1s autopkgtest [04:21:40]: starting date and time: 2024-03-23 04:21:40+0000 1s autopkgtest [04:21:40]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 1s autopkgtest [04:21:40]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vic_6bqh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:python-pysam --apt-upgrade gasic --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python-pysam/0.22.0+ds-1build1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-9.secgroup --name adt-noble-s390x-gasic-20240323-042139-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 131s autopkgtest [04:23:50]: testbed dpkg architecture: s390x 132s autopkgtest [04:23:51]: testbed apt version: 2.7.12 132s autopkgtest [04:23:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup 133s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 133s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [57.7 kB] 133s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4001 kB] 134s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 134s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [495 kB] 134s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [661 kB] 135s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 135s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 135s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 135s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4154 kB] 135s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 135s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [47.5 kB] 135s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 137s Fetched 9552 kB in 4s (2619 kB/s) 137s Reading package lists... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s Calculating upgrade... 140s The following packages will be upgraded: 140s libbsd0 141s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 141s Need to get 46.7 kB of archives. 141s After this operation, 0 B of additional disk space will be used. 141s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x libbsd0 s390x 0.12.1-1 [46.7 kB] 141s Fetched 46.7 kB in 0s (157 kB/s) 141s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 141s Preparing to unpack .../libbsd0_0.12.1-1_s390x.deb ... 141s Unpacking libbsd0:s390x (0.12.1-1) over (0.11.8-1) ... 141s Setting up libbsd0:s390x (0.12.1-1) ... 141s Processing triggers for libc-bin (2.39-0ubuntu2) ... 142s Reading package lists... 142s Building dependency tree... 142s Reading state information... 142s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 142s Unknown architecture, assuming PC-style ttyS0 142s sh: Attempting to set up Debian/Ubuntu apt sources automatically 142s sh: Distribution appears to be Ubuntu 143s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s eatmydata is already the newest version (131-1). 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 144s dbus is already the newest version (1.14.10-4ubuntu1). 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s rng-tools-debian is already the newest version (2.4). 145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Reading package lists... 145s Building dependency tree... 145s Reading state information... 145s The following packages will be REMOVED: 145s cloud-init* python3-configobj* python3-debconf* 146s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 146s After this operation, 3256 kB disk space will be freed. 146s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 146s Removing cloud-init (24.1.2-0ubuntu1) ... 146s Removing python3-configobj (5.0.8-3) ... 146s Removing python3-debconf (1.5.86) ... 146s Processing triggers for man-db (2.12.0-3) ... 147s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 147s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 147s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 148s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 148s invoke-rc.d: policy-rc.d denied execution of try-restart. 148s Reading package lists... 148s Building dependency tree... 148s Reading state information... 148s linux-generic is already the newest version (6.8.0-11.11+1). 148s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 149s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 149s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 149s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 151s Reading package lists... 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s Calculating upgrade... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 152s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 152s autopkgtest [04:24:11]: rebooting testbed after setup commands that affected boot 169s autopkgtest [04:24:28]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 172s autopkgtest [04:24:31]: @@@@@@@@@@@@@@@@@@@@ apt-source gasic 175s Get:1 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (dsc) [2112 B] 175s Get:2 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (tar) [12.4 kB] 175s Get:3 http://ftpmaster.internal/ubuntu noble/universe gasic 0.0.r19-8 (diff) [7305 kB] 175s gpgv: Signature made Thu Dec 29 18:00:34 2022 UTC 175s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 175s gpgv: issuer "tille@debian.org" 175s gpgv: Can't check signature: No public key 175s dpkg-source: warning: cannot verify inline signature for ./gasic_0.0.r19-8.dsc: no acceptable signature found 176s autopkgtest [04:24:35]: testing package gasic version 0.0.r19-8 179s autopkgtest [04:24:38]: build not needed 180s autopkgtest [04:24:39]: test run-unit-test: preparing testbed 183s Reading package lists... 183s Building dependency tree... 183s Reading state information... 183s Starting pkgProblemResolver with broken count: 1 183s Starting 2 pkgProblemResolver with broken count: 1 184s Investigating (0) gasic:s390x < none -> 0.0.r19-8 @un puN Ib > 184s Broken gasic:s390x Depends on python3-scipy:s390x < none | 1.11.4-6 @un uH > 184s Considering python3-scipy:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated python3-decorator:s390x 184s Re-Instated libblas3:s390x 184s Re-Instated libgfortran5:s390x 184s Re-Instated liblapack3:s390x 184s Re-Instated python3-numpy:s390x 184s Re-Instated liblbfgsb0:s390x 184s Re-Instated python3-scipy:s390x 184s Broken gasic:s390x Depends on python3-biopython:s390x < none | 1.81+dfsg-3 @un uH > 184s Considering python3-biopython:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated libfreetype6:s390x 184s Re-Instated libgomp1:s390x 184s Re-Instated libimagequant0:s390x 184s Re-Instated libjpeg-turbo8:s390x 184s Re-Instated libjpeg8:s390x 184s Re-Instated liblcms2-2:s390x 184s Re-Instated libopenjp2-7:s390x 184s Re-Instated libgraphite2-3:s390x 184s Re-Instated libharfbuzz0b:s390x 184s Re-Instated libraqm0:s390x 184s Re-Instated libdeflate0:s390x 184s Re-Instated libjbig0:s390x 184s Re-Instated libsharpyuv0:s390x 184s Re-Instated libwebp7:s390x 184s Re-Instated libtiff6:s390x 184s Re-Instated libwebpdemux2:s390x 184s Re-Instated libwebpmux3:s390x 184s Re-Instated python3-pil:s390x 184s Re-Instated fonts-dejavu-mono:s390x 184s Re-Instated fonts-dejavu-core:s390x 184s Re-Instated fontconfig-config:s390x 184s Re-Instated libfontconfig1:s390x 184s Re-Instated libpixman-1-0:s390x 184s Re-Instated libxcb-render0:s390x 184s Re-Instated libxcb-shm0:s390x 184s Re-Instated libxrender1:s390x 184s Re-Instated libcairo2:s390x 184s Re-Instated python3-cairo:s390x 184s Re-Instated python3-freetype:s390x 184s Re-Instated python3-rlpycairo:s390x 184s Re-Instated fonts-dejavu-extra:s390x 184s Re-Instated libfontenc1:s390x 184s Re-Instated x11-common:s390x 184s Re-Instated xfonts-encodings:s390x 184s Re-Instated xfonts-utils:s390x 184s Re-Instated fonts-urw-base35:s390x 184s Re-Instated python3-reportlab:s390x 184s Re-Instated sgml-base:s390x 184s Re-Instated xml-core:s390x 184s Re-Instated w3c-sgml-lib:s390x 184s Re-Instated python3-biopython:s390x 184s Broken gasic:s390x Depends on python3-pysam:s390x < none @un H > 184s Broken gasic:s390x Depends on python3-matplotlib:s390x < none | 3.6.3-1ubuntu3 @un uH > 184s Considering python3-matplotlib:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated libjs-jquery:s390x 184s Re-Instated libjs-jquery-ui:s390x 184s Re-Instated fonts-lyx:s390x 184s Re-Instated python-matplotlib-data:s390x 184s Re-Instated python3-dateutil:s390x 184s Re-Instated libtcl8.6:s390x 184s Re-Instated libxft2:s390x 184s Re-Instated libxss1:s390x 184s Re-Instated libtk8.6:s390x 184s Re-Instated tk8.6-blt2.5:s390x 184s Re-Instated blt:s390x 184s Re-Instated python3-tk:s390x 184s Re-Instated python3-pil.imagetk:s390x 184s Re-Instated python3-contourpy:s390x 184s Re-Instated python3-cycler:s390x 184s Re-Instated python3-brotli:s390x 184s Re-Instated python3-ufolib2:s390x 184s Re-Instated python3-mpmath:s390x 184s Re-Instated python3-sympy:s390x 184s Re-Instated python3-appdirs:s390x 184s Re-Instated python3-fs:s390x 184s Re-Instated libxslt1.1:s390x 184s Re-Instated python3-lxml:s390x 184s Re-Instated python3-lz4:s390x 184s Re-Instated python3-unicodedata2:s390x 184s Re-Instated unicode-data:s390x 184s Re-Instated python3-fonttools:s390x 184s Re-Instated python3-kiwisolver:s390x 184s Re-Instated python3-packaging:s390x 184s Re-Instated libqhull-r8.0:s390x 184s Re-Instated python3-matplotlib:s390x 184s Broken gasic:s390x Depends on bowtie:s390x < none | 1.3.1-3 @un uH > 184s Considering bowtie:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated bowtie:s390x 184s Broken gasic:s390x Depends on bowtie2:s390x < none @un H > 184s Broken gasic:s390x Depends on bwa:s390x < none | 0.7.17-7 @un uH > 184s Considering bwa:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated bwa:s390x 184s Broken gasic:s390x Depends on seqan-apps:s390x < none | 2.4.0+dfsg-16 @un uH > 184s Considering seqan-apps:s390x 1 as a solution to gasic:s390x 0 184s Re-Instated seqan-apps:s390x 184s Done 184s Some packages could not be installed. This may mean that you have 184s requested an impossible situation or if you are using the unstable 184s distribution that some required packages have not yet been created 184s or been moved out of Incoming. 184s The following information may help to resolve the situation: 184s 184s The following packages have unmet dependencies: 184s gasic : Depends: python3-pysam but it is not installable 184s Depends: bowtie2 but it is not installable 184s E: Unable to correct problems, you have held broken packages. 184s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from noble-proposed 184s Reading package lists... 184s Building dependency tree... 184s Reading state information... 185s Starting pkgProblemResolver with broken count: 1 185s Starting 2 pkgProblemResolver with broken count: 1 185s Investigating (0) gasic:s390x < none -> 0.0.r19-8 @un puN Ib > 185s Broken gasic:s390x Depends on python3-scipy:s390x < none | 1.11.4-6 @un uH > 185s Considering python3-scipy:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated python3-decorator:s390x 185s Re-Instated libblas3:s390x 185s Re-Instated libgfortran5:s390x 185s Re-Instated liblapack3:s390x 185s Re-Instated python3-numpy:s390x 185s Re-Instated liblbfgsb0:s390x 185s Re-Instated python3-scipy:s390x 185s Broken gasic:s390x Depends on python3-biopython:s390x < none | 1.81+dfsg-3 @un uH > 185s Considering python3-biopython:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated libfreetype6:s390x 185s Re-Instated libgomp1:s390x 185s Re-Instated libimagequant0:s390x 185s Re-Instated libjpeg-turbo8:s390x 185s Re-Instated libjpeg8:s390x 185s Re-Instated liblcms2-2:s390x 185s Re-Instated libopenjp2-7:s390x 185s Re-Instated libgraphite2-3:s390x 185s Re-Instated libharfbuzz0b:s390x 185s Re-Instated libraqm0:s390x 185s Re-Instated libdeflate0:s390x 185s Re-Instated libjbig0:s390x 185s Re-Instated libsharpyuv0:s390x 185s Re-Instated libwebp7:s390x 185s Re-Instated libtiff6:s390x 185s Re-Instated libwebpdemux2:s390x 185s Re-Instated libwebpmux3:s390x 185s Re-Instated python3-pil:s390x 185s Re-Instated fonts-dejavu-mono:s390x 185s Re-Instated fonts-dejavu-core:s390x 185s Re-Instated fontconfig-config:s390x 185s Re-Instated libfontconfig1:s390x 185s Re-Instated libpixman-1-0:s390x 185s Re-Instated libxcb-render0:s390x 185s Re-Instated libxcb-shm0:s390x 185s Re-Instated libxrender1:s390x 185s Re-Instated libcairo2:s390x 185s Re-Instated python3-cairo:s390x 185s Re-Instated python3-freetype:s390x 185s Re-Instated python3-rlpycairo:s390x 185s Re-Instated fonts-dejavu-extra:s390x 185s Re-Instated libfontenc1:s390x 185s Re-Instated x11-common:s390x 185s Re-Instated xfonts-encodings:s390x 185s Re-Instated xfonts-utils:s390x 185s Re-Instated fonts-urw-base35:s390x 185s Re-Instated python3-reportlab:s390x 185s Re-Instated sgml-base:s390x 185s Re-Instated xml-core:s390x 185s Re-Instated w3c-sgml-lib:s390x 185s Re-Instated python3-biopython:s390x 185s Broken gasic:s390x Depends on python3-pysam:s390x < none @un H > 185s Broken gasic:s390x Depends on python3-matplotlib:s390x < none | 3.6.3-1ubuntu3 @un uH > 185s Considering python3-matplotlib:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated libjs-jquery:s390x 185s Re-Instated libjs-jquery-ui:s390x 185s Re-Instated fonts-lyx:s390x 185s Re-Instated python-matplotlib-data:s390x 185s Re-Instated python3-dateutil:s390x 185s Re-Instated libtcl8.6:s390x 185s Re-Instated libxft2:s390x 185s Re-Instated libxss1:s390x 185s Re-Instated libtk8.6:s390x 185s Re-Instated tk8.6-blt2.5:s390x 185s Re-Instated blt:s390x 185s Re-Instated python3-tk:s390x 185s Re-Instated python3-pil.imagetk:s390x 185s Re-Instated python3-contourpy:s390x 185s Re-Instated python3-cycler:s390x 185s Re-Instated python3-brotli:s390x 185s Re-Instated python3-ufolib2:s390x 185s Re-Instated python3-mpmath:s390x 185s Re-Instated python3-sympy:s390x 185s Re-Instated python3-appdirs:s390x 185s Re-Instated python3-fs:s390x 185s Re-Instated libxslt1.1:s390x 185s Re-Instated python3-lxml:s390x 185s Re-Instated python3-lz4:s390x 185s Re-Instated python3-unicodedata2:s390x 185s Re-Instated unicode-data:s390x 185s Re-Instated python3-fonttools:s390x 185s Re-Instated python3-kiwisolver:s390x 185s Re-Instated python3-packaging:s390x 185s Re-Instated libqhull-r8.0:s390x 185s Re-Instated python3-matplotlib:s390x 185s Broken gasic:s390x Depends on bowtie:s390x < none | 1.3.1-3 @un uH > 185s Considering bowtie:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated bowtie:s390x 185s Broken gasic:s390x Depends on bowtie2:s390x < none @un H > 185s Broken gasic:s390x Depends on bwa:s390x < none | 0.7.17-7 @un uH > 185s Considering bwa:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated bwa:s390x 185s Broken gasic:s390x Depends on seqan-apps:s390x < none | 2.4.0+dfsg-16 @un uH > 185s Considering seqan-apps:s390x 1 as a solution to gasic:s390x 0 185s Re-Instated seqan-apps:s390x 185s Done 185s Some packages could not be installed. This may mean that you have 185s requested an impossible situation or if you are using the unstable 185s distribution that some required packages have not yet been created 185s or been moved out of Incoming. 185s The following information may help to resolve the situation: 185s 185s The following packages have unmet dependencies: 185s gasic : Depends: python3-pysam but it is not installable 185s Depends: bowtie2 but it is not installable 185s E: Unable to correct problems, you have held broken packages. 185s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 185s Reading package lists... 185s Building dependency tree... 185s Reading state information... 186s Starting pkgProblemResolver with broken count: 1 186s Starting 2 pkgProblemResolver with broken count: 1 186s Investigating (0) gasic:s390x < none -> 0.0.r19-8 @un puN Ib > 186s Broken gasic:s390x Depends on python3-scipy:s390x < none | 1.11.4-6 @un uH > 186s Considering python3-scipy:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated python3-decorator:s390x 186s Re-Instated libblas3:s390x 186s Re-Instated libgfortran5:s390x 186s Re-Instated liblapack3:s390x 186s Re-Instated python3-numpy:s390x 186s Re-Instated liblbfgsb0:s390x 186s Re-Instated python3-scipy:s390x 186s Broken gasic:s390x Depends on python3-biopython:s390x < none | 1.81+dfsg-3 @un uH > 186s Considering python3-biopython:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated libfreetype6:s390x 186s Re-Instated libgomp1:s390x 186s Re-Instated libimagequant0:s390x 186s Re-Instated libjpeg-turbo8:s390x 186s Re-Instated libjpeg8:s390x 186s Re-Instated liblcms2-2:s390x 186s Re-Instated libopenjp2-7:s390x 186s Re-Instated libgraphite2-3:s390x 186s Re-Instated libharfbuzz0b:s390x 186s Re-Instated libraqm0:s390x 186s Re-Instated libdeflate0:s390x 186s Re-Instated libjbig0:s390x 186s Re-Instated libsharpyuv0:s390x 186s Re-Instated libwebp7:s390x 186s Re-Instated libtiff6:s390x 186s Re-Instated libwebpdemux2:s390x 186s Re-Instated libwebpmux3:s390x 186s Re-Instated python3-pil:s390x 186s Re-Instated fonts-dejavu-mono:s390x 186s Re-Instated fonts-dejavu-core:s390x 186s Re-Instated fontconfig-config:s390x 186s Re-Instated libfontconfig1:s390x 186s Re-Instated libpixman-1-0:s390x 186s Re-Instated libxcb-render0:s390x 186s Re-Instated libxcb-shm0:s390x 186s Re-Instated libxrender1:s390x 186s Re-Instated libcairo2:s390x 186s Re-Instated python3-cairo:s390x 186s Re-Instated python3-freetype:s390x 186s Re-Instated python3-rlpycairo:s390x 186s Re-Instated fonts-dejavu-extra:s390x 186s Re-Instated libfontenc1:s390x 186s Re-Instated x11-common:s390x 186s Re-Instated xfonts-encodings:s390x 186s Re-Instated xfonts-utils:s390x 186s Re-Instated fonts-urw-base35:s390x 186s Re-Instated python3-reportlab:s390x 186s Re-Instated sgml-base:s390x 186s Re-Instated xml-core:s390x 186s Re-Instated w3c-sgml-lib:s390x 186s Re-Instated python3-biopython:s390x 186s Broken gasic:s390x Depends on python3-pysam:s390x < none @un H > 186s Broken gasic:s390x Depends on python3-matplotlib:s390x < none | 3.6.3-1ubuntu3 @un uH > 186s Considering python3-matplotlib:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated libjs-jquery:s390x 186s Re-Instated libjs-jquery-ui:s390x 186s Re-Instated fonts-lyx:s390x 186s Re-Instated python-matplotlib-data:s390x 186s Re-Instated python3-dateutil:s390x 186s Re-Instated libtcl8.6:s390x 186s Re-Instated libxft2:s390x 186s Re-Instated libxss1:s390x 186s Re-Instated libtk8.6:s390x 186s Re-Instated tk8.6-blt2.5:s390x 186s Re-Instated blt:s390x 186s Re-Instated python3-tk:s390x 186s Re-Instated python3-pil.imagetk:s390x 186s Re-Instated python3-contourpy:s390x 186s Re-Instated python3-cycler:s390x 186s Re-Instated python3-brotli:s390x 186s Re-Instated python3-ufolib2:s390x 186s Re-Instated python3-mpmath:s390x 186s Re-Instated python3-sympy:s390x 186s Re-Instated python3-appdirs:s390x 186s Re-Instated python3-fs:s390x 186s Re-Instated libxslt1.1:s390x 186s Re-Instated python3-lxml:s390x 186s Re-Instated python3-lz4:s390x 186s Re-Instated python3-unicodedata2:s390x 186s Re-Instated unicode-data:s390x 186s Re-Instated python3-fonttools:s390x 186s Re-Instated python3-kiwisolver:s390x 186s Re-Instated python3-packaging:s390x 186s Re-Instated libqhull-r8.0:s390x 186s Re-Instated python3-matplotlib:s390x 186s Broken gasic:s390x Depends on bowtie:s390x < none | 1.3.1-3 @un uH > 186s Considering bowtie:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated bowtie:s390x 186s Broken gasic:s390x Depends on bowtie2:s390x < none @un H > 186s Broken gasic:s390x Depends on bwa:s390x < none | 0.7.17-7 @un uH > 186s Considering bwa:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated bwa:s390x 186s Broken gasic:s390x Depends on seqan-apps:s390x < none | 2.4.0+dfsg-16 @un uH > 186s Considering seqan-apps:s390x 1 as a solution to gasic:s390x 9999 186s Re-Instated seqan-apps:s390x 186s Done 186s Some packages could not be installed. This may mean that you have 186s requested an impossible situation or if you are using the unstable 186s distribution that some required packages have not yet been created 186s or been moved out of Incoming. 186s The following information may help to resolve the situation: 186s 186s The following packages have unmet dependencies: 186s gasic : Depends: python3-pysam but it is not installable 186s Depends: bowtie2 but it is not installable 186s E: Unable to correct problems, you have held broken packages. 186s run-unit-test FAIL badpkg 186s blame: gasic 186s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 186s autopkgtest [04:24:45]: @@@@@@@@@@@@@@@@@@@@ summary 186s run-unit-test FAIL badpkg 186s blame: gasic 186s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 198s Creating nova instance adt-noble-s390x-gasic-20240323-042139-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-s390x-server-20240322.img (UUID c8671f9a-0e89-48e3-af4f-3c79b89294e8)...