0s autopkgtest [02:02:28]: starting date and time: 2024-04-19 02:02:28+0000
  0s autopkgtest [02:02:28]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline
  0s autopkgtest [02:02:28]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.iywn032f/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:nodejs --apt-upgrade cwl-utils --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=nodejs/18.19.1+dfsg-6ubuntu5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos01-s390x-3.secgroup --name adt-noble-s390x-cwl-utils-20240419-020228-juju-7f2275-prod-proposed-migration-environment-3-aa97ea07-54fc-478c-915d-477277f75040 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/
172s autopkgtest [02:05:20]: testbed dpkg architecture: s390x
172s autopkgtest [02:05:20]: testbed apt version: 2.7.14build2
172s autopkgtest [02:05:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup
173s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
173s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B]
173s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB]
173s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [338 kB]
173s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [53.4 kB]
173s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [93.9 kB]
173s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B]
173s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [976 B]
173s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B]
173s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [427 kB]
174s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B]
174s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B]
175s Fetched 1055 kB in 1s (839 kB/s)
175s Reading package lists...
176s sh: 4: dhclient: not found
177s Reading package lists...
178s Building dependency tree...
178s Reading state information...
178s Calculating upgrade...
178s The following packages will be upgraded:
178s   apport apport-core-dump-handler libkeyutils1 libnetplan1 libnuma1 make
178s   man-db netcat-openbsd netplan-generator netplan.io numactl python3-apport
178s   python3-netplan python3-problem-report
178s 14 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
178s Need to get 2057 kB of archives.
178s After this operation, 1024 B of additional disk space will be used.
178s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB]
178s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x python3-apport all 2.28.1-0ubuntu1 [92.1 kB]
179s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB]
179s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x apport all 2.28.1-0ubuntu1 [83.5 kB]
179s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libkeyutils1 s390x 1.6.3-3build1 [9556 B]
179s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x netplan-generator s390x 1.0-2ubuntu1 [59.2 kB]
179s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x python3-netplan s390x 1.0-2ubuntu1 [23.0 kB]
179s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x netplan.io s390x 1.0-2ubuntu1 [65.8 kB]
179s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnetplan1 s390x 1.0-2ubuntu1 [126 kB]
179s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x netcat-openbsd s390x 1.226-1ubuntu2 [44.0 kB]
179s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libnuma1 s390x 2.0.18-1build1 [25.1 kB]
179s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x man-db s390x 2.12.0-4build2 [1253 kB]
179s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x make s390x 4.3-4.1build2 [196 kB]
179s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x numactl s390x 2.0.18-1build1 [40.0 kB]
179s Preconfiguring packages ...
179s Fetched 2057 kB in 1s (2494 kB/s)
179s (Reading database ... 
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(Reading database ... 15%
(Reading database ... 20%
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 78323 files and directories currently installed.)
179s Preparing to unpack .../00-python3-problem-report_2.28.1-0ubuntu1_all.deb ...
180s Unpacking python3-problem-report (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
180s Preparing to unpack .../01-python3-apport_2.28.1-0ubuntu1_all.deb ...
180s Unpacking python3-apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
180s Preparing to unpack .../02-apport-core-dump-handler_2.28.1-0ubuntu1_all.deb ...
180s Unpacking apport-core-dump-handler (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
180s Preparing to unpack .../03-apport_2.28.1-0ubuntu1_all.deb ...
180s Unpacking apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
180s Preparing to unpack .../04-libkeyutils1_1.6.3-3build1_s390x.deb ...
180s Unpacking libkeyutils1:s390x (1.6.3-3build1) over (1.6.3-3) ...
180s Preparing to unpack .../05-netplan-generator_1.0-2ubuntu1_s390x.deb ...
180s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
180s Unpacking netplan-generator (1.0-2ubuntu1) over (1.0-2build1) ...
180s Preparing to unpack .../06-python3-netplan_1.0-2ubuntu1_s390x.deb ...
180s Unpacking python3-netplan (1.0-2ubuntu1) over (1.0-2build1) ...
180s Preparing to unpack .../07-netplan.io_1.0-2ubuntu1_s390x.deb ...
180s Unpacking netplan.io (1.0-2ubuntu1) over (1.0-2build1) ...
180s Preparing to unpack .../08-libnetplan1_1.0-2ubuntu1_s390x.deb ...
180s Unpacking libnetplan1:s390x (1.0-2ubuntu1) over (1.0-2build1) ...
180s Preparing to unpack .../09-netcat-openbsd_1.226-1ubuntu2_s390x.deb ...
180s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ...
180s Preparing to unpack .../10-libnuma1_2.0.18-1build1_s390x.deb ...
180s Unpacking libnuma1:s390x (2.0.18-1build1) over (2.0.18-1) ...
180s Preparing to unpack .../11-man-db_2.12.0-4build2_s390x.deb ...
180s Unpacking man-db (2.12.0-4build2) over (2.12.0-4build1) ...
180s Preparing to unpack .../12-make_4.3-4.1build2_s390x.deb ...
180s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ...
180s Preparing to unpack .../13-numactl_2.0.18-1build1_s390x.deb ...
180s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ...
181s Setting up libkeyutils1:s390x (1.6.3-3build1) ...
181s Setting up python3-problem-report (2.28.1-0ubuntu1) ...
181s Setting up netcat-openbsd (1.226-1ubuntu2) ...
181s Setting up libnetplan1:s390x (1.0-2ubuntu1) ...
181s Setting up man-db (2.12.0-4build2) ...
181s Updating database of manual pages ...
183s man-db.service is a disabled or a static unit not running, not starting it.
183s Setting up python3-apport (2.28.1-0ubuntu1) ...
183s Setting up make (4.3-4.1build2) ...
183s Setting up libnuma1:s390x (2.0.18-1build1) ...
183s Setting up python3-netplan (1.0-2ubuntu1) ...
183s Setting up netplan-generator (1.0-2ubuntu1) ...
183s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
183s Setting up numactl (2.0.18-1build1) ...
183s Setting up netplan.io (1.0-2ubuntu1) ...
183s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ...
184s Setting up apport (2.28.1-0ubuntu1) ...
184s Installing new version of config file /etc/apport/crashdb.conf ...
185s apport-autoreport.service is a disabled or a static unit not running, not starting it.
185s Processing triggers for dbus (1.14.10-4ubuntu4) ...
185s Processing triggers for libc-bin (2.39-0ubuntu8) ...
185s Reading package lists...
186s Building dependency tree...
186s Reading state information...
186s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
186s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
187s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
187s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
187s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
188s Reading package lists...
188s Reading package lists...
188s Building dependency tree...
188s Reading state information...
189s Calculating upgrade...
189s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
189s Reading package lists...
189s Building dependency tree...
189s Reading state information...
189s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
190s autopkgtest [02:05:38]: rebooting testbed after setup commands that affected boot
238s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
250s autopkgtest [02:06:38]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr  4 21:54:17 UTC 2024
253s autopkgtest [02:06:41]: @@@@@@@@@@@@@@@@@@@@ apt-source cwl-utils
256s Get:1 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (dsc) [2459 B]
256s Get:2 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (tar) [304 kB]
256s Get:3 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (diff) [3584 B]
257s gpgv: Signature made Tue Jan 23 11:29:08 2024 UTC
257s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
257s gpgv: Can't check signature: No public key
257s dpkg-source: warning: cannot verify inline signature for ./cwl-utils_0.32-1.dsc: no acceptable signature found
257s autopkgtest [02:06:45]: testing package cwl-utils version 0.32-1
257s autopkgtest [02:06:45]: build not needed
259s autopkgtest [02:06:47]: test run-tests: preparing testbed
261s Reading package lists...
261s Building dependency tree...
261s Reading state information...
261s Starting pkgProblemResolver with broken count: 0
261s Starting 2 pkgProblemResolver with broken count: 0
261s Done
261s The following additional packages will be installed:
261s   cwl-upgrader cwl-utils cwlformat fonts-glyphicons-halflings libcares2
261s   libjs-bootstrap libnode109 node-acorn node-busboy node-cjs-module-lexer
261s   node-undici node-xtend nodejs python3-cachecontrol python3-cwl-utils
261s   python3-execnet python3-filelock python3-iniconfig python3-isodate
261s   python3-mistune python3-mock python3-msgpack python3-mypy-extensions
261s   python3-packaging python3-pluggy python3-pytest python3-pytest-mock
261s   python3-pytest-xdist python3-rdflib python3-ruamel.yaml
261s   python3-ruamel.yaml.clib python3-schema-salad
261s Suggested packages:
261s   cwltool npm execnet-doc python-mock-doc python-pytest-mock-doc
261s   python-rdflib-doc
261s Recommended packages:
261s   nodejs-doc python3-sparqlwrapper python3-html5lib cwltool black
261s The following NEW packages will be installed:
261s   autopkgtest-satdep cwl-upgrader cwl-utils cwlformat
261s   fonts-glyphicons-halflings libcares2 libjs-bootstrap libnode109 node-acorn
261s   node-busboy node-cjs-module-lexer node-undici node-xtend nodejs
261s   python3-cachecontrol python3-cwl-utils python3-execnet python3-filelock
261s   python3-iniconfig python3-isodate python3-mistune python3-mock
261s   python3-msgpack python3-mypy-extensions python3-packaging python3-pluggy
261s   python3-pytest python3-pytest-mock python3-pytest-xdist python3-rdflib
261s   python3-ruamel.yaml python3-ruamel.yaml.clib python3-schema-salad
261s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded.
261s Need to get 16.0 MB/16.0 MB of archives.
261s After this operation, 76.0 MB of additional disk space will be used.
261s Get:1 /tmp/autopkgtest.Sdp2gq/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [752 B]
262s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml.clib s390x 0.2.8-1build1 [142 kB]
262s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml all 0.17.21-1 [86.6 kB]
262s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x python3-msgpack s390x 1.0.3-3build2 [85.0 kB]
262s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cachecontrol all 0.14.0-1 [19.0 kB]
262s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mistune all 3.0.2-1 [32.8 kB]
262s Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mypy-extensions all 1.0.0-1 [6148 B]
262s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x python3-isodate all 0.6.1-2 [24.3 kB]
262s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x python3-rdflib all 6.1.1-3 [362 kB]
262s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x python3-filelock all 3.13.1-1 [10.8 kB]
262s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
262s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
262s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x python3-schema-salad s390x 8.5.20240102191335-1build1 [1053 kB]
262s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-upgrader all 1.2.11-1 [16.0 kB]
262s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 24.0-1 [41.1 kB]
262s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cwl-utils all 0.32-1 [118 kB]
262s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-utils all 0.32-1 [2824 B]
262s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x cwlformat all 2022.02.18-2 [7442 B]
262s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libcares2 s390x 1.27.0-1.0ubuntu1 [79.2 kB]
262s Get:20 http://ftpmaster.internal/ubuntu noble/universe s390x node-xtend all 4.0.2-3 [3902 B]
262s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x nodejs s390x 18.19.1+dfsg-6ubuntu5 [307 kB]
262s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x node-acorn all 8.8.1+ds+~cs25.17.7-2 [115 kB]
262s Get:23 http://ftpmaster.internal/ubuntu noble/universe s390x node-cjs-module-lexer all 1.2.3+dfsg-1 [32.1 kB]
262s Get:24 http://ftpmaster.internal/ubuntu noble/universe s390x node-busboy all 1.6.0+~cs2.6.0-2 [17.3 kB]
262s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x node-undici all 5.26.3+dfsg1+~cs23.10.12-2 [325 kB]
262s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libnode109 s390x 18.19.1+dfsg-6ubuntu5 [12.4 MB]
263s Get:27 http://ftpmaster.internal/ubuntu noble/universe s390x python3-execnet all 2.0.0-2 [33.6 kB]
263s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B]
263s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB]
263s Get:30 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB]
263s Get:31 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-mock all 3.12.0-1.1 [11.3 kB]
263s Get:32 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-xdist all 3.4.0-1 [32.0 kB]
263s Get:33 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mock all 5.1.0-1 [64.1 kB]
264s Fetched 16.0 MB in 2s (10.1 MB/s)
264s Selecting previously unselected package python3-ruamel.yaml.clib:s390x.
264s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 78322 files and directories currently installed.)
264s Preparing to unpack .../00-python3-ruamel.yaml.clib_0.2.8-1build1_s390x.deb ...
264s Unpacking python3-ruamel.yaml.clib:s390x (0.2.8-1build1) ...
264s Selecting previously unselected package python3-ruamel.yaml.
264s Preparing to unpack .../01-python3-ruamel.yaml_0.17.21-1_all.deb ...
264s Unpacking python3-ruamel.yaml (0.17.21-1) ...
264s Selecting previously unselected package python3-msgpack.
264s Preparing to unpack .../02-python3-msgpack_1.0.3-3build2_s390x.deb ...
264s Unpacking python3-msgpack (1.0.3-3build2) ...
264s Selecting previously unselected package python3-cachecontrol.
264s Preparing to unpack .../03-python3-cachecontrol_0.14.0-1_all.deb ...
264s Unpacking python3-cachecontrol (0.14.0-1) ...
264s Selecting previously unselected package python3-mistune.
264s Preparing to unpack .../04-python3-mistune_3.0.2-1_all.deb ...
264s Unpacking python3-mistune (3.0.2-1) ...
264s Selecting previously unselected package python3-mypy-extensions.
264s Preparing to unpack .../05-python3-mypy-extensions_1.0.0-1_all.deb ...
264s Unpacking python3-mypy-extensions (1.0.0-1) ...
264s Selecting previously unselected package python3-isodate.
264s Preparing to unpack .../06-python3-isodate_0.6.1-2_all.deb ...
264s Unpacking python3-isodate (0.6.1-2) ...
264s Selecting previously unselected package python3-rdflib.
264s Preparing to unpack .../07-python3-rdflib_6.1.1-3_all.deb ...
264s Unpacking python3-rdflib (6.1.1-3) ...
264s Selecting previously unselected package python3-filelock.
264s Preparing to unpack .../08-python3-filelock_3.13.1-1_all.deb ...
264s Unpacking python3-filelock (3.13.1-1) ...
264s Selecting previously unselected package fonts-glyphicons-halflings.
264s Preparing to unpack .../09-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
264s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
264s Selecting previously unselected package libjs-bootstrap.
264s Preparing to unpack .../10-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
264s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
264s Selecting previously unselected package python3-schema-salad.
264s Preparing to unpack .../11-python3-schema-salad_8.5.20240102191335-1build1_s390x.deb ...
264s Unpacking python3-schema-salad (8.5.20240102191335-1build1) ...
264s Selecting previously unselected package cwl-upgrader.
264s Preparing to unpack .../12-cwl-upgrader_1.2.11-1_all.deb ...
264s Unpacking cwl-upgrader (1.2.11-1) ...
264s Selecting previously unselected package python3-packaging.
264s Preparing to unpack .../13-python3-packaging_24.0-1_all.deb ...
264s Unpacking python3-packaging (24.0-1) ...
264s Selecting previously unselected package python3-cwl-utils.
264s Preparing to unpack .../14-python3-cwl-utils_0.32-1_all.deb ...
264s Unpacking python3-cwl-utils (0.32-1) ...
264s Selecting previously unselected package cwl-utils.
264s Preparing to unpack .../15-cwl-utils_0.32-1_all.deb ...
264s Unpacking cwl-utils (0.32-1) ...
265s Selecting previously unselected package cwlformat.
265s Preparing to unpack .../16-cwlformat_2022.02.18-2_all.deb ...
265s Unpacking cwlformat (2022.02.18-2) ...
265s Selecting previously unselected package libcares2:s390x.
265s Preparing to unpack .../17-libcares2_1.27.0-1.0ubuntu1_s390x.deb ...
265s Unpacking libcares2:s390x (1.27.0-1.0ubuntu1) ...
265s Selecting previously unselected package node-xtend.
265s Preparing to unpack .../18-node-xtend_4.0.2-3_all.deb ...
265s Unpacking node-xtend (4.0.2-3) ...
265s Selecting previously unselected package nodejs.
265s Preparing to unpack .../19-nodejs_18.19.1+dfsg-6ubuntu5_s390x.deb ...
265s Unpacking nodejs (18.19.1+dfsg-6ubuntu5) ...
265s Selecting previously unselected package node-acorn.
265s Preparing to unpack .../20-node-acorn_8.8.1+ds+~cs25.17.7-2_all.deb ...
265s Unpacking node-acorn (8.8.1+ds+~cs25.17.7-2) ...
265s Selecting previously unselected package node-cjs-module-lexer.
265s Preparing to unpack .../21-node-cjs-module-lexer_1.2.3+dfsg-1_all.deb ...
265s Unpacking node-cjs-module-lexer (1.2.3+dfsg-1) ...
265s Selecting previously unselected package node-busboy.
265s Preparing to unpack .../22-node-busboy_1.6.0+~cs2.6.0-2_all.deb ...
265s Unpacking node-busboy (1.6.0+~cs2.6.0-2) ...
265s Selecting previously unselected package node-undici.
265s Preparing to unpack .../23-node-undici_5.26.3+dfsg1+~cs23.10.12-2_all.deb ...
265s Unpacking node-undici (5.26.3+dfsg1+~cs23.10.12-2) ...
265s Selecting previously unselected package libnode109:s390x.
265s Preparing to unpack .../24-libnode109_18.19.1+dfsg-6ubuntu5_s390x.deb ...
265s Unpacking libnode109:s390x (18.19.1+dfsg-6ubuntu5) ...
266s Selecting previously unselected package python3-execnet.
266s Preparing to unpack .../25-python3-execnet_2.0.0-2_all.deb ...
266s Unpacking python3-execnet (2.0.0-2) ...
266s Selecting previously unselected package python3-iniconfig.
266s Preparing to unpack .../26-python3-iniconfig_1.1.1-2_all.deb ...
266s Unpacking python3-iniconfig (1.1.1-2) ...
266s Selecting previously unselected package python3-pluggy.
266s Preparing to unpack .../27-python3-pluggy_1.4.0-1_all.deb ...
266s Unpacking python3-pluggy (1.4.0-1) ...
266s Selecting previously unselected package python3-pytest.
266s Preparing to unpack .../28-python3-pytest_7.4.4-1_all.deb ...
266s Unpacking python3-pytest (7.4.4-1) ...
266s Selecting previously unselected package python3-pytest-mock.
266s Preparing to unpack .../29-python3-pytest-mock_3.12.0-1.1_all.deb ...
266s Unpacking python3-pytest-mock (3.12.0-1.1) ...
266s Selecting previously unselected package python3-pytest-xdist.
266s Preparing to unpack .../30-python3-pytest-xdist_3.4.0-1_all.deb ...
266s Unpacking python3-pytest-xdist (3.4.0-1) ...
266s Selecting previously unselected package python3-mock.
266s Preparing to unpack .../31-python3-mock_5.1.0-1_all.deb ...
266s Unpacking python3-mock (5.1.0-1) ...
266s Selecting previously unselected package autopkgtest-satdep.
266s Preparing to unpack .../32-1-autopkgtest-satdep.deb ...
266s Unpacking autopkgtest-satdep (0) ...
266s Setting up python3-iniconfig (1.1.1-2) ...
266s Setting up python3-filelock (3.13.1-1) ...
266s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
266s Setting up python3-mypy-extensions (1.0.0-1) ...
266s Setting up python3-ruamel.yaml.clib:s390x (0.2.8-1build1) ...
266s Setting up node-cjs-module-lexer (1.2.3+dfsg-1) ...
266s Setting up python3-mock (5.1.0-1) ...
267s Setting up python3-isodate (0.6.1-2) ...
267s Setting up python3-packaging (24.0-1) ...
267s Setting up libcares2:s390x (1.27.0-1.0ubuntu1) ...
267s Setting up python3-pluggy (1.4.0-1) ...
267s Setting up python3-ruamel.yaml (0.17.21-1) ...
268s Setting up python3-rdflib (6.1.1-3) ...
268s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:75: SyntaxWarning: invalid escape sequence '\*'
268s   """Converts the given graph into a networkx.MultiDiGraph.
268s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:132: SyntaxWarning: invalid escape sequence '\*'
268s   """Converts the given graph into a networkx.DiGraph.
268s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:195: SyntaxWarning: invalid escape sequence '\*'
268s   """Converts the given graph into a networkx.Graph.
268s Setting up python3-msgpack (1.0.3-3build2) ...
268s Setting up python3-cachecontrol (0.14.0-1) ...
268s Setting up node-xtend (4.0.2-3) ...
268s Setting up python3-execnet (2.0.0-2) ...
269s Setting up python3-mistune (3.0.2-1) ...
269s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
269s Setting up node-busboy (1.6.0+~cs2.6.0-2) ...
269s Setting up python3-pytest (7.4.4-1) ...
269s Setting up python3-schema-salad (8.5.20240102191335-1build1) ...
270s Setting up cwlformat (2022.02.18-2) ...
270s Setting up cwl-upgrader (1.2.11-1) ...
270s Setting up node-undici (5.26.3+dfsg1+~cs23.10.12-2) ...
270s Setting up python3-pytest-mock (3.12.0-1.1) ...
270s Setting up python3-pytest-xdist (3.4.0-1) ...
271s Setting up python3-cwl-utils (0.32-1) ...
272s Setting up cwl-utils (0.32-1) ...
272s Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ...
272s Setting up libnode109:s390x (18.19.1+dfsg-6ubuntu5) ...
272s Setting up nodejs (18.19.1+dfsg-6ubuntu5) ...
272s update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode
272s Setting up autopkgtest-satdep (0) ...
272s Processing triggers for libc-bin (2.39-0ubuntu8) ...
272s Processing triggers for man-db (2.12.0-4build2) ...
276s (Reading database ... 80202 files and directories currently installed.)
276s Removing autopkgtest-satdep (0) ...
277s autopkgtest [02:07:05]: test run-tests: [-----------------------
277s + pkg=cwl-utils
277s + [ /tmp/autopkgtest.Sdp2gq/autopkgtest_tmp =  ]
277s + cd /tmp/autopkgtest.Sdp2gq/autopkgtest_tmp
277s + py.test-3 -rs --numprocesses=auto --pyargs cwl_utils
278s ============================= test session starts ==============================
278s platform linux -- Python 3.12.3, pytest-7.4.4, pluggy-1.4.0
278s rootdir: /tmp/autopkgtest.Sdp2gq/autopkgtest_tmp
278s plugins: xdist-3.4.0, mock-3.12.0
278s created: 1/1 worker
278s 1 worker [184 items]
278s 
283s ..sssssssssssssss............................................ssss....... [ 39%]
294s ........................................................................ [ 78%]
295s ........................................                                 [100%]
295s =============================== warnings summary ===============================
295s ../../../usr/lib/python3/dist-packages/cwl_utils/tests/util.py:6
295s   /usr/lib/python3/dist-packages/cwl_utils/tests/util.py:6: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
295s     from pkg_resources import Requirement, ResolutionError, resource_filename
295s 
295s ../../../usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871
295s   /usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('ruamel')`.
295s   Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages
295s     declare_namespace(pkg)
295s 
295s ../../../usr/lib/python3/dist-packages/cwlformat/formatter.py:23
295s   /usr/lib/python3/dist-packages/cwlformat/formatter.py:23: DeprecationWarning: read_text is deprecated. Use files() instead. Refer to https://importlib-resources.readthedocs.io/en/latest/using.html#migrating-from-legacy for migration advice.
295s     key_order_dict = yaml.load(read_text("cwlformat", "keyorder.yml"))
295s 
295s ../../../usr/lib/python3.12/importlib/resources/_legacy.py:79
295s   /usr/lib/python3.12/importlib/resources/_legacy.py:79: DeprecationWarning: open_text is deprecated. Use files() instead. Refer to https://importlib-resources.readthedocs.io/en/latest/using.html#migrating-from-legacy for migration advice.
295s     with open_text(package, resource, encoding, errors) as fp:
295s 
295s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
295s =========================== short test summary info ============================
295s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the docker executable on the system path.
295s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the podman executable on the system path.
295s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the singularity executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the docker executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the podman executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the singularity executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the docker executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the podman executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the singularity executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the docker executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the podman executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the singularity executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:78: Requires the podman executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:104: Requires the udocker executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:130: Requires the singularity executable on the system path.
295s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:156: Requires the singularity executable on the system path.
295s ================= 165 passed, 19 skipped, 4 warnings in 17.25s =================
295s autopkgtest [02:07:23]: test run-tests: -----------------------]
295s autopkgtest [02:07:23]: test run-tests:  - - - - - - - - - - results - - - - - - - - - -
295s run-tests            PASS
296s autopkgtest [02:07:24]: test command1: preparing testbed
538s autopkgtest [02:11:26]: testbed dpkg architecture: s390x
538s autopkgtest [02:11:26]: testbed apt version: 2.7.14build2
538s autopkgtest [02:11:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup
539s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB]
539s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [338 kB]
539s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB]
539s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B]
539s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [53.4 kB]
539s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [93.9 kB]
539s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B]
539s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [976 B]
539s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B]
539s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [427 kB]
540s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B]
540s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B]
541s Fetched 1055 kB in 1s (1050 kB/s)
541s Reading package lists...
542s sh: 4: dhclient: not found
543s Reading package lists...
544s Building dependency tree...
544s Reading state information...
544s Calculating upgrade...
544s The following packages will be upgraded:
544s   apport apport-core-dump-handler libkeyutils1 libnetplan1 libnuma1 make
544s   man-db netcat-openbsd netplan-generator netplan.io numactl python3-apport
544s   python3-netplan python3-problem-report
544s 14 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
544s Need to get 2057 kB of archives.
544s After this operation, 1024 B of additional disk space will be used.
544s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB]
544s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x python3-apport all 2.28.1-0ubuntu1 [92.1 kB]
544s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB]
544s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x apport all 2.28.1-0ubuntu1 [83.5 kB]
544s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libkeyutils1 s390x 1.6.3-3build1 [9556 B]
544s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x netplan-generator s390x 1.0-2ubuntu1 [59.2 kB]
544s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x python3-netplan s390x 1.0-2ubuntu1 [23.0 kB]
544s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x netplan.io s390x 1.0-2ubuntu1 [65.8 kB]
544s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x libnetplan1 s390x 1.0-2ubuntu1 [126 kB]
544s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x netcat-openbsd s390x 1.226-1ubuntu2 [44.0 kB]
544s Get:11 http://ftpmaster.internal/ubuntu noble/main s390x libnuma1 s390x 2.0.18-1build1 [25.1 kB]
544s Get:12 http://ftpmaster.internal/ubuntu noble/main s390x man-db s390x 2.12.0-4build2 [1253 kB]
545s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x make s390x 4.3-4.1build2 [196 kB]
545s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x numactl s390x 2.0.18-1build1 [40.0 kB]
545s Preconfiguring packages ...
545s Fetched 2057 kB in 1s (2690 kB/s)
545s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 100%
(Reading database ... 78323 files and directories currently installed.)
545s Preparing to unpack .../00-python3-problem-report_2.28.1-0ubuntu1_all.deb ...
545s Unpacking python3-problem-report (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
545s Preparing to unpack .../01-python3-apport_2.28.1-0ubuntu1_all.deb ...
545s Unpacking python3-apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
545s Preparing to unpack .../02-apport-core-dump-handler_2.28.1-0ubuntu1_all.deb ...
545s Unpacking apport-core-dump-handler (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
545s Preparing to unpack .../03-apport_2.28.1-0ubuntu1_all.deb ...
545s Unpacking apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ...
545s Preparing to unpack .../04-libkeyutils1_1.6.3-3build1_s390x.deb ...
545s Unpacking libkeyutils1:s390x (1.6.3-3build1) over (1.6.3-3) ...
545s Preparing to unpack .../05-netplan-generator_1.0-2ubuntu1_s390x.deb ...
545s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
545s Unpacking netplan-generator (1.0-2ubuntu1) over (1.0-2build1) ...
546s Preparing to unpack .../06-python3-netplan_1.0-2ubuntu1_s390x.deb ...
546s Unpacking python3-netplan (1.0-2ubuntu1) over (1.0-2build1) ...
546s Preparing to unpack .../07-netplan.io_1.0-2ubuntu1_s390x.deb ...
546s Unpacking netplan.io (1.0-2ubuntu1) over (1.0-2build1) ...
546s Preparing to unpack .../08-libnetplan1_1.0-2ubuntu1_s390x.deb ...
546s Unpacking libnetplan1:s390x (1.0-2ubuntu1) over (1.0-2build1) ...
546s Preparing to unpack .../09-netcat-openbsd_1.226-1ubuntu2_s390x.deb ...
546s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ...
546s Preparing to unpack .../10-libnuma1_2.0.18-1build1_s390x.deb ...
546s Unpacking libnuma1:s390x (2.0.18-1build1) over (2.0.18-1) ...
546s Preparing to unpack .../11-man-db_2.12.0-4build2_s390x.deb ...
546s Unpacking man-db (2.12.0-4build2) over (2.12.0-4build1) ...
546s Preparing to unpack .../12-make_4.3-4.1build2_s390x.deb ...
546s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ...
546s Preparing to unpack .../13-numactl_2.0.18-1build1_s390x.deb ...
546s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ...
546s Setting up libkeyutils1:s390x (1.6.3-3build1) ...
546s Setting up python3-problem-report (2.28.1-0ubuntu1) ...
546s Setting up netcat-openbsd (1.226-1ubuntu2) ...
546s Setting up libnetplan1:s390x (1.0-2ubuntu1) ...
546s Setting up man-db (2.12.0-4build2) ...
546s Updating database of manual pages ...
548s man-db.service is a disabled or a static unit not running, not starting it.
548s Setting up python3-apport (2.28.1-0ubuntu1) ...
548s Setting up make (4.3-4.1build2) ...
548s Setting up libnuma1:s390x (2.0.18-1build1) ...
548s Setting up python3-netplan (1.0-2ubuntu1) ...
548s Setting up netplan-generator (1.0-2ubuntu1) ...
548s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator'
548s Setting up numactl (2.0.18-1build1) ...
548s Setting up netplan.io (1.0-2ubuntu1) ...
548s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ...
549s Setting up apport (2.28.1-0ubuntu1) ...
549s Installing new version of config file /etc/apport/crashdb.conf ...
550s apport-autoreport.service is a disabled or a static unit not running, not starting it.
550s Processing triggers for dbus (1.14.10-4ubuntu4) ...
550s Processing triggers for libc-bin (2.39-0ubuntu8) ...
550s Reading package lists...
550s Building dependency tree...
550s Reading state information...
551s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
551s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease
551s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease
551s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease
551s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease
552s Reading package lists...
553s Reading package lists...
553s Building dependency tree...
553s Reading state information...
553s Calculating upgrade...
553s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
553s Reading package lists...
553s Building dependency tree...
553s Reading state information...
554s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
554s autopkgtest [02:11:42]: rebooting testbed after setup commands that affected boot
601s Reading package lists...
602s Building dependency tree...
602s Reading state information...
602s Starting pkgProblemResolver with broken count: 0
602s Starting 2 pkgProblemResolver with broken count: 0
602s Done
602s The following additional packages will be installed:
602s   cwl-upgrader cwl-utils fonts-glyphicons-halflings libjs-bootstrap
602s   python3-cachecontrol python3-cwl-utils python3-filelock python3-isodate
602s   python3-mistune python3-msgpack python3-mypy-extensions python3-packaging
602s   python3-rdflib python3-ruamel.yaml python3-ruamel.yaml.clib
602s   python3-schema-salad
602s Suggested packages:
602s   cwltool cwlformat python-rdflib-doc
602s Recommended packages:
602s   python3-sparqlwrapper python3-html5lib cwltool black
602s The following NEW packages will be installed:
602s   autopkgtest-satdep cwl-upgrader cwl-utils fonts-glyphicons-halflings
602s   libjs-bootstrap python3-cachecontrol python3-cwl-utils python3-filelock
602s   python3-isodate python3-mistune python3-msgpack python3-mypy-extensions
602s   python3-packaging python3-rdflib python3-ruamel.yaml
602s   python3-ruamel.yaml.clib python3-schema-salad
602s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded.
602s Need to get 2247 kB/2248 kB of archives.
602s After this operation, 15.6 MB of additional disk space will be used.
602s Get:1 /tmp/autopkgtest.Sdp2gq/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [712 B]
602s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml.clib s390x 0.2.8-1build1 [142 kB]
603s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml all 0.17.21-1 [86.6 kB]
603s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x python3-msgpack s390x 1.0.3-3build2 [85.0 kB]
603s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cachecontrol all 0.14.0-1 [19.0 kB]
603s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mistune all 3.0.2-1 [32.8 kB]
603s Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mypy-extensions all 1.0.0-1 [6148 B]
603s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x python3-isodate all 0.6.1-2 [24.3 kB]
603s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x python3-rdflib all 6.1.1-3 [362 kB]
603s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x python3-filelock all 3.13.1-1 [10.8 kB]
603s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
603s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
603s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x python3-schema-salad s390x 8.5.20240102191335-1build1 [1053 kB]
603s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-upgrader all 1.2.11-1 [16.0 kB]
603s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 24.0-1 [41.1 kB]
603s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cwl-utils all 0.32-1 [118 kB]
603s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-utils all 0.32-1 [2824 B]
603s Fetched 2247 kB in 1s (2729 kB/s)
604s Selecting previously unselected package python3-ruamel.yaml.clib:s390x.
604s (Reading database ... 
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604s Preparing to unpack .../00-python3-ruamel.yaml.clib_0.2.8-1build1_s390x.deb ...
604s Unpacking python3-ruamel.yaml.clib:s390x (0.2.8-1build1) ...
604s Selecting previously unselected package python3-ruamel.yaml.
604s Preparing to unpack .../01-python3-ruamel.yaml_0.17.21-1_all.deb ...
604s Unpacking python3-ruamel.yaml (0.17.21-1) ...
604s Selecting previously unselected package python3-msgpack.
604s Preparing to unpack .../02-python3-msgpack_1.0.3-3build2_s390x.deb ...
604s Unpacking python3-msgpack (1.0.3-3build2) ...
604s Selecting previously unselected package python3-cachecontrol.
604s Preparing to unpack .../03-python3-cachecontrol_0.14.0-1_all.deb ...
604s Unpacking python3-cachecontrol (0.14.0-1) ...
604s Selecting previously unselected package python3-mistune.
604s Preparing to unpack .../04-python3-mistune_3.0.2-1_all.deb ...
604s Unpacking python3-mistune (3.0.2-1) ...
604s Selecting previously unselected package python3-mypy-extensions.
604s Preparing to unpack .../05-python3-mypy-extensions_1.0.0-1_all.deb ...
604s Unpacking python3-mypy-extensions (1.0.0-1) ...
604s Selecting previously unselected package python3-isodate.
604s Preparing to unpack .../06-python3-isodate_0.6.1-2_all.deb ...
604s Unpacking python3-isodate (0.6.1-2) ...
604s Selecting previously unselected package python3-rdflib.
604s Preparing to unpack .../07-python3-rdflib_6.1.1-3_all.deb ...
604s Unpacking python3-rdflib (6.1.1-3) ...
604s Selecting previously unselected package python3-filelock.
604s Preparing to unpack .../08-python3-filelock_3.13.1-1_all.deb ...
604s Unpacking python3-filelock (3.13.1-1) ...
604s Selecting previously unselected package fonts-glyphicons-halflings.
604s Preparing to unpack .../09-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
604s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
604s Selecting previously unselected package libjs-bootstrap.
604s Preparing to unpack .../10-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
604s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
604s Selecting previously unselected package python3-schema-salad.
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604s Unpacking python3-schema-salad (8.5.20240102191335-1build1) ...
604s Selecting previously unselected package cwl-upgrader.
604s Preparing to unpack .../12-cwl-upgrader_1.2.11-1_all.deb ...
604s Unpacking cwl-upgrader (1.2.11-1) ...
604s Selecting previously unselected package python3-packaging.
604s Preparing to unpack .../13-python3-packaging_24.0-1_all.deb ...
604s Unpacking python3-packaging (24.0-1) ...
604s Selecting previously unselected package python3-cwl-utils.
604s Preparing to unpack .../14-python3-cwl-utils_0.32-1_all.deb ...
604s Unpacking python3-cwl-utils (0.32-1) ...
604s Selecting previously unselected package cwl-utils.
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604s Selecting previously unselected package autopkgtest-satdep.
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604s Unpacking autopkgtest-satdep (0) ...
604s Setting up python3-filelock (3.13.1-1) ...
604s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
604s Setting up python3-mypy-extensions (1.0.0-1) ...
605s Setting up python3-ruamel.yaml.clib:s390x (0.2.8-1build1) ...
605s Setting up python3-isodate (0.6.1-2) ...
605s Setting up python3-packaging (24.0-1) ...
605s Setting up python3-ruamel.yaml (0.17.21-1) ...
605s Setting up python3-rdflib (6.1.1-3) ...
605s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:75: SyntaxWarning: invalid escape sequence '\*'
605s   """Converts the given graph into a networkx.MultiDiGraph.
605s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:132: SyntaxWarning: invalid escape sequence '\*'
605s   """Converts the given graph into a networkx.DiGraph.
605s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:195: SyntaxWarning: invalid escape sequence '\*'
605s   """Converts the given graph into a networkx.Graph.
606s Setting up python3-msgpack (1.0.3-3build2) ...
606s Setting up python3-cachecontrol (0.14.0-1) ...
606s Setting up python3-mistune (3.0.2-1) ...
606s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
606s Setting up python3-schema-salad (8.5.20240102191335-1build1) ...
607s Setting up cwl-upgrader (1.2.11-1) ...
607s Setting up python3-cwl-utils (0.32-1) ...
608s Setting up cwl-utils (0.32-1) ...
608s Setting up autopkgtest-satdep (0) ...
608s Processing triggers for man-db (2.12.0-4build2) ...
611s (Reading database ... 79382 files and directories currently installed.)
611s Removing autopkgtest-satdep (0) ...
613s autopkgtest [02:12:41]: test command1: cwl-cite-extract --help && cwl-docker-extract --help && cwl-expression-refactor --help && cwl-normalizer --help
613s autopkgtest [02:12:41]: test command1: [-----------------------
613s usage: cwl-cite-extract [-h] input
613s 
613s Print information about software used in a CWL document (Workflow or
613s CommandLineTool). For CWL Workflows, all steps will also be searched
613s (recursively).
613s 
613s positional arguments:
613s   input       Input CWL document (CWL Workflow or CWL CommandLineTool)
613s 
613s options:
613s   -h, --help  show this help message and exit
614s usage: cwl-docker-extract [-h] [--dir DIR] [-s]
614s                           [--container-engine CONTAINER_ENGINE]
614s                           [--force-download]
614s                           input
614s 
614s Save container images specified in a CWL document (Workflow or
614s CommandLineTool). For CWL Workflows, all steps will also be searched
614s (recursively).
614s 
614s positional arguments:
614s   input                 Input CWL document (CWL Workflow or CWL
614s                         CommandLineTool)
614s 
614s options:
614s   -h, --help            show this help message and exit
614s   --dir DIR             Directory in which to save images
614s   -s, --singularity     Use singularity to pull the image
614s   --container-engine CONTAINER_ENGINE
614s                         Specify which command to use to run OCI containers.
614s                         Defaults to 'docker' (or 'singularity' if
614s                         --singularity/-s is passed).
614s   --force-download      Force pulling a newer container.
614s usage: cwl-expression-refactor [-h] [--etools] [--skip-some1] [--skip-some2]
614s                                dir inputs [inputs ...]
614s 
614s Tool to refactor CWL documents so that any CWL expression are separate steps
614s as either ExpressionTools or CommandLineTools. Exit code 7 means a single CWL
614s document was provided but it did not need modification.
614s 
614s positional arguments:
614s   dir           Directory in which to save converted files
614s   inputs        One or more CWL documents.
614s 
614s options:
614s   -h, --help    show this help message and exit
614s   --etools      Output ExpressionTools, don't go all the way to
614s                 CommandLineTools.
614s   --skip-some1  Don't process CommandLineTool.inputs.inputBinding and
614s                 CommandLineTool.arguments sections.
614s   --skip-some2  Don't process CommandLineTool.outputEval or
614s                 CommandLineTool.requirements.InitialWorkDirRequirement.
614s usage: cwl-normalizer [-h] [--etools] [--skip-some1] [--skip-some2]
614s                       [--no-expression-refactoring]
614s                       dir inputs [inputs ...]
614s 
614s Normalizes CWL documents. Will upgrade to CWL v1.2, and pack the result. Can
614s optionally refactor out CWL expressions.
614s 
614s positional arguments:
614s   dir                   Directory in which to save converted files
614s   inputs                One or more CWL documents.
614s 
614s options:
614s   -h, --help            show this help message and exit
614s   --etools              Output ExpressionTools, don't go all the way to
614s                         CommandLineTools.
614s   --skip-some1          Don't process CommandLineTool.inputs.inputBinding and
614s                         CommandLineTool.arguments sections.
614s   --skip-some2          Don't process CommandLineTool.outputEval or CommandLin
614s                         eTool.requirements.InitialWorkDirRequirement.
614s   --no-expression-refactoring
614s                         Don't do any CWL expression refactoring.
615s autopkgtest [02:12:43]: test command1: -----------------------]
615s command1             PASS (superficial)
615s autopkgtest [02:12:43]: test command1:  - - - - - - - - - - results - - - - - - - - - -
616s autopkgtest [02:12:44]: test command2: preparing testbed
617s Reading package lists...
617s Building dependency tree...
617s Reading state information...
617s Starting pkgProblemResolver with broken count: 0
618s Starting 2 pkgProblemResolver with broken count: 0
618s Done
618s The following additional packages will be installed:
618s   cwlformat
618s The following NEW packages will be installed:
618s   autopkgtest-satdep cwlformat
618s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
618s Need to get 7442 B/8158 B of archives.
618s After this operation, 39.9 kB of additional disk space will be used.
618s Get:1 /tmp/autopkgtest.Sdp2gq/3-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B]
618s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x cwlformat all 2022.02.18-2 [7442 B]
618s Fetched 7442 B in 0s (44.7 kB/s)
619s Selecting previously unselected package cwlformat.
619s (Reading database ... 
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619s Preparing to unpack .../cwlformat_2022.02.18-2_all.deb ...
619s Unpacking cwlformat (2022.02.18-2) ...
619s Selecting previously unselected package autopkgtest-satdep.
619s Preparing to unpack .../3-autopkgtest-satdep.deb ...
619s Unpacking autopkgtest-satdep (0) ...
619s Setting up cwlformat (2022.02.18-2) ...
619s Setting up autopkgtest-satdep (0) ...
621s (Reading database ... 79400 files and directories currently installed.)
621s Removing autopkgtest-satdep (0) ...
622s autopkgtest [02:12:50]: test command2: cwl-graph-split --help
622s autopkgtest [02:12:50]: test command2: [-----------------------
622s usage: cwl-graph-split [-h] [-m MAINFILE] [-f {json,yaml}] [-p] [-C OUTDIR]
622s                        cwlfile
622s 
622s Split a packed CWL document.
622s 
622s positional arguments:
622s   cwlfile
622s 
622s options:
622s   -h, --help            show this help message and exit
622s   -m MAINFILE, --mainfile MAINFILE
622s                         Specify the name of the main document.
622s   -f {json,yaml}, --output-format {json,yaml}
622s                         Specify the format of the output CWL files.
622s   -p, --pretty          Beautify the output CWL document, only works with yaml
622s                         format.
622s   -C OUTDIR, --outdir OUTDIR
622s                         Output folder for the unpacked CWL files.
623s autopkgtest [02:12:51]: test command2: -----------------------]
623s command2             PASS (superficial)
623s autopkgtest [02:12:51]: test command2:  - - - - - - - - - - results - - - - - - - - - -
623s autopkgtest [02:12:51]: @@@@@@@@@@@@@@@@@@@@ summary
623s run-tests            PASS
623s command1             PASS (superficial)
623s command2             PASS (superficial)
646s Creating nova instance adt-noble-s390x-cwl-utils-20240419-020228-juju-7f2275-prod-proposed-migration-environment-3-aa97ea07-54fc-478c-915d-477277f75040 from image adt/ubuntu-noble-s390x-server-20240418.img (UUID 85e53509-ea4e-4742-afdb-a30c7e328507)...
646s Creating nova instance adt-noble-s390x-cwl-utils-20240419-020228-juju-7f2275-prod-proposed-migration-environment-3-aa97ea07-54fc-478c-915d-477277f75040 from image adt/ubuntu-noble-s390x-server-20240418.img (UUID 85e53509-ea4e-4742-afdb-a30c7e328507)...