0s autopkgtest [09:26:48]: starting date and time: 2024-03-23 09:26:48+0000 0s autopkgtest [09:26:48]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [09:26:48]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bk3_b9x_/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:samtools,src:curl,src:gnutls28,src:htslib,src:libpsl,src:nettle,src:openssl --apt-upgrade drop-seq --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=samtools/1.19.2-1build1 curl/8.5.0-2ubuntu7 gnutls28/3.8.3-1.1ubuntu2 htslib/1.19+ds-1.1build2 libpsl/0.21.2-1.1 nettle/3.9.1-2.2 openssl/3.0.13-0ubuntu2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-s390x-2.secgroup --name adt-noble-s390x-drop-seq-20240323-092648-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 141s autopkgtest [09:29:09]: testbed dpkg architecture: s390x 141s autopkgtest [09:29:09]: testbed apt version: 2.7.12 141s autopkgtest [09:29:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 142s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 143s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 143s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.9 kB] 143s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3972 kB] 143s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 143s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [651 kB] 143s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 143s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 143s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 143s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4148 kB] 143s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 143s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [46.8 kB] 143s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 146s Fetched 9504 kB in 3s (3488 kB/s) 146s Reading package lists... 148s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Calculating upgrade... 149s The following packages will be REMOVED: 149s libssl3 149s The following NEW packages will be installed: 149s libssl3t64 149s The following packages have been kept back: 149s curl 149s The following packages will be upgraded: 149s libbsd0 libc-bin libc6 locales openssl 149s 5 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 149s Need to get 10.5 MB of archives. 149s After this operation, 241 kB of additional disk space will be used. 149s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x libc6 s390x 2.39-0ubuntu6 [2847 kB] 150s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libc-bin s390x 2.39-0ubuntu6 [654 kB] 150s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 150s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 150s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libbsd0 s390x 0.12.1-1 [46.7 kB] 150s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x locales all 2.39-0ubuntu6 [4232 kB] 151s Preconfiguring packages ... 151s Fetched 10.5 MB in 1s (8646 kB/s) 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 151s Preparing to unpack .../libc6_2.39-0ubuntu6_s390x.deb ... 151s Unpacking libc6:s390x (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 151s Setting up libc6:s390x (2.39-0ubuntu6) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 152s Preparing to unpack .../libc-bin_2.39-0ubuntu6_s390x.deb ... 152s Unpacking libc-bin (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 152s Setting up libc-bin (2.39-0ubuntu6) ... 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 152s Preparing to unpack .../openssl_3.0.13-0ubuntu2_s390x.deb ... 152s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 152s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 152s wget depends on libssl3 (>= 3.0.0). 152s tnftp depends on libssl3 (>= 3.0.0). 152s tcpdump depends on libssl3 (>= 3.0.0). 152s systemd-resolved depends on libssl3 (>= 3.0.0). 152s systemd depends on libssl3 (>= 3.0.0). 152s sudo depends on libssl3 (>= 3.0.0). 152s s390-tools depends on libssl3 (>= 3.0.0). 152s rsync depends on libssl3 (>= 3.0.0). 152s python3-cryptography depends on libssl3 (>= 3.0.0). 152s openssh-server depends on libssl3 (>= 3.0.10). 152s openssh-client depends on libssl3 (>= 3.0.10). 152s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 152s libsystemd-shared:s390x depends on libssl3 (>= 3.0.0). 152s libssh-4:s390x depends on libssl3 (>= 3.0.0). 152s libsasl2-modules:s390x depends on libssl3 (>= 3.0.0). 152s libsasl2-2:s390x depends on libssl3 (>= 3.0.0). 152s libpython3.12-minimal:s390x depends on libssl3 (>= 3.0.0). 152s libpython3.11-minimal:s390x depends on libssl3 (>= 3.0.0). 152s libnvme1 depends on libssl3 (>= 3.0.0). 152s libkrb5-3:s390x depends on libssl3 (>= 3.0.0). 152s libkmod2:s390x depends on libssl3 (>= 3.0.0). 152s libfido2-1:s390x depends on libssl3 (>= 3.0.0). 152s libcurl4:s390x depends on libssl3 (>= 3.0.0). 152s libcryptsetup12:s390x depends on libssl3 (>= 3.0.0). 152s kmod depends on libssl3 (>= 3.0.0). 152s dhcpcd-base depends on libssl3 (>= 3.0.0). 152s bind9-libs:s390x depends on libssl3 (>= 3.0.0). 152s 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 152s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 152s Selecting previously unselected package libssl3t64:s390x. 152s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52159 files and directories currently installed.) 152s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 152s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 152s Preparing to unpack .../libbsd0_0.12.1-1_s390x.deb ... 152s Unpacking libbsd0:s390x (0.12.1-1) over (0.11.8-1) ... 152s Preparing to unpack .../locales_2.39-0ubuntu6_all.deb ... 152s Unpacking locales (2.39-0ubuntu6) over (2.39-0ubuntu2) ... 152s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 152s Setting up locales (2.39-0ubuntu6) ... 153s Generating locales (this might take a while)... 154s en_US.UTF-8... done 154s Generation complete. 154s Setting up openssl (3.0.13-0ubuntu2) ... 154s Setting up libbsd0:s390x (0.12.1-1) ... 154s Processing triggers for man-db (2.12.0-3) ... 155s Processing triggers for libc-bin (2.39-0ubuntu6) ... 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 156s Unknown architecture, assuming PC-style ttyS0 156s sh: Attempting to set up Debian/Ubuntu apt sources automatically 156s sh: Distribution appears to be Ubuntu 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s eatmydata is already the newest version (131-1). 157s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s dbus is already the newest version (1.14.10-4ubuntu1). 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s rng-tools-debian is already the newest version (2.4). 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 159s The following packages will be REMOVED: 159s cloud-init* python3-configobj* python3-debconf* 159s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 159s After this operation, 3256 kB disk space will be freed. 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52172 files and directories currently installed.) 159s Removing cloud-init (24.1.2-0ubuntu1) ... 159s Removing python3-configobj (5.0.8-3) ... 159s Removing python3-debconf (1.5.86) ... 159s Processing triggers for man-db (2.12.0-3) ... 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51783 files and directories currently installed.) 160s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 160s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 160s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 160s invoke-rc.d: policy-rc.d denied execution of try-restart. 160s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s linux-generic is already the newest version (6.8.0-11.11+1). 161s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 161s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 161s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 161s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 163s Reading package lists... 163s Reading package lists... 163s Building dependency tree... 163s Reading state information... 163s Calculating upgrade... 163s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 163s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s autopkgtest [09:29:32]: rebooting testbed after setup commands that affected boot 182s autopkgtest [09:29:50]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 184s autopkgtest [09:29:52]: @@@@@@@@@@@@@@@@@@@@ apt-source drop-seq 191s Get:1 http://ftpmaster.internal/ubuntu noble/universe drop-seq 2.5.4+dfsg-1 (dsc) [2404 B] 191s Get:2 http://ftpmaster.internal/ubuntu noble/universe drop-seq 2.5.4+dfsg-1 (tar) [143 MB] 191s Get:3 http://ftpmaster.internal/ubuntu noble/universe drop-seq 2.5.4+dfsg-1 (diff) [63.5 kB] 192s gpgv: Signature made Mon Aug 21 20:11:40 2023 UTC 192s gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 192s gpgv: Can't check signature: No public key 192s dpkg-source: warning: cannot verify inline signature for ./drop-seq_2.5.4+dfsg-1.dsc: no acceptable signature found 198s autopkgtest [09:30:06]: testing package drop-seq version 2.5.4+dfsg-1 198s autopkgtest [09:30:06]: build not needed 204s autopkgtest [09:30:12]: test run-unit-test: preparing testbed 210s Reading package lists... 210s Building dependency tree... 210s Reading state information... 210s Starting pkgProblemResolver with broken count: 1 210s Starting 2 pkgProblemResolver with broken count: 1 210s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 210s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 210s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 210s Re-Instated libcommons-jexl2-java:s390x 210s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 210s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 210s Re-Instated libmjson-java:s390x 210s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 210s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 210s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 210s Re-Instated librhino-java:s390x 210s Done 210s Some packages could not be installed. This may mean that you have 210s requested an impossible situation or if you are using the unstable 210s distribution that some required packages have not yet been created 210s or been moved out of Incoming. 210s The following information may help to resolve the situation: 210s 210s The following packages have unmet dependencies: 210s libhtsjdk-java : Depends: libngs-java but it is not installable 210s E: Unable to correct problems, you have held broken packages. 210s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from noble-proposed 211s Reading package lists... 211s Building dependency tree... 211s Reading state information... 211s Starting pkgProblemResolver with broken count: 1 211s Starting 2 pkgProblemResolver with broken count: 1 211s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 211s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 211s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 211s Re-Instated libcommons-jexl2-java:s390x 211s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 211s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 211s Re-Instated libmjson-java:s390x 211s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 211s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 211s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 211s Re-Instated librhino-java:s390x 211s Done 211s Some packages could not be installed. This may mean that you have 211s requested an impossible situation or if you are using the unstable 211s distribution that some required packages have not yet been created 211s or been moved out of Incoming. 211s The following information may help to resolve the situation: 211s 211s The following packages have unmet dependencies: 212s libhtsjdk-java : Depends: libngs-java but it is not installable 212s E: Unable to correct problems, you have held broken packages. 212s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 212s Reading package lists... 212s Building dependency tree... 212s Reading state information... 212s Starting pkgProblemResolver with broken count: 1 212s Starting 2 pkgProblemResolver with broken count: 1 212s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 212s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 212s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 212s Re-Instated libcommons-jexl2-java:s390x 212s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 212s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 212s Re-Instated libmjson-java:s390x 212s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 212s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 212s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 3 212s Re-Instated librhino-java:s390x 212s Done 212s Some packages could not be installed. This may mean that you have 212s requested an impossible situation or if you are using the unstable 212s distribution that some required packages have not yet been created 212s or been moved out of Incoming. 212s The following information may help to resolve the situation: 212s 212s The following packages have unmet dependencies: 212s libhtsjdk-java : Depends: libngs-java but it is not installable 212s E: Unable to correct problems, you have held broken packages. 212s run-unit-test SKIP installation fails and skip-not-installable set 212s autopkgtest [09:30:20]: @@@@@@@@@@@@@@@@@@@@ summary 212s run-unit-test SKIP installation fails and skip-not-installable set 224s Creating nova instance adt-noble-s390x-drop-seq-20240323-092648-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240322.img (UUID c8671f9a-0e89-48e3-af4f-3c79b89294e8)...