0s autopkgtest [09:27:17]: starting date and time: 2024-03-23 09:27:17+0000 0s autopkgtest [09:27:17]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [09:27:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dk7a2qjl/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:samtools,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade dwgsim --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=samtools/1.19.2-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-14.secgroup --name adt-noble-s390x-dwgsim-20240323-092717-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 122s autopkgtest [09:29:19]: testbed dpkg architecture: s390x 122s autopkgtest [09:29:19]: testbed apt version: 2.7.12 122s autopkgtest [09:29:19]: @@@@@@@@@@@@@@@@@@@@ test bed setup 123s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 123s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 123s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 123s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3972 kB] 123s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 123s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [651 kB] 123s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 123s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 123s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 123s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4148 kB] 124s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 124s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.8 kB] 124s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 126s Fetched 9504 kB in 2s (3815 kB/s) 126s Reading package lists... 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 129s Calculating upgrade... 129s The following packages will be REMOVED: 129s libssl3 129s The following NEW packages will be installed: 129s libssl3t64 129s The following packages have been kept back: 129s curl 129s The following packages will be upgraded: 129s libbsd0 libc-bin libc6 locales openssl 129s 5 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 129s Need to get 10.5 MB of archives. 129s After this operation, 241 kB of additional disk space will be used. 129s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x libc6 s390x 2.39-0ubuntu6 [2847 kB] 130s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libc-bin s390x 2.39-0ubuntu6 [654 kB] 130s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 130s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 130s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libbsd0 s390x 0.12.1-1 [46.7 kB] 130s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x locales all 2.39-0ubuntu6 [4232 kB] 130s Preconfiguring packages ... 131s Fetched 10.5 MB in 1s (10.3 MB/s) 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 131s Preparing to unpack .../libc6_2.39-0ubuntu6_s390x.deb ... 131s Unpacking libc6:s390x (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 131s Setting up libc6:s390x (2.39-0ubuntu6) ... 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 131s Preparing to unpack .../libc-bin_2.39-0ubuntu6_s390x.deb ... 131s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 131s Setting up libc-bin (2.39-0ubuntu6) ... 131s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 131s Preparing to unpack .../openssl_3.0.13-0ubuntu2_s390x.deb ... 131s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 132s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 132s wget depends on libssl3 (>= 3.0.0). 132s tnftp depends on libssl3 (>= 3.0.0). 132s tcpdump depends on libssl3 (>= 3.0.0). 132s systemd-resolved depends on libssl3 (>= 3.0.0). 132s systemd depends on libssl3 (>= 3.0.0). 132s sudo depends on libssl3 (>= 3.0.0). 132s s390-tools depends on libssl3 (>= 3.0.0). 132s rsync depends on libssl3 (>= 3.0.0). 132s python3-cryptography depends on libssl3 (>= 3.0.0). 132s openssh-server depends on libssl3 (>= 3.0.10). 132s openssh-client depends on libssl3 (>= 3.0.10). 132s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 132s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 132s libssh-4:s390x depends on libssl3 (>= 3.0.0). 132s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 132s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 132s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 132s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 132s libnvme1 depends on libssl3 (>= 3.0.0). 132s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 132s libkmod2:s390x depends on libssl3 (>= 3.0.0). 132s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 132s libcurl4:s390x depends on libssl3 (>= 3.0.0). 132s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 132s kmod depends on libssl3 (>= 3.0.0). 132s dhcpcd-base depends on libssl3 (>= 3.0.0). 132s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 132s 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 132s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 132s Selecting previously unselected package libssl3t64:s390x. 132s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52159 files and directories currently installed.) 132s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 132s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 132s Preparing to unpack .../libbsd0_0.12.1-1_s390x.deb ... 132s Unpacking libbsd0:s390x (0.12.1-1) over (0.11.8-1) ... 132s Preparing to unpack .../locales_2.39-0ubuntu6_all.deb ... 132s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 132s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 132s Setting up locales (2.39-0ubuntu6) ... 133s Generating locales (this might take a while)... 134s en_US.UTF-8... done 134s Generation complete. 134s Setting up openssl (3.0.13-0ubuntu2) ... 134s Setting up libbsd0:s390x (0.12.1-1) ... 134s Processing triggers for man-db (2.12.0-3) ... 135s Processing triggers for libc-bin (2.39-0ubuntu6) ... 135s Reading package lists... 135s Building dependency tree... 135s Reading state information... 136s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 136s Unknown architecture, assuming PC-style ttyS0 136s sh: Attempting to set up Debian/Ubuntu apt sources automatically 136s sh: Distribution appears to be Ubuntu 137s Reading package lists... 137s Building dependency tree... 137s Reading state information... 137s eatmydata is already the newest version (131-1). 137s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 137s Reading package lists... 137s Building dependency tree... 137s Reading state information... 137s dbus is already the newest version (1.14.10-4ubuntu1). 137s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 137s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s rng-tools-debian is already the newest version (2.4). 138s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s The following packages will be REMOVED: 138s cloud-init* python3-configobj* python3-debconf* 138s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 138s After this operation, 3256 kB disk space will be freed. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52172 files and directories currently installed.) 138s Removing cloud-init (24.1.2-0ubuntu1) ... 139s Removing python3-configobj (5.0.8-3) ... 139s Removing python3-debconf (1.5.86) ... 139s Processing triggers for man-db (2.12.0-3) ... 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51783 files and directories currently installed.) 139s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 140s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 140s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 140s invoke-rc.d: policy-rc.d denied execution of try-restart. 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s linux-generic is already the newest version (6.8.0-11.11+1). 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 141s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 141s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 141s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 143s Reading package lists... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Calculating upgrade... 143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 144s autopkgtest [09:29:41]: rebooting testbed after setup commands that affected boot 163s autopkgtest [09:30:00]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 166s autopkgtest [09:30:03]: @@@@@@@@@@@@@@@@@@@@ apt-source dwgsim 168s Get:1 http://ftpmaster.internal/ubuntu noble/universe dwgsim 0.1.14-2 (dsc) [1997 B] 168s Get:2 http://ftpmaster.internal/ubuntu noble/universe dwgsim 0.1.14-2 (tar) [2206 kB] 168s Get:3 http://ftpmaster.internal/ubuntu noble/universe dwgsim 0.1.14-2 (diff) [7536 B] 168s gpgv: Signature made Fri Aug 19 09:28:01 2022 UTC 168s gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 168s gpgv: issuer "nilesh@debian.org" 168s gpgv: Can't check signature: No public key 168s dpkg-source: warning: cannot verify inline signature for ./dwgsim_0.1.14-2.dsc: no acceptable signature found 168s autopkgtest [09:30:05]: testing package dwgsim version 0.1.14-2 168s autopkgtest [09:30:05]: build not needed 169s autopkgtest [09:30:06]: test run-unit-test: preparing testbed 174s Reading package lists... 175s Building dependency tree... 175s Reading state information... 175s Starting pkgProblemResolver with broken count: 0 175s Starting 2 pkgProblemResolver with broken count: 0 175s Done 175s The following additional packages will be installed: 175s dwgsim libdeflate0 libhts3 libhtscodecs2 samtools 175s Suggested packages: 175s cwltool 175s The following NEW packages will be installed: 175s autopkgtest-satdep dwgsim libdeflate0 libhts3 libhtscodecs2 samtools 175s 0 upgraded, 6 newly installed, 0 to remove and 0 not upgraded. 175s Need to get 1251 kB/1252 kB of archives. 175s After this operation, 2899 kB of additional disk space will be used. 175s Get:1 /tmp/autopkgtest.eyKeRi/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B] 175s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x dwgsim s390x 0.1.14-2 [42.4 kB] 176s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 176s Get:4 http://ftpmaster.internal/ubuntu noble/universe s390x libhtscodecs2 s390x 1.6.0-1 [87.2 kB] 176s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x libhts3 s390x 1.18+ds-1 [463 kB] 176s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x samtools s390x 1.19.2-1 [613 kB] 176s Fetched 1251 kB in 1s (1975 kB/s) 176s Selecting previously unselected package dwgsim. 176s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51728 files and directories currently installed.) 176s Preparing to unpack .../0-dwgsim_0.1.14-2_s390x.deb ... 176s Unpacking dwgsim (0.1.14-2) ... 176s Selecting previously unselected package libdeflate0:s390x. 176s Preparing to unpack .../1-libdeflate0_1.19-1_s390x.deb ... 176s Unpacking libdeflate0:s390x (1.19-1) ... 176s Selecting previously unselected package libhtscodecs2:s390x. 176s Preparing to unpack .../2-libhtscodecs2_1.6.0-1_s390x.deb ... 176s Unpacking libhtscodecs2:s390x (1.6.0-1) ... 176s Selecting previously unselected package libhts3:s390x. 176s Preparing to unpack .../3-libhts3_1.18+ds-1_s390x.deb ... 176s Unpacking libhts3:s390x (1.18+ds-1) ... 176s Selecting previously unselected package samtools. 176s Preparing to unpack .../4-samtools_1.19.2-1_s390x.deb ... 176s Unpacking samtools (1.19.2-1) ... 176s Selecting previously unselected package autopkgtest-satdep. 176s Preparing to unpack .../5-1-autopkgtest-satdep.deb ... 176s Unpacking autopkgtest-satdep (0) ... 176s Setting up libhtscodecs2:s390x (1.6.0-1) ... 176s Setting up libdeflate0:s390x (1.19-1) ... 176s Setting up dwgsim (0.1.14-2) ... 176s Setting up libhts3:s390x (1.18+ds-1) ... 176s Setting up samtools (1.19.2-1) ... 176s Setting up autopkgtest-satdep (0) ... 176s Processing triggers for man-db (2.12.0-3) ... 177s Processing triggers for libc-bin (2.39-0ubuntu6) ... 179s (Reading database ... 51847 files and directories currently installed.) 179s Removing autopkgtest-satdep (0) ... 179s autopkgtest [09:30:16]: test run-unit-test: [----------------------- 180s BEGIN TEST 180s /tmp/autopkgtest.eyKeRi/autopkgtest_tmp /tmp/autopkgtest.eyKeRi/autopkgtest_tmp 180s ls: cannot access '*gz': No such file or directory 180s /tmp/autopkgtest.eyKeRi/autopkgtest_tmp 180s [dwgsim_core] seq1 length: 1575 180s [dwgsim_core] seq2 length: 1584 180s [dwgsim_core] 2 sequences, total length: 3159 180s [dwgsim_core] Currently on: 181s 0 [dwgsim_core] 0 [dwgsim_core] 4986 [dwgsim_core] 10000 181s [dwgsim_core] Complete! 181s PASS 181s autopkgtest [09:30:18]: test run-unit-test: -----------------------] 182s run-unit-test PASS 182s autopkgtest [09:30:19]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 182s autopkgtest [09:30:19]: @@@@@@@@@@@@@@@@@@@@ summary 182s run-unit-test PASS 194s Creating nova instance adt-noble-s390x-dwgsim-20240323-092717-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240322.img (UUID c8671f9a-0e89-48e3-af4f-3c79b89294e8)...