2735.0739 451s 800 1.4992869 0.22469187 1.6806361 1.2886286 1869.4273 451s 900 2.0547415 0.27250933 2.2614984 1.9975339 1555.2406 451s 1000 1.6926518 0.1458468 1.8205892 1.178465 1587.0462 451s 1100 2.2566757 0.10550322 2.3422895 0.95295253 1829.1762 451s 1200 1.7863944 0.052794099 1.8022676 0.50915281 2274.7198 451s 1300 2.1812168 0.052256594 2.1840651 0.45260879 2829.8629 451s 1400 1.9144744 0.03819752 1.9088776 0.32361118 3307.992 451s 1500 2.0960168 0.05105678 2.1054249 0.35884692 3466.0213 451s 1600 2.0672237 0.058048371 2.1030277 0.39835548 3217.6206 451s 1700 1.9868599 0.15133448 2.1051513 0.73337678 2689.3862 451s 1800 2.1036353 0.19793253 2.2839145 1.1035796 2171.6175 451s 1900 1.8399343 0.15530012 2.0123427 1.0727888 1823.0596 451s 2000 2.1390853 0.25173897 2.4016008 1.7950213 1625.5704 451s Loop time of 1.8273 on 1 procs for 2000 steps with 400 atoms 451s 451s Performance: 189131.185 tau/day, 1094.509 timesteps/s, 437.804 katom-step/s 451s 99.3% CPU use with 1 MPI tasks x 1 OpenMP threads 451s 451s MPI task timing breakdown: 451s Section | min time | avg time | max time |%varavg| %total 451s --------------------------------------------------------------- 451s Pair | 1.5416 | 1.5416 | 1.5416 | 0.0 | 84.36 451s Neigh | 0.027956 | 0.027956 | 0.027956 | 0.0 | 1.53 451s Comm | 0.0078185 | 0.0078185 | 0.0078185 | 0.0 | 0.43 451s Output | 0.024266 | 0.024266 | 0.024266 | 0.0 | 1.33 451s Modify | 0.22062 | 0.22062 | 0.22062 | 0.0 | 12.07 455s Other | | 0.005067 | | | 0.28 455s 455s Nlocal: 400 ave 400 max 400 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s Nghost: 214 ave 214 max 214 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s Neighs: 1981 ave 1981 max 1981 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s 455s Total # of neighbors = 1981 455s Ave neighs/atom = 4.9525 455s Neighbor list builds = 410 455s Dangerous builds = 0 455s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 455s Setting up Verlet run ... 455s Unit style : lj 455s Current step : 2000 455s Time step : 0.002 455s Per MPI rank memory allocation (min/avg/max) = 6.917 | 6.917 | 6.917 Mbytes 455s Step c_rot E_pair TotEng Press Volume 455s 2000 2.1390853 0.25173897 2.4016008 1.7950213 1625.5704 455s 2100 2.2262008 0.15960391 2.3610768 1.3398437 1625.5704 455s 2200 2.1759925 0.21281154 2.4217703 1.547288 1625.5704 455s 2300 2.2426044 0.14235411 2.3796419 1.3063731 1625.5704 455s 2400 2.1909516 0.1968467 2.3277677 1.5131631 1625.5704 455s 2500 2.1396456 0.25118295 2.3450649 1.7231479 1625.5704 455s 2600 2.1724989 0.21652796 2.3662399 1.5785682 1625.5704 455s 2700 2.1347133 0.25654622 2.3819962 1.7939757 1625.5704 455s 2800 2.2187273 0.16767709 2.3890091 1.3803389 1625.5704 455s 2900 2.2653117 0.1184142 2.3584809 1.1423477 1625.5704 455s 3000 2.1965682 0.19125607 2.3687823 1.5501394 1625.5704 455s 3100 2.1970503 0.19052592 2.3694702 1.4706415 1625.5704 455s 3200 2.1661438 0.22324217 2.393918 1.619691 1625.5704 455s 3300 2.1298268 0.26158212 2.3997056 1.8700704 1625.5704 455s 3400 2.129366 0.26220387 2.3736989 1.7332623 1625.5704 455s 3500 2.1835467 0.20483593 2.4031735 1.5471227 1625.5704 455s 3600 2.187532 0.20050401 2.4159602 1.5996363 1625.5704 455s 3700 2.1186808 0.2735013 2.4141937 1.9057216 1625.5704 455s 3800 2.1752481 0.21357202 2.3067618 1.5703983 1625.5704 455s 3900 2.1976728 0.18990792 2.4017814 1.4843601 1625.5704 455s 4000 2.1786303 0.20989248 2.3438733 1.578595 1625.5704 455s Loop time of 3.18709 on 1 procs for 2000 steps with 400 atoms 455s 455s Performance: 108437.561 tau/day, 627.532 timesteps/s, 251.013 katom-step/s 455s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 455s 455s MPI task timing breakdown: 455s Section | min time | avg time | max time |%varavg| %total 455s --------------------------------------------------------------- 455s Pair | 3.0075 | 3.0075 | 3.0075 | 0.0 | 94.37 455s Neigh | 0.0055234 | 0.0055234 | 0.0055234 | 0.0 | 0.17 455s Comm | 0.0083902 | 0.0083902 | 0.0083902 | 0.0 | 0.26 455s Output | 0.024381 | 0.024381 | 0.024381 | 0.0 | 0.76 455s Modify | 0.13708 | 0.13708 | 0.13708 | 0.0 | 4.30 455s Other | | 0.004212 | | | 0.13 455s 455s Nlocal: 400 ave 400 max 400 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s Nghost: 208 ave 208 max 208 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s Neighs: 1932 ave 1932 max 1932 min 455s Histogram: 1 0 0 0 0 0 0 0 0 0 455s 455s Total # of neighbors = 1932 455s Ave neighs/atom = 4.83 455s Neighbor list builds = 50 455s Dangerous builds = 0 455s Total wall time: 0:00:05 455s run: OK 455s autopkgtest [17:21:23]: test ellipse: -----------------------] 455s autopkgtest [17:21:23]: test ellipse: - - - - - - - - - - results - - - - - - - - - - 455s ellipse PASS 456s autopkgtest [17:21:24]: test flow: preparing testbed 458s Reading package lists... 459s Building dependency tree... 459s Reading state information... 459s Starting pkgProblemResolver with broken count: 0 459s Starting 2 pkgProblemResolver with broken count: 0 459s Done 459s The following NEW packages will be installed: 459s autopkgtest-satdep 459s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 459s Need to get 0 B/708 B of archives. 459s After this operation, 0 B of additional disk space will be used. 459s Get:1 /tmp/autopkgtest.ikRYZd/4-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 459s Selecting previously unselected package autopkgtest-satdep. 459s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56236 files and directories currently installed.) 459s Preparing to unpack .../4-autopkgtest-satdep.deb ... 459s Unpacking autopkgtest-satdep (0) ... 459s Setting up autopkgtest-satdep (0) ... 461s (Reading database ... 56236 files and directories currently installed.) 461s Removing autopkgtest-satdep (0) ... 462s autopkgtest [17:21:30]: test flow: [----------------------- 462s LAMMPS (7 Feb 2024 - Update 1) 462s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 462s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 462s using 1 OpenMP thread(s) per MPI task 462s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 462s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 462s 2 by 1 by 1 MPI processor grid 462s Created 420 atoms 462s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 462s create_atoms CPU = 0.001 seconds 462s 60 atoms in group lower 462s 60 atoms in group upper 462s 120 atoms in group boundary 462s 300 atoms in group flow 462s Setting atom values ... 462s 60 settings made for type 462s Setting atom values ... 462s 60 settings made for type 462s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 462s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 462s Neighbor list info ... 462s update: every = 1 steps, delay = 5 steps, check = yes 462s max neighbors/atom: 2000, page size: 100000 462s master list distance cutoff = 1.42246 462s ghost atom cutoff = 1.42246 462s binsize = 0.71123, bins = 37 32 1 462s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 462s (1) pair lj/cut, perpetual 462s attributes: half, newton on 462s pair build: half/bin/atomonly/newton 462s stencil: half/bin/2d 462s bin: standard 462s Setting up Verlet run ... 462s Unit style : lj 462s Current step : 0 462s Time step : 0.003 462s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 462s Step Temp E_pair E_mol TotEng Press Volume 462s 0 1 0 0 0.71190476 0.52314537 571.54286 462s 500 1.0951876 -0.33403931 0 0.44562996 3.2502319 571.54286 462s 1000 1 -0.3731019 0 0.33880286 2.8561715 571.54286 462s 1500 1.0366879 -0.36031105 0 0.37771198 3.0196355 571.54286 462s 2000 1 -0.41053025 0 0.30137451 2.8651905 571.54286 462s 2500 1.1226126 -0.37018872 0 0.42900451 2.9459225 571.54286 462s 3000 1 -0.40149829 0 0.31040647 2.7056256 571.54286 462s 3500 1.071429 -0.46774125 0 0.29501417 2.5582838 571.54286 462s 4000 1 -0.39054248 0 0.32136228 2.4314528 571.54286 462s 4500 1.029458 -0.40311018 0 0.32976584 2.5012442 571.54286 462s 5000 1 -0.44252019 0 0.26938457 2.3566317 571.54286 462s 5500 1.0715559 -0.4771158 0 0.28572997 2.420979 571.54286 462s 6000 1 -0.42490153 0 0.28700323 2.4032097 571.54286 462s 6500 1.1729217 -0.43515146 0 0.39985708 2.3670704 571.54286 462s 7000 1 -0.4539943 0 0.25791046 2.36148 571.54286 462s 7500 1.1676524 -0.40784405 0 0.42341328 2.699336 571.54286 462s 8000 1 -0.37626352 0 0.33564124 2.8174026 571.54286 462s 8500 1.1583539 -0.41258281 0 0.41205487 2.6617634 571.54286 462s 9000 1 -0.42918407 0 0.28272069 2.3090418 571.54286 462s 9500 1.0432103 -0.39042315 0 0.3522432 2.6910698 571.54286 462s 10000 1 -0.4676995 0 0.24420526 2.3898708 571.54286 462s Loop time of 0.49895 on 2 procs for 10000 steps with 420 atoms 462s 462s Performance: 5194908.716 tau/day, 20042.086 timesteps/s, 8.418 Matom-step/s 462s 38.1% CPU use with 2 MPI tasks x 1 OpenMP threads 462s 462s MPI task timing breakdown: 462s Section | min time | avg time | max time |%varavg| %total 462s --------------------------------------------------------------- 462s Pair | 0.078259 | 0.078655 | 0.079052 | 0.1 | 15.76 462s Neigh | 0.031806 | 0.031887 | 0.031969 | 0.0 | 6.39 462s Comm | 0.30872 | 0.30882 | 0.30893 | 0.0 | 61.89 462s Output | 0.0012576 | 0.0018495 | 0.0024413 | 1.4 | 0.37 462s Modify | 0.034818 | 0.034881 | 0.034944 | 0.0 | 6.99 462s Other | | 0.04285 | | | 8.59 462s 462s Nlocal: 210 ave 214 max 206 min 462s Histogram: 1 0 0 0 0 0 0 0 0 1 462s Nghost: 51 ave 52 max 50 min 462s Histogram: 1 0 0 0 0 0 0 0 0 1 462s Neighs: 472 ave 494 max 450 min 462s Histogram: 1 0 0 0 0 0 0 0 0 1 462s 462s Total # of neighbors = 944 462s Ave neighs/atom = 2.247619 462s Neighbor list builds = 994 462s Dangerous builds = 0 462s Total wall time: 0:00:00 463s LAMMPS (7 Feb 2024 - Update 1) 463s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 463s using 1 OpenMP thread(s) per MPI task 463s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 463s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 463s 1 by 1 by 1 MPI processor grid 463s Created 420 atoms 463s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 463s create_atoms CPU = 0.000 seconds 463s 60 atoms in group lower 463s 60 atoms in group upper 463s 120 atoms in group boundary 463s 300 atoms in group flow 463s Setting atom values ... 463s 60 settings made for type 463s Setting atom values ... 463s 60 settings made for type 463s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 463s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 463s Neighbor list info ... 463s update: every = 1 steps, delay = 5 steps, check = yes 463s max neighbors/atom: 2000, page size: 100000 463s master list distance cutoff = 1.42246 463s ghost atom cutoff = 1.42246 463s binsize = 0.71123, bins = 37 32 1 463s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 463s (1) pair lj/cut, perpetual 463s attributes: half, newton on 463s pair build: half/bin/atomonly/newton 463s stencil: half/bin/2d 463s bin: standard 463s Setting up Verlet run ... 463s Unit style : lj 463s Current step : 0 463s Time step : 0.003 463s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 463s Step Temp E_pair E_mol TotEng Press Volume 463s 0 1 0 0 0.71190476 0.52314537 571.54286 463s 500 1.0644427 -0.31382888 0 0.44395296 3.0013076 571.54286 463s 1000 1 -0.42965445 0 0.28225032 2.9612165 571.54286 463s 1500 1.0739874 -0.41189772 0 0.35267901 2.5621951 571.54286 463s 2000 1 -0.40814262 0 0.30376214 2.9229597 571.54286 463s 2500 1.193035 -0.38493995 0 0.46438736 2.8340607 571.54286 463s 3000 1 -0.45564537 0 0.2562594 2.7506498 571.54286 463s 3500 1.0626882 -0.45013361 0 0.30639918 2.5530157 571.54286 463s 4000 1 -0.39613722 0 0.31576755 2.4669827 571.54286 463s 4500 1.0832856 -0.43003699 0 0.34115919 2.2569491 571.54286 463s 5000 1 -0.42733451 0 0.28457025 2.4685826 571.54286 463s 5500 1.0413391 -0.39346589 0 0.34786835 2.6348761 571.54286 463s 6000 1 -0.42845926 0 0.2834455 2.4988125 571.54286 463s 6500 1.0890296 -0.43775517 0 0.33753016 2.4384217 571.54286 463s 7000 1 -0.46023483 0 0.25166993 2.4429964 571.54286 463s 7500 1.0644341 -0.45175861 0 0.3060171 2.4324515 571.54286 463s 8000 1 -0.43920605 0 0.27269871 2.6469713 571.54286 463s 8500 1.0647184 -0.45399641 0 0.3039817 2.5748114 571.54286 463s 9000 1 -0.46453995 0 0.24736482 2.6591355 571.54286 463s 9500 1.0123 -0.44029216 0 0.28036906 2.413597 571.54286 463s 10000 1 -0.43826448 0 0.27364028 2.3699706 571.54286 463s Loop time of 0.302505 on 1 procs for 10000 steps with 420 atoms 463s 463s Performance: 8568458.626 tau/day, 33057.325 timesteps/s, 13.884 Matom-step/s 463s 97.5% CPU use with 1 MPI tasks x 1 OpenMP threads 463s 463s MPI task timing breakdown: 463s Section | min time | avg time | max time |%varavg| %total 463s --------------------------------------------------------------- 463s Pair | 0.15877 | 0.15877 | 0.15877 | 0.0 | 52.49 463s Neigh | 0.062265 | 0.062265 | 0.062265 | 0.0 | 20.58 463s Comm | 0.0065962 | 0.0065962 | 0.0065962 | 0.0 | 2.18 463s Output | 0.00011594 | 0.00011594 | 0.00011594 | 0.0 | 0.04 463s Modify | 0.060946 | 0.060946 | 0.060946 | 0.0 | 20.15 463s Other | | 0.01381 | | | 4.56 463s 463s Nlocal: 420 ave 420 max 420 min 463s Histogram: 1 0 0 0 0 0 0 0 0 0 463s Nghost: 50 ave 50 max 50 min 463s Histogram: 1 0 0 0 0 0 0 0 0 0 463s Neighs: 946 ave 946 max 946 min 463s Histogram: 1 0 0 0 0 0 0 0 0 0 463s 463s Total # of neighbors = 946 463s Ave neighs/atom = 2.252381 463s Neighbor list builds = 979 463s Dangerous builds = 0 463s Total wall time: 0:00:00 463s LAMMPS (7 Feb 2024 - Update 1) 463s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 463s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 463s using 1 OpenMP thread(s) per MPI task 463s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 463s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 463s 2 by 1 by 1 MPI processor grid 463s Created 420 atoms 463s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 463s create_atoms CPU = 0.001 seconds 463s 60 atoms in group lower 463s 60 atoms in group upper 463s 120 atoms in group boundary 463s 300 atoms in group flow 463s Setting atom values ... 463s 60 settings made for type 463s Setting atom values ... 463s 60 settings made for type 463s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 463s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 463s Neighbor list info ... 463s update: every = 1 steps, delay = 5 steps, check = yes 463s max neighbors/atom: 2000, page size: 100000 463s master list distance cutoff = 1.42246 463s ghost atom cutoff = 1.42246 463s binsize = 0.71123, bins = 37 32 1 463s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 463s (1) pair lj/cut, perpetual 463s attributes: half, newton on 463s pair build: half/bin/atomonly/newton 463s stencil: half/bin/2d 463s bin: standard 463s Setting up Verlet run ... 463s Unit style : lj 463s Current step : 0 463s Time step : 0.003 463s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 463s Step Temp E_pair E_mol TotEng Press Volume 463s 0 1 0 0 0.71190476 0.52314537 571.54286 463s 500 1.0758737 -0.36090417 0 0.40501541 2.7822308 575.0659 463s 1000 1 -0.35701441 0 0.35489035 2.0575313 585.71407 463s 1500 1.2368663 -0.37709732 0 0.50343367 1.4865879 587.193 463s 2000 1 -0.39362939 0 0.31827537 1.4236 578.9418 463s 2500 1.2272957 -0.42381901 0 0.44989865 1.4544608 570.15856 463s 3000 1 -0.4914342 0 0.22047056 1.534595 554.98633 463s 3500 1.2444794 -0.59760758 0 0.2883432 1.8754993 537.01599 463s 4000 1 -0.69890444 0 0.013000318 2.1406234 521.49815 463s 4500 1.2188346 -0.74991278 0 0.1177814 2.7508733 507.73977 463s 5000 1 -0.7445329 0 -0.032628135 3.1054873 501.68859 463s 5500 1.1836415 -0.76775125 0 0.074888789 2.6990153 506.01181 463s 6000 1 -0.7575268 0 -0.04562204 2.4858442 508.26846 463s 6500 1.2076032 -0.68884147 0 0.17085699 2.3143206 512.291 463s 7000 1 -0.66241571 0 0.049489051 2.0686009 516.38744 464s 7500 1.2123711 -0.71994819 0 0.14314459 2.1753937 513.88371 464s 8000 1 -0.71001477 0 0.0018899921 2.0630419 509.80458 464s 8500 1.1991563 -0.78355267 0 0.070132412 2.493712 504.22835 464s 9000 1 -0.72719051 0 -0.015285749 2.27793 505.75742 464s 9500 1.2073739 -0.76518329 0 0.094351911 2.5653732 503.29071 464s 10000 1 -0.78638614 0 -0.074481378 2.3564468 504.38491 464s Loop time of 0.581655 on 2 procs for 10000 steps with 420 atoms 464s 464s Performance: 4456251.206 tau/day, 17192.327 timesteps/s, 7.221 Matom-step/s 464s 38.2% CPU use with 2 MPI tasks x 1 OpenMP threads 464s 464s MPI task timing breakdown: 464s Section | min time | avg time | max time |%varavg| %total 464s --------------------------------------------------------------- 464s Pair | 0.091159 | 0.091297 | 0.091436 | 0.0 | 15.70 464s Neigh | 0.018776 | 0.018849 | 0.018922 | 0.1 | 3.24 464s Comm | 0.29632 | 0.29647 | 0.29663 | 0.0 | 50.97 464s Output | 0.0006107 | 0.00093363 | 0.0012566 | 0.0 | 0.16 464s Modify | 0.11842 | 0.1196 | 0.12077 | 0.3 | 20.56 464s Other | | 0.05451 | | | 9.37 464s 464s Nlocal: 210 ave 211 max 209 min 464s Histogram: 1 0 0 0 0 0 0 0 0 1 464s Nghost: 50 ave 51 max 49 min 464s Histogram: 1 0 0 0 0 0 0 0 0 1 464s Neighs: 563.5 ave 569 max 558 min 464s Histogram: 1 0 0 0 0 0 0 0 0 1 464s 464s Total # of neighbors = 1127 464s Ave neighs/atom = 2.6833333 464s Neighbor list builds = 560 464s Dangerous builds = 0 464s Total wall time: 0:00:00 464s LAMMPS (7 Feb 2024 - Update 1) 464s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 464s using 1 OpenMP thread(s) per MPI task 464s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 464s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 464s 1 by 1 by 1 MPI processor grid 464s Created 420 atoms 464s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 464s create_atoms CPU = 0.000 seconds 464s 60 atoms in group lower 464s 60 atoms in group upper 464s 120 atoms in group boundary 464s 300 atoms in group flow 464s Setting atom values ... 464s 60 settings made for type 464s Setting atom values ... 464s 60 settings made for type 464s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 464s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 464s Neighbor list info ... 464s update: every = 1 steps, delay = 5 steps, check = yes 464s max neighbors/atom: 2000, page size: 100000 464s master list distance cutoff = 1.42246 464s ghost atom cutoff = 1.42246 464s binsize = 0.71123, bins = 37 32 1 464s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 464s (1) pair lj/cut, perpetual 464s attributes: half, newton on 464s pair build: half/bin/atomonly/newton 464s stencil: half/bin/2d 464s bin: standard 464s Setting up Verlet run ... 464s Unit style : lj 464s Current step : 0 464s Time step : 0.003 464s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 464s Step Temp E_pair E_mol TotEng Press Volume 464s 0 1 0 0 0.71190476 0.52314537 571.54286 464s 500 1.0990751 -0.36396768 0 0.41846911 2.522517 575.55806 464s 1000 1 -0.34609791 0 0.36580685 1.9736175 584.67179 464s 1500 1.2112861 -0.39062708 0 0.47169327 1.521881 587.24778 464s 2000 1 -0.39956949 0 0.31233527 1.2496669 583.00676 464s 2500 1.2236323 -0.40128447 0 0.46982521 1.427689 570.03729 464s 3000 1 -0.48849374 0 0.22341102 1.5091345 553.64637 464s 3500 1.2404604 -0.63017693 0 0.25291274 1.7681156 535.22588 464s 4000 1 -0.71303348 0 -0.001128721 2.2083475 516.7312 464s 4500 1.2316246 -0.77421749 0 0.10258194 2.5788522 503.1817 464s 5000 1 -0.7999552 0 -0.088050433 3.1546066 498.48431 464s 5500 1.2347442 -0.74592478 0 0.13309548 2.695455 502.87799 464s 6000 1 -0.67044678 0 0.041457981 2.2074541 513.82275 464s 6500 1.2102356 -0.63751404 0 0.22405846 1.9921588 517.21223 464s 7000 1 -0.65043667 0 0.061468095 1.8816222 517.22883 464s 7500 1.2366099 -0.68011129 0 0.20023717 2.0387578 515.33777 464s 8000 1 -0.72046833 0 -0.0085635721 2.1380846 510.42066 464s 8500 1.2219154 -0.79786917 0 0.072018214 2.2824348 503.99311 464s 9000 1 -0.78517366 0 -0.073268895 2.6920699 500.15016 464s 9500 1.1934208 -0.7468438 0 0.10275813 2.4971524 501.17896 464s 10000 1 -0.67478993 0 0.037114833 2.3681765 504.37054 464s Loop time of 0.354241 on 1 procs for 10000 steps with 420 atoms 464s 464s Performance: 7317054.519 tau/day, 28229.377 timesteps/s, 11.856 Matom-step/s 464s 95.0% CPU use with 1 MPI tasks x 1 OpenMP threads 464s 464s MPI task timing breakdown: 464s Section | min time | avg time | max time |%varavg| %total 464s --------------------------------------------------------------- 464s Pair | 0.18348 | 0.18348 | 0.18348 | 0.0 | 51.80 464s Neigh | 0.03708 | 0.03708 | 0.03708 | 0.0 | 10.47 464s Comm | 0.0057073 | 0.0057073 | 0.0057073 | 0.0 | 1.61 464s Output | 0.00017803 | 0.00017803 | 0.00017803 | 0.0 | 0.05 464s Modify | 0.11379 | 0.11379 | 0.11379 | 0.0 | 32.12 464s Other | | 0.01401 | | | 3.95 464s 464s Nlocal: 420 ave 420 max 420 min 464s Histogram: 1 0 0 0 0 0 0 0 0 0 464s Nghost: 51 ave 51 max 51 min 464s Histogram: 1 0 0 0 0 0 0 0 0 0 464s Neighs: 1150 ave 1150 max 1150 min 464s Histogram: 1 0 0 0 0 0 0 0 0 0 464s 464s Total # of neighbors = 1150 464s Ave neighs/atom = 2.7380952 464s Neighbor list builds = 563 464s Dangerous builds = 0 464s Total wall time: 0:00:00 464s run: OK 465s autopkgtest [17:21:33]: test flow: -----------------------] 465s autopkgtest [17:21:33]: test flow: - - - - - - - - - - results - - - - - - - - - - 465s flow PASS 465s autopkgtest [17:21:33]: test friction: preparing testbed 467s Reading package lists... 467s Building dependency tree... 467s Reading state information... 467s Starting pkgProblemResolver with broken count: 0 467s Starting 2 pkgProblemResolver with broken count: 0 467s Done 467s The following NEW packages will be installed: 467s autopkgtest-satdep 467s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 467s Need to get 0 B/708 B of archives. 467s After this operation, 0 B of additional disk space will be used. 467s Get:1 /tmp/autopkgtest.ikRYZd/5-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [708 B] 468s Selecting previously unselected package autopkgtest-satdep. 468s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56236 files and directories currently installed.) 468s Preparing to unpack .../5-autopkgtest-satdep.deb ... 468s Unpacking autopkgtest-satdep (0) ... 468s Setting up autopkgtest-satdep (0) ... 469s (Reading database ... 56236 files and directories currently installed.) 469s Removing autopkgtest-satdep (0) ... 470s autopkgtest [17:21:38]: test friction: [----------------------- 470s LAMMPS (7 Feb 2024 - Update 1) 470s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 470s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 470s using 1 OpenMP thread(s) per MPI task 470s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 470s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 470s 2 by 1 by 1 MPI processor grid 470s Created 750 atoms 470s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 470s create_atoms CPU = 0.001 seconds 470s Created 750 atoms 470s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 470s create_atoms CPU = 0.000 seconds 470s Created 112 atoms 470s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 470s create_atoms CPU = 0.001 seconds 470s Created 112 atoms 470s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 470s create_atoms CPU = 0.001 seconds 470s 750 atoms in group lo 470s 862 atoms in group lo 470s 750 atoms in group hi 470s 862 atoms in group hi 470s 150 atoms in group lo-fixed 470s 150 atoms in group hi-fixed 470s 300 atoms in group boundary 470s 1424 atoms in group mobile 470s Setting atom values ... 470s 150 settings made for type 470s Setting atom values ... 470s 150 settings made for type 470s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 470s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 470s Neighbor list info ... 470s update: every = 1 steps, delay = 5 steps, check = yes 470s max neighbors/atom: 2000, page size: 100000 470s master list distance cutoff = 2.8 470s ghost atom cutoff = 2.8 470s binsize = 1.4, bins = 41 31 1 470s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 470s (1) pair lj/cut, perpetual 470s attributes: half, newton on 470s pair build: half/bin/atomonly/newton 470s stencil: half/bin/2d 470s bin: standard 470s Setting up Verlet run ... 470s Unit style : lj 470s Current step : 0 470s Time step : 0.0025 470s Per MPI rank memory allocation (min/avg/max) = 3.05 | 3.05 | 3.05 Mbytes 470s Step Temp E_pair E_mol TotEng Press Volume 470s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 471s 1000 0.081091635 -3.0930924 0 -3.0596257 -0.030127914 2444.9333 471s 2000 0.082087761 -3.0850474 0 -3.0511696 -0.44306626 2444.9333 472s 3000 0.088948343 -3.08139 0 -3.0446807 -0.25586469 2444.9333 472s 4000 0.091186493 -3.0656845 0 -3.0280515 -0.10060397 2444.9333 473s 5000 0.10802896 -3.0566391 0 -3.0120553 -0.13618814 2444.9333 473s 6000 0.1 -3.0489246 0 -3.0076543 -0.20314788 2444.9333 474s 7000 0.11587085 -3.0413277 0 -2.9935075 -0.37543775 2444.9333 475s 8000 0.1 -3.029647 0 -2.9883767 -0.41884104 2444.9333 475s 9000 0.11588457 -3.0253422 0 -2.9775163 -0.43584065 2444.9333 476s 10000 0.1 -3.0293042 0 -2.9880339 -0.36809832 2444.9333 476s 11000 0.11830962 -3.029318 0 -2.9804913 -0.44710474 2444.9333 477s 12000 0.1 -3.0283785 0 -2.9871082 -0.20225766 2444.9333 477s 13000 0.11646107 -3.0351824 0 -2.9871185 -0.46506235 2444.9333 478s 14000 0.11264391 -3.0399048 0 -2.9934163 -0.23851225 2444.9333 478s 15000 0.11397557 -3.0400714 0 -2.9930333 -0.27494778 2444.9333 479s 16000 0.11527553 -3.0423634 0 -2.9947889 -0.27314794 2444.9333 479s 17000 0.11820003 -3.0419531 0 -2.9931715 -0.39533728 2444.9333 480s 18000 0.11165087 -3.0494285 0 -3.0033499 -0.25447692 2444.9333 481s 19000 0.11450729 -3.0488755 0 -3.0016179 -0.27183418 2444.9333 481s 20000 0.1090499 -3.0490281 0 -3.0040229 -0.39612969 2444.9333 481s Loop time of 10.9961 on 2 procs for 20000 steps with 1724 atoms 481s 481s Performance: 392867.671 tau/day, 1818.832 timesteps/s, 3.136 Matom-step/s 481s 45.9% CPU use with 2 MPI tasks x 1 OpenMP threads 481s 481s MPI task timing breakdown: 481s Section | min time | avg time | max time |%varavg| %total 481s --------------------------------------------------------------- 481s Pair | 4.1154 | 4.4217 | 4.7281 | 14.6 | 40.21 481s Neigh | 0.18911 | 0.20441 | 0.21972 | 3.4 | 1.86 481s Comm | 5.5408 | 5.8801 | 6.2194 | 14.0 | 53.47 481s Output | 0.0010793 | 0.0023172 | 0.0035552 | 2.6 | 0.02 481s Modify | 0.22293 | 0.23902 | 0.25512 | 3.3 | 2.17 481s Other | | 0.2485 | | | 2.26 481s 481s Nlocal: 862 ave 874 max 850 min 481s Histogram: 1 0 0 0 0 0 0 0 0 1 481s Nghost: 165.5 ave 166 max 165 min 481s Histogram: 1 0 0 0 0 0 0 0 0 1 481s Neighs: 7198 ave 7283 max 7113 min 481s Histogram: 1 0 0 0 0 0 0 0 0 1 481s 481s Total # of neighbors = 14396 481s Ave neighs/atom = 8.350348 481s Neighbor list builds = 720 481s Dangerous builds = 0 481s Total wall time: 0:00:11 481s LAMMPS (7 Feb 2024 - Update 1) 491s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 491s using 1 OpenMP thread(s) per MPI task 491s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 491s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 491s 1 by 1 by 1 MPI processor grid 491s Created 750 atoms 491s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 491s create_atoms CPU = 0.001 seconds 491s Created 750 atoms 491s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 491s create_atoms CPU = 0.000 seconds 491s Created 112 atoms 491s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 491s create_atoms CPU = 0.000 seconds 491s Created 112 atoms 491s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 491s create_atoms CPU = 0.000 seconds 491s 750 atoms in group lo 491s 862 atoms in group lo 491s 750 atoms in group hi 491s 862 atoms in group hi 491s 150 atoms in group lo-fixed 491s 150 atoms in group hi-fixed 491s 300 atoms in group boundary 491s 1424 atoms in group mobile 491s Setting atom values ... 491s 150 settings made for type 491s Setting atom values ... 491s 150 settings made for type 491s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 491s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 491s Neighbor list info ... 491s update: every = 1 steps, delay = 5 steps, check = yes 491s max neighbors/atom: 2000, page size: 100000 491s master list distance cutoff = 2.8 491s ghost atom cutoff = 2.8 491s binsize = 1.4, bins = 41 31 1 491s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 491s (1) pair lj/cut, perpetual 491s attributes: half, newton on 491s pair build: half/bin/atomonly/newton 491s stencil: half/bin/2d 491s bin: standard 491s Setting up Verlet run ... 491s Unit style : lj 491s Current step : 0 491s Time step : 0.0025 491s Per MPI rank memory allocation (min/avg/max) = 3.059 | 3.059 | 3.059 Mbytes 491s Step Temp E_pair E_mol TotEng Press Volume 491s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 491s 1000 0.1 -3.0915072 0 -3.0502369 0.0099866805 2444.9333 491s 2000 0.1 -3.0826007 0 -3.0413304 -0.41998885 2444.9333 491s 3000 0.08982505 -3.0757908 0 -3.0387197 -0.25244271 2444.9333 491s 4000 0.098727892 -3.0666371 0 -3.0258918 -0.25382683 2444.9333 491s 5000 0.11345478 -3.0506905 0 -3.0038674 -0.029177812 2444.9333 491s 6000 0.11386723 -3.0515296 0 -3.0045363 -0.32135016 2444.9333 491s 7000 0.11555642 -3.0379879 0 -2.9902974 -0.40431662 2444.9333 491s 8000 0.10658321 -3.036405 0 -2.9924178 -0.4572299 2444.9333 491s 9000 0.11648934 -3.0271687 0 -2.9790932 -0.45898613 2444.9333 491s 10000 0.10677611 -3.0303232 0 -2.9862564 -0.35269781 2444.9333 491s 11000 0.11746006 -3.0346344 0 -2.9861583 -0.46341365 2444.9333 491s 12000 0.112074 -3.036913 0 -2.9906597 -0.21768573 2444.9333 491s 13000 0.11249017 -3.0395382 0 -2.9931132 -0.44391864 2444.9333 491s 14000 0.11381248 -3.0362108 0 -2.9892401 -0.30885868 2444.9333 491s 15000 0.10964575 -3.0436265 0 -2.9983754 -0.26625672 2444.9333 491s 16000 0.10798733 -3.0460787 0 -3.001512 -0.27971711 2444.9333 491s 17000 0.11191725 -3.0455618 0 -2.9993732 -0.36993854 2444.9333 491s 18000 0.11418143 -3.0485595 0 -3.0014364 -0.24776847 2444.9333 491s 19000 0.11028213 -3.0473558 0 -3.001842 -0.30249398 2444.9333 491s 20000 0.11512925 -3.0504969 0 -3.0029827 -0.36022205 2444.9333 491s Loop time of 9.81419 on 1 procs for 20000 steps with 1724 atoms 491s 491s Performance: 440178.898 tau/day, 2037.865 timesteps/s, 3.513 Matom-step/s 491s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 491s 491s MPI task timing breakdown: 491s Section | min time | avg time | max time |%varavg| %total 491s --------------------------------------------------------------- 491s Pair | 8.811 | 8.811 | 8.811 | 0.0 | 89.78 491s Neigh | 0.40279 | 0.40279 | 0.40279 | 0.0 | 4.10 491s Comm | 0.028205 | 0.028205 | 0.028205 | 0.0 | 0.29 491s Output | 0.00072823 | 0.00072823 | 0.00072823 | 0.0 | 0.01 491s Modify | 0.46135 | 0.46135 | 0.46135 | 0.0 | 4.70 491s Other | | 0.1102 | | | 1.12 491s 491s Nlocal: 1724 ave 1724 max 1724 min 491s Histogram: 1 0 0 0 0 0 0 0 0 0 491s Nghost: 145 ave 145 max 145 min 491s Histogram: 1 0 0 0 0 0 0 0 0 0 491s Neighs: 14397 ave 14397 max 14397 min 491s Histogram: 1 0 0 0 0 0 0 0 0 0 491s 491s Total # of neighbors = 14397 491s Ave neighs/atom = 8.3509281 491s Neighbor list builds = 723 491s Dangerous builds = 0 491s Total wall time: 0:00:09 491s run: OK 491s autopkgtest [17:21:59]: test friction: -----------------------] 492s autopkgtest [17:22:00]: test friction: - - - - - - - - - - results - - - - - - - - - - 492s friction PASS 492s autopkgtest [17:22:00]: test hugo: preparing testbed 493s Reading package lists... 494s Building dependency tree... 494s Reading state information... 494s Starting pkgProblemResolver with broken count: 0 494s Starting 2 pkgProblemResolver with broken count: 0 494s Done 494s The following NEW packages will be installed: 494s autopkgtest-satdep 494s 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. 494s Need to get 0 B/704 B of archives. 494s After this operation, 0 B of additional disk space will be used. 494s Get:1 /tmp/autopkgtest.ikRYZd/6-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 494s Selecting previously unselected package autopkgtest-satdep. 494s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56236 files and directories currently installed.) 494s Preparing to unpack .../6-autopkgtest-satdep.deb ... 494s Unpacking autopkgtest-satdep (0) ... 494s Setting up autopkgtest-satdep (0) ... 496s (Reading database ... 56236 files and directories currently installed.) 496s Removing autopkgtest-satdep (0) ... 497s autopkgtest [17:22:05]: test hugo: [----------------------- 497s LAMMPS (7 Feb 2024 - Update 1) 497s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 497s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 497s using 1 OpenMP thread(s) per MPI task 497s Lattice spacing in x,y,z = 1.4142135 2 2 497s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 497s 1 by 1 by 2 MPI processor grid 497s Created 1000 atoms 497s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 497s create_atoms CPU = 0.001 seconds 497s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 497s Neighbor list info ... 497s update: every = 1 steps, delay = 0 steps, check = yes 497s max neighbors/atom: 2000, page size: 100000 497s master list distance cutoff = 1.8475372 497s ghost atom cutoff = 1.8475372 497s binsize = 0.92376862, bins = 8 11 11 497s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 497s (1) pair lj/cubic, perpetual 497s attributes: half, newton on 497s pair build: half/bin/atomonly/newton 497s stencil: half/bin/3d 497s bin: standard 497s Setting up cg style minimization ... 497s Unit style : lj 497s Current step : 0 497s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 497s (src/min.cpp:219) 497s Per MPI rank memory allocation (min/avg/max) = 4.237 | 4.237 | 4.237 Mbytes 497s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 497s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 497s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 497s 134 0 -6.3344253 -6.3344253 -4.2957391e-13 -4.6556764e-13 -4.6545223e-13 6.9780267 9.8684199 9.8684199 497s Loop time of 0.113287 on 2 procs for 134 steps with 1000 atoms 497s 497s 44.5% CPU use with 2 MPI tasks x 1 OpenMP threads 497s 497s Minimization stats: 497s Stopping criterion = force tolerance 497s Energy initial, next-to-last, final = 497s -6.29375358358574 -6.33442531515467 -6.33442531515467 497s Force two-norm initial, final = 3395.2895 5.526433e-10 497s Force max component initial, final = 1960.2713 3.2059964e-10 497s Final line search alpha, max atom move = 1 3.2059964e-10 497s Iterations, force evaluations = 134 137 497s 497s MPI task timing breakdown: 497s Section | min time | avg time | max time |%varavg| %total 497s --------------------------------------------------------------- 497s Pair | 0.035618 | 0.039122 | 0.042626 | 1.8 | 34.53 497s Neigh | 0.00056946 | 0.00060986 | 0.00065026 | 0.0 | 0.54 497s Comm | 0.049898 | 0.053403 | 0.056908 | 1.5 | 47.14 497s Output | 4.2028e-05 | 6.4258e-05 | 8.6489e-05 | 0.0 | 0.06 497s Modify | 0 | 0 | 0 | 0.0 | 0.00 497s Other | | 0.02009 | | | 17.73 497s 497s Nlocal: 500 ave 550 max 450 min 497s Histogram: 1 0 0 0 0 0 0 0 0 1 497s Nghost: 1214 ave 1264 max 1164 min 497s Histogram: 1 0 0 0 0 0 0 0 0 1 497s Neighs: 10500 ave 11550 max 9450 min 497s Histogram: 1 0 0 0 0 0 0 0 0 1 497s 497s Total # of neighbors = 21000 497s Ave neighs/atom = 21 497s Neighbor list builds = 1 497s Dangerous builds = 0 497s System init for write_restart ... 497s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 497s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 497s using 1 OpenMP thread(s) per MPI task 497s Reading restart file ... 497s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 497s restoring atom style atomic from restart 497s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 497s 1 by 1 by 2 MPI processor grid 497s restoring pair style lj/cubic from restart 497s 1000 atoms 497s read_restart CPU = 0.001 seconds 497s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 497s Neighbor list info ... 497s update: every = 1 steps, delay = 0 steps, check = yes 497s max neighbors/atom: 2000, page size: 100000 497s master list distance cutoff = 1.7475372 497s ghost atom cutoff = 1.7475372 497s binsize = 0.87376862, bins = 8 12 12 497s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 497s (1) pair lj/cubic, perpetual 497s attributes: half, newton on 497s pair build: half/bin/atomonly/newton 497s stencil: half/bin/3d 497s bin: standard 497s Setting up Verlet run ... 497s Unit style : lj 497s Current step : 0 497s Time step : 0.001 497s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 497s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 497s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 498s 1000 0.010266754 0.015384732 -2.1717334 -4183.9192 129.07798 58.489025 8.3141524 -4.1817628 0.9362044 23.511491 3.7372332 499s 2000 0.40259797 0.60329306 -5.627962 -1085.8312 12.843116 1.8560907 9.4470663 -1.0808065 -0.37219276 14.040385 0.6226867 499s 3000 0.47352764 0.70958118 -3.847268 -3270.82 65.659321 23.910002 8.6682025 -3.2676824 -0.14827512 19.052005 2.3460318 500s 4000 0.51027892 0.76465296 -4.3666607 -2668.4808 36.299422 5.4253511 8.7365217 -2.6648788 -0.43242827 14.580921 1.6947004 501s 5000 0.27107084 0.40619965 -4.8148544 -1808.6901 35.499158 7.8616668 8.7438741 -1.8042815 -0.17683868 14.465657 1.6705446 502s 6000 0.14589565 0.21862463 -4.1603429 -2363.5903 43.618418 5.9789884 8.3935297 -2.3596486 -0.050591412 14.026367 2.1169125 503s 7000 0.085822195 0.12860456 -4.2874019 -2281.4454 40.483746 3.874914 8.3489633 -2.2772866 -0.011160894 13.315551 2.0696635 504s 8000 0.039594243 0.059331974 -4.3555951 -2176.8532 39.840893 3.7201608 8.3381853 -2.1725569 0.028292259 13.163321 2.0603537 505s 9000 0.025376486 0.038026664 -4.2983996 -2330.0794 39.628092 2.631482 8.2935294 -2.3258191 0.032864503 12.942681 2.084285 505s 10000 0.020305022 0.030427075 -4.2090968 -1864.3718 42.005843 3.1326248 8.2404246 -1.8601931 0.074717463 13.108473 2.1814026 505s Loop time of 8.55631 on 2 procs for 10000 steps with 1000 atoms 505s 505s Performance: 100978.112 tau/day, 1168.728 timesteps/s, 1.169 Matom-step/s 505s 46.6% CPU use with 2 MPI tasks x 1 OpenMP threads 505s 505s MPI task timing breakdown: 505s Section | min time | avg time | max time |%varavg| %total 505s --------------------------------------------------------------- 505s Pair | 3.2206 | 3.24 | 3.2594 | 1.1 | 37.87 505s Neigh | 0.11692 | 0.11925 | 0.12157 | 0.7 | 1.39 505s Comm | 4.083 | 4.1003 | 4.1176 | 0.9 | 47.92 505s Output | 0.0010631 | 0.0011754 | 0.0012878 | 0.3 | 0.01 505s Modify | 0.93795 | 0.93895 | 0.93995 | 0.1 | 10.97 505s Other | | 0.1567 | | | 1.83 505s 505s Nlocal: 500 ave 509 max 491 min 505s Histogram: 1 0 0 0 0 0 0 0 0 1 505s Nghost: 1346.5 ave 1369 max 1324 min 505s Histogram: 1 0 0 0 0 0 0 0 0 1 505s Neighs: 10311.5 ave 10391 max 10232 min 505s Histogram: 1 0 0 0 0 0 0 0 0 1 506s 506s Total # of neighbors = 20623 506s Ave neighs/atom = 20.623 506s Neighbor list builds = 205 506s Dangerous builds = 0 506s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 506s using 1 OpenMP thread(s) per MPI task 506s Reading restart file ... 506s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 506s restoring atom style atomic from restart 506s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 506s 1 by 1 by 2 MPI processor grid 506s restoring pair style lj/cubic from restart 506s 1000 atoms 506s read_restart CPU = 0.001 seconds 506s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 506s Neighbor list info ... 506s update: every = 1 steps, delay = 0 steps, check = yes 506s max neighbors/atom: 2000, page size: 100000 506s master list distance cutoff = 1.7475372 506s ghost atom cutoff = 1.7475372 506s binsize = 0.87376862, bins = 8 12 12 506s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 506s (1) pair lj/cubic, perpetual 506s attributes: half, newton on 506s pair build: half/bin/atomonly/newton 506s stencil: half/bin/3d 506s bin: standard 506s Setting up Verlet run ... 506s Unit style : lj 506s Current step : 0 506s Time step : 0.001 506s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 506s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 506s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 506s 1000 0.0062790167 0.0094091065 -5.989181 -1670.9917 18.916499 7.5833446 9.2337867 -1.6650119 0.023434204 13.976079 0.92136905 507s 2000 0.0066373266 0.0099460339 -5.4562974 -2537.9609 37.066673 15.536927 8.9495838 -2.5325146 0.10236546 16.325445 1.5455989 508s 3000 0.006890427 0.010325305 -5.3657707 -2643.943 39.911802 16.807453 8.9154493 -2.6385876 0.11827588 16.639682 1.6328058 508s 4000 0.0073314031 0.010986107 -5.3630545 -2655.872 40.003435 16.849611 8.9144058 -2.6505199 0.11864983 16.649819 1.6355581 509s 5000 0.0075004567 0.011239434 -5.3630119 -2664.6029 39.9983 16.845885 8.9144863 -2.6592512 0.11845678 16.649441 1.6353853 510s 6000 0.0078159402 0.011712186 -5.3629866 -2673.5606 39.999501 16.84634 8.9144972 -2.6682093 0.11829898 16.649784 1.6354006 511s 7000 0.0078365866 0.011743125 -5.3625076 -2682.4138 40.001112 16.844623 8.9145083 -2.6770631 0.11814173 16.650214 1.6354243 511s 8000 0.0075482436 0.011311043 -5.3616205 -2690.9824 39.996485 16.835974 8.9145436 -2.6856321 0.11792207 16.649554 1.6352999 512s 9000 0.0083133885 0.012457613 -5.362258 -2700.1342 39.99904 16.841287 8.9145642 -2.6947844 0.11777124 16.650263 1.6353348 513s 10000 0.0086355586 0.012940385 -5.3622381 -2709.0315 39.997759 16.839976 8.9145913 -2.7036822 0.11757678 16.650228 1.6352858 513s Loop time of 7.43246 on 2 procs for 10000 steps with 1000 atoms 513s 513s Performance: 116246.866 tau/day, 1345.450 timesteps/s, 1.345 Matom-step/s 513s 46.4% CPU use with 2 MPI tasks x 1 OpenMP threads 513s 513s MPI task timing breakdown: 513s Section | min time | avg time | max time |%varavg| %total 513s --------------------------------------------------------------- 513s Pair | 2.8061 | 2.8443 | 2.8824 | 2.3 | 38.27 513s Neigh | 0.0057223 | 0.0061172 | 0.0065121 | 0.5 | 0.08 513s Comm | 3.4508 | 3.4826 | 3.5144 | 1.7 | 46.86 513s Output | 0.0011053 | 0.0013278 | 0.0015502 | 0.6 | 0.02 513s Modify | 0.91938 | 0.94414 | 0.96889 | 2.5 | 12.70 513s Other | | 0.154 | | | 2.07 513s 513s Nlocal: 500 ave 508 max 492 min 513s Histogram: 1 0 0 0 0 0 0 0 0 1 513s Nghost: 1214 ave 1222 max 1206 min 513s Histogram: 1 0 0 0 0 0 0 0 0 1 513s Neighs: 10500 ave 10668 max 10332 min 513s Histogram: 1 0 0 0 0 0 0 0 0 1 513s 513s Total # of neighbors = 21000 513s Ave neighs/atom = 21 513s Neighbor list builds = 10 513s Dangerous builds = 0 513s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 513s using 1 OpenMP thread(s) per MPI task 513s Reading restart file ... 513s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 513s restoring atom style atomic from restart 513s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 513s 1 by 1 by 2 MPI processor grid 513s restoring pair style lj/cubic from restart 513s 1000 atoms 513s read_restart CPU = 0.001 seconds 513s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 513s Neighbor list info ... 513s update: every = 1 steps, delay = 0 steps, check = yes 513s max neighbors/atom: 2000, page size: 100000 513s master list distance cutoff = 1.7475372 513s ghost atom cutoff = 1.7475372 513s binsize = 0.87376862, bins = 8 12 12 513s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 513s (1) pair lj/cubic, perpetual 513s attributes: half, newton on 513s pair build: half/bin/atomonly/newton 513s stencil: half/bin/3d 513s bin: standard 513s Setting up Verlet run ... 513s Unit style : lj 513s Current step : 0 513s Time step : 0.001 513s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 513s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 513s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 514s 1000 0.0079519127 0.011915941 -5.50188 -838.80672 35.61641 14.888864 8.9677618 -0.83331675 0.093886135 16.160598 1.5002751 514s 2000 0.019411054 0.029087464 -5.2936665 -1019.5497 41.77353 17.564044 8.8958463 -1.0142851 0.11811209 16.853902 1.687248 515s 3000 0.047492482 0.071167484 -5.3441861 -971.66654 39.02349 16.097707 8.9321705 -0.96639352 0.073376741 16.597136 1.600557 516s 4000 0.12096417 0.18126481 -5.2102393 -1315.5664 40.846153 16.436163 8.9200987 -1.3105374 0.017574117 16.873813 1.6478442 517s 5000 0.1272463 0.19067858 -5.2517864 -1192.2753 39.105833 15.560562 8.9406854 -1.1872142 -0.00025457398 16.689339 1.5950732 517s 6000 0.14515651 0.21751704 -5.1820215 -1372.0064 40.682715 16.119979 8.9220924 -1.3670419 -0.0066818447 16.857436 1.6428451 518s 7000 0.12286771 0.18411727 -5.2596973 -1200.0518 39.255412 15.703071 8.938111 -1.1949762 0.0073588891 16.698492 1.6002966 519s 8000 0.1428801 0.21410583 -5.1748689 -1340.8702 40.704199 16.116121 8.9238602 -1.3359094 -0.0085191302 16.877378 1.6417704 520s 9000 0.12012635 0.18000933 -5.2541332 -1187.2981 39.322347 15.708304 8.9368444 -1.182224 0.0081737382 16.701561 1.6027307 521s 10000 0.1485814 0.22264922 -5.184468 -1359.9408 40.542555 16.055637 8.9246711 -1.3549789 -0.010330357 16.85094 1.6378163 521s Loop time of 7.80902 on 2 procs for 10000 steps with 1000 atoms 521s 521s Performance: 110641.233 tau/day, 1280.570 timesteps/s, 1.281 Matom-step/s 521s 46.1% CPU use with 2 MPI tasks x 1 OpenMP threads 521s 521s MPI task timing breakdown: 521s Section | min time | avg time | max time |%varavg| %total 521s --------------------------------------------------------------- 521s Pair | 2.9143 | 2.9154 | 2.9164 | 0.1 | 37.33 521s Neigh | 0.055096 | 0.055227 | 0.055358 | 0.1 | 0.71 521s Comm | 3.6654 | 3.666 | 3.6667 | 0.0 | 46.95 521s Output | 0.0011262 | 0.0013168 | 0.0015074 | 0.5 | 0.02 521s Modify | 1.0069 | 1.0083 | 1.0097 | 0.1 | 12.91 521s Other | | 0.1628 | | | 2.08 521s 521s Nlocal: 500 ave 510 max 490 min 521s Histogram: 1 0 0 0 0 0 0 0 0 1 521s Nghost: 1216.5 ave 1227 max 1206 min 521s Histogram: 1 0 0 0 0 0 0 0 0 1 521s Neighs: 10311 ave 10520 max 10102 min 521s Histogram: 1 0 0 0 0 0 0 0 0 1 521s 521s Total # of neighbors = 20622 521s Ave neighs/atom = 20.622 521s Neighbor list builds = 95 521s Dangerous builds = 0 521s Total wall time: 0:00:23 521s LAMMPS (7 Feb 2024 - Update 1) 521s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 521s using 1 OpenMP thread(s) per MPI task 521s Lattice spacing in x,y,z = 1.4142135 2 2 521s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 521s 1 by 1 by 1 MPI processor grid 521s Created 1000 atoms 521s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 521s create_atoms CPU = 0.001 seconds 521s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 521s Neighbor list info ... 521s update: every = 1 steps, delay = 0 steps, check = yes 521s max neighbors/atom: 2000, page size: 100000 521s master list distance cutoff = 1.8475372 521s ghost atom cutoff = 1.8475372 521s binsize = 0.92376862, bins = 8 11 11 521s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 521s (1) pair lj/cubic, perpetual 521s attributes: half, newton on 521s pair build: half/bin/atomonly/newton 521s stencil: half/bin/3d 521s bin: standard 521s Setting up cg style minimization ... 521s Unit style : lj 521s Current step : 0 521s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 521s (src/min.cpp:219) 521s Per MPI rank memory allocation (min/avg/max) = 4.247 | 4.247 | 4.247 Mbytes 521s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 521s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 521s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 521s 134 0 -6.3344253 -6.3344253 -4.3566216e-13 -4.7438184e-13 -4.6860149e-13 6.9780267 9.8684199 9.8684199 521s Loop time of 0.0938222 on 1 procs for 134 steps with 1000 atoms 521s 521s 92.6% CPU use with 1 MPI tasks x 1 OpenMP threads 521s 521s Minimization stats: 521s Stopping criterion = force tolerance 521s Energy initial, next-to-last, final = 521s -6.29375358358556 -6.33442531515503 -6.33442531515503 521s Force two-norm initial, final = 3395.2895 5.6047601e-10 521s Force max component initial, final = 1960.2713 3.2666928e-10 521s Final line search alpha, max atom move = 1 3.2666928e-10 521s Iterations, force evaluations = 134 137 521s 521s MPI task timing breakdown: 521s Section | min time | avg time | max time |%varavg| %total 521s --------------------------------------------------------------- 521s Pair | 0.077141 | 0.077141 | 0.077141 | 0.0 | 82.22 521s Neigh | 0.0012063 | 0.0012063 | 0.0012063 | 0.0 | 1.29 521s Comm | 0.0012927 | 0.0012927 | 0.0012927 | 0.0 | 1.38 521s Output | 2.346e-05 | 2.346e-05 | 2.346e-05 | 0.0 | 0.03 521s Modify | 0 | 0 | 0 | 0.0 | 0.00 521s Other | | 0.01416 | | | 15.09 521s 521s Nlocal: 1000 ave 1000 max 1000 min 521s Histogram: 1 0 0 0 0 0 0 0 0 0 521s Nghost: 1724 ave 1724 max 1724 min 521s Histogram: 1 0 0 0 0 0 0 0 0 0 521s Neighs: 21000 ave 21000 max 21000 min 521s Histogram: 1 0 0 0 0 0 0 0 0 0 521s 521s Total # of neighbors = 21000 521s Ave neighs/atom = 21 521s Neighbor list builds = 1 521s Dangerous builds = 0 521s System init for write_restart ... 521s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 521s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 521s using 1 OpenMP thread(s) per MPI task 521s Reading restart file ... 521s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 521s restoring atom style atomic from restart 521s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 521s 1 by 1 by 1 MPI processor grid 521s restoring pair style lj/cubic from restart 521s 1000 atoms 521s read_restart CPU = 0.000 seconds 521s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 521s Neighbor list info ... 521s update: every = 1 steps, delay = 0 steps, check = yes 521s max neighbors/atom: 2000, page size: 100000 521s master list distance cutoff = 1.7475372 521s ghost atom cutoff = 1.7475372 521s binsize = 0.87376862, bins = 8 12 12 521s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 529s (1) pair lj/cubic, perpetual 529s attributes: half, newton on 529s pair build: half/bin/atomonly/newton 529s stencil: half/bin/3d 529s bin: standard 529s Setting up Verlet run ... 529s Unit style : lj 529s Current step : 0 529s Time step : 0.001 529s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 529s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 529s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 529s 1000 0.0093381492 0.013993217 -2.1704431 -4183.8284 129.15284 58.544409 8.3142517 -4.1816719 0.93744212 23.519052 3.7381985 529s 2000 0.24794859 0.37155095 -5.8915826 -528.38691 8.3849811 1.3744297 9.5938806 -0.52286688 -0.24350394 13.910493 0.41033425 529s 3000 0.3892042 0.5832225 -3.7686896 -3442.3257 72.742382 28.486576 8.6238082 -3.4391402 0.0038227739 19.697354 2.5139569 529s 4000 0.67010303 1.0041494 -4.2080956 -2935.8105 35.596234 3.9346859 8.7508489 -2.9326065 -0.58038927 14.529876 1.6677093 529s 5000 0.41845028 0.62704774 -4.8392822 -1894.6664 30.624319 4.6370699 8.7827304 -1.8904542 -0.31998377 13.670423 1.5249748 529s 6000 0.22409652 0.33580864 -3.7653422 -2666.4156 50.804071 7.220865 8.25496 -2.6629861 -0.017448126 14.48017 2.3883779 529s 7000 0.094832865 0.14210705 -4.5432169 -2337.0271 35.853414 3.4750842 8.4475655 -2.332626 -0.052659777 12.95347 1.8841809 529s 8000 0.043338745 0.06494311 -4.6249402 -1687.4892 39.679004 6.7256868 8.4321684 -1.6829292 0.070571417 13.554654 1.9927395 529s 9000 0.018233343 0.027322664 -4.425909 -1916.4941 41.680023 5.9079935 8.3470382 -1.9120955 0.090887676 13.502397 2.1013348 529s 10000 0.0082616415 0.01238007 -4.6221264 -1723.6542 39.842157 6.5678795 8.41093 -1.7190444 0.099616538 13.484322 2.0113699 529s Loop time of 7.76148 on 1 procs for 10000 steps with 1000 atoms 529s 529s Performance: 111319.038 tau/day, 1288.415 timesteps/s, 1.288 Matom-step/s 529s 99.2% CPU use with 1 MPI tasks x 1 OpenMP threads 529s 529s MPI task timing breakdown: 529s Section | min time | avg time | max time |%varavg| %total 529s --------------------------------------------------------------- 529s Pair | 6.6202 | 6.6202 | 6.6202 | 0.0 | 85.30 529s Neigh | 0.21388 | 0.21388 | 0.21388 | 0.0 | 2.76 529s Comm | 0.10469 | 0.10469 | 0.10469 | 0.0 | 1.35 529s Output | 0.00046039 | 0.00046039 | 0.00046039 | 0.0 | 0.01 529s Modify | 0.77558 | 0.77558 | 0.77558 | 0.0 | 9.99 529s Other | | 0.04667 | | | 0.60 529s 529s Nlocal: 1000 ave 1000 max 1000 min 529s Histogram: 1 0 0 0 0 0 0 0 0 0 529s Nghost: 1886 ave 1886 max 1886 min 529s Histogram: 1 0 0 0 0 0 0 0 0 0 529s Neighs: 20874 ave 20874 max 20874 min 529s Histogram: 1 0 0 0 0 0 0 0 0 0 529s 529s Total # of neighbors = 20874 529s Ave neighs/atom = 20.874 529s Neighbor list builds = 188 529s Dangerous builds = 0 529s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 529s using 1 OpenMP thread(s) per MPI task 529s Reading restart file ... 529s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 529s restoring atom style atomic from restart 529s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 529s 1 by 1 by 1 MPI processor grid 529s restoring pair style lj/cubic from restart 529s 1000 atoms 529s read_restart CPU = 0.000 seconds 529s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 529s Neighbor list info ... 535s update: every = 1 steps, delay = 0 steps, check = yes 535s max neighbors/atom: 2000, page size: 100000 535s master list distance cutoff = 1.7475372 535s ghost atom cutoff = 1.7475372 535s binsize = 0.87376862, bins = 8 12 12 535s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 535s (1) pair lj/cubic, perpetual 535s attributes: half, newton on 535s pair build: half/bin/atomonly/newton 535s stencil: half/bin/3d 535s bin: standard 535s Setting up Verlet run ... 535s Unit style : lj 535s Current step : 0 535s Time step : 0.001 535s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 535s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 535s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 535s 1000 0.0062572988 0.0093765623 -5.989087 -1670.9191 18.918118 7.5844401 9.2338165 -1.6649394 0.023419337 13.976997 0.92138738 535s 2000 0.0068451081 0.010257394 -5.456581 -2537.81 37.064253 15.537266 8.9496405 -2.5323637 0.10230605 16.325406 1.5455016 535s 3000 0.0073276099 0.010980423 -5.3663421 -2643.8751 39.907292 16.807489 8.9154852 -2.6385198 0.11818116 16.63905 1.6326832 535s 4000 0.0069296906 0.010384141 -5.36234 -2655.7228 40.010742 16.851482 8.9144328 -2.6503709 0.11868137 16.651571 1.6356847 535s 5000 0.0076142461 0.011409948 -5.3631443 -2664.4499 39.997648 16.846756 8.9145416 -2.6590982 0.1184114 16.649779 1.6353254 535s 6000 0.0077053831 0.011546517 -5.3628538 -2673.2444 39.991598 16.840314 8.9145803 -2.667893 0.11818361 16.648852 1.6351691 535s 7000 0.0077405663 0.011599239 -5.3623531 -2682.1589 40.000448 16.844009 8.9145774 -2.6768081 0.11809899 16.650669 1.6353525 535s 8000 0.0080673569 0.012088934 -5.3623755 -2691.0104 39.995327 16.840134 8.9146099 -2.6856601 0.11787103 16.649882 1.6352204 535s 9000 0.0083223083 0.012470979 -5.3622988 -2699.8929 40.00571 16.847764 8.9146503 -2.6945431 0.11781523 16.652389 1.6353987 535s 10000 0.0091249116 0.01367368 -5.3630138 -2708.966 39.987197 16.837314 8.9146848 -2.7036167 0.11743014 16.648832 1.6349911 535s Loop time of 6.66145 on 1 procs for 10000 steps with 1000 atoms 535s 535s Performance: 129701.491 tau/day, 1501.175 timesteps/s, 1.501 Matom-step/s 535s 98.4% CPU use with 1 MPI tasks x 1 OpenMP threads 535s 535s MPI task timing breakdown: 535s Section | min time | avg time | max time |%varavg| %total 535s --------------------------------------------------------------- 535s Pair | 5.7269 | 5.7269 | 5.7269 | 0.0 | 85.97 535s Neigh | 0.01255 | 0.01255 | 0.01255 | 0.0 | 0.19 535s Comm | 0.093144 | 0.093144 | 0.093144 | 0.0 | 1.40 535s Output | 0.00047286 | 0.00047286 | 0.00047286 | 0.0 | 0.01 535s Modify | 0.78357 | 0.78357 | 0.78357 | 0.0 | 11.76 535s Other | | 0.0448 | | | 0.67 535s 535s Nlocal: 1000 ave 1000 max 1000 min 535s Histogram: 1 0 0 0 0 0 0 0 0 0 535s Nghost: 1724 ave 1724 max 1724 min 535s Histogram: 1 0 0 0 0 0 0 0 0 0 535s Neighs: 21000 ave 21000 max 21000 min 535s Histogram: 1 0 0 0 0 0 0 0 0 0 535s 535s Total # of neighbors = 21000 535s Ave neighs/atom = 21 535s Neighbor list builds = 11 535s Dangerous builds = 0 535s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 535s using 1 OpenMP thread(s) per MPI task 535s Reading restart file ... 535s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 535s restoring atom style atomic from restart 542s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 542s 1 by 1 by 1 MPI processor grid 542s restoring pair style lj/cubic from restart 542s 1000 atoms 542s read_restart CPU = 0.001 seconds 542s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 542s Neighbor list info ... 542s update: every = 1 steps, delay = 0 steps, check = yes 542s max neighbors/atom: 2000, page size: 100000 542s master list distance cutoff = 1.7475372 542s ghost atom cutoff = 1.7475372 542s binsize = 0.87376862, bins = 8 12 12 542s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 542s (1) pair lj/cubic, perpetual 542s attributes: half, newton on 542s pair build: half/bin/atomonly/newton 542s stencil: half/bin/3d 542s bin: standard 542s Setting up Verlet run ... 542s Unit style : lj 542s Current step : 0 542s Time step : 0.001 542s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 542s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 542s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 542s 1000 0.0083300318 0.012482553 -5.5023183 -838.99233 35.610078 14.886668 8.9677982 -0.83350249 0.093761717 16.159482 1.500112 542s 2000 0.020386436 0.030549075 -5.294934 -1021.4347 41.760404 17.563313 8.8960328 -1.0161703 0.1178086 16.852842 1.6868239 542s 3000 0.049693082 0.074465084 -5.3469418 -982.1922 39.030412 16.123502 8.9325589 -0.97691972 0.073097533 16.601991 1.6003728 542s 4000 0.11859524 0.17771497 -5.207074 -1299.948 40.941639 16.507821 8.9213137 -1.2949186 0.018189971 16.904165 1.6487306 542s 5000 0.130146 0.19502378 -5.261025 -1208.3405 39.059595 15.609328 8.9431689 -1.2032745 -0.00023811036 16.701434 1.5920334 542s 6000 0.13812959 0.20698719 -5.1710048 -1334.1421 40.904888 16.242199 8.9222846 -1.329178 -0.0044756362 16.90509 1.6471606 542s 7000 0.12107441 0.18143001 -5.2602562 -1170.0585 39.060849 15.577606 8.9397535 -1.1649797 0.005587398 16.671517 1.5949415 542s 8000 0.14333426 0.21478639 -5.1717109 -1352.635 40.876285 16.205871 8.9218128 -1.3476781 -0.0069373292 16.895041 1.6469877 542s 9000 0.12159783 0.18221435 -5.2591928 -1186.8604 39.22852 15.6778 8.9376658 -1.1817834 0.0077335044 16.68885 1.6001243 542s 10000 0.15321647 0.22959488 -5.188176 -1391.2245 40.666599 16.146259 8.9228489 -1.3862659 -0.0091900905 16.860718 1.6418747 542s Loop time of 6.78189 on 1 procs for 10000 steps with 1000 atoms 542s 542s Performance: 127398.132 tau/day, 1474.515 timesteps/s, 1.475 Matom-step/s 542s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads 542s 542s MPI task timing breakdown: 542s Section | min time | avg time | max time |%varavg| %total 542s --------------------------------------------------------------- 542s Pair | 5.7522 | 5.7522 | 5.7522 | 0.0 | 84.82 542s Neigh | 0.10745 | 0.10745 | 0.10745 | 0.0 | 1.58 542s Comm | 0.095071 | 0.095071 | 0.095071 | 0.0 | 1.40 542s Output | 0.00047271 | 0.00047271 | 0.00047271 | 0.0 | 0.01 542s Modify | 0.7813 | 0.7813 | 0.7813 | 0.0 | 11.52 542s Other | | 0.04538 | | | 0.67 542s 542s Nlocal: 1000 ave 1000 max 1000 min 542s Histogram: 1 0 0 0 0 0 0 0 0 0 542s Nghost: 1724 ave 1724 max 1724 min 542s Histogram: 1 0 0 0 0 0 0 0 0 0 542s Neighs: 20654 ave 20654 max 20654 min 542s Histogram: 1 0 0 0 0 0 0 0 0 0 542s 542s Total # of neighbors = 20654 542s Ave neighs/atom = 20.654 542s Neighbor list builds = 94 542s Dangerous builds = 0 542s Total wall time: 0:00:21 542s run: OK 543s autopkgtest [17:22:51]: test hugo: -----------------------] 543s autopkgtest [17:22:51]: test hugo: - - - - - - - - - - results - - - - - - - - - - 543s hugo PASS 543s autopkgtest [17:22:51]: test command1: preparing testbed 747s autopkgtest [17:26:15]: testbed dpkg architecture: s390x 747s autopkgtest [17:26:15]: testbed apt version: 2.7.12 747s autopkgtest [17:26:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 747s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 748s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [473 kB] 748s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 748s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 748s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3670 kB] 748s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [632 kB] 748s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 748s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 748s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 748s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3740 kB] 748s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 748s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [33.5 kB] 748s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 750s Fetched 8736 kB in 2s (3843 kB/s) 751s Reading package lists... 753s Reading package lists... 753s Building dependency tree... 753s Reading state information... 753s Calculating upgrade... 753s The following packages will be REMOVED: 753s libreadline8 libssl3 753s The following NEW packages will be installed: 753s libreadline8t64 libssl3t64 753s The following packages have been kept back: 753s curl libpython3.12-minimal libpython3.12-stdlib python3.12 753s python3.12-minimal 753s The following packages will be upgraded: 753s openssl readline-common ubuntu-minimal ubuntu-standard 753s 4 upgraded, 2 newly installed, 2 to remove and 5 not upgraded. 753s Need to get 2906 kB of archives. 753s After this operation, 42.0 kB of additional disk space will be used. 753s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-3.1 [56.4 kB] 753s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-3.1 [171 kB] 754s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu1 [1006 kB] 754s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu1 [1652 kB] 754s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536 [10.7 kB] 754s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536 [10.7 kB] 754s Fetched 2906 kB in 1s (4231 kB/s) 754s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 754s Preparing to unpack .../readline-common_8.2-3.1_all.deb ... 754s Unpacking readline-common (8.2-3.1) over (8.2-3) ... 754s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested: 754s parted depends on libreadline8 (>= 6.0). 754s libpython3.12-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 754s libpython3.11-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 754s gpgsm depends on libreadline8 (>= 6.0). 754s gpgconf depends on libreadline8 (>= 6.0). 754s gpg depends on libreadline8 (>= 6.0). 754s gawk depends on libreadline8 (>= 6.0). 754s fdisk depends on libreadline8 (>= 6.0). 754s 754s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 754s Removing libreadline8:s390x (8.2-3) ... 754s Selecting previously unselected package libreadline8t64:s390x. 754s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52159 files and directories currently installed.) 754s Preparing to unpack .../libreadline8t64_8.2-3.1_s390x.deb ... 754s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 754s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 754s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 754s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 754s Unpacking libreadline8t64:s390x (8.2-3.1) ... 754s Preparing to unpack .../openssl_3.0.13-0ubuntu1_s390x.deb ... 754s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 754s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 754s wget depends on libssl3 (>= 3.0.0). 754s tnftp depends on libssl3 (>= 3.0.0). 754s tcpdump depends on libssl3 (>= 3.0.0). 754s systemd-resolved depends on libssl3 (>= 3.0.0). 754s systemd depends on libssl3 (>= 3.0.0). 754s sudo depends on libssl3 (>= 3.0.0). 754s s390-tools depends on libssl3 (>= 3.0.0). 754s rsync depends on libssl3 (>= 3.0.0). 754s python3-cryptography depends on libssl3 (>= 3.0.0). 754s openssh-server depends on libssl3 (>= 3.0.10). 754s openssh-client depends on libssl3 (>= 3.0.10). 754s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 754s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 754s libssh-4:s390x depends on libssl3 (>= 3.0.0). 754s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 754s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 754s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 754s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 754s libnvme1 depends on libssl3 (>= 3.0.0). 754s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 754s libkmod2:s390x depends on libssl3 (>= 3.0.0). 754s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 754s libcurl4:s390x depends on libssl3 (>= 3.0.0). 754s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 754s kmod depends on libssl3 (>= 3.0.0). 754s dhcpcd-base depends on libssl3 (>= 3.0.0). 754s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 754s 754s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52179 files and directories currently installed.) 754s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 754s Selecting previously unselected package libssl3t64:s390x. 754s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 754s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_s390x.deb ... 754s Unpacking libssl3t64:s390x (3.0.13-0ubuntu1) ... 754s Preparing to unpack .../ubuntu-minimal_1.536_s390x.deb ... 754s Unpacking ubuntu-minimal (1.536) over (1.535) ... 754s Preparing to unpack .../ubuntu-standard_1.536_s390x.deb ... 754s Unpacking ubuntu-standard (1.536) over (1.535) ... 754s Setting up ubuntu-minimal (1.536) ... 754s Setting up libssl3t64:s390x (3.0.13-0ubuntu1) ... 754s Setting up ubuntu-standard (1.536) ... 754s Setting up openssl (3.0.13-0ubuntu1) ... 754s Setting up readline-common (8.2-3.1) ... 754s Setting up libreadline8t64:s390x (8.2-3.1) ... 754s Processing triggers for libc-bin (2.39-0ubuntu2) ... 755s Processing triggers for man-db (2.12.0-3) ... 755s Processing triggers for install-info (7.1-3) ... 755s Reading package lists... 755s Building dependency tree... 755s Reading state information... 756s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 756s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 756s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 756s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 756s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 757s Reading package lists... 757s Reading package lists... 758s Building dependency tree... 758s Reading state information... 758s Calculating upgrade... 758s The following packages have been kept back: 758s curl libpython3.12-minimal libpython3.12-stdlib python3.12 758s python3.12-minimal 758s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 758s Reading package lists... 758s Building dependency tree... 758s Reading state information... 758s 0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded. 762s Reading package lists... 762s Building dependency tree... 762s Reading state information... 762s Starting pkgProblemResolver with broken count: 0 762s Starting 2 pkgProblemResolver with broken count: 0 762s Done 762s The following additional packages will be installed: 762s autoconf automake autotools-dev cpp-12 curl fontconfig-config 762s fonts-dejavu-core fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 libaec0 762s libasan8 libatomic1 libblas3 libc-dev-bin libc6-dev libcairo2 libcc1-0 762s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 762s libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 762s libevent-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 762s libevent-pthreads-2.1-7 libfabric1 libfftw3-double3 libfontconfig1 762s libfreetype6 libgcc-12-dev libgfortran-12-dev libgfortran5 libgl1 762s libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 libglvnd0 libglx-mesa0 762s libglx0 libgnutls30t64 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 762s libhogweed6t64 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev 762s libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 762s libjs-jquery-ui libjsoncpp25 libkim-api2 liblammps-dev liblammps0t64 762s liblapack3 libllvm17 libltdl-dev libltdl7 libmpc3 libmunge2 libnetcdf19t64 762s libnettle8t64 libnl-3-dev libnl-route-3-dev libnsl-dev libnuma-dev libogg0 762s libopengl0 libopenmpi-dev libopenmpi3t64 libpciaccess0 libpixman-1-0 762s libpmix-dev libpmix2t64 libpnetcdf0d libpng16-16t64 libproj25 libpsl5t64 762s libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 librdmacm1 762s libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 762s libtheora0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libvoro++1 libvtk9.1t64 762s libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 762s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 762s libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 libxrender1 libxshmfence1 762s libxss1 libxxf86vm1 linux-libc-dev m4 mpi-default-bin mpi-default-dev 762s ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data python3-lammps 762s python3.12 python3.12-minimal rpcsvc-proto x11-common zlib1g-dev 762s Suggested packages: 762s autoconf-archive gnu-standards autoconf-doc libtool gettext gcc-12-locales 762s cpp-12-doc gcc-12-multilib gcc-12-doc gfortran-12-multilib gfortran-12-doc 762s libcoarrays-dev glibc-doc manpages-dev libfftw3-bin libfftw3-dev glew-utils 762s gnutls-bin libjs-jquery-ui-docs libtool-doc openmpi-doc proj-bin tcl8.6 762s tk8.6 vtk9-doc vtk9-examples m4-doc opencl-icd gfortran | fortran-compiler 762s python3.12-venv python3.12-doc binfmt-support 762s Recommended packages: 762s manpages manpages-dev libc-devtools libgl1-amber-dri javascript-common 762s lammps-doc libtool libcoarrays-openmpi-dev mesa-vulkan-drivers | vulkan-icd 762s python3-mpi4py 762s The following packages will be REMOVED: 762s libcurl3-gnutls libcurl4 libdb5.3 libgnutls30 libhogweed6 libnettle8 762s libpng16-16 libpsl5 762s The following NEW packages will be installed: 762s autoconf automake autopkgtest-satdep autotools-dev cpp-12 fontconfig-config 762s fonts-dejavu-core fonts-dejavu-mono gcc-12 gcc-12-base gfortran-12 libaec0 762s libasan8 libatomic1 libblas3 libc-dev-bin libc6-dev libcairo2 libcc1-0 762s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 762s libdouble-conversion3 libdrm-amdgpu1 libdrm-nouveau2 libdrm-radeon1 762s libevent-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 762s libevent-pthreads-2.1-7 libfabric1 libfftw3-double3 libfontconfig1 762s libfreetype6 libgcc-12-dev libgfortran-12-dev libgfortran5 libgl1 762s libgl1-mesa-dri libgl2ps1.4 libglapi-mesa libglew2.2 libglvnd0 libglx-mesa0 762s libglx0 libgnutls30t64 libgomp1 libhdf5-103-1t64 libhdf5-hl-100t64 762s libhogweed6t64 libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev 762s libisl23 libitm1 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 762s libjs-jquery-ui libjsoncpp25 libkim-api2 liblammps-dev liblammps0t64 762s liblapack3 libllvm17 libltdl-dev libltdl7 libmpc3 libmunge2 libnetcdf19t64 762s libnettle8t64 libnl-3-dev libnl-route-3-dev libnsl-dev libnuma-dev libogg0 762s libopengl0 libopenmpi-dev libopenmpi3t64 libpciaccess0 libpixman-1-0 762s libpmix-dev libpmix2t64 libpnetcdf0d libpng16-16t64 libproj25 libpsl5t64 762s libpython3.12t64 librdmacm1 libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 762s libtbbmalloc2 libtcl8.6 libtheora0 libtiff6 libtirpc-dev libtk8.6 libubsan1 762s libvoro++1 libvtk9.1t64 libvulkan1 libwebp7 libx11-xcb1 libxcb-dri2-0 762s libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 762s libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxfixes3 libxft2 libxnvctrl0 762s libxrender1 libxshmfence1 libxss1 libxxf86vm1 linux-libc-dev m4 762s mpi-default-bin mpi-default-dev ocl-icd-libopencl1 openmpi-bin 762s openmpi-common proj-data python3-lammps rpcsvc-proto x11-common zlib1g-dev 762s The following packages will be upgraded: 762s curl libpython3.12-minimal libpython3.12-stdlib python3.12 762s python3.12-minimal 762s 5 upgraded, 138 newly installed, 8 to remove and 0 not upgraded. 762s Need to get 162 MB/162 MB of archives. 762s After this operation, 622 MB of additional disk space will be used. 762s Get:1 /tmp/autopkgtest.ikRYZd/7-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [712 B] 763s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB] 763s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB] 763s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB] 763s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu7 [227 kB] 763s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu7 [364 kB] 763s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 763s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu7 [356 kB] 763s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build2 [645 kB] 763s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build2 [2437 kB] 763s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build2 [829 kB] 763s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build2 [2046 kB] 763s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-5build1 [763 kB] 764s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB] 764s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x m4 s390x 1.4.19-4 [255 kB] 764s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x autoconf all 2.71-3 [339 kB] 764s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x autotools-dev all 20220109.1 [44.9 kB] 764s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x automake all 1:1.16.5-1.3ubuntu1 [558 kB] 764s Get:19 http://ftpmaster.internal/ubuntu noble/universe s390x gcc-12-base s390x 12.3.0-15ubuntu1 [45.5 kB] 764s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x libisl23 s390x 0.26-3 [722 kB] 764s Get:21 http://ftpmaster.internal/ubuntu noble/main s390x libmpc3 s390x 1.3.1-1 [54.9 kB] 764s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x cpp-12 s390x 12.3.0-15ubuntu1 [8176 kB] 764s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 764s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 764s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x fontconfig-config s390x 2.15.0-1ubuntu1 [37.0 kB] 764s Get:26 http://ftpmaster.internal/ubuntu noble/main s390x libcc1-0 s390x 14-20240303-1ubuntu1 [49.9 kB] 764s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240303-1ubuntu1 [151 kB] 764s Get:28 http://ftpmaster.internal/ubuntu noble/main s390x libitm1 s390x 14-20240303-1ubuntu1 [31.1 kB] 764s Get:29 http://ftpmaster.internal/ubuntu noble/main s390x libatomic1 s390x 14-20240303-1ubuntu1 [9392 B] 764s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x libasan8 s390x 14-20240303-1ubuntu1 [2998 kB] 764s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x libubsan1 s390x 14-20240303-1ubuntu1 [1186 kB] 764s Get:32 http://ftpmaster.internal/ubuntu noble/universe s390x libgcc-12-dev s390x 12.3.0-15ubuntu1 [857 kB] 764s Get:33 http://ftpmaster.internal/ubuntu noble/universe s390x gcc-12 s390x 12.3.0-15ubuntu1 [16.2 MB] 765s Get:34 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240303-1ubuntu1 [598 kB] 765s Get:35 http://ftpmaster.internal/ubuntu noble/universe s390x libgfortran-12-dev s390x 12.3.0-15ubuntu1 [517 kB] 765s Get:36 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu2 [20.2 kB] 765s Get:37 http://ftpmaster.internal/ubuntu noble/main s390x linux-libc-dev s390x 6.8.0-11.11 [1590 kB] 765s Get:38 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 765s Get:39 http://ftpmaster.internal/ubuntu noble/main s390x libtirpc-dev s390x 1.3.4+ds-1build1 [225 kB] 765s Get:40 http://ftpmaster.internal/ubuntu noble/main s390x libnsl-dev s390x 1.3.0-3 [73.5 kB] 765s Get:41 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 765s Get:42 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu2 [1629 kB] 765s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x gfortran-12 s390x 12.3.0-15ubuntu1 [8590 kB] 765s Get:44 http://ftpmaster.internal/ubuntu noble/universe s390x libaec0 s390x 1.1.2-1 [25.7 kB] 765s Get:45 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3 [245 kB] 765s Get:46 http://ftpmaster.internal/ubuntu noble/main s390x libfreetype6 s390x 2.13.2+dfsg-1 [431 kB] 765s Get:47 http://ftpmaster.internal/ubuntu noble/main s390x libfontconfig1 s390x 2.15.0-1ubuntu1 [150 kB] 765s Get:48 http://ftpmaster.internal/ubuntu noble/main s390x libpixman-1-0 s390x 0.42.2-1 [173 kB] 765s Get:49 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-render0 s390x 1.15-1 [17.0 kB] 765s Get:50 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-shm0 s390x 1.15-1 [5782 B] 765s Get:51 http://ftpmaster.internal/ubuntu noble/main s390x libxrender1 s390x 1:0.9.10-1.1 [19.4 kB] 765s Get:52 http://ftpmaster.internal/ubuntu noble/main s390x libcairo2 s390x 1.18.0-1 [578 kB] 765s Get:53 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 765s Get:54 http://ftpmaster.internal/ubuntu noble/universe s390x libdouble-conversion3 s390x 3.3.0-1 [39.6 kB] 765s Get:55 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-amdgpu1 s390x 2.4.120-2 [21.1 kB] 765s Get:56 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-nouveau2 s390x 2.4.120-2 [18.5 kB] 765s Get:57 http://ftpmaster.internal/ubuntu noble/main s390x libdrm-radeon1 s390x 2.4.120-2 [22.7 kB] 765s Get:58 http://ftpmaster.internal/ubuntu noble/main s390x libevent-2.1-7 s390x 2.1.12-stable-9 [144 kB] 765s Get:59 http://ftpmaster.internal/ubuntu noble/main s390x libevent-extra-2.1-7 s390x 2.1.12-stable-9 [63.6 kB] 765s Get:60 http://ftpmaster.internal/ubuntu noble/main s390x libevent-pthreads-2.1-7 s390x 2.1.12-stable-9 [7692 B] 765s Get:61 http://ftpmaster.internal/ubuntu noble/main s390x libevent-openssl-2.1-7 s390x 2.1.12-stable-9 [15.0 kB] 765s Get:62 http://ftpmaster.internal/ubuntu noble/main s390x libevent-dev s390x 2.1.12-stable-9 [275 kB] 765s Get:63 http://ftpmaster.internal/ubuntu noble/main s390x librdmacm1 s390x 50.0-1 [73.9 kB] 765s Get:64 http://ftpmaster.internal/ubuntu noble/universe s390x libfabric1 s390x 1.17.0-3 [513 kB] 765s Get:65 http://ftpmaster.internal/ubuntu noble/main s390x libfftw3-double3 s390x 3.3.10-1ubuntu1 [465 kB] 765s Get:66 http://ftpmaster.internal/ubuntu noble/main s390x libvulkan1 s390x 1.3.275.0-1 [155 kB] 765s Get:67 http://ftpmaster.internal/ubuntu noble/main s390x libglapi-mesa s390x 24.0.1-1ubuntu1 [68.7 kB] 765s Get:68 http://ftpmaster.internal/ubuntu noble/main s390x libllvm17 s390x 1:17.0.6-5build1 [31.2 MB] 766s Get:69 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri3-0 s390x 1.15-1 [7270 B] 766s Get:70 http://ftpmaster.internal/ubuntu noble/main s390x libgl1-mesa-dri s390x 24.0.1-1ubuntu1 [7184 kB] 766s Get:71 http://ftpmaster.internal/ubuntu noble/main s390x libglvnd0 s390x 1.7.0-1 [106 kB] 766s Get:72 http://ftpmaster.internal/ubuntu noble/main s390x libx11-xcb1 s390x 2:1.8.7-1 [7778 B] 766s Get:73 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-dri2-0 s390x 1.15-1 [7426 B] 766s Get:74 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-glx0 s390x 1.15-1 [25.8 kB] 766s Get:75 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-present0 s390x 1.15-1 [5752 B] 766s Get:76 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-randr0 s390x 1.15-1 [19.0 kB] 766s Get:77 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-sync1 s390x 1.15-1 [9392 B] 766s Get:78 http://ftpmaster.internal/ubuntu noble/main s390x libxcb-xfixes0 s390x 1.15-1 [10.5 kB] 766s Get:79 http://ftpmaster.internal/ubuntu noble/main s390x libxfixes3 s390x 1:6.0.0-2 [10.6 kB] 766s Get:80 http://ftpmaster.internal/ubuntu noble/main s390x libxshmfence1 s390x 1.3-1build4 [5334 B] 766s Get:81 http://ftpmaster.internal/ubuntu noble/main s390x libxxf86vm1 s390x 1:1.1.4-1build3 [9900 B] 766s Get:82 http://ftpmaster.internal/ubuntu noble/main s390x libglx-mesa0 s390x 24.0.1-1ubuntu1 [182 kB] 766s Get:83 http://ftpmaster.internal/ubuntu noble/main s390x libglx0 s390x 1.7.0-1 [31.4 kB] 766s Get:84 http://ftpmaster.internal/ubuntu noble/main s390x libgl1 s390x 1.7.0-1 [137 kB] 766s Get:85 http://ftpmaster.internal/ubuntu noble/universe s390x libgl2ps1.4 s390x 1.4.2+dfsg1-2 [40.2 kB] 766s Get:86 http://ftpmaster.internal/ubuntu noble/universe s390x libglew2.2 s390x 2.2.0-4 [202 kB] 766s Get:87 http://ftpmaster.internal/ubuntu noble/universe s390x libsz2 s390x 1.1.2-1 [5346 B] 766s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-103-1t64 s390x 1.10.10+repack-3.1ubuntu3 [1436 kB] 766s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libhdf5-hl-100t64 s390x 1.10.10+repack-3.1ubuntu3 [58.2 kB] 766s Get:90 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc15 s390x 2.10.0-1 [174 kB] 766s Get:91 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 766s Get:92 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 766s Get:93 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 766s Get:94 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 766s Get:95 http://ftpmaster.internal/ubuntu noble/main s390x libjsoncpp25 s390x 1.9.5-6 [75.5 kB] 766s Get:96 http://ftpmaster.internal/ubuntu noble/universe s390x libkim-api2 s390x 2.3.0-1 [544 kB] 766s Get:97 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3 [2979 kB] 767s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libnetcdf19t64 s390x 1:4.9.2-5ubuntu3 [506 kB] 767s Get:99 http://ftpmaster.internal/ubuntu noble/universe s390x libmunge2 s390x 0.5.15-3ubuntu1 [17.3 kB] 767s Get:100 http://ftpmaster.internal/ubuntu noble/main s390x libpciaccess0 s390x 0.17-3 [18.5 kB] 767s Get:101 http://ftpmaster.internal/ubuntu noble/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu1 [11.7 kB] 767s Get:102 http://ftpmaster.internal/ubuntu noble/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1 [39.1 kB] 767s Get:103 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc-plugins s390x 2.10.0-1 [16.1 kB] 767s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libpmix2t64 s390x 5.0.1-4.1 [727 kB] 767s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libopenmpi3t64 s390x 4.1.6-6ubuntu1 [2437 kB] 767s Get:106 http://ftpmaster.internal/ubuntu noble/universe s390x libpnetcdf0d s390x 1.12.3-2 [820 kB] 767s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12t64 s390x 3.12.2-4build2 [2529 kB] 767s Get:108 http://ftpmaster.internal/ubuntu noble/universe s390x libvoro++1 s390x 0.5+revert-to-0.4.6+dfsg1-1 [110 kB] 767s Get:109 http://ftpmaster.internal/ubuntu noble/main s390x libogg0 s390x 1.3.5-3 [22.7 kB] 767s Get:110 http://ftpmaster.internal/ubuntu noble/main s390x libopengl0 s390x 1.7.0-1 [45.9 kB] 767s Get:111 http://ftpmaster.internal/ubuntu noble/universe s390x proj-data all 9.3.1-1 [7867 kB] 768s Get:112 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 768s Get:113 http://ftpmaster.internal/ubuntu noble/main s390x libsharpyuv0 s390x 1.3.2-0.4 [14.8 kB] 768s Get:114 http://ftpmaster.internal/ubuntu noble/main s390x libwebp7 s390x 1.3.2-0.4 [207 kB] 768s Get:115 http://ftpmaster.internal/ubuntu noble/main s390x libtiff6 s390x 4.5.1+git230720-3ubuntu1 [253 kB] 768s Get:116 http://ftpmaster.internal/ubuntu noble/universe s390x libproj25 s390x 9.3.1-1 [1368 kB] 768s Get:117 http://ftpmaster.internal/ubuntu noble/universe s390x libtbbmalloc2 s390x 2021.11.0-2ubuntu2 [68.0 kB] 768s Get:118 http://ftpmaster.internal/ubuntu noble/universe s390x libtbbbind-2-5 s390x 2021.11.0-2ubuntu2 [16.7 kB] 768s Get:119 http://ftpmaster.internal/ubuntu noble/universe s390x libtbb12 s390x 2021.11.0-2ubuntu2 [118 kB] 768s Get:120 http://ftpmaster.internal/ubuntu noble/main s390x libtcl8.6 s390x 8.6.13+dfsg-2 [948 kB] 768s Get:121 http://ftpmaster.internal/ubuntu noble/main s390x libtheora0 s390x 1.1.1+dfsg.1-16.1 [262 kB] 768s Get:122 http://ftpmaster.internal/ubuntu noble/main s390x libxft2 s390x 2.3.6-1 [44.3 kB] 768s Get:123 http://ftpmaster.internal/ubuntu noble/main s390x x11-common all 1:7.7+23ubuntu2 [23.4 kB] 768s Get:124 http://ftpmaster.internal/ubuntu noble/main s390x libxss1 s390x 1:1.2.3-1build2 [8192 B] 768s Get:125 http://ftpmaster.internal/ubuntu noble/main s390x libtk8.6 s390x 8.6.13-2 [757 kB] 768s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libvtk9.1t64 s390x 9.1.0+really9.1.0+dfsg2-7.1build2 [22.1 MB] 769s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x liblammps0t64 s390x 20240207+dfsg-1.1build2 [7961 kB] 769s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-common all 4.1.6-6ubuntu1 [170 kB] 769s Get:129 http://ftpmaster.internal/ubuntu noble/main s390x libnl-3-dev s390x 3.7.0-0.3 [104 kB] 769s Get:130 http://ftpmaster.internal/ubuntu noble/main s390x libnl-route-3-dev s390x 3.7.0-0.3 [218 kB] 769s Get:131 http://ftpmaster.internal/ubuntu noble/main s390x libibverbs-dev s390x 50.0-2 [717 kB] 769s Get:132 http://ftpmaster.internal/ubuntu noble/main s390x libnuma-dev s390x 2.0.18-1 [38.9 kB] 769s Get:133 http://ftpmaster.internal/ubuntu noble/main s390x libltdl7 s390x 2.4.7-7 [41.6 kB] 769s Get:134 http://ftpmaster.internal/ubuntu noble/main s390x libltdl-dev s390x 2.4.7-7 [170 kB] 769s Get:135 http://ftpmaster.internal/ubuntu noble/universe s390x libhwloc-dev s390x 2.10.0-1 [270 kB] 769s Get:136 http://ftpmaster.internal/ubuntu noble/main s390x zlib1g-dev s390x 1:1.3.dfsg-3ubuntu1 [905 kB] 769s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libpmix-dev s390x 5.0.1-4.1 [4040 kB] 770s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x openmpi-bin s390x 4.1.6-6ubuntu1 [84.5 kB] 770s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libopenmpi-dev s390x 4.1.6-6ubuntu1 [825 kB] 770s Get:140 http://ftpmaster.internal/ubuntu noble/universe s390x mpi-default-dev s390x 1.15 [3118 B] 770s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x liblammps-dev s390x 20240207+dfsg-1.1build2 [112 kB] 770s Get:142 http://ftpmaster.internal/ubuntu noble/universe s390x mpi-default-bin s390x 1.15 [2338 B] 770s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-lammps s390x 20240207+dfsg-1.1build2 [70.5 kB] 770s Fetched 162 MB in 7s (22.5 MB/s) 770s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested: 770s librtmp1:s390x depends on libhogweed6. 770s libjcat1:s390x depends on libhogweed6. 770s libgnutls30:s390x depends on libhogweed6 (>= 3.6). 770s 770s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52181 files and directories currently installed.) 770s Removing libhogweed6:s390x (3.9.1-2) ... 770s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested: 770s librtmp1:s390x depends on libnettle8. 770s libgnutls30:s390x depends on libnettle8 (>= 3.9~). 770s libcurl3-gnutls:s390x depends on libnettle8. 770s libarchive13:s390x depends on libnettle8. 770s 770s Removing libnettle8:s390x (3.9.1-2) ... 770s Selecting previously unselected package libnettle8t64:s390x. 770s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 770s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ... 770s Unpacking libnettle8t64:s390x (3.9.1-2.2) ... 770s Selecting previously unselected package libhogweed6t64:s390x. 770s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ... 770s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ... 770s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested: 770s librtmp1:s390x depends on libgnutls30 (>= 3.7.2). 770s libldap2:s390x depends on libgnutls30 (>= 3.8.2). 770s libjcat1:s390x depends on libgnutls30 (>= 3.7.3). 770s libcurl3-gnutls:s390x depends on libgnutls30 (>= 3.8.2). 770s fwupd depends on libgnutls30 (>= 3.7.3). 770s dirmngr depends on libgnutls30 (>= 3.8.1). 770s apt depends on libgnutls30 (>= 3.8.1). 770s 770s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52183 files and directories currently installed.) 770s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ... 770s Selecting previously unselected package libgnutls30t64:s390x. 770s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 770s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ... 770s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 770s Preparing to unpack .../curl_8.5.0-2ubuntu7_s390x.deb ... 770s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 771s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 771s s390-tools depends on libcurl4 (>= 7.16.2). 771s 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 771s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 771s Selecting previously unselected package libcurl4t64:s390x. 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52197 files and directories currently installed.) 771s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu7_s390x.deb ... 771s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu7) ... 771s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 771s wget depends on libpsl5 (>= 0.16.0). 771s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 771s 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52203 files and directories currently installed.) 771s Removing libpsl5:s390x (0.21.2-1build1) ... 771s Selecting previously unselected package libpsl5t64:s390x. 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52198 files and directories currently installed.) 771s Preparing to unpack .../libpsl5t64_0.21.2-1.1_s390x.deb ... 771s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 771s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested: 771s libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0). 771s fwupd depends on libcurl3-gnutls (>= 7.63.0). 771s 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 771s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... 771s Selecting previously unselected package libcurl3t64-gnutls:s390x. 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52197 files and directories currently installed.) 771s Preparing to unpack .../libcurl3t64-gnutls_8.5.0-2ubuntu7_s390x.deb ... 771s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu7) ... 771s Preparing to unpack .../python3.12_3.12.2-4build2_s390x.deb ... 771s Unpacking python3.12 (3.12.2-4build2) over (3.12.2-1) ... 771s Preparing to unpack .../python3.12-minimal_3.12.2-4build2_s390x.deb ... 771s Unpacking python3.12-minimal (3.12.2-4build2) over (3.12.2-1) ... 771s Preparing to unpack .../libpython3.12-minimal_3.12.2-4build2_s390x.deb ... 771s Unpacking libpython3.12-minimal:s390x (3.12.2-4build2) over (3.12.2-1) ... 771s Preparing to unpack .../libpython3.12-stdlib_3.12.2-4build2_s390x.deb ... 771s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build2) over (3.12.2-1) ... 771s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested: 771s libsasl2-modules-db:s390x depends on libdb5.3. 771s libpython3.11-stdlib:s390x depends on libdb5.3. 771s libperl5.38:s390x depends on libdb5.3. 771s libpam-modules:s390x depends on libdb5.3. 771s iproute2 depends on libdb5.3. 771s apt-utils depends on libdb5.3. 771s 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 771s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ... 771s Selecting previously unselected package libdb5.3t64:s390x. 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52196 files and directories currently installed.) 771s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5build1_s390x.deb ... 771s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-5build1) ... 771s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-5build1) ... 771s dpkg: libpng16-16:s390x: dependency problems, but removing anyway as you requested: 771s libplymouth5:s390x depends on libpng16-16 (>= 1.6.2). 771s 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 771s Removing libpng16-16:s390x (1.6.43-1) ... 771s Selecting previously unselected package libpng16-16t64:s390x. 771s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52192 files and directories currently installed.) 771s Preparing to unpack .../000-libpng16-16t64_1.6.43-3_s390x.deb ... 771s Unpacking libpng16-16t64:s390x (1.6.43-3) ... 771s Selecting previously unselected package m4. 771s Preparing to unpack .../001-m4_1.4.19-4_s390x.deb ... 771s Unpacking m4 (1.4.19-4) ... 771s Selecting previously unselected package autoconf. 771s Preparing to unpack .../002-autoconf_2.71-3_all.deb ... 771s Unpacking autoconf (2.71-3) ... 771s Selecting previously unselected package autotools-dev. 771s Preparing to unpack .../003-autotools-dev_20220109.1_all.deb ... 771s Unpacking autotools-dev (20220109.1) ... 771s Selecting previously unselected package automake. 771s Preparing to unpack .../004-automake_1%3a1.16.5-1.3ubuntu1_all.deb ... 771s Unpacking automake (1:1.16.5-1.3ubuntu1) ... 771s Selecting previously unselected package gcc-12-base:s390x. 772s Preparing to unpack .../005-gcc-12-base_12.3.0-15ubuntu1_s390x.deb ... 772s Unpacking gcc-12-base:s390x (12.3.0-15ubuntu1) ... 772s Selecting previously unselected package libisl23:s390x. 772s Preparing to unpack .../006-libisl23_0.26-3_s390x.deb ... 772s Unpacking libisl23:s390x (0.26-3) ... 772s Selecting previously unselected package libmpc3:s390x. 772s Preparing to unpack .../007-libmpc3_1.3.1-1_s390x.deb ... 772s Unpacking libmpc3:s390x (1.3.1-1) ... 772s Selecting previously unselected package cpp-12. 772s Preparing to unpack .../008-cpp-12_12.3.0-15ubuntu1_s390x.deb ... 772s Unpacking cpp-12 (12.3.0-15ubuntu1) ... 772s Selecting previously unselected package fonts-dejavu-mono. 772s Preparing to unpack .../009-fonts-dejavu-mono_2.37-8_all.deb ... 772s Unpacking fonts-dejavu-mono (2.37-8) ... 772s Selecting previously unselected package fonts-dejavu-core. 772s Preparing to unpack .../010-fonts-dejavu-core_2.37-8_all.deb ... 772s Unpacking fonts-dejavu-core (2.37-8) ... 772s Selecting previously unselected package fontconfig-config. 772s Preparing to unpack .../011-fontconfig-config_2.15.0-1ubuntu1_s390x.deb ... 772s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 772s Selecting previously unselected package libcc1-0:s390x. 772s Preparing to unpack .../012-libcc1-0_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libcc1-0:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libgomp1:s390x. 772s Preparing to unpack .../013-libgomp1_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libgomp1:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libitm1:s390x. 772s Preparing to unpack .../014-libitm1_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libitm1:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libatomic1:s390x. 772s Preparing to unpack .../015-libatomic1_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libatomic1:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libasan8:s390x. 772s Preparing to unpack .../016-libasan8_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libasan8:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libubsan1:s390x. 772s Preparing to unpack .../017-libubsan1_14-20240303-1ubuntu1_s390x.deb ... 772s Unpacking libubsan1:s390x (14-20240303-1ubuntu1) ... 772s Selecting previously unselected package libgcc-12-dev:s390x. 772s Preparing to unpack .../018-libgcc-12-dev_12.3.0-15ubuntu1_s390x.deb ... 772s Unpacking libgcc-12-dev:s390x (12.3.0-15ubuntu1) ... 772s Selecting previously unselected package gcc-12. 772s Preparing to unpack .../019-gcc-12_12.3.0-15ubuntu1_s390x.deb ... 772s Unpacking gcc-12 (12.3.0-15ubuntu1) ... 773s Selecting previously unselected package libgfortran5:s390x. 773s Preparing to unpack .../020-libgfortran5_14-20240303-1ubuntu1_s390x.deb ... 773s Unpacking libgfortran5:s390x (14-20240303-1ubuntu1) ... 773s Selecting previously unselected package libgfortran-12-dev:s390x. 773s Preparing to unpack .../021-libgfortran-12-dev_12.3.0-15ubuntu1_s390x.deb ... 773s Unpacking libgfortran-12-dev:s390x (12.3.0-15ubuntu1) ... 773s Selecting previously unselected package libc-dev-bin. 773s Preparing to unpack .../022-libc-dev-bin_2.39-0ubuntu2_s390x.deb ... 773s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 773s Selecting previously unselected package linux-libc-dev:s390x. 773s Preparing to unpack .../023-linux-libc-dev_6.8.0-11.11_s390x.deb ... 773s Unpacking linux-libc-dev:s390x (6.8.0-11.11) ... 773s Selecting previously unselected package libcrypt-dev:s390x. 773s Preparing to unpack .../024-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 773s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 773s Selecting previously unselected package libtirpc-dev:s390x. 773s Preparing to unpack .../025-libtirpc-dev_1.3.4+ds-1build1_s390x.deb ... 773s Unpacking libtirpc-dev:s390x (1.3.4+ds-1build1) ... 773s Selecting previously unselected package libnsl-dev:s390x. 773s Preparing to unpack .../026-libnsl-dev_1.3.0-3_s390x.deb ... 773s Unpacking libnsl-dev:s390x (1.3.0-3) ... 773s Selecting previously unselected package rpcsvc-proto. 773s Preparing to unpack .../027-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 773s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 773s Selecting previously unselected package libc6-dev:s390x. 773s Preparing to unpack .../028-libc6-dev_2.39-0ubuntu2_s390x.deb ... 773s Unpacking libc6-dev:s390x (2.39-0ubuntu2) ... 773s Selecting previously unselected package gfortran-12. 773s Preparing to unpack .../029-gfortran-12_12.3.0-15ubuntu1_s390x.deb ... 773s Unpacking gfortran-12 (12.3.0-15ubuntu1) ... 773s Selecting previously unselected package libaec0:s390x. 773s Preparing to unpack .../030-libaec0_1.1.2-1_s390x.deb ... 773s Unpacking libaec0:s390x (1.1.2-1) ... 773s Selecting previously unselected package libblas3:s390x. 773s Preparing to unpack .../031-libblas3_3.12.0-3_s390x.deb ... 773s Unpacking libblas3:s390x (3.12.0-3) ... 773s Selecting previously unselected package libfreetype6:s390x. 773s Preparing to unpack .../032-libfreetype6_2.13.2+dfsg-1_s390x.deb ... 773s Unpacking libfreetype6:s390x (2.13.2+dfsg-1) ... 773s Selecting previously unselected package libfontconfig1:s390x. 773s Preparing to unpack .../033-libfontconfig1_2.15.0-1ubuntu1_s390x.deb ... 773s Unpacking libfontconfig1:s390x (2.15.0-1ubuntu1) ... 773s Selecting previously unselected package libpixman-1-0:s390x. 773s Preparing to unpack .../034-libpixman-1-0_0.42.2-1_s390x.deb ... 773s Unpacking libpixman-1-0:s390x (0.42.2-1) ... 773s Selecting previously unselected package libxcb-render0:s390x. 773s Preparing to unpack .../035-libxcb-render0_1.15-1_s390x.deb ... 773s Unpacking libxcb-render0:s390x (1.15-1) ... 773s Selecting previously unselected package libxcb-shm0:s390x. 773s Preparing to unpack .../036-libxcb-shm0_1.15-1_s390x.deb ... 773s Unpacking libxcb-shm0:s390x (1.15-1) ... 773s Selecting previously unselected package libxrender1:s390x. 773s Preparing to unpack .../037-libxrender1_1%3a0.9.10-1.1_s390x.deb ... 773s Unpacking libxrender1:s390x (1:0.9.10-1.1) ... 773s Selecting previously unselected package libcairo2:s390x. 773s Preparing to unpack .../038-libcairo2_1.18.0-1_s390x.deb ... 773s Unpacking libcairo2:s390x (1.18.0-1) ... 773s Selecting previously unselected package libdeflate0:s390x. 773s Preparing to unpack .../039-libdeflate0_1.19-1_s390x.deb ... 773s Unpacking libdeflate0:s390x (1.19-1) ... 773s Selecting previously unselected package libdouble-conversion3:s390x. 773s Preparing to unpack .../040-libdouble-conversion3_3.3.0-1_s390x.deb ... 773s Unpacking libdouble-conversion3:s390x (3.3.0-1) ... 773s Selecting previously unselected package libdrm-amdgpu1:s390x. 773s Preparing to unpack .../041-libdrm-amdgpu1_2.4.120-2_s390x.deb ... 773s Unpacking libdrm-amdgpu1:s390x (2.4.120-2) ... 773s Selecting previously unselected package libdrm-nouveau2:s390x. 773s Preparing to unpack .../042-libdrm-nouveau2_2.4.120-2_s390x.deb ... 773s Unpacking libdrm-nouveau2:s390x (2.4.120-2) ... 773s Selecting previously unselected package libdrm-radeon1:s390x. 773s Preparing to unpack .../043-libdrm-radeon1_2.4.120-2_s390x.deb ... 773s Unpacking libdrm-radeon1:s390x (2.4.120-2) ... 773s Selecting previously unselected package libevent-2.1-7:s390x. 773s Preparing to unpack .../044-libevent-2.1-7_2.1.12-stable-9_s390x.deb ... 773s Unpacking libevent-2.1-7:s390x (2.1.12-stable-9) ... 773s Selecting previously unselected package libevent-extra-2.1-7:s390x. 773s Preparing to unpack .../045-libevent-extra-2.1-7_2.1.12-stable-9_s390x.deb ... 773s Unpacking libevent-extra-2.1-7:s390x (2.1.12-stable-9) ... 773s Selecting previously unselected package libevent-pthreads-2.1-7:s390x. 773s Preparing to unpack .../046-libevent-pthreads-2.1-7_2.1.12-stable-9_s390x.deb ... 773s Unpacking libevent-pthreads-2.1-7:s390x (2.1.12-stable-9) ... 773s Selecting previously unselected package libevent-openssl-2.1-7:s390x. 773s Preparing to unpack .../047-libevent-openssl-2.1-7_2.1.12-stable-9_s390x.deb ... 773s Unpacking libevent-openssl-2.1-7:s390x (2.1.12-stable-9) ... 773s Selecting previously unselected package libevent-dev. 773s Preparing to unpack .../048-libevent-dev_2.1.12-stable-9_s390x.deb ... 773s Unpacking libevent-dev (2.1.12-stable-9) ... 773s Selecting previously unselected package librdmacm1:s390x. 773s Preparing to unpack .../049-librdmacm1_50.0-1_s390x.deb ... 773s Unpacking librdmacm1:s390x (50.0-1) ... 773s Selecting previously unselected package libfabric1:s390x. 773s Preparing to unpack .../050-libfabric1_1.17.0-3_s390x.deb ... 773s Unpacking libfabric1:s390x (1.17.0-3) ... 774s Selecting previously unselected package libfftw3-double3:s390x. 774s Preparing to unpack .../051-libfftw3-double3_3.3.10-1ubuntu1_s390x.deb ... 774s Unpacking libfftw3-double3:s390x (3.3.10-1ubuntu1) ... 774s Selecting previously unselected package libvulkan1:s390x. 774s Preparing to unpack .../052-libvulkan1_1.3.275.0-1_s390x.deb ... 774s Unpacking libvulkan1:s390x (1.3.275.0-1) ... 774s Selecting previously unselected package libglapi-mesa:s390x. 774s Preparing to unpack .../053-libglapi-mesa_24.0.1-1ubuntu1_s390x.deb ... 774s Unpacking libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 774s Selecting previously unselected package libllvm17:s390x. 774s Preparing to unpack .../054-libllvm17_1%3a17.0.6-5build1_s390x.deb ... 774s Unpacking libllvm17:s390x (1:17.0.6-5build1) ... 775s Selecting previously unselected package libxcb-dri3-0:s390x. 775s Preparing to unpack .../055-libxcb-dri3-0_1.15-1_s390x.deb ... 775s Unpacking libxcb-dri3-0:s390x (1.15-1) ... 775s Selecting previously unselected package libgl1-mesa-dri:s390x. 775s Preparing to unpack .../056-libgl1-mesa-dri_24.0.1-1ubuntu1_s390x.deb ... 775s Unpacking libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 775s Selecting previously unselected package libglvnd0:s390x. 775s Preparing to unpack .../057-libglvnd0_1.7.0-1_s390x.deb ... 775s Unpacking libglvnd0:s390x (1.7.0-1) ... 775s Selecting previously unselected package libx11-xcb1:s390x. 775s Preparing to unpack .../058-libx11-xcb1_2%3a1.8.7-1_s390x.deb ... 775s Unpacking libx11-xcb1:s390x (2:1.8.7-1) ... 775s Selecting previously unselected package libxcb-dri2-0:s390x. 775s Preparing to unpack .../059-libxcb-dri2-0_1.15-1_s390x.deb ... 775s Unpacking libxcb-dri2-0:s390x (1.15-1) ... 775s Selecting previously unselected package libxcb-glx0:s390x. 775s Preparing to unpack .../060-libxcb-glx0_1.15-1_s390x.deb ... 775s Unpacking libxcb-glx0:s390x (1.15-1) ... 775s Selecting previously unselected package libxcb-present0:s390x. 775s Preparing to unpack .../061-libxcb-present0_1.15-1_s390x.deb ... 775s Unpacking libxcb-present0:s390x (1.15-1) ... 775s Selecting previously unselected package libxcb-randr0:s390x. 775s Preparing to unpack .../062-libxcb-randr0_1.15-1_s390x.deb ... 775s Unpacking libxcb-randr0:s390x (1.15-1) ... 775s Selecting previously unselected package libxcb-sync1:s390x. 775s Preparing to unpack .../063-libxcb-sync1_1.15-1_s390x.deb ... 775s Unpacking libxcb-sync1:s390x (1.15-1) ... 775s Selecting previously unselected package libxcb-xfixes0:s390x. 775s Preparing to unpack .../064-libxcb-xfixes0_1.15-1_s390x.deb ... 775s Unpacking libxcb-xfixes0:s390x (1.15-1) ... 775s Selecting previously unselected package libxfixes3:s390x. 775s Preparing to unpack .../065-libxfixes3_1%3a6.0.0-2_s390x.deb ... 775s Unpacking libxfixes3:s390x (1:6.0.0-2) ... 775s Selecting previously unselected package libxshmfence1:s390x. 775s Preparing to unpack .../066-libxshmfence1_1.3-1build4_s390x.deb ... 775s Unpacking libxshmfence1:s390x (1.3-1build4) ... 775s Selecting previously unselected package libxxf86vm1:s390x. 775s Preparing to unpack .../067-libxxf86vm1_1%3a1.1.4-1build3_s390x.deb ... 775s Unpacking libxxf86vm1:s390x (1:1.1.4-1build3) ... 775s Selecting previously unselected package libglx-mesa0:s390x. 775s Preparing to unpack .../068-libglx-mesa0_24.0.1-1ubuntu1_s390x.deb ... 775s Unpacking libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 775s Selecting previously unselected package libglx0:s390x. 775s Preparing to unpack .../069-libglx0_1.7.0-1_s390x.deb ... 775s Unpacking libglx0:s390x (1.7.0-1) ... 775s Selecting previously unselected package libgl1:s390x. 775s Preparing to unpack .../070-libgl1_1.7.0-1_s390x.deb ... 775s Unpacking libgl1:s390x (1.7.0-1) ... 775s Selecting previously unselected package libgl2ps1.4. 775s Preparing to unpack .../071-libgl2ps1.4_1.4.2+dfsg1-2_s390x.deb ... 775s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2) ... 775s Selecting previously unselected package libglew2.2:s390x. 775s Preparing to unpack .../072-libglew2.2_2.2.0-4_s390x.deb ... 775s Unpacking libglew2.2:s390x (2.2.0-4) ... 775s Selecting previously unselected package libsz2:s390x. 775s Preparing to unpack .../073-libsz2_1.1.2-1_s390x.deb ... 775s Unpacking libsz2:s390x (1.1.2-1) ... 775s Selecting previously unselected package libhdf5-103-1t64:s390x. 775s Preparing to unpack .../074-libhdf5-103-1t64_1.10.10+repack-3.1ubuntu3_s390x.deb ... 775s Unpacking libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu3) ... 775s Selecting previously unselected package libhdf5-hl-100t64:s390x. 775s Preparing to unpack .../075-libhdf5-hl-100t64_1.10.10+repack-3.1ubuntu3_s390x.deb ... 775s Unpacking libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu3) ... 775s Selecting previously unselected package libhwloc15:s390x. 775s Preparing to unpack .../076-libhwloc15_2.10.0-1_s390x.deb ... 775s Unpacking libhwloc15:s390x (2.10.0-1) ... 775s Selecting previously unselected package libjpeg-turbo8:s390x. 775s Preparing to unpack .../077-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 775s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 775s Selecting previously unselected package libjpeg8:s390x. 775s Preparing to unpack .../078-libjpeg8_8c-2ubuntu11_s390x.deb ... 775s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 775s Selecting previously unselected package libjs-jquery. 775s Preparing to unpack .../079-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 775s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 775s Selecting previously unselected package libjs-jquery-ui. 775s Preparing to unpack .../080-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 775s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 775s Selecting previously unselected package libjsoncpp25:s390x. 775s Preparing to unpack .../081-libjsoncpp25_1.9.5-6_s390x.deb ... 775s Unpacking libjsoncpp25:s390x (1.9.5-6) ... 775s Selecting previously unselected package libkim-api2:s390x. 775s Preparing to unpack .../082-libkim-api2_2.3.0-1_s390x.deb ... 775s Unpacking libkim-api2:s390x (2.3.0-1) ... 775s Selecting previously unselected package liblapack3:s390x. 775s Preparing to unpack .../083-liblapack3_3.12.0-3_s390x.deb ... 775s Unpacking liblapack3:s390x (3.12.0-3) ... 775s Selecting previously unselected package libnetcdf19t64:s390x. 775s Preparing to unpack .../084-libnetcdf19t64_1%3a4.9.2-5ubuntu3_s390x.deb ... 775s Unpacking libnetcdf19t64:s390x (1:4.9.2-5ubuntu3) ... 775s Selecting previously unselected package libmunge2:s390x. 775s Preparing to unpack .../085-libmunge2_0.5.15-3ubuntu1_s390x.deb ... 775s Unpacking libmunge2:s390x (0.5.15-3ubuntu1) ... 775s Selecting previously unselected package libpciaccess0:s390x. 775s Preparing to unpack .../086-libpciaccess0_0.17-3_s390x.deb ... 775s Unpacking libpciaccess0:s390x (0.17-3) ... 775s Selecting previously unselected package libxnvctrl0:s390x. 775s Preparing to unpack .../087-libxnvctrl0_510.47.03-0ubuntu1_s390x.deb ... 775s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu1) ... 775s Selecting previously unselected package ocl-icd-libopencl1:s390x. 775s Preparing to unpack .../088-ocl-icd-libopencl1_2.3.2-1_s390x.deb ... 775s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1) ... 775s Selecting previously unselected package libhwloc-plugins:s390x. 775s Preparing to unpack .../089-libhwloc-plugins_2.10.0-1_s390x.deb ... 775s Unpacking libhwloc-plugins:s390x (2.10.0-1) ... 775s Selecting previously unselected package libpmix2t64:s390x. 775s Preparing to unpack .../090-libpmix2t64_5.0.1-4.1_s390x.deb ... 775s Unpacking libpmix2t64:s390x (5.0.1-4.1) ... 775s Selecting previously unselected package libopenmpi3t64:s390x. 775s Preparing to unpack .../091-libopenmpi3t64_4.1.6-6ubuntu1_s390x.deb ... 775s Unpacking libopenmpi3t64:s390x (4.1.6-6ubuntu1) ... 776s Selecting previously unselected package libpnetcdf0d:s390x. 776s Preparing to unpack .../092-libpnetcdf0d_1.12.3-2_s390x.deb ... 776s Unpacking libpnetcdf0d:s390x (1.12.3-2) ... 776s Selecting previously unselected package libpython3.12t64:s390x. 776s Preparing to unpack .../093-libpython3.12t64_3.12.2-4build2_s390x.deb ... 776s Unpacking libpython3.12t64:s390x (3.12.2-4build2) ... 776s Selecting previously unselected package libvoro++1. 776s Preparing to unpack .../094-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_s390x.deb ... 776s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 776s Selecting previously unselected package libogg0:s390x. 776s Preparing to unpack .../095-libogg0_1.3.5-3_s390x.deb ... 776s Unpacking libogg0:s390x (1.3.5-3) ... 776s Selecting previously unselected package libopengl0:s390x. 776s Preparing to unpack .../096-libopengl0_1.7.0-1_s390x.deb ... 776s Unpacking libopengl0:s390x (1.7.0-1) ... 776s Selecting previously unselected package proj-data. 776s Preparing to unpack .../097-proj-data_9.3.1-1_all.deb ... 776s Unpacking proj-data (9.3.1-1) ... 776s Selecting previously unselected package libjbig0:s390x. 776s Preparing to unpack .../098-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 776s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 776s Selecting previously unselected package libsharpyuv0:s390x. 776s Preparing to unpack .../099-libsharpyuv0_1.3.2-0.4_s390x.deb ... 776s Unpacking libsharpyuv0:s390x (1.3.2-0.4) ... 776s Selecting previously unselected package libwebp7:s390x. 776s Preparing to unpack .../100-libwebp7_1.3.2-0.4_s390x.deb ... 776s Unpacking libwebp7:s390x (1.3.2-0.4) ... 776s Selecting previously unselected package libtiff6:s390x. 776s Preparing to unpack .../101-libtiff6_4.5.1+git230720-3ubuntu1_s390x.deb ... 776s Unpacking libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 776s Selecting previously unselected package libproj25:s390x. 776s Preparing to unpack .../102-libproj25_9.3.1-1_s390x.deb ... 776s Unpacking libproj25:s390x (9.3.1-1) ... 776s Selecting previously unselected package libtbbmalloc2:s390x. 776s Preparing to unpack .../103-libtbbmalloc2_2021.11.0-2ubuntu2_s390x.deb ... 776s Unpacking libtbbmalloc2:s390x (2021.11.0-2ubuntu2) ... 776s Selecting previously unselected package libtbbbind-2-5:s390x. 776s Preparing to unpack .../104-libtbbbind-2-5_2021.11.0-2ubuntu2_s390x.deb ... 776s Unpacking libtbbbind-2-5:s390x (2021.11.0-2ubuntu2) ... 776s Selecting previously unselected package libtbb12:s390x. 776s Preparing to unpack .../105-libtbb12_2021.11.0-2ubuntu2_s390x.deb ... 776s Unpacking libtbb12:s390x (2021.11.0-2ubuntu2) ... 776s Selecting previously unselected package libtcl8.6:s390x. 776s Preparing to unpack .../106-libtcl8.6_8.6.13+dfsg-2_s390x.deb ... 776s Unpacking libtcl8.6:s390x (8.6.13+dfsg-2) ... 776s Selecting previously unselected package libtheora0:s390x. 776s Preparing to unpack .../107-libtheora0_1.1.1+dfsg.1-16.1_s390x.deb ... 776s Unpacking libtheora0:s390x (1.1.1+dfsg.1-16.1) ... 776s Selecting previously unselected package libxft2:s390x. 776s Preparing to unpack .../108-libxft2_2.3.6-1_s390x.deb ... 776s Unpacking libxft2:s390x (2.3.6-1) ... 776s Selecting previously unselected package x11-common. 776s Preparing to unpack .../109-x11-common_1%3a7.7+23ubuntu2_all.deb ... 776s Unpacking x11-common (1:7.7+23ubuntu2) ... 776s Selecting previously unselected package libxss1:s390x. 776s Preparing to unpack .../110-libxss1_1%3a1.2.3-1build2_s390x.deb ... 776s Unpacking libxss1:s390x (1:1.2.3-1build2) ... 776s Selecting previously unselected package libtk8.6:s390x. 776s Preparing to unpack .../111-libtk8.6_8.6.13-2_s390x.deb ... 776s Unpacking libtk8.6:s390x (8.6.13-2) ... 776s Selecting previously unselected package libvtk9.1t64:s390x. 776s Preparing to unpack .../112-libvtk9.1t64_9.1.0+really9.1.0+dfsg2-7.1build2_s390x.deb ... 776s Unpacking libvtk9.1t64:s390x (9.1.0+really9.1.0+dfsg2-7.1build2) ... 777s Selecting previously unselected package liblammps0t64:s390x. 777s Preparing to unpack .../113-liblammps0t64_20240207+dfsg-1.1build2_s390x.deb ... 777s Unpacking liblammps0t64:s390x (20240207+dfsg-1.1build2) ... 777s Selecting previously unselected package openmpi-common. 777s Preparing to unpack .../114-openmpi-common_4.1.6-6ubuntu1_all.deb ... 777s Unpacking openmpi-common (4.1.6-6ubuntu1) ... 777s Selecting previously unselected package libnl-3-dev:s390x. 777s Preparing to unpack .../115-libnl-3-dev_3.7.0-0.3_s390x.deb ... 777s Unpacking libnl-3-dev:s390x (3.7.0-0.3) ... 777s Selecting previously unselected package libnl-route-3-dev:s390x. 777s Preparing to unpack .../116-libnl-route-3-dev_3.7.0-0.3_s390x.deb ... 777s Unpacking libnl-route-3-dev:s390x (3.7.0-0.3) ... 777s Selecting previously unselected package libibverbs-dev:s390x. 777s Preparing to unpack .../117-libibverbs-dev_50.0-2_s390x.deb ... 777s Unpacking libibverbs-dev:s390x (50.0-2) ... 777s Selecting previously unselected package libnuma-dev:s390x. 777s Preparing to unpack .../118-libnuma-dev_2.0.18-1_s390x.deb ... 777s Unpacking libnuma-dev:s390x (2.0.18-1) ... 777s Selecting previously unselected package libltdl7:s390x. 777s Preparing to unpack .../119-libltdl7_2.4.7-7_s390x.deb ... 777s Unpacking libltdl7:s390x (2.4.7-7) ... 777s Selecting previously unselected package libltdl-dev:s390x. 777s Preparing to unpack .../120-libltdl-dev_2.4.7-7_s390x.deb ... 777s Unpacking libltdl-dev:s390x (2.4.7-7) ... 777s Selecting previously unselected package libhwloc-dev:s390x. 777s Preparing to unpack .../121-libhwloc-dev_2.10.0-1_s390x.deb ... 777s Unpacking libhwloc-dev:s390x (2.10.0-1) ... 777s Selecting previously unselected package zlib1g-dev:s390x. 777s Preparing to unpack .../122-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_s390x.deb ... 777s Unpacking zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 777s Selecting previously unselected package libpmix-dev:s390x. 777s Preparing to unpack .../123-libpmix-dev_5.0.1-4.1_s390x.deb ... 777s Unpacking libpmix-dev:s390x (5.0.1-4.1) ... 777s Selecting previously unselected package openmpi-bin. 777s Preparing to unpack .../124-openmpi-bin_4.1.6-6ubuntu1_s390x.deb ... 777s Unpacking openmpi-bin (4.1.6-6ubuntu1) ... 777s Selecting previously unselected package libopenmpi-dev:s390x. 777s Preparing to unpack .../125-libopenmpi-dev_4.1.6-6ubuntu1_s390x.deb ... 777s Unpacking libopenmpi-dev:s390x (4.1.6-6ubuntu1) ... 778s Selecting previously unselected package mpi-default-dev. 778s Preparing to unpack .../126-mpi-default-dev_1.15_s390x.deb ... 778s Unpacking mpi-default-dev (1.15) ... 778s Selecting previously unselected package liblammps-dev. 778s Preparing to unpack .../127-liblammps-dev_20240207+dfsg-1.1build2_s390x.deb ... 778s Unpacking liblammps-dev (20240207+dfsg-1.1build2) ... 778s Selecting previously unselected package mpi-default-bin. 778s Preparing to unpack .../128-mpi-default-bin_1.15_s390x.deb ... 778s Unpacking mpi-default-bin (1.15) ... 778s Selecting previously unselected package python3-lammps. 778s Preparing to unpack .../129-python3-lammps_20240207+dfsg-1.1build2_s390x.deb ... 778s Unpacking python3-lammps (20240207+dfsg-1.1build2) ... 778s Selecting previously unselected package autopkgtest-satdep. 778s Preparing to unpack .../130-7-autopkgtest-satdep.deb ... 778s Unpacking autopkgtest-satdep (0) ... 778s Setting up libxcb-dri3-0:s390x (1.15-1) ... 778s Setting up libtbbmalloc2:s390x (2021.11.0-2ubuntu2) ... 778s Setting up libpixman-1-0:s390x (0.42.2-1) ... 778s Setting up librdmacm1:s390x (50.0-1) ... 778s Setting up libsharpyuv0:s390x (1.3.2-0.4) ... 778s Setting up libx11-xcb1:s390x (2:1.8.7-1) ... 778s Setting up libpciaccess0:s390x (0.17-3) ... 778s Setting up libdouble-conversion3:s390x (3.3.0-1) ... 778s Setting up libevent-extra-2.1-7:s390x (2.1.12-stable-9) ... 778s Setting up libdrm-nouveau2:s390x (2.4.120-2) ... 778s Setting up libxcb-xfixes0:s390x (1.15-1) ... 778s Setting up libogg0:s390x (1.3.5-3) ... 778s Setting up proj-data (9.3.1-1) ... 778s Setting up libxrender1:s390x (1:0.9.10-1.1) ... 778s Setting up libxcb-render0:s390x (1.15-1) ... 778s Setting up libdrm-radeon1:s390x (2.4.120-2) ... 778s Setting up libglvnd0:s390x (1.7.0-1) ... 778s Setting up libxcb-glx0:s390x (1.15-1) ... 778s Setting up libpython3.12-minimal:s390x (3.12.2-4build2) ... 778s Setting up x11-common (1:7.7+23ubuntu2) ... 778s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 778s Setting up libdeflate0:s390x (1.19-1) ... 778s Setting up linux-libc-dev:s390x (6.8.0-11.11) ... 778s Setting up libevent-openssl-2.1-7:s390x (2.1.12-stable-9) ... 778s Setting up m4 (1.4.19-4) ... 778s Setting up libxcb-shm0:s390x (1.15-1) ... 778s Setting up libgomp1:s390x (14-20240303-1ubuntu1) ... 778s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 778s Setting up libaec0:s390x (1.1.2-1) ... 778s Setting up libopengl0:s390x (1.7.0-1) ... 778s Setting up libxxf86vm1:s390x (1:1.1.4-1build3) ... 778s Setting up gcc-12-base:s390x (12.3.0-15ubuntu1) ... 778s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu1) ... 778s Setting up libxcb-present0:s390x (1.15-1) ... 778s Setting up libnettle8t64:s390x (3.9.1-2.2) ... 778s Setting up autotools-dev (20220109.1) ... 778s Setting up libblas3:s390x (3.12.0-3) ... 778s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 778s Setting up libtirpc-dev:s390x (1.3.4+ds-1build1) ... 778s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 778s Setting up libmunge2:s390x (0.5.15-3ubuntu1) ... 778s Setting up libxfixes3:s390x (1:6.0.0-2) ... 778s Setting up libxcb-sync1:s390x (1.15-1) ... 778s Setting up fonts-dejavu-mono (2.37-8) ... 778s Setting up libpng16-16t64:s390x (1.6.43-3) ... 778s Setting up libhwloc15:s390x (2.10.0-1) ... 778s Setting up libmpc3:s390x (1.3.1-1) ... 778s Setting up libatomic1:s390x (14-20240303-1ubuntu1) ... 778s Setting up libevent-2.1-7:s390x (2.1.12-stable-9) ... 778s Setting up libtcl8.6:s390x (8.6.13+dfsg-2) ... 778s Setting up libjsoncpp25:s390x (1.9.5-6) ... 778s Setting up fonts-dejavu-core (2.37-8) ... 778s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 778s Setting up libltdl7:s390x (2.4.7-7) ... 778s Setting up libfftw3-double3:s390x (3.3.10-1ubuntu1) ... 778s Setting up libglapi-mesa:s390x (24.0.1-1ubuntu1) ... 778s Setting up libgfortran5:s390x (14-20240303-1ubuntu1) ... 778s Setting up libvulkan1:s390x (1.3.275.0-1) ... 778s Setting up autoconf (2.71-3) ... 778s Setting up libwebp7:s390x (1.3.2-0.4) ... 778s Setting up libubsan1:s390x (14-20240303-1ubuntu1) ... 778s Setting up libxcb-dri2-0:s390x (1.15-1) ... 778s Setting up libhogweed6t64:s390x (3.9.1-2.2) ... 778s Setting up libnl-3-dev:s390x (3.7.0-0.3) ... 778s Setting up libnsl-dev:s390x (1.3.0-3) ... 778s Setting up ocl-icd-libopencl1:s390x (2.3.2-1) ... 778s Setting up libxshmfence1:s390x (1.3-1build4) ... 778s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 778s Setting up libxcb-randr0:s390x (1.15-1) ... 778s Setting up libasan8:s390x (14-20240303-1ubuntu1) ... 778s Setting up openmpi-common (4.1.6-6ubuntu1) ... 778s Setting up libxss1:s390x (1:1.2.3-1build2) ... 778s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 778s Setting up libisl23:s390x (0.26-3) ... 778s Setting up libc-dev-bin (2.39-0ubuntu2) ... 778s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 778s Setting up libllvm17:s390x (1:17.0.6-5build1) ... 778s Setting up libcc1-0:s390x (14-20240303-1ubuntu1) ... 778s Setting up libsz2:s390x (1.1.2-1) ... 778s Setting up libitm1:s390x (14-20240303-1ubuntu1) ... 778s Setting up libevent-pthreads-2.1-7:s390x (2.1.12-stable-9) ... 778s Setting up libdrm-amdgpu1:s390x (2.4.120-2) ... 778s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 778s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 778s Setting up automake (1:1.16.5-1.3ubuntu1) ... 778s update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode 778s Setting up libfabric1:s390x (1.17.0-3) ... 778s Setting up python3.12-minimal (3.12.2-4build2) ... 779s Setting up liblapack3:s390x (3.12.0-3) ... 779s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 779s Setting up cpp-12 (12.3.0-15ubuntu1) ... 779s Setting up libpython3.12-stdlib:s390x (3.12.2-4build2) ... 779s Setting up libcurl4t64:s390x (8.5.0-2ubuntu7) ... 779s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 779s Setting up python3.12 (3.12.2-4build2) ... 780s Setting up libgl1-mesa-dri:s390x (24.0.1-1ubuntu1) ... 780s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu7) ... 780s Setting up libhwloc-plugins:s390x (2.10.0-1) ... 781s Setting up libtbbbind-2-5:s390x (2021.11.0-2ubuntu2) ... 781s Setting up libpython3.12t64:s390x (3.12.2-4build2) ... 781s Setting up libnl-route-3-dev:s390x (3.7.0-0.3) ... 781s Setting up libltdl-dev:s390x (2.4.7-7) ... 781s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 781s Setting up libfreetype6:s390x (2.13.2+dfsg-1) ... 781s Setting up libgcc-12-dev:s390x (12.3.0-15ubuntu1) ... 781s Setting up libevent-dev (2.1.12-stable-9) ... 781s Setting up libpmix2t64:s390x (5.0.1-4.1) ... 781s Setting up libopenmpi3t64:s390x (4.1.6-6ubuntu1) ... 781s Setting up libtiff6:s390x (4.5.1+git230720-3ubuntu1) ... 781s Setting up libpnetcdf0d:s390x (1.12.3-2) ... 781s Setting up libc6-dev:s390x (2.39-0ubuntu2) ... 781s Setting up curl (8.5.0-2ubuntu7) ... 781s Setting up libfontconfig1:s390x (2.15.0-1ubuntu1) ... 781s Setting up libhdf5-103-1t64:s390x (1.10.10+repack-3.1ubuntu3) ... 781s Setting up openmpi-bin (4.1.6-6ubuntu1) ... 781s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 781s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 781s Setting up libhdf5-hl-100t64:s390x (1.10.10+repack-3.1ubuntu3) ... 781s Setting up libnetcdf19t64:s390x (1:4.9.2-5ubuntu3) ... 781s Setting up libxft2:s390x (2.3.6-1) ... 781s Setting up libglx-mesa0:s390x (24.0.1-1ubuntu1) ... 781s Setting up libglx0:s390x (1.7.0-1) ... 781s Setting up libproj25:s390x (9.3.1-1) ... 781s Setting up libtk8.6:s390x (8.6.13-2) ... 781s Setting up mpi-default-bin (1.15) ... 781s Setting up libgfortran-12-dev:s390x (12.3.0-15ubuntu1) ... 781s Setting up libtbb12:s390x (2021.11.0-2ubuntu2) ... 781s Setting up libibverbs-dev:s390x (50.0-2) ... 781s Setting up libcairo2:s390x (1.18.0-1) ... 781s Setting up libnuma-dev:s390x (2.0.18-1) ... 781s Setting up libgl1:s390x (1.7.0-1) ... 781s Setting up gcc-12 (12.3.0-15ubuntu1) ... 781s Setting up libglew2.2:s390x (2.2.0-4) ... 781s Setting up zlib1g-dev:s390x (1:1.3.dfsg-3ubuntu1) ... 781s Setting up libtheora0:s390x (1.1.1+dfsg.1-16.1) ... 781s Setting up libhwloc-dev:s390x (2.10.0-1) ... 781s Setting up libpmix-dev:s390x (5.0.1-4.1) ... 781s Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... 781s Setting up gfortran-12 (12.3.0-15ubuntu1) ... 781s Setting up libvtk9.1t64:s390x (9.1.0+really9.1.0+dfsg2-7.1build2) ... 781s Setting up libopenmpi-dev:s390x (4.1.6-6ubuntu1) ... 781s update-alternatives: using /usr/lib/s390x-linux-gnu/openmpi/include to provide /usr/include/s390x-linux-gnu/mpi (mpi-s390x-linux-gnu) in auto mode 781s Setting up libkim-api2:s390x (2.3.0-1) ... 781s Setting up liblammps0t64:s390x (20240207+dfsg-1.1build2) ... 781s Setting up mpi-default-dev (1.15) ... 781s Setting up liblammps-dev (20240207+dfsg-1.1build2) ... 781s Setting up python3-lammps (20240207+dfsg-1.1build2) ... 781s Setting up autopkgtest-satdep (0) ... 781s Processing triggers for systemd (255.2-3ubuntu2) ... 781s Processing triggers for man-db (2.12.0-3) ... 781s Processing triggers for install-info (7.1-3) ... 781s Processing triggers for libc-bin (2.39-0ubuntu2) ... 785s (Reading database ... 59253 files and directories currently installed.) 785s Removing autopkgtest-satdep (0) ... 817s autopkgtest [17:27:25]: test command1: cd python/examples; python3 demo.py 817s autopkgtest [17:27:25]: test command1: [----------------------- 817s LAMMPS (7 Feb 2024 - Update 1) 818s 818s Python output: 818s Natoms, mass, x[0][0] coord = 4000 1.0 0.2727243714666721 818s Temperature from compute = 0.750609109548371 818s Energy from equal-style variable = -5.748192616533703 818s Velocity component from atom-style variable = -0.008231833025308041 818s Volume from get_thermo = 4738.213693437576 818s Natoms from get_natoms = 4000 818s Global coords from gather_atoms = 0.2727243714666721 0.1442606170751015 0.02741951954247279 818s Changed x[0][0] via scatter_atoms = 1.272724371466672 818s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 818s using 1 OpenMP thread(s) per MPI task 818s Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 818s Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 818s 1 by 1 by 1 MPI processor grid 818s Created 4000 atoms 818s using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 818s create_atoms CPU = 0.001 seconds 818s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 818s Neighbor list info ... 818s update: every = 20 steps, delay = 0 steps, check = no 818s max neighbors/atom: 2000, page size: 100000 818s master list distance cutoff = 2.8 818s ghost atom cutoff = 2.8 818s binsize = 1.4, bins = 12 12 12 818s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 818s (1) pair lj/cut, perpetual 818s attributes: half, newton on 818s pair build: half/bin/atomonly/newton 818s stencil: half/bin/3d 818s bin: standard 818s Setting up Verlet run ... 818s Unit style : lj 818s Current step : 0 818s Time step : 0.005 818s Per MPI rank memory allocation (min/avg/max) = 3.763 | 3.763 | 3.763 Mbytes 818s Step Temp E_pair E_mol TotEng Press 818s 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 818s 100 0.75060911 -5.7481926 0 -4.6225604 0.24772341 818s Loop time of 0.457033 on 1 procs for 100 steps with 4000 atoms 818s 818s Performance: 94522.695 tau/day, 218.803 timesteps/s, 875.210 katom-step/s 818s 95.3% CPU use with 1 MPI tasks x 1 OpenMP threads 818s 818s MPI task timing breakdown: 818s Section | min time | avg time | max time |%varavg| %total 818s --------------------------------------------------------------- 818s Pair | 0.40553 | 0.40553 | 0.40553 | 0.0 | 88.73 818s Neigh | 0.041232 | 0.041232 | 0.041232 | 0.0 | 9.02 818s Comm | 0.0047433 | 0.0047433 | 0.0047433 | 0.0 | 1.04 818s Output | 2.925e-05 | 2.925e-05 | 2.925e-05 | 0.0 | 0.01 818s Modify | 0.0045859 | 0.0045859 | 0.0045859 | 0.0 | 1.00 818s Other | | 0.0009124 | | | 0.20 818s 818s Nlocal: 4000 ave 4000 max 4000 min 818s Histogram: 1 0 0 0 0 0 0 0 0 0 818s Nghost: 5770 ave 5770 max 5770 min 818s Histogram: 1 0 0 0 0 0 0 0 0 0 818s Neighs: 150293 ave 150293 max 150293 min 818s Histogram: 1 0 0 0 0 0 0 0 0 0 818s 818s Total # of neighbors = 150293 818s Ave neighs/atom = 37.57325 818s Neighbor list builds = 5 818s Dangerous builds not checked 818s Total wall time: 0:00:00 818s autopkgtest [17:27:26]: test command1: -----------------------] 819s command1 PASS 819s autopkgtest [17:27:27]: test command1: - - - - - - - - - - results - - - - - - - - - - 819s autopkgtest [17:27:27]: @@@@@@@@@@@@@@@@@@@@ summary 819s crack PASS 819s dipole PASS 819s ellipse PASS 819s flow PASS 819s friction PASS 819s hugo PASS 819s command1 PASS 830s Creating nova instance adt-noble-s390x-lammps-20240316-171348-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)... 830s Creating nova instance adt-noble-s390x-lammps-20240316-171348-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240315.img (UUID 72478735-497c-4832-870c-30bdd7312d7f)...