0s autopkgtest [22:15:02]: starting date and time: 2024-03-20 22:15:02+0000 0s autopkgtest [22:15:02]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [22:15:02]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.h169merv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:pytest --apt-upgrade cwl-utils --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=pytest/8.0.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-s390x-15.secgroup --name adt-noble-s390x-cwl-utils-20240320-221502-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 131s autopkgtest [22:17:13]: testbed dpkg architecture: s390x 131s autopkgtest [22:17:13]: testbed apt version: 2.7.12 131s autopkgtest [22:17:13]: @@@@@@@@@@@@@@@@@@@@ test bed setup 131s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 132s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3811 kB] 132s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 132s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [500 kB] 132s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 132s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [678 kB] 132s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 132s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 132s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 132s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4061 kB] 132s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 132s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.3 kB] 132s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 134s Fetched 9285 kB in 2s (3753 kB/s) 135s Reading package lists... 138s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s Calculating upgrade... 138s The following packages will be upgraded: 138s ubuntu-minimal ubuntu-standard 139s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 139s Need to get 21.5 kB of archives. 139s After this operation, 0 B of additional disk space will be used. 139s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536build1 [10.7 kB] 139s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536build1 [10.7 kB] 139s Fetched 21.5 kB in 0s (92.6 kB/s) 139s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 139s Preparing to unpack .../ubuntu-minimal_1.536build1_s390x.deb ... 139s Unpacking ubuntu-minimal (1.536build1) over (1.536) ... 139s Preparing to unpack .../ubuntu-standard_1.536build1_s390x.deb ... 139s Unpacking ubuntu-standard (1.536build1) over (1.536) ... 139s Setting up ubuntu-minimal (1.536build1) ... 139s Setting up ubuntu-standard (1.536build1) ... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 141s Unknown architecture, assuming PC-style ttyS0 141s sh: Attempting to set up Debian/Ubuntu apt sources automatically 141s sh: Distribution appears to be Ubuntu 141s Reading package lists... 142s Building dependency tree... 142s Reading state information... 142s eatmydata is already the newest version (131-1). 142s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 142s Reading package lists... 142s Building dependency tree... 142s Reading state information... 142s dbus is already the newest version (1.14.10-4ubuntu1). 142s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s rng-tools-debian is already the newest version (2.4). 143s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 144s The following packages will be REMOVED: 144s cloud-init* python3-configobj* python3-debconf* 144s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 144s After this operation, 3252 kB disk space will be freed. 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 144s Removing cloud-init (24.1.1-0ubuntu1) ... 144s Removing python3-configobj (5.0.8-3) ... 144s Removing python3-debconf (1.5.86) ... 144s Processing triggers for man-db (2.12.0-3) ... 145s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51389 files and directories currently installed.) 145s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 146s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 146s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 146s invoke-rc.d: policy-rc.d denied execution of try-restart. 146s Reading package lists... 146s Building dependency tree... 146s Reading state information... 146s linux-generic is already the newest version (6.8.0-11.11+1). 146s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 147s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 147s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 147s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 149s Reading package lists... 150s Reading package lists... 150s Building dependency tree... 150s Reading state information... 150s Calculating upgrade... 150s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s Reading package lists... 151s Building dependency tree... 151s Reading state information... 151s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 151s autopkgtest [22:17:33]: rebooting testbed after setup commands that affected boot 170s autopkgtest [22:17:52]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 173s autopkgtest [22:17:55]: @@@@@@@@@@@@@@@@@@@@ apt-source cwl-utils 175s Get:1 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (dsc) [2459 B] 175s Get:2 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (tar) [304 kB] 175s Get:3 http://ftpmaster.internal/ubuntu noble/universe cwl-utils 0.32-1 (diff) [3584 B] 175s gpgv: Signature made Tue Jan 23 11:29:08 2024 UTC 175s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 175s gpgv: Can't check signature: No public key 175s dpkg-source: warning: cannot verify inline signature for ./cwl-utils_0.32-1.dsc: no acceptable signature found 176s autopkgtest [22:17:58]: testing package cwl-utils version 0.32-1 176s autopkgtest [22:17:58]: build not needed 176s autopkgtest [22:17:58]: test run-tests: preparing testbed 178s Reading package lists... 178s Building dependency tree... 178s Reading state information... 178s Starting pkgProblemResolver with broken count: 0 178s Starting 2 pkgProblemResolver with broken count: 0 178s Done 178s The following additional packages will be installed: 178s cwl-upgrader cwl-utils cwlformat fonts-glyphicons-halflings libc-ares2 178s libjs-bootstrap libnode108 node-acorn node-busboy node-cjs-module-lexer 178s node-undici node-xtend nodejs python3-cachecontrol python3-cwl-utils 178s python3-execnet python3-filelock python3-iniconfig python3-isodate 178s python3-mistune python3-mock python3-msgpack python3-mypy-extensions 178s python3-packaging python3-pluggy python3-pytest python3-pytest-mock 178s python3-pytest-xdist python3-rdflib python3-ruamel.yaml 178s python3-ruamel.yaml.clib python3-schema-salad 178s Suggested packages: 178s cwltool npm execnet-doc python-mock-doc python-pytest-mock-doc 178s python-rdflib-doc 178s Recommended packages: 178s nodejs-doc python3-sparqlwrapper python3-html5lib cwltool black 179s The following NEW packages will be installed: 179s autopkgtest-satdep cwl-upgrader cwl-utils cwlformat 179s fonts-glyphicons-halflings libc-ares2 libjs-bootstrap libnode108 node-acorn 179s node-busboy node-cjs-module-lexer node-undici node-xtend nodejs 179s python3-cachecontrol python3-cwl-utils python3-execnet python3-filelock 179s python3-iniconfig python3-isodate python3-mistune python3-mock 179s python3-msgpack python3-mypy-extensions python3-packaging python3-pluggy 179s python3-pytest python3-pytest-mock python3-pytest-xdist python3-rdflib 179s python3-ruamel.yaml python3-ruamel.yaml.clib python3-schema-salad 179s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. 179s Need to get 16.6 MB/16.6 MB of archives. 179s After this operation, 78.8 MB of additional disk space will be used. 179s Get:1 /tmp/autopkgtest.GuqfE8/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [748 B] 179s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml.clib s390x 0.2.8-1 [218 kB] 179s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml all 0.17.21-1 [86.6 kB] 179s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x python3-msgpack s390x 1.0.3-3build1 [101 kB] 179s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cachecontrol all 0.14.0-1 [19.0 kB] 179s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mistune all 3.0.2-1 [32.8 kB] 179s Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mypy-extensions all 1.0.0-1 [6148 B] 179s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x python3-isodate all 0.6.1-2 [24.3 kB] 179s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x python3-rdflib all 6.1.1-3 [362 kB] 179s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x python3-filelock all 3.13.1-1 [10.8 kB] 179s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 179s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 179s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x python3-schema-salad s390x 8.5.20240102191335-1 [1626 kB] 179s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-upgrader all 1.2.11-1 [16.0 kB] 179s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 179s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cwl-utils all 0.32-1 [118 kB] 179s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-utils all 0.32-1 [2824 B] 179s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x cwlformat all 2022.02.18-2 [7442 B] 179s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libc-ares2 s390x 1.27.0-1 [79.2 kB] 179s Get:20 http://ftpmaster.internal/ubuntu noble/universe s390x node-xtend all 4.0.2-3 [3902 B] 179s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x nodejs s390x 18.19.1+dfsg-2ubuntu4 [307 kB] 179s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x node-acorn all 8.8.1+ds+~cs25.17.7-2 [115 kB] 179s Get:23 http://ftpmaster.internal/ubuntu noble/universe s390x node-cjs-module-lexer all 1.2.3+dfsg-1 [32.1 kB] 179s Get:24 http://ftpmaster.internal/ubuntu noble/universe s390x node-busboy all 1.6.0+~cs2.6.0-2 [17.3 kB] 179s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x node-undici all 5.26.3+dfsg1+~cs23.10.12-2 [325 kB] 179s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x libnode108 s390x 18.19.1+dfsg-2ubuntu4 [12.4 MB] 180s Get:27 http://ftpmaster.internal/ubuntu noble/universe s390x python3-execnet all 2.0.0-2 [33.6 kB] 180s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 180s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] 180s Get:30 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB] 180s Get:31 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-mock all 3.12.0-1.1 [11.3 kB] 180s Get:32 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-xdist all 3.4.0-1 [32.0 kB] 180s Get:33 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mock all 5.1.0-1 [64.1 kB] 180s Fetched 16.6 MB in 1s (13.1 MB/s) 180s Selecting previously unselected package python3-ruamel.yaml.clib:s390x. 180s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51332 files and directories currently installed.) 180s Preparing to unpack .../00-python3-ruamel.yaml.clib_0.2.8-1_s390x.deb ... 180s Unpacking python3-ruamel.yaml.clib:s390x (0.2.8-1) ... 180s Selecting previously unselected package python3-ruamel.yaml. 180s Preparing to unpack .../01-python3-ruamel.yaml_0.17.21-1_all.deb ... 180s Unpacking python3-ruamel.yaml (0.17.21-1) ... 180s Selecting previously unselected package python3-msgpack. 180s Preparing to unpack .../02-python3-msgpack_1.0.3-3build1_s390x.deb ... 180s Unpacking python3-msgpack (1.0.3-3build1) ... 180s Selecting previously unselected package python3-cachecontrol. 180s Preparing to unpack .../03-python3-cachecontrol_0.14.0-1_all.deb ... 180s Unpacking python3-cachecontrol (0.14.0-1) ... 180s Selecting previously unselected package python3-mistune. 180s Preparing to unpack .../04-python3-mistune_3.0.2-1_all.deb ... 180s Unpacking python3-mistune (3.0.2-1) ... 180s Selecting previously unselected package python3-mypy-extensions. 180s Preparing to unpack .../05-python3-mypy-extensions_1.0.0-1_all.deb ... 180s Unpacking python3-mypy-extensions (1.0.0-1) ... 181s Selecting previously unselected package python3-isodate. 181s Preparing to unpack .../06-python3-isodate_0.6.1-2_all.deb ... 181s Unpacking python3-isodate (0.6.1-2) ... 181s Selecting previously unselected package python3-rdflib. 181s Preparing to unpack .../07-python3-rdflib_6.1.1-3_all.deb ... 181s Unpacking python3-rdflib (6.1.1-3) ... 181s Selecting previously unselected package python3-filelock. 181s Preparing to unpack .../08-python3-filelock_3.13.1-1_all.deb ... 181s Unpacking python3-filelock (3.13.1-1) ... 181s Selecting previously unselected package fonts-glyphicons-halflings. 181s Preparing to unpack .../09-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 181s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 181s Selecting previously unselected package libjs-bootstrap. 181s Preparing to unpack .../10-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 181s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 181s Selecting previously unselected package python3-schema-salad. 181s Preparing to unpack .../11-python3-schema-salad_8.5.20240102191335-1_s390x.deb ... 181s Unpacking python3-schema-salad (8.5.20240102191335-1) ... 181s Selecting previously unselected package cwl-upgrader. 181s Preparing to unpack .../12-cwl-upgrader_1.2.11-1_all.deb ... 181s Unpacking cwl-upgrader (1.2.11-1) ... 181s Selecting previously unselected package python3-packaging. 181s Preparing to unpack .../13-python3-packaging_23.2-1_all.deb ... 181s Unpacking python3-packaging (23.2-1) ... 181s Selecting previously unselected package python3-cwl-utils. 181s Preparing to unpack .../14-python3-cwl-utils_0.32-1_all.deb ... 181s Unpacking python3-cwl-utils (0.32-1) ... 181s Selecting previously unselected package cwl-utils. 181s Preparing to unpack .../15-cwl-utils_0.32-1_all.deb ... 181s Unpacking cwl-utils (0.32-1) ... 181s Selecting previously unselected package cwlformat. 181s Preparing to unpack .../16-cwlformat_2022.02.18-2_all.deb ... 181s Unpacking cwlformat (2022.02.18-2) ... 181s Selecting previously unselected package libc-ares2:s390x. 181s Preparing to unpack .../17-libc-ares2_1.27.0-1_s390x.deb ... 181s Unpacking libc-ares2:s390x (1.27.0-1) ... 181s Selecting previously unselected package node-xtend. 181s Preparing to unpack .../18-node-xtend_4.0.2-3_all.deb ... 181s Unpacking node-xtend (4.0.2-3) ... 181s Selecting previously unselected package nodejs. 181s Preparing to unpack .../19-nodejs_18.19.1+dfsg-2ubuntu4_s390x.deb ... 181s Unpacking nodejs (18.19.1+dfsg-2ubuntu4) ... 181s Selecting previously unselected package node-acorn. 181s Preparing to unpack .../20-node-acorn_8.8.1+ds+~cs25.17.7-2_all.deb ... 181s Unpacking node-acorn (8.8.1+ds+~cs25.17.7-2) ... 181s Selecting previously unselected package node-cjs-module-lexer. 181s Preparing to unpack .../21-node-cjs-module-lexer_1.2.3+dfsg-1_all.deb ... 181s Unpacking node-cjs-module-lexer (1.2.3+dfsg-1) ... 181s Selecting previously unselected package node-busboy. 181s Preparing to unpack .../22-node-busboy_1.6.0+~cs2.6.0-2_all.deb ... 181s Unpacking node-busboy (1.6.0+~cs2.6.0-2) ... 181s Selecting previously unselected package node-undici. 181s Preparing to unpack .../23-node-undici_5.26.3+dfsg1+~cs23.10.12-2_all.deb ... 181s Unpacking node-undici (5.26.3+dfsg1+~cs23.10.12-2) ... 181s Selecting previously unselected package libnode108:s390x. 181s Preparing to unpack .../24-libnode108_18.19.1+dfsg-2ubuntu4_s390x.deb ... 181s Unpacking libnode108:s390x (18.19.1+dfsg-2ubuntu4) ... 181s Selecting previously unselected package python3-execnet. 181s Preparing to unpack .../25-python3-execnet_2.0.0-2_all.deb ... 181s Unpacking python3-execnet (2.0.0-2) ... 181s Selecting previously unselected package python3-iniconfig. 181s Preparing to unpack .../26-python3-iniconfig_1.1.1-2_all.deb ... 181s Unpacking python3-iniconfig (1.1.1-2) ... 181s Selecting previously unselected package python3-pluggy. 181s Preparing to unpack .../27-python3-pluggy_1.4.0-1_all.deb ... 181s Unpacking python3-pluggy (1.4.0-1) ... 181s Selecting previously unselected package python3-pytest. 181s Preparing to unpack .../28-python3-pytest_7.4.4-1_all.deb ... 181s Unpacking python3-pytest (7.4.4-1) ... 182s Selecting previously unselected package python3-pytest-mock. 182s Preparing to unpack .../29-python3-pytest-mock_3.12.0-1.1_all.deb ... 182s Unpacking python3-pytest-mock (3.12.0-1.1) ... 182s Selecting previously unselected package python3-pytest-xdist. 182s Preparing to unpack .../30-python3-pytest-xdist_3.4.0-1_all.deb ... 182s Unpacking python3-pytest-xdist (3.4.0-1) ... 182s Selecting previously unselected package python3-mock. 182s Preparing to unpack .../31-python3-mock_5.1.0-1_all.deb ... 182s Unpacking python3-mock (5.1.0-1) ... 182s Selecting previously unselected package autopkgtest-satdep. 182s Preparing to unpack .../32-1-autopkgtest-satdep.deb ... 182s Unpacking autopkgtest-satdep (0) ... 182s Setting up python3-iniconfig (1.1.1-2) ... 182s Setting up python3-filelock (3.13.1-1) ... 182s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 182s Setting up python3-mypy-extensions (1.0.0-1) ... 182s Setting up python3-ruamel.yaml.clib:s390x (0.2.8-1) ... 182s Setting up node-cjs-module-lexer (1.2.3+dfsg-1) ... 182s Setting up libc-ares2:s390x (1.27.0-1) ... 182s Setting up python3-mock (5.1.0-1) ... 182s Setting up python3-isodate (0.6.1-2) ... 182s Setting up python3-packaging (23.2-1) ... 182s Setting up python3-pluggy (1.4.0-1) ... 183s Setting up python3-ruamel.yaml (0.17.21-1) ... 183s Setting up python3-rdflib (6.1.1-3) ... 183s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:75: SyntaxWarning: invalid escape sequence '\*' 183s """Converts the given graph into a networkx.MultiDiGraph. 183s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:132: SyntaxWarning: invalid escape sequence '\*' 183s """Converts the given graph into a networkx.DiGraph. 183s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:195: SyntaxWarning: invalid escape sequence '\*' 183s """Converts the given graph into a networkx.Graph. 183s Setting up python3-msgpack (1.0.3-3build1) ... 183s Setting up python3-cachecontrol (0.14.0-1) ... 183s Setting up node-xtend (4.0.2-3) ... 183s Setting up python3-execnet (2.0.0-2) ... 184s Setting up python3-mistune (3.0.2-1) ... 184s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 184s Setting up node-busboy (1.6.0+~cs2.6.0-2) ... 184s Setting up python3-pytest (7.4.4-1) ... 184s Setting up python3-schema-salad (8.5.20240102191335-1) ... 184s Setting up cwlformat (2022.02.18-2) ... 185s Setting up cwl-upgrader (1.2.11-1) ... 185s Setting up node-undici (5.26.3+dfsg1+~cs23.10.12-2) ... 185s Setting up python3-pytest-mock (3.12.0-1.1) ... 185s Setting up python3-pytest-xdist (3.4.0-1) ... 185s Setting up python3-cwl-utils (0.32-1) ... 186s Setting up cwl-utils (0.32-1) ... 186s Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ... 186s Setting up libnode108:s390x (18.19.1+dfsg-2ubuntu4) ... 187s Setting up nodejs (18.19.1+dfsg-2ubuntu4) ... 187s update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode 187s Setting up autopkgtest-satdep (0) ... 187s Processing triggers for libc-bin (2.39-0ubuntu2) ... 187s Processing triggers for man-db (2.12.0-3) ... 190s (Reading database ... 53238 files and directories currently installed.) 190s Removing autopkgtest-satdep (0) ... 191s autopkgtest [22:18:13]: test run-tests: [----------------------- 191s + pkg=cwl-utils 191s + [ /tmp/autopkgtest.GuqfE8/autopkgtest_tmp = ] 191s + cd /tmp/autopkgtest.GuqfE8/autopkgtest_tmp 191s + py.test-3 -rs --numprocesses=auto --pyargs cwl_utils 192s ============================= test session starts ============================== 192s platform linux -- Python 3.12.2, pytest-7.4.4, pluggy-1.4.0 192s rootdir: /tmp/autopkgtest.GuqfE8/autopkgtest_tmp 192s plugins: xdist-3.4.0, mock-3.12.0 192s created: 1/1 worker 192s 1 worker [184 items] 192s 196s ..sssssssssssssss............................................ssss....... [ 39%] 207s ........................................................................ [ 78%] 207s ........................................ [100%] 207s =============================== warnings summary =============================== 207s ../../../usr/lib/python3/dist-packages/cwl_utils/tests/util.py:6 207s /usr/lib/python3/dist-packages/cwl_utils/tests/util.py:6: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 207s from pkg_resources import Requirement, ResolutionError, resource_filename 207s 207s ../../../usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871 207s /usr/lib/python3/dist-packages/pkg_resources/__init__.py:2871: DeprecationWarning: Deprecated call to `pkg_resources.declare_namespace('ruamel')`. 207s Implementing implicit namespace packages (as specified in PEP 420) is preferred to `pkg_resources.declare_namespace`. See https://setuptools.pypa.io/en/latest/references/keywords.html#keyword-namespace-packages 207s declare_namespace(pkg) 207s 207s ../../../usr/lib/python3/dist-packages/cwlformat/formatter.py:23 207s /usr/lib/python3/dist-packages/cwlformat/formatter.py:23: DeprecationWarning: read_text is deprecated. Use files() instead. Refer to https://importlib-resources.readthedocs.io/en/latest/using.html#migrating-from-legacy for migration advice. 207s key_order_dict = yaml.load(read_text("cwlformat", "keyorder.yml")) 207s 207s ../../../usr/lib/python3.12/importlib/resources/_legacy.py:79 207s /usr/lib/python3.12/importlib/resources/_legacy.py:79: DeprecationWarning: open_text is deprecated. Use files() instead. Refer to https://importlib-resources.readthedocs.io/en/latest/using.html#migrating-from-legacy for migration advice. 207s with open_text(package, resource, encoding, errors) as fp: 207s 207s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 207s =========================== short test summary info ============================ 207s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the docker executable on the system path. 207s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the podman executable on the system path. 207s SKIPPED [2] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:12: Requires the singularity executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the docker executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the podman executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:34: Requires the singularity executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the docker executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the podman executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:72: Requires the singularity executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the docker executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the podman executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_docker_extract.py:107: Requires the singularity executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:78: Requires the podman executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:104: Requires the udocker executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:130: Requires the singularity executable on the system path. 207s SKIPPED [1] ../../../usr/lib/python3/dist-packages/cwl_utils/tests/test_js_sandbox.py:156: Requires the singularity executable on the system path. 207s ================= 165 passed, 19 skipped, 4 warnings in 17.46s ================= 208s autopkgtest [22:18:30]: test run-tests: -----------------------] 208s run-tests PASS 208s autopkgtest [22:18:30]: test run-tests: - - - - - - - - - - results - - - - - - - - - - 209s autopkgtest [22:18:31]: test command1: preparing testbed 439s autopkgtest [22:22:21]: testbed dpkg architecture: s390x 439s autopkgtest [22:22:21]: testbed apt version: 2.7.12 439s autopkgtest [22:22:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup 440s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 440s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 440s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 440s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3819 kB] 441s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [500 kB] 441s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [679 kB] 441s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 441s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 441s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 441s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4073 kB] 441s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 441s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.3 kB] 441s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 444s Fetched 9307 kB in 3s (3364 kB/s) 444s Reading package lists... 447s Reading package lists... 447s Building dependency tree... 447s Reading state information... 448s Calculating upgrade... 448s The following packages will be upgraded: 448s ubuntu-minimal ubuntu-standard 448s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 448s Need to get 21.5 kB of archives. 448s After this operation, 0 B of additional disk space will be used. 448s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-minimal s390x 1.536build1 [10.7 kB] 448s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-standard s390x 1.536build1 [10.7 kB] 448s Fetched 21.5 kB in 0s (100 kB/s) 449s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 449s Preparing to unpack .../ubuntu-minimal_1.536build1_s390x.deb ... 449s Unpacking ubuntu-minimal (1.536build1) over (1.536) ... 449s Preparing to unpack .../ubuntu-standard_1.536build1_s390x.deb ... 449s Unpacking ubuntu-standard (1.536build1) over (1.536) ... 449s Setting up ubuntu-minimal (1.536build1) ... 449s Setting up ubuntu-standard (1.536build1) ... 449s Reading package lists... 449s Building dependency tree... 449s Reading state information... 450s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 450s Unknown architecture, assuming PC-style ttyS0 450s sh: Attempting to set up Debian/Ubuntu apt sources automatically 450s sh: Distribution appears to be Ubuntu 451s Reading package lists... 451s Building dependency tree... 451s Reading state information... 451s eatmydata is already the newest version (131-1). 451s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 451s Reading package lists... 452s Building dependency tree... 452s Reading state information... 452s dbus is already the newest version (1.14.10-4ubuntu1). 452s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 452s Reading package lists... 452s Building dependency tree... 452s Reading state information... 453s rng-tools-debian is already the newest version (2.4). 453s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 453s Reading package lists... 453s Building dependency tree... 453s Reading state information... 453s The following packages will be REMOVED: 453s cloud-init* python3-configobj* python3-debconf* 453s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 453s After this operation, 3252 kB disk space will be freed. 454s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51778 files and directories currently installed.) 454s Removing cloud-init (24.1.1-0ubuntu1) ... 454s Removing python3-configobj (5.0.8-3) ... 454s Removing python3-debconf (1.5.86) ... 454s Processing triggers for man-db (2.12.0-3) ... 455s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51389 files and directories currently installed.) 455s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 455s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 455s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 455s invoke-rc.d: policy-rc.d denied execution of try-restart. 456s Reading package lists... 456s Building dependency tree... 456s Reading state information... 456s linux-generic is already the newest version (6.8.0-11.11+1). 456s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 457s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 457s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 457s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 459s Reading package lists... 459s Reading package lists... 459s Building dependency tree... 459s Reading state information... 460s Calculating upgrade... 460s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 460s Reading package lists... 460s Building dependency tree... 460s Reading state information... 461s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 461s autopkgtest [22:22:43]: rebooting testbed after setup commands that affected boot 607s Reading package lists... 607s Building dependency tree... 607s Reading state information... 607s Starting pkgProblemResolver with broken count: 0 608s Starting 2 pkgProblemResolver with broken count: 0 608s Done 608s The following additional packages will be installed: 608s cwl-upgrader cwl-utils fonts-glyphicons-halflings libjs-bootstrap 608s python3-cachecontrol python3-cwl-utils python3-filelock python3-isodate 608s python3-mistune python3-msgpack python3-mypy-extensions python3-packaging 608s python3-rdflib python3-ruamel.yaml python3-ruamel.yaml.clib 608s python3-schema-salad 608s Suggested packages: 608s cwltool cwlformat python-rdflib-doc 608s Recommended packages: 608s python3-sparqlwrapper python3-html5lib cwltool black 608s The following NEW packages will be installed: 608s autopkgtest-satdep cwl-upgrader cwl-utils fonts-glyphicons-halflings 608s libjs-bootstrap python3-cachecontrol python3-cwl-utils python3-filelock 608s python3-isodate python3-mistune python3-msgpack python3-mypy-extensions 608s python3-packaging python3-rdflib python3-ruamel.yaml 608s python3-ruamel.yaml.clib python3-schema-salad 608s 0 upgraded, 17 newly installed, 0 to remove and 0 not upgraded. 608s Need to get 2912 kB/2913 kB of archives. 608s After this operation, 18.3 MB of additional disk space will be used. 608s Get:1 /tmp/autopkgtest.GuqfE8/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [704 B] 608s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml.clib s390x 0.2.8-1 [218 kB] 609s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x python3-ruamel.yaml all 0.17.21-1 [86.6 kB] 609s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x python3-msgpack s390x 1.0.3-3build1 [101 kB] 609s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cachecontrol all 0.14.0-1 [19.0 kB] 609s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mistune all 3.0.2-1 [32.8 kB] 609s Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x python3-mypy-extensions all 1.0.0-1 [6148 B] 609s Get:8 http://ftpmaster.internal/ubuntu noble/universe s390x python3-isodate all 0.6.1-2 [24.3 kB] 609s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x python3-rdflib all 6.1.1-3 [362 kB] 609s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x python3-filelock all 3.13.1-1 [10.8 kB] 609s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 609s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 609s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x python3-schema-salad s390x 8.5.20240102191335-1 [1626 kB] 609s Get:14 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-upgrader all 1.2.11-1 [16.0 kB] 609s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 609s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cwl-utils all 0.32-1 [118 kB] 609s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x cwl-utils all 0.32-1 [2824 B] 610s Fetched 2912 kB in 1s (2255 kB/s) 610s Selecting previously unselected package python3-ruamel.yaml.clib:s390x. 610s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51332 files and directories currently installed.) 610s Preparing to unpack .../00-python3-ruamel.yaml.clib_0.2.8-1_s390x.deb ... 610s Unpacking python3-ruamel.yaml.clib:s390x (0.2.8-1) ... 610s Selecting previously unselected package python3-ruamel.yaml. 610s Preparing to unpack .../01-python3-ruamel.yaml_0.17.21-1_all.deb ... 610s Unpacking python3-ruamel.yaml (0.17.21-1) ... 610s Selecting previously unselected package python3-msgpack. 610s Preparing to unpack .../02-python3-msgpack_1.0.3-3build1_s390x.deb ... 610s Unpacking python3-msgpack (1.0.3-3build1) ... 610s Selecting previously unselected package python3-cachecontrol. 610s Preparing to unpack .../03-python3-cachecontrol_0.14.0-1_all.deb ... 610s Unpacking python3-cachecontrol (0.14.0-1) ... 610s Selecting previously unselected package python3-mistune. 610s Preparing to unpack .../04-python3-mistune_3.0.2-1_all.deb ... 610s Unpacking python3-mistune (3.0.2-1) ... 610s Selecting previously unselected package python3-mypy-extensions. 610s Preparing to unpack .../05-python3-mypy-extensions_1.0.0-1_all.deb ... 610s Unpacking python3-mypy-extensions (1.0.0-1) ... 610s Selecting previously unselected package python3-isodate. 610s Preparing to unpack .../06-python3-isodate_0.6.1-2_all.deb ... 610s Unpacking python3-isodate (0.6.1-2) ... 610s Selecting previously unselected package python3-rdflib. 610s Preparing to unpack .../07-python3-rdflib_6.1.1-3_all.deb ... 610s Unpacking python3-rdflib (6.1.1-3) ... 610s Selecting previously unselected package python3-filelock. 610s Preparing to unpack .../08-python3-filelock_3.13.1-1_all.deb ... 610s Unpacking python3-filelock (3.13.1-1) ... 610s Selecting previously unselected package fonts-glyphicons-halflings. 610s Preparing to unpack .../09-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 610s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 610s Selecting previously unselected package libjs-bootstrap. 610s Preparing to unpack .../10-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 610s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 610s Selecting previously unselected package python3-schema-salad. 610s Preparing to unpack .../11-python3-schema-salad_8.5.20240102191335-1_s390x.deb ... 610s Unpacking python3-schema-salad (8.5.20240102191335-1) ... 610s Selecting previously unselected package cwl-upgrader. 610s Preparing to unpack .../12-cwl-upgrader_1.2.11-1_all.deb ... 610s Unpacking cwl-upgrader (1.2.11-1) ... 610s Selecting previously unselected package python3-packaging. 610s Preparing to unpack .../13-python3-packaging_23.2-1_all.deb ... 610s Unpacking python3-packaging (23.2-1) ... 610s Selecting previously unselected package python3-cwl-utils. 610s Preparing to unpack .../14-python3-cwl-utils_0.32-1_all.deb ... 610s Unpacking python3-cwl-utils (0.32-1) ... 610s Selecting previously unselected package cwl-utils. 610s Preparing to unpack .../15-cwl-utils_0.32-1_all.deb ... 610s Unpacking cwl-utils (0.32-1) ... 610s Selecting previously unselected package autopkgtest-satdep. 610s Preparing to unpack .../16-2-autopkgtest-satdep.deb ... 610s Unpacking autopkgtest-satdep (0) ... 610s Setting up python3-filelock (3.13.1-1) ... 611s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 611s Setting up python3-mypy-extensions (1.0.0-1) ... 611s Setting up python3-ruamel.yaml.clib:s390x (0.2.8-1) ... 611s Setting up python3-isodate (0.6.1-2) ... 611s Setting up python3-packaging (23.2-1) ... 611s Setting up python3-ruamel.yaml (0.17.21-1) ... 611s Setting up python3-rdflib (6.1.1-3) ... 611s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:75: SyntaxWarning: invalid escape sequence '\*' 611s """Converts the given graph into a networkx.MultiDiGraph. 611s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:132: SyntaxWarning: invalid escape sequence '\*' 611s """Converts the given graph into a networkx.DiGraph. 611s /usr/lib/python3/dist-packages/rdflib/extras/external_graph_libs.py:195: SyntaxWarning: invalid escape sequence '\*' 611s """Converts the given graph into a networkx.Graph. 612s Setting up python3-msgpack (1.0.3-3build1) ... 612s Setting up python3-cachecontrol (0.14.0-1) ... 612s Setting up python3-mistune (3.0.2-1) ... 612s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 612s Setting up python3-schema-salad (8.5.20240102191335-1) ... 613s Setting up cwl-upgrader (1.2.11-1) ... 613s Setting up python3-cwl-utils (0.32-1) ... 615s Setting up cwl-utils (0.32-1) ... 615s Setting up autopkgtest-satdep (0) ... 615s Processing triggers for man-db (2.12.0-3) ... 618s (Reading database ... 52417 files and directories currently installed.) 618s Removing autopkgtest-satdep (0) ... 620s autopkgtest [22:25:22]: test command1: cwl-cite-extract --help && cwl-docker-extract --help && cwl-expression-refactor --help && cwl-normalizer --help 620s autopkgtest [22:25:22]: test command1: [----------------------- 620s usage: cwl-cite-extract [-h] input 620s 620s Print information about software used in a CWL document (Workflow or 620s CommandLineTool). For CWL Workflows, all steps will also be searched 620s (recursively). 620s 620s positional arguments: 620s input Input CWL document (CWL Workflow or CWL CommandLineTool) 620s 620s options: 620s -h, --help show this help message and exit 620s usage: cwl-docker-extract [-h] [--dir DIR] [-s] 620s [--container-engine CONTAINER_ENGINE] 620s [--force-download] 620s input 620s 620s Save container images specified in a CWL document (Workflow or 620s CommandLineTool). For CWL Workflows, all steps will also be searched 620s (recursively). 620s 620s positional arguments: 620s input Input CWL document (CWL Workflow or CWL 620s CommandLineTool) 620s 620s options: 620s -h, --help show this help message and exit 620s --dir DIR Directory in which to save images 620s -s, --singularity Use singularity to pull the image 620s --container-engine CONTAINER_ENGINE 620s Specify which command to use to run OCI containers. 620s Defaults to 'docker' (or 'singularity' if 620s --singularity/-s is passed). 620s --force-download Force pulling a newer container. 621s usage: cwl-expression-refactor [-h] [--etools] [--skip-some1] [--skip-some2] 621s dir inputs [inputs ...] 621s 621s Tool to refactor CWL documents so that any CWL expression are separate steps 621s as either ExpressionTools or CommandLineTools. Exit code 7 means a single CWL 621s document was provided but it did not need modification. 621s 621s positional arguments: 621s dir Directory in which to save converted files 621s inputs One or more CWL documents. 621s 621s options: 621s -h, --help show this help message and exit 621s --etools Output ExpressionTools, don't go all the way to 621s CommandLineTools. 621s --skip-some1 Don't process CommandLineTool.inputs.inputBinding and 621s CommandLineTool.arguments sections. 621s --skip-some2 Don't process CommandLineTool.outputEval or 621s CommandLineTool.requirements.InitialWorkDirRequirement. 621s usage: cwl-normalizer [-h] [--etools] [--skip-some1] [--skip-some2] 621s [--no-expression-refactoring] 621s dir inputs [inputs ...] 621s 621s Normalizes CWL documents. Will upgrade to CWL v1.2, and pack the result. Can 621s optionally refactor out CWL expressions. 621s 621s positional arguments: 621s dir Directory in which to save converted files 621s inputs One or more CWL documents. 621s 621s options: 621s -h, --help show this help message and exit 621s --etools Output ExpressionTools, don't go all the way to 621s CommandLineTools. 621s --skip-some1 Don't process CommandLineTool.inputs.inputBinding and 621s CommandLineTool.arguments sections. 621s --skip-some2 Don't process CommandLineTool.outputEval or CommandLin 621s eTool.requirements.InitialWorkDirRequirement. 621s --no-expression-refactoring 621s Don't do any CWL expression refactoring. 621s autopkgtest [22:25:23]: test command1: -----------------------] 622s autopkgtest [22:25:24]: test command1: - - - - - - - - - - results - - - - - - - - - - 622s command1 PASS (superficial) 622s autopkgtest [22:25:24]: test command2: preparing testbed 628s Reading package lists... 628s Building dependency tree... 628s Reading state information... 628s Starting pkgProblemResolver with broken count: 0 628s Starting 2 pkgProblemResolver with broken count: 0 628s Done 629s The following additional packages will be installed: 629s cwlformat 629s The following NEW packages will be installed: 629s autopkgtest-satdep cwlformat 629s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. 629s Need to get 7442 B/8154 B of archives. 629s After this operation, 39.9 kB of additional disk space will be used. 629s Get:1 /tmp/autopkgtest.GuqfE8/3-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [712 B] 629s Get:2 http://ftpmaster.internal/ubuntu noble/universe s390x cwlformat all 2022.02.18-2 [7442 B] 630s Fetched 7442 B in 0s (48.4 kB/s) 630s Selecting previously unselected package cwlformat. 630s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52417 files and directories currently installed.) 630s Preparing to unpack .../cwlformat_2022.02.18-2_all.deb ... 630s Unpacking cwlformat (2022.02.18-2) ... 630s Selecting previously unselected package autopkgtest-satdep. 630s Preparing to unpack .../3-autopkgtest-satdep.deb ... 630s Unpacking autopkgtest-satdep (0) ... 630s Setting up cwlformat (2022.02.18-2) ... 630s Setting up autopkgtest-satdep (0) ... 632s (Reading database ... 52435 files and directories currently installed.) 632s Removing autopkgtest-satdep (0) ... 633s autopkgtest [22:25:35]: test command2: cwl-graph-split --help 633s autopkgtest [22:25:35]: test command2: [----------------------- 633s usage: cwl-graph-split [-h] [-m MAINFILE] [-f {json,yaml}] [-p] [-C OUTDIR] 633s cwlfile 633s 633s Split a packed CWL document. 633s 633s positional arguments: 633s cwlfile 633s 633s options: 633s -h, --help show this help message and exit 633s -m MAINFILE, --mainfile MAINFILE 633s Specify the name of the main document. 633s -f {json,yaml}, --output-format {json,yaml} 633s Specify the format of the output CWL files. 633s -p, --pretty Beautify the output CWL document, only works with yaml 633s format. 633s -C OUTDIR, --outdir OUTDIR 633s Output folder for the unpacked CWL files. 634s autopkgtest [22:25:36]: test command2: -----------------------] 634s command2 PASS (superficial) 634s autopkgtest [22:25:36]: test command2: - - - - - - - - - - results - - - - - - - - - - 634s autopkgtest [22:25:36]: @@@@@@@@@@@@@@@@@@@@ summary 634s run-tests PASS 634s command1 PASS (superficial) 634s command2 PASS (superficial) 649s Creating nova instance adt-noble-s390x-cwl-utils-20240320-221502-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240319.img (UUID fdb88291-221e-4465-b557-6bcc22878017)... 649s Creating nova instance adt-noble-s390x-cwl-utils-20240320-221502-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-s390x-server-20240319.img (UUID fdb88291-221e-4465-b557-6bcc22878017)...