0s autopkgtest [00:37:40]: starting date and time: 2024-04-19 00:37:40+0000 0s autopkgtest [00:37:40]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [00:37:40]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.344gu23t/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:gsl --apt-upgrade cpl-plugin-visir --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=gsl/2.7.1+dfsg-6ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos01-s390x-7.secgroup --name adt-noble-s390x-cpl-plugin-visir-20240419-003740-juju-7f2275-prod-proposed-migration-environment-3-2bf0c0d9-6923-4135-8af8-582be5d0c1cf --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 114s autopkgtest [00:39:34]: testbed dpkg architecture: s390x 114s autopkgtest [00:39:34]: testbed apt version: 2.7.14build2 114s autopkgtest [00:39:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 115s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 115s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [54.2 kB] 115s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [12.2 kB] 115s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [2340 B] 115s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [376 kB] 115s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [95.6 kB] 115s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 115s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [976 B] 115s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 115s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [497 kB] 115s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 115s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 116s Fetched 1166 kB in 1s (957 kB/s) 116s Reading package lists... 118s sh: 4: dhclient: not found 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Calculating upgrade... 119s The following packages will be upgraded: 119s apport apport-core-dump-handler libkeyutils1 libnuma1 make man-db 119s netcat-openbsd numactl python3-apport python3-problem-report 120s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 120s Need to get 1783 kB of archives. 120s After this operation, 3072 B disk space will be freed. 120s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x python3-problem-report all 2.28.1-0ubuntu1 [23.8 kB] 120s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x python3-apport all 2.28.1-0ubuntu1 [92.1 kB] 120s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x apport-core-dump-handler all 2.28.1-0ubuntu1 [16.8 kB] 120s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x apport all 2.28.1-0ubuntu1 [83.5 kB] 120s Get:5 http://ftpmaster.internal/ubuntu noble/main s390x libkeyutils1 s390x 1.6.3-3build1 [9556 B] 120s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x netcat-openbsd s390x 1.226-1ubuntu2 [44.0 kB] 120s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libnuma1 s390x 2.0.18-1build1 [25.1 kB] 120s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x man-db s390x 2.12.0-4build2 [1253 kB] 120s Get:9 http://ftpmaster.internal/ubuntu noble/main s390x make s390x 4.3-4.1build2 [196 kB] 120s Get:10 http://ftpmaster.internal/ubuntu noble/main s390x numactl s390x 2.0.18-1build1 [40.0 kB] 121s Preconfiguring packages ... 121s Fetched 1783 kB in 1s (2314 kB/s) 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78323 files and directories currently installed.) 121s Preparing to unpack .../0-python3-problem-report_2.28.1-0ubuntu1_all.deb ... 121s Unpacking python3-problem-report (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 121s Preparing to unpack .../1-python3-apport_2.28.1-0ubuntu1_all.deb ... 121s Unpacking python3-apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 121s Preparing to unpack .../2-apport-core-dump-handler_2.28.1-0ubuntu1_all.deb ... 121s Unpacking apport-core-dump-handler (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 121s Preparing to unpack .../3-apport_2.28.1-0ubuntu1_all.deb ... 121s Unpacking apport (2.28.1-0ubuntu1) over (2.28.0-0ubuntu1) ... 121s Preparing to unpack .../4-libkeyutils1_1.6.3-3build1_s390x.deb ... 121s Unpacking libkeyutils1:s390x (1.6.3-3build1) over (1.6.3-3) ... 121s Preparing to unpack .../5-netcat-openbsd_1.226-1ubuntu2_s390x.deb ... 121s Unpacking netcat-openbsd (1.226-1ubuntu2) over (1.226-1ubuntu1) ... 121s Preparing to unpack .../6-libnuma1_2.0.18-1build1_s390x.deb ... 121s Unpacking libnuma1:s390x (2.0.18-1build1) over (2.0.18-1) ... 121s Preparing to unpack .../7-man-db_2.12.0-4build2_s390x.deb ... 121s Unpacking man-db (2.12.0-4build2) over (2.12.0-4build1) ... 121s Preparing to unpack .../8-make_4.3-4.1build2_s390x.deb ... 121s Unpacking make (4.3-4.1build2) over (4.3-4.1build1) ... 121s Preparing to unpack .../9-numactl_2.0.18-1build1_s390x.deb ... 121s Unpacking numactl (2.0.18-1build1) over (2.0.18-1) ... 121s Setting up libkeyutils1:s390x (1.6.3-3build1) ... 121s Setting up python3-problem-report (2.28.1-0ubuntu1) ... 121s Setting up netcat-openbsd (1.226-1ubuntu2) ... 122s Setting up man-db (2.12.0-4build2) ... 122s Updating database of manual pages ... 123s man-db.service is a disabled or a static unit not running, not starting it. 123s Setting up python3-apport (2.28.1-0ubuntu1) ... 124s Setting up make (4.3-4.1build2) ... 124s Setting up libnuma1:s390x (2.0.18-1build1) ... 124s Setting up numactl (2.0.18-1build1) ... 124s Setting up apport-core-dump-handler (2.28.1-0ubuntu1) ... 125s Setting up apport (2.28.1-0ubuntu1) ... 125s Installing new version of config file /etc/apport/crashdb.conf ... 125s apport-autoreport.service is a disabled or a static unit not running, not starting it. 125s Processing triggers for libc-bin (2.39-0ubuntu8) ... 126s Reading package lists... 126s Building dependency tree... 126s Reading state information... 126s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 127s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 127s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 127s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 128s Reading package lists... 128s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s Calculating upgrade... 128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s Reading package lists... 129s Building dependency tree... 129s Reading state information... 129s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 129s autopkgtest [00:39:49]: rebooting testbed after setup commands that affected boot 166s autopkgtest [00:40:26]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr 4 21:54:17 UTC 2024 169s autopkgtest [00:40:29]: @@@@@@@@@@@@@@@@@@@@ apt-source cpl-plugin-visir 173s Get:1 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-visir 4.4.2+dfsg-1 (dsc) [2440 B] 173s Get:2 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-visir 4.4.2+dfsg-1 (tar) [3022 kB] 173s Get:3 http://ftpmaster.internal/ubuntu noble/universe cpl-plugin-visir 4.4.2+dfsg-1 (diff) [12.7 kB] 173s gpgv: Signature made Mon Aug 22 08:19:29 2022 UTC 173s gpgv: using RSA key BAFC6C85F7CB143FEEB6FB157115AFD07710DCF7 173s gpgv: Can't check signature: No public key 173s dpkg-source: warning: cannot verify inline signature for ./cpl-plugin-visir_4.4.2+dfsg-1.dsc: no acceptable signature found 173s autopkgtest [00:40:33]: testing package cpl-plugin-visir version 4.4.2+dfsg-1 174s autopkgtest [00:40:34]: build not needed 175s autopkgtest [00:40:35]: test test-recipe.py: preparing testbed 176s Reading package lists... 176s Building dependency tree... 176s Reading state information... 177s Starting pkgProblemResolver with broken count: 0 177s Starting 2 pkgProblemResolver with broken count: 0 177s Done 177s The following additional packages will be installed: 177s cpl-plugin-visir libblas3 libcext0 libcfitsio10t64 libcplcore26 libcpldfs26 177s libcpldrs26 libcplui26 liberfa1 libfftw3-double3 libfftw3-single3 177s libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 177s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 177s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 177s libjs-underscore liblapack3 libwcs8 python3-astropy 177s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 177s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 177s python3-packaging python3-pluggy python3-ply python3-pytest 177s python3-pytest-arraydiff python3-pytest-astropy 177s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 177s python3-pytest-filter-subpackage python3-pytest-mock 177s python3-pytest-remotedata python3-sortedcontainers swarp 177s Suggested packages: 177s cpl-plugin-visir-calib cpl-plugin-visir-doc libfftw3-bin libfftw3-dev 177s gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html libxml2-utils 177s python-astropy-doc python3-astropy-affiliated python3-bs4 python3-h5py 177s python3-matplotlib python3-pandas python-coverage-doc gdb 177s python-hypothesis-doc gcc gfortran python3-dev python-ply-doc 177s python-pytest-mock-doc python-sortedcontainers-doc 177s Recommended packages: 177s javascript-common libjs-jquery-datatables python3-scipy python3-click 177s The following NEW packages will be installed: 177s autopkgtest-satdep cpl-plugin-visir libblas3 libcext0 libcfitsio10t64 177s libcplcore26 libcpldfs26 libcpldrs26 libcplui26 liberfa1 libfftw3-double3 177s libfftw3-single3 libgfortran5 libgomp1 libgsl27 libgslcblas0 libjs-jquery 177s libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata 177s libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-sphinxdoc 177s libjs-underscore liblapack3 libwcs8 python3-astropy 177s python3-astropy-iers-data python3-coverage python3-cpl python3-dateutil 177s python3-erfa python3-hypothesis python3-iniconfig python3-numpy 177s python3-packaging python3-pluggy python3-ply python3-pytest 177s python3-pytest-arraydiff python3-pytest-astropy 177s python3-pytest-astropy-header python3-pytest-cov python3-pytest-doctestplus 177s python3-pytest-filter-subpackage python3-pytest-mock 177s python3-pytest-remotedata python3-sortedcontainers swarp 177s 0 upgraded, 49 newly installed, 0 to remove and 0 not upgraded. 177s Need to get 20.9 MB/20.9 MB of archives. 177s After this operation, 89.3 MB of additional disk space will be used. 177s Get:1 /tmp/autopkgtest.1fZeEJ/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [728 B] 177s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 178s Get:3 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2ubuntu2 [11.5 kB] 178s Get:4 http://ftpmaster.internal/ubuntu noble/universe s390x libcext0 s390x 7.3.2+ds-1build3 [33.9 kB] 178s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x libcfitsio10t64 s390x 4.3.1-1.1build2 [609 kB] 178s Get:6 http://ftpmaster.internal/ubuntu noble/main s390x libgomp1 s390x 14-20240412-0ubuntu1 [151 kB] 178s Get:7 http://ftpmaster.internal/ubuntu noble/main s390x libfftw3-double3 s390x 3.3.10-1ubuntu3 [512 kB] 178s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x libfftw3-single3 s390x 3.3.10-1ubuntu3 [481 kB] 178s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x libcplcore26 s390x 7.3.2+ds-1build3 [600 kB] 178s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x libcplui26 s390x 7.3.2+ds-1build3 [37.9 kB] 178s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x libcpldfs26 s390x 7.3.2+ds-1build3 [41.8 kB] 178s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x libwcs8 s390x 8.2.2+ds-3build2 [289 kB] 178s Get:13 http://ftpmaster.internal/ubuntu noble/universe s390x libcpldrs26 s390x 7.3.2+ds-1build3 [73.4 kB] 178s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libgslcblas0 s390x 2.7.1+dfsg-6ubuntu2 [150 kB] 178s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libgsl27 s390x 2.7.1+dfsg-6ubuntu2 [1084 kB] 178s Get:16 http://ftpmaster.internal/ubuntu noble/universe s390x swarp s390x 2.41.5-1build3 [155 kB] 178s Get:17 http://ftpmaster.internal/ubuntu noble/universe s390x cpl-plugin-visir s390x 4.4.2+dfsg-1 [457 kB] 178s Get:18 http://ftpmaster.internal/ubuntu noble/main s390x libblas3 s390x 3.12.0-3build1 [245 kB] 178s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x libgfortran5 s390x 14-20240412-0ubuntu1 [600 kB] 178s Get:20 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-metadata all 12-4 [6582 B] 178s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [193 kB] 178s Get:22 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.5 kB] 178s Get:23 http://ftpmaster.internal/ubuntu noble/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 178s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x libjs-sphinxdoc all 7.2.6-6 [149 kB] 178s Get:25 http://ftpmaster.internal/ubuntu noble/main s390x liblapack3 s390x 3.12.0-3build1 [2976 kB] 178s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x python3-iniconfig all 1.1.1-2 [6024 B] 178s Get:27 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 24.0-1 [41.1 kB] 178s Get:28 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pluggy all 1.4.0-1 [20.4 kB] 178s Get:29 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest all 7.4.4-1 [305 kB] 178s Get:30 http://ftpmaster.internal/ubuntu noble/main s390x python3-dateutil all 2.8.2-3ubuntu1 [79.4 kB] 178s Get:31 http://ftpmaster.internal/ubuntu noble/main s390x python3-sortedcontainers all 2.4.0-2 [27.6 kB] 178s Get:32 http://ftpmaster.internal/ubuntu noble/universe s390x python3-hypothesis all 6.98.15-1 [311 kB] 178s Get:33 http://ftpmaster.internal/ubuntu noble/main s390x python3-numpy s390x 1:1.26.4+ds-6ubuntu1 [4119 kB] 178s Get:34 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-arraydiff all 0.6.1-2 [10.2 kB] 178s Get:35 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-astropy-header all 0.2.2-1 [8190 B] 178s Get:36 http://ftpmaster.internal/ubuntu noble/universe s390x python3-coverage s390x 7.4.4+dfsg1-0ubuntu2 [147 kB] 178s Get:37 http://ftpmaster.internal/ubuntu noble/universe s390x libjs-jquery-isonscreen all 1.2.0-1.1 [3244 B] 178s Get:38 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-cov all 4.1.0-1 [21.5 kB] 178s Get:39 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-doctestplus all 1.2.0-1 [23.1 kB] 178s Get:40 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-filter-subpackage all 0.2.0-1 [6094 B] 178s Get:41 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-mock all 3.12.0-1.1 [11.3 kB] 178s Get:42 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-remotedata all 0.4.1-1 [8650 B] 178s Get:43 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pytest-astropy all 0.11.0-1 [5902 B] 178s Get:44 http://ftpmaster.internal/ubuntu noble/main s390x python3-ply all 3.11-6 [46.5 kB] 178s Get:45 http://ftpmaster.internal/ubuntu noble/universe s390x python3-astropy-iers-data all 0.2024.01.01.00.33.39-1 [2046 kB] 178s Get:46 http://ftpmaster.internal/ubuntu noble/universe s390x liberfa1 s390x 2.0.1-1 [136 kB] 178s Get:47 http://ftpmaster.internal/ubuntu noble/universe s390x python3-erfa s390x 2.0.1.1+ds-3 [314 kB] 178s Get:48 http://ftpmaster.internal/ubuntu noble/universe s390x python3-astropy s390x 6.0.0-1ubuntu2 [3859 kB] 179s Get:49 http://ftpmaster.internal/ubuntu noble/universe s390x python3-cpl s390x 0.7.4-2build10 [35.1 kB] 179s Fetched 20.9 MB in 2s (13.9 MB/s) 179s Selecting previously unselected package libjs-jquery. 179s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78322 files and directories currently installed.) 179s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 179s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 179s Selecting previously unselected package libjs-jquery-hotkeys. 179s Preparing to unpack .../01-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2ubuntu2_all.deb ... 179s Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu2) ... 179s Selecting previously unselected package libcext0:s390x. 179s Preparing to unpack .../02-libcext0_7.3.2+ds-1build3_s390x.deb ... 179s Unpacking libcext0:s390x (7.3.2+ds-1build3) ... 179s Selecting previously unselected package libcfitsio10t64:s390x. 179s Preparing to unpack .../03-libcfitsio10t64_4.3.1-1.1build2_s390x.deb ... 179s Unpacking libcfitsio10t64:s390x (4.3.1-1.1build2) ... 179s Selecting previously unselected package libgomp1:s390x. 179s Preparing to unpack .../04-libgomp1_14-20240412-0ubuntu1_s390x.deb ... 179s Unpacking libgomp1:s390x (14-20240412-0ubuntu1) ... 179s Selecting previously unselected package libfftw3-double3:s390x. 179s Preparing to unpack .../05-libfftw3-double3_3.3.10-1ubuntu3_s390x.deb ... 179s Unpacking libfftw3-double3:s390x (3.3.10-1ubuntu3) ... 179s Selecting previously unselected package libfftw3-single3:s390x. 179s Preparing to unpack .../06-libfftw3-single3_3.3.10-1ubuntu3_s390x.deb ... 179s Unpacking libfftw3-single3:s390x (3.3.10-1ubuntu3) ... 179s Selecting previously unselected package libcplcore26:s390x. 179s Preparing to unpack .../07-libcplcore26_7.3.2+ds-1build3_s390x.deb ... 179s Unpacking libcplcore26:s390x (7.3.2+ds-1build3) ... 179s Selecting previously unselected package libcplui26:s390x. 179s Preparing to unpack .../08-libcplui26_7.3.2+ds-1build3_s390x.deb ... 179s Unpacking libcplui26:s390x (7.3.2+ds-1build3) ... 179s Selecting previously unselected package libcpldfs26:s390x. 179s Preparing to unpack .../09-libcpldfs26_7.3.2+ds-1build3_s390x.deb ... 179s Unpacking libcpldfs26:s390x (7.3.2+ds-1build3) ... 179s Selecting previously unselected package libwcs8:s390x. 179s Preparing to unpack .../10-libwcs8_8.2.2+ds-3build2_s390x.deb ... 179s Unpacking libwcs8:s390x (8.2.2+ds-3build2) ... 179s Selecting previously unselected package libcpldrs26:s390x. 179s Preparing to unpack .../11-libcpldrs26_7.3.2+ds-1build3_s390x.deb ... 179s Unpacking libcpldrs26:s390x (7.3.2+ds-1build3) ... 179s Selecting previously unselected package libgslcblas0:s390x. 179s Preparing to unpack .../12-libgslcblas0_2.7.1+dfsg-6ubuntu2_s390x.deb ... 179s Unpacking libgslcblas0:s390x (2.7.1+dfsg-6ubuntu2) ... 179s Selecting previously unselected package libgsl27:s390x. 179s Preparing to unpack .../13-libgsl27_2.7.1+dfsg-6ubuntu2_s390x.deb ... 179s Unpacking libgsl27:s390x (2.7.1+dfsg-6ubuntu2) ... 179s Selecting previously unselected package swarp. 179s Preparing to unpack .../14-swarp_2.41.5-1build3_s390x.deb ... 179s Unpacking swarp (2.41.5-1build3) ... 179s Selecting previously unselected package cpl-plugin-visir:s390x. 179s Preparing to unpack .../15-cpl-plugin-visir_4.4.2+dfsg-1_s390x.deb ... 179s Unpacking cpl-plugin-visir:s390x (4.4.2+dfsg-1) ... 179s Selecting previously unselected package libblas3:s390x. 179s Preparing to unpack .../16-libblas3_3.12.0-3build1_s390x.deb ... 180s Unpacking libblas3:s390x (3.12.0-3build1) ... 180s Selecting previously unselected package libgfortran5:s390x. 180s Preparing to unpack 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package libjs-sphinxdoc. 180s Preparing to unpack .../22-libjs-sphinxdoc_7.2.6-6_all.deb ... 180s Unpacking libjs-sphinxdoc (7.2.6-6) ... 180s Selecting previously unselected package liblapack3:s390x. 180s Preparing to unpack .../23-liblapack3_3.12.0-3build1_s390x.deb ... 180s Unpacking liblapack3:s390x (3.12.0-3build1) ... 180s Selecting previously unselected package python3-iniconfig. 180s Preparing to unpack .../24-python3-iniconfig_1.1.1-2_all.deb ... 180s Unpacking python3-iniconfig (1.1.1-2) ... 180s Selecting previously unselected package python3-packaging. 180s Preparing to unpack .../25-python3-packaging_24.0-1_all.deb ... 180s Unpacking python3-packaging (24.0-1) ... 180s Selecting previously unselected package python3-pluggy. 180s Preparing to unpack .../26-python3-pluggy_1.4.0-1_all.deb ... 180s Unpacking python3-pluggy (1.4.0-1) ... 180s Selecting previously unselected package python3-pytest. 180s Preparing to unpack .../27-python3-pytest_7.4.4-1_all.deb ... 180s Unpacking python3-pytest (7.4.4-1) ... 180s Selecting previously unselected package python3-dateutil. 180s Preparing to unpack .../28-python3-dateutil_2.8.2-3ubuntu1_all.deb ... 180s Unpacking python3-dateutil (2.8.2-3ubuntu1) ... 180s Selecting previously unselected package python3-sortedcontainers. 180s Preparing to unpack .../29-python3-sortedcontainers_2.4.0-2_all.deb ... 180s Unpacking python3-sortedcontainers (2.4.0-2) ... 180s Selecting previously unselected package python3-hypothesis. 180s Preparing to unpack .../30-python3-hypothesis_6.98.15-1_all.deb ... 180s Unpacking python3-hypothesis (6.98.15-1) ... 180s Selecting previously unselected package python3-numpy. 180s Preparing to unpack .../31-python3-numpy_1%3a1.26.4+ds-6ubuntu1_s390x.deb ... 180s Unpacking python3-numpy (1:1.26.4+ds-6ubuntu1) ... 180s Selecting previously unselected package python3-pytest-arraydiff. 180s Preparing to unpack .../32-python3-pytest-arraydiff_0.6.1-2_all.deb ... 180s Unpacking python3-pytest-arraydiff 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python3-pytest-doctestplus (1.2.0-1) ... 180s Selecting previously unselected package python3-pytest-filter-subpackage. 180s Preparing to unpack .../38-python3-pytest-filter-subpackage_0.2.0-1_all.deb ... 180s Unpacking python3-pytest-filter-subpackage (0.2.0-1) ... 180s Selecting previously unselected package python3-pytest-mock. 180s Preparing to unpack .../39-python3-pytest-mock_3.12.0-1.1_all.deb ... 180s Unpacking python3-pytest-mock (3.12.0-1.1) ... 180s Selecting previously unselected package python3-pytest-remotedata. 180s Preparing to unpack .../40-python3-pytest-remotedata_0.4.1-1_all.deb ... 180s Unpacking python3-pytest-remotedata (0.4.1-1) ... 180s Selecting previously unselected package python3-pytest-astropy. 180s Preparing to unpack .../41-python3-pytest-astropy_0.11.0-1_all.deb ... 180s Unpacking python3-pytest-astropy (0.11.0-1) ... 180s Selecting previously unselected package python3-ply. 180s Preparing to unpack .../42-python3-ply_3.11-6_all.deb ... 180s Unpacking python3-ply (3.11-6) ... 180s Selecting previously unselected package python3-astropy-iers-data. 180s Preparing to unpack .../43-python3-astropy-iers-data_0.2024.01.01.00.33.39-1_all.deb ... 180s Unpacking python3-astropy-iers-data (0.2024.01.01.00.33.39-1) ... 180s Selecting previously unselected package liberfa1:s390x. 180s Preparing to unpack .../44-liberfa1_2.0.1-1_s390x.deb ... 180s Unpacking liberfa1:s390x (2.0.1-1) ... 180s Selecting previously unselected package python3-erfa. 180s Preparing to unpack .../45-python3-erfa_2.0.1.1+ds-3_s390x.deb ... 180s Unpacking python3-erfa (2.0.1.1+ds-3) ... 181s Selecting previously unselected package python3-astropy. 181s Preparing to unpack .../46-python3-astropy_6.0.0-1ubuntu2_s390x.deb ... 181s Unpacking python3-astropy (6.0.0-1ubuntu2) ... 181s Selecting previously unselected package python3-cpl. 181s Preparing to unpack .../47-python3-cpl_0.7.4-2build10_s390x.deb ... 181s Unpacking python3-cpl (0.7.4-2build10) ... 181s Selecting previously unselected package autopkgtest-satdep. 181s Preparing to unpack .../48-1-autopkgtest-satdep.deb ... 181s Unpacking autopkgtest-satdep (0) ... 181s Setting up libwcs8:s390x (8.2.2+ds-3build2) ... 181s Setting up liberfa1:s390x (2.0.1-1) ... 181s Setting up python3-iniconfig (1.1.1-2) ... 181s Setting up libgslcblas0:s390x (2.7.1+dfsg-6ubuntu2) ... 181s Setting up python3-ply (3.11-6) ... 181s Setting up libgsl27:s390x (2.7.1+dfsg-6ubuntu2) ... 181s Setting up python3-coverage (7.4.4+dfsg1-0ubuntu2) ... 181s Setting up python3-sortedcontainers (2.4.0-2) ... 181s Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... 181s Setting up libgomp1:s390x (14-20240412-0ubuntu1) ... 181s Setting up python3-astropy-iers-data (0.2024.01.01.00.33.39-1) ... 182s Setting up libblas3:s390x (3.12.0-3build1) ... 182s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 182s Setting up python3-packaging (24.0-1) ... 182s Setting up libcfitsio10t64:s390x (4.3.1-1.1build2) ... 182s Setting up libfftw3-double3:s390x (3.3.10-1ubuntu3) ... 182s Setting up libgfortran5:s390x (14-20240412-0ubuntu1) ... 182s Setting up python3-pluggy (1.4.0-1) ... 182s Setting up python3-dateutil (2.8.2-3ubuntu1) ... 182s Setting up libcext0:s390x (7.3.2+ds-1build3) ... 182s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 182s Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2ubuntu2) ... 182s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 182s Setting up liblapack3:s390x (3.12.0-3build1) ... 182s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 182s Setting up libfftw3-single3:s390x (3.3.10-1ubuntu3) ... 182s Setting up python3-pytest (7.4.4-1) ... 182s Setting up python3-hypothesis (6.98.15-1) ... 183s Setting up swarp (2.41.5-1build3) ... 183s Setting up libcplcore26:s390x (7.3.2+ds-1build3) ... 183s Setting up libjs-jquery-metadata (12-4) ... 183s Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... 183s Setting up python3-pytest-remotedata (0.4.1-1) ... 183s Setting up python3-numpy (1:1.26.4+ds-6ubuntu1) ... 185s Setting up libjs-sphinxdoc (7.2.6-6) ... 185s Setting up libcplui26:s390x (7.3.2+ds-1build3) ... 185s Setting up python3-pytest-doctestplus (1.2.0-1) ... 185s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... 185s Setting up python3-pytest-mock (3.12.0-1.1) ... 186s Setting up python3-pytest-filter-subpackage (0.2.0-1) ... 186s Setting up python3-pytest-astropy-header (0.2.2-1) ... 186s Setting up libcpldrs26:s390x (7.3.2+ds-1build3) ... 186s Setting up libcpldfs26:s390x (7.3.2+ds-1build3) ... 186s Setting up python3-pytest-cov (4.1.0-1) ... 186s Setting up python3-pytest-arraydiff (0.6.1-2) ... 186s Setting up python3-erfa (2.0.1.1+ds-3) ... 186s Setting up python3-pytest-astropy (0.11.0-1) ... 187s Setting up python3-astropy (6.0.0-1ubuntu2) ... 190s Setting up python3-cpl (0.7.4-2build10) ... 190s Setting up cpl-plugin-visir:s390x (4.4.2+dfsg-1) ... 190s Setting up autopkgtest-satdep (0) ... 190s Processing triggers for man-db (2.12.0-4build2) ... 191s Processing triggers for libc-bin (2.39-0ubuntu8) ... 194s (Reading database ... 82222 files and directories currently installed.) 194s Removing autopkgtest-satdep (0) ... 195s autopkgtest [00:40:55]: test test-recipe.py: [----------------------- 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s Recipe visir_util_clip: 195s version 4.4.2 195s Parameters: {'keepfrac': 0.9, 'kappa': 5.0, 'maxite': 3, 'shift-beams': True, 'error-source': 'img-stdev', 'error-out-type': 'error', 'badimage': 0.2} 195s Docstring: Kappa-sigma clipping of outliers for each pixel 195s 195s The files listed in the Set Of Frames (sof-file) must be tagged pair- 195s wise: VISIR-raw-file.fits RAW VISIR-bpm-file.fits BPM The product(s) 195s will have a FITS card 'HIERARCH ESO PRO CATG' with a value of: BPM The 195s outliers are marked as rejected in the matching bad pixel map. 195s 195s Parameters: 195s keepfrac: The fraction of pixels to keep for the initialmedian 195s (float; default: 0.9) 195s kappa: Clip outside + or - kappa * sigma (the standard 195s deviation) (float; default: 5.0) 195s maxite: Max number of kappa-sigma clipping iterations (int; 195s default: 3) 195s shift-beams: Account for movements of the object defined in 195s CRPIX[12] (bool; default: True) 195s error-source: Defines the way errors are generated: img-stdev: 195s stdev of image timeseries: stdev of each pixel over 195s the time axis of the cube none: no error generation 195s (str; default: 'img-stdev') 195s error-out-type: Output clipped error as error, variance, weight or 195s none (str; default: 'error') 195s badimage: If percentage of clipped pixels above this value the 195s whole image is considered bad (float; default: 0.2) 195s Author: Lars Lundin 195s 195s 195s Recipe visir_old_spc_wcal: 195s version 4.4.2 195s Parameters: {'auto_bpm': True, 'plot': 0, 'slit_skew': 0.52, 'spectrum_skew': 1.73, 'vert_arc': -0.8, 'hori_arc': 0.0, 'rl': 0, 'rr': 0} 195s Docstring: Old DRS detector: Spectroscopic wavelength calibration recipe 195s 195s This recipe estimates the dispersion relation using the atmospheric 195s spectrum in a long-slit spectroscopy half-cycle frame. The files 195s listed in the Set Of Frames (sof-file) must be tagged: VISIR-Long- 195s Slit-Spectroscopy-file.fits SPEC_CAL_LMR_WCAL VISIR-Quantum- 195s Efficiency-Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric- 195s Emission-Lines-Calibration-file.fits SPEC_CAL_LINES Additionally, a 195s bad pixel map with a PRO.CATG of SPEC_BPM may be added to the Set Of 195s Frames with tag: BPM. 195s 195s Parameters: 195s auto_bpm: Automatic detection and correction of bad pixels 195s (bool; default: True) 195s plot: The recipe can produce a number of predefined plots. 195s Zero means that none of the plots are produced, while 195s increasing values (e.g. 1 or 2) increases the number 195s of plots produced. If the plotting fails a warning is 195s produced, and the recipe continues. The default 195s behaviour of the plotting is to use gnuplot (with 195s option -persist). The recipe currently produces 195s 1D-plots using gnuplot commands. The recipe user can 195s control the actual plotting-command used by the recipe 195s to create the plot by setting the environment variable 195s CPL_PLOTTER. Currently, if CPL_PLOTTER is set it must 195s contain the string 'gnuplot'. Setting it to 'cat > 195s my_gnuplot_$$.txt' causes a number of ASCII-files to 195s be created, which each produce a plot when given as 195s standard input to gnuplot (e.g. later or on a 195s different computer). A finer control of the plotting 195s options can be obtained by writing an executable 195s script, e.g. my_gnuplot.pl, that executes gnuplot 195s after setting the desired gnuplot options (e.g. set 195s terminal pslatex color) and then setting CPL_PLOTTER 195s to my_gnuplot.pl. The predefined plots include 195s plotting of images. Images can be plotted not only 195s with gnuplot, but also using the pnm format. This is 195s controlled with the environment variable CPL_IMAGER. 195s If CPL_IMAGER is set to a string that does not contain 195s the word gnuplot, the recipe will generate the plot in 195s pnm format. E.g. setting CPL_IMAGER to 'display - &' 195s will produce a gray-scale image using the image viewer 195s display. (int; default: 0) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.52) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum (degrees) 195s (counter- clockwise). Not used in High Resolution 195s (float; default: 1.73) 195s vert_arc: Distortion correction: LR Detector vertical curvature 195s (pixel). Reduced by a factor 4 in MR. Not used in HR 195s A-side. Increased by a factor 115/52 in HR B-side 195s (float; default: -0.8) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in HR 195s A-side. Reduced by a factor 2 in HR B-side (float; 195s default: 0.0) 195s rl: Reject leftmost columns in spectrum extraction, zero 195s means all columns on the left are used. In cross- 195s dispersion mode a (small) negative number may be used 195s (pixel) (int; default: 0) 195s rr: Reject rightmost columns in spectrum extraction, zero 195s means all columns on the right are used. In cross- 195s dispersion mode a (small) negative number may be used 195s (pixel) (int; default: 0) 195s Author: Lars Lundin 195s 195s 195s Recipe visir_util_undistort: 195s version 4.4.2 195s Parameters: {'bkgcorrect': True, 'xl': 117, 'yl': 110, 'xh': 125, 'yh': 150, 'slit_skew': 0.52, 'spectrum_skew': 1.73, 'vert_arc': -0.8, 'hori_arc': 0.0} 195s Docstring: Correct the distortion in spectral data 195s 195s The files listed in the Set Of Frames (sof-file) must be tagged: 195s VISIR-chopnod-corrected-file.fits CHOPNOD_CORRECTED Optionally, a bad 195s pixel map may be provided: VISIR-bpm-file.fits STATIC_MASK The 195s product(s) will have a FITS card 'HIERARCH ESO PRO CATG' with a value 195s of: UNDISTORTED The recipe default values for the transformation are 195s only valid for spectral data taken in Low resolution mode 195s 195s Parameters: 195s bkgcorrect: Cho-nod correct the data (bool; default: True) 195s xl: Coordinate in spatial direction. Together with yl it 195s defines the lower point of a rectangle containing only 195s skylines for the wavelength shift detection (int; 195s default: 117) 195s yl: Coordinate in wavelength direction. See xl (int; 195s default: 110) 195s xh: Coordinate in spatial direction. Together with yl it 195s defines the higher point of a rectangle containing 195s only skylines for the wavelength shift detection (int; 195s default: 125) 195s yh: Coordinate in wavelength direction. See xh (int; 195s default: 150) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.52) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum (degrees) 195s (counter- clockwise). Not used in High Resolution 195s (float; default: 1.73) 195s vert_arc: Distortion correction: LR Detector vertical curvature 195s (pixel). Reduced by a factor 4 in MR. Not used in HR 195s A-side. Increased by a factor 115/52 in HR B-side 195s (float; default: -0.8) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in HR 195s A-side. Reduced by a factor 2 in HR B-side (float; 195s default: 0.0) 195s Author: Lars Lundin 195s 195s 195s Recipe visir_old_util_destripe: 195s version 4.4.2 195s Parameters: {'destripe_iterations': 15, 'destripe_morpho': False} 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s Docstring: Old DRS detector: Attempt to remove stripes in spectral data 195s 195s The files listed in the Set Of Frames (sof-file) must be tagged: 195s VISIR-chopnod-corrected-file.fits BKG_CORRECTED The product(s) will 195s have a FITS card 'HIERARCH ESO PRO CATG' with a value of: DESTRIPED 195s 195s Parameters: 195s destripe_iterations: Max number of destriping iterations (0 to 195s disable destriping). Horizontal destriping is 195s done first and if no horizontal striping is 195s detected, vertical destriping is performed (int; 195s default: 15) 195s destripe_morpho: Destripe with morphological cleaning (bool; 195s default: False) 195s Author: Julian Taylor 195s 195s 195s Recipe visir_util_join: 195s version 4.4.2 195s Parameters: {} 195s Docstring: Extend the final product with extensions containing its error map, bad 195s pixel map and weight or contribution map 195s 195s The files listed in the Set Of Frames (SOF-file) must be tagged: 195s VISIR-data.fits DATA Optionally, the SOF may also contain one or more 195s of the following: VISIR-bad-pixel-map.fits BPM VISIR-error.fits 195s ERROR_MAP VISIR-contribution-map.fits CONTRIBUTION_MAP VISIR-weight- 195s map.fits WEIGHT_MAP The product(s) will have a FITS card 'HIERARCH 195s ESO PRO CATG' with a value of: JOIN 195s 195s No parameters 195s Author: Lars Lundin 195s 195s 195s Recipe visir_spc_reduce: 195s version 4.4.2 195s Parameters: {'planestart': 0, 'planelimit': -1, 'trimlow': 0, 'trimhigh': 0, 'lincorrect': False, 'xl': 117, 'yl': 110, 'xh': 125, 'yh': 150, 'slit_skew': 0.52, 'spectrum_skew': 1.73, 'vert_arc': -0.8, 'hori_arc': 0.0, 'destripe_iterations': 15, 'destripe_morpho': False, 'rej': '0-0', 'bkgcorrect': True, 'plot': 0, 'fixcombi': False, 'emis_tol': 1.0, 'rl': 0, 'rr': 0, 'apfile': 'NONE', 'ro_noise': 14.5, 'ox_sigma': 5.0, 'ox_niters': 2, 'ox_smooth': 31, 'gain': 0.75, 'ox_kernel': 3, 'respcal': 'NONE', 'delete-temp': True, 'destripe': False} 195s Docstring: Spectroscopic Observation recipe 195s 195s This recipe performs a wavelength calibration followed by spectrum 195s extraction from a combined image. It can also compute sensitivities 195s for standard star observations. It works for low and high resolution 195s including echelle mode. The files listed in the Set Of Frames (sof- 195s file) must be tagged: VISIR-Long-Slit-Spectroscopy-file.fits 195s SPEC_OBS_LMR VISIR-Quantum-Efficiency-Calibration-file.fits 195s SPEC_CAL_QEFF VISIR-Atmospheric-Emission-Lines-Calibration-file.fits 195s SPEC_CAL_LINES VISIR-Standard-Star-Flux-Catalog.fits 195s (optional)SPEC_STD_CATALOG VISIR-linearty-table.fits LINEARITY_TABLE 195s (optional) Additionally, a bad pixel map with a PRO.CATG of IMG_BPM 195s may be added to the Set Of Frames with tag: BPM. 195s 195s Parameters: 195s planestart: Plane number to start repacking from in each nod 195s cycle,earlier planes are skipped. (int; default: 195s 0) 195s planelimit: Limit number of processed inputplanes. It will 195s repack until at least this number of input 195s images have been processed or the full dataset 195s has been repacked. Always full chop cycles need 195s to be repacked so the number is adjusted upward 195s to the next multiple of images per chop cycle. 195s <= 0 for no limit. (int; default: -1) 195s trimlow: Burst data only. Number of additional planes to 195s cut from before each plane with chopper 195s movement. (int; default: 0) 195s trimhigh: Burst data only. Number of additional planes to 195s cut from after each plane with chopper movement. 195s A value of -1 does not skip the plane of the 195s movement. (int; default: 0) 195s lincorrect: Apply linearity correction. Should only be 195s enabled on high flux observations, may degrade 195s results otherwise. (bool; default: False) 195s xl: Coordinate in spatial direction. Together with 195s yl it defines the lower point of a rectangle 195s containing only skylines for the wavelength 195s shift detection (int; default: 117) 195s yl: Coordinate in wavelength direction. See xl (int; 195s default: 110) 195s xh: Coordinate in spatial direction. Together with 195s yl it defines the higher point of a rectangle 195s containing only skylines for the wavelength 195s shift detection (int; default: 125) 195s yh: Coordinate in wavelength direction. See xh (int; 195s default: 150) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.52) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum 195s (degrees) (counter- clockwise). Not used in High 195s Resolution (float; default: 1.73) 195s vert_arc: Distortion correction: LR Detector vertical 195s curvature (pixel). Reduced by a factor 4 in MR. 195s Not used in HR A-side. Increased by a factor 195s 115/52 in HR B-side (float; default: -0.8) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in 195s HR A-side. Reduced by a factor 2 in HR B-side 195s (float; default: 0.0) 195s destripe_iterations: Max number of destriping iterations (0 to 195s disable destriping). Horizontal destriping is 195s done first and if no horizontal striping is 195s detected, vertical destriping is performed (int; 195s default: 15) 195s destripe_morpho: Destripe with morphological cleaning (bool; 195s default: False) 195s rej: Each resulting pixel is the average of the 195s corresponding (interpolated) pixel value in each 195s jittered image. A positive value, n1, for the 195s first of the two integers specifies that for 195s each pixel the smallest n1 pixel values shall be 195s ignored in the averaging. Similarly, a positive 195s value, n2, for the second of the two integers 195s specifies that for each pixel the largest n2 195s pixel values shall be ignored in the averaging. 195s (str; default: '0-0') 195s bkgcorrect: Subtract the median from the spectral column 195s before extracting the wavelength. This is 195s required when the skylines do not correctly 195s cancel due to gratting oscillations (bool; 195s default: True) 195s plot: The recipe can produce a number of predefined 195s plots. Zero means that none of the plots are 195s produced, while increasing values (e.g. 1 or 2) 195s increases the number of plots produced. If the 195s plotting fails a warning is produced, and the 195s recipe continues. The default behaviour of the 195s plotting is to use gnuplot (with option 195s -persist). The recipe currently produces 195s 1D-plots using gnuplot commands. The recipe user 195s can control the actual plotting-command used by 195s the recipe to create the plot by setting the 195s environment variable CPL_PLOTTER. Currently, if 195s CPL_PLOTTER is set it must contain the string 195s 'gnuplot'. Setting it to 'cat > 195s my_gnuplot_$$.txt' causes a number of ASCII- 195s files to be created, which each produce a plot 195s when given as standard input to gnuplot (e.g. 195s later or on a different computer). A finer 195s control of the plotting options can be obtained 195s by writing an executable script, e.g. 195s my_gnuplot.pl, that executes gnuplot after 195s setting the desired gnuplot options (e.g. set 195s terminal pslatex color) and then setting 195s CPL_PLOTTER to my_gnuplot.pl. The predefined 195s plots include plotting of images. Images can be 195s plotted not only with gnuplot, but also using 195s the pnm format. This is controlled with the 195s environment variable CPL_IMAGER. If CPL_IMAGER 195s is set to a string that does not contain the 195s word gnuplot, the recipe will generate the plot 195s in pnm format. E.g. setting CPL_IMAGER to 195s 'display - &' will produce a gray-scale image 195s using the image viewer display. (int; default: 195s 0) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.52) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum 195s (degrees) (counter- clockwise). Not used in High 195s Resolution (float; default: 1.73) 195s vert_arc: Distortion correction: LR Detector vertical 195s curvature (pixel). Reduced by a factor 4 in MR. 195s Not used in HR A-side. Increased by a factor 195s 115/52 in HR B-side (float; default: -0.8) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in 195s HR A-side. Reduced by a factor 2 in HR B-side 195s (float; default: 0.0) 195s fixcombi: Perform the distortion correction on the 195s combined image, and not on each of the jittered 195s images. This will reduce excution time and 195s degrade the quality of the combined image (bool; 195s default: False) 195s emis_tol: The computation of the mean and standard 195s deviation of the sensitivity is done for 195s wavelengths with an atmospheric emissivity of at 195s most emis_min + emis_tol * (emis_max - 195s emis_min), where emis_min is the minimum 195s emissivity in the observed wavelength range and 195s emis_max is the ditto maximum. Thus emis_tol = 1 195s means that all wavelengths are included. (float; 195s default: 1.0) 195s destripe_iterations: Max number of destriping iterations (0 to 195s disable destriping). Horizontal destriping is 195s done first and if no horizontal striping is 195s detected, vertical destriping is performed (int; 195s default: 15) 195s destripe_morpho: Destripe with morphological cleaning (bool; 195s default: False) 195s rl: Reject leftmost columns in spectrum extraction, 195s zero means all columns on the left are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s rr: Reject rightmost columns in spectrum extraction, 195s zero means all columns on the right are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s apfile: An optional ASCII file specification of the 195s aperture definitions to use during spectral 195s extraction. Each line must contain either 3 195s fields for optimal extraction, or an even number 195s of fields greater than 5 for aperture 195s extraction. For optimal extraction, the 1st 195s field should be 'O', and for aperture extraction 195s it should be 'A'. In both cases the next pair of 195s fields indicate the left & right edges of the 195s source aperture in pixel coordinates. For 195s aperture extraction, fields after the 3rd define 195s the sky apertures coordinates, with the 4th 195s field indicating the method used to determine 195s the sky background [one of 'A' (average), 'F' 195s (linear fit), or 'M' (median)] followed by at 195s least one pair of pixel coordinates representing 195s the left & right edge of a sky aperture. You may 195s supply more sky apertures by supplying 195s additional pixel coordinate pairs after the 195s first. Multiple lines targeting the same order 195s are allowed. (str; default: 'NONE') 195s ro_noise: Readout noise of the detector (float; default: 195s 14.5) 195s ox_sigma: Sigma to use for clipping in optimal extraction 195s (float; default: 5.0) 195s ox_niters: Number of optimal extraction iterations to 195s perform (int; default: 2) 195s ox_smooth: Width of smoothing window to use along spectral 195s dimension during optimal extraction. A median 195s filter is used. (int; default: 31) 195s gain: Detector gain (float; default: 0.75) 195s ox_kernel: Size of square smoothing kernel, in pixels, to 195s apply to science frame before optimal extraction 195s (ignored during aperture extraction). A median 195s filter is used. (int; default: 3) 195s respcal: An optional path to a FITS file containing a 1-D 195s fringe model to be divided into the 1-D 195s extracted spectra in order to remove the 195s fringes. (str; default: 'NONE') 195s delete-temp: Delete temporary files created during processing 195s (bool; default: True) 195s destripe: Attempt to remove stripes (bool; default: False)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s 195s Author: Julian Taylor 195s 195s 195s Recipe visir_img_ff: 195s version 4.4.2 195s Parameters: {'low': 0.2, 'high': 5.0} 195s Docstring: Flat field recipe 195s 195s This recipe computes the flatfield. The files listed in the Set Of 195s Frames (sof-file) must be tagged either VISIR-flatfield-raw-file.fits 195s IM_CAL_FLAT or VISIR-flatfield-raw-file.fits IM_TECH_FLAT or VISIR- 195s flatfield-raw-file.fits SPEC_CAL_FLAT or VISIR-flatfield-raw-file.fits 195s SPEC_TECH_FLAT The corresponding primary product will have a FITS 195s card 'HIERARCH ESO PRO CATG' with a value of IMG_FF or IMG_FF_TECH or 195s SPEC_FF or SPEC_FF_TECH 195s 195s Parameters: 195s low: Low threshold for the bad pixel map (float; default: 0.2) 195s high: High threshold for the bad pixel map (float; default: 5.0) 195s Author: Lars Lundin 195s 195s 195s Recipe visir_old_spc_phot_ech: 195s version 4.4.2 195s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'plot': 0, 'slit_skew': 0.0, 'spectrum_skew': 0.0, 'vert_arc': 0.0, 'hori_arc': 0.0, 'orderoffset': 0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'fixcombi': False, 'emis_tol': 1.0, 'destripe_iterations': 15, 'destripe_morpho': False, 'rl': 0, 'rr': 0, 'ro_noise': 14.5, 'ox_sigma': 5.0, 'ox_niters': 2, 'ox_smooth': 31, 'gain': 0.75, 'ox_kernel': 3} 195s Docstring: Old DRS detector: Sensitivity computation in echelle spectroscopy 195s 195s This recipe estimates the dispersion relation using the atmospheric 195s spectrum in a echelle spectroscopy half-cycle frame. It also extracts 195s the spectrum of an observed object using a combined frame. Lastly, it 195s computes the spectral photometry of an observed standard star. The 195s files listed in the Set Of Frames (sof-file) must be tagged: VISIR- 195s Echelle-Spectroscopy-file.fits SPEC_CAL_PHOT_HRG VISIR-Quantum- 195s Efficiency-Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric- 195s Emission-Lines-Calibration-file.fits SPEC_CAL_LINES VISIR- 195s Spectroscopic-Standard-Star-Catalog.fits SPEC_STD_CATALOG 195s Additionally, a bad pixel map with a PRO.CATG of SPEC_BPM may be added 195s to the Set Of Frames with tag: BPM. 195s 195s Parameters: 195s nod: An optional ASCII specification of the nodding 195s positions (in case they are missing from the 195s FITS-file). The file must consist of one line 195s per input FITS-file and each line must consist 195s of an integer (which is ignored) followed by a 0 195s or 1 (to indicate object or sky). (str; 195s default: 'NONE') 195s auto_bpm: Automatic detection and correction of bad pixels 195s (bool; default: True) 195s g: Automatic filtering of glitches (bool; default: 195s False) 195s p: Automatic purging of half-cycle images whose 195s median deviates more than a factor three from 195s the mean of the medians of half-cycle images or 195s whose standard deviation deviates more than a 195s factor three from the mean of their standard 195s deviations (bool; default: False) 195s union: Combine images using their union, as opposed to 195s their intersection (deprecated and ignored, see 195s --combine_method) (bool; default: True) 195s rej: Each resulting pixel is the average of the 195s corresponding (interpolated) pixel value in each 195s jittered image. A positive value, n1, for the 195s first of the two integers specifies that for 195s each pixel the smallest n1 pixel values shall be 195s ignored in the averaging. Similarly, a positive 195s value, n2, for the second of the two integers 195s specifies that for each pixel the largest n2 195s pixel values shall be ignored in the averaging. 195s (str; default: '0-0') 195s plot: The recipe can produce a number of predefined 195s plots. Zero means that none of the plots are 195s produced, while increasing values (e.g. 1 or 2) 195s increases the number of plots produced. If the 195s plotting fails a warning is produced, and the 195s recipe continues. The default behaviour of the 195s plotting is to use gnuplot (with option 195s -persist). The recipe currently produces 195s 1D-plots using gnuplot commands. The recipe user 195s can control the actual plotting-command used by 195s the recipe to create the plot by setting the 195s environment variable CPL_PLOTTER. Currently, if 195s CPL_PLOTTER is set it must contain the string 195s 'gnuplot'. Setting it to 'cat > 195s my_gnuplot_$$.txt' causes a number of ASCII- 195s files to be created, which each produce a plot 195s when given as standard input to gnuplot (e.g. 195s later or on a different computer). A finer 195s control of the plotting options can be obtained 195s by writing an executable script, e.g. 195s my_gnuplot.pl, that executes gnuplot after 195s setting the desired gnuplot options (e.g. set 195s terminal pslatex color) and then setting 195s CPL_PLOTTER to my_gnuplot.pl. The predefined 195s plots include plotting of images. Images can be 195s plotted not only with gnuplot, but also using 195s the pnm format. This is controlled with the 195s environment variable CPL_IMAGER. If CPL_IMAGER 195s is set to a string that does not contain the 195s word gnuplot, the recipe will generate the plot 195s in pnm format. E.g. setting CPL_IMAGER to 195s 'display - &' will produce a gray-scale image 195s using the image viewer display. (int; default: 195s 0) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.0) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum 195s (degrees) (counter- clockwise). Not used in High 195s Resolution (float; default: 0.0) 195s vert_arc: Distortion correction: LR Detector vertical 195s curvature (pixel). Reduced by a factor 4 in MR. 195s Not used in HR A-side. Increased by a factor 195s 115/52 in HR B-side (float; default: 0.0) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in 195s HR A-side. Reduced by a factor 2 in HR B-side 195s (float; default: 0.0) 195s orderoffset: Echelle order offset. The offset is relative to 195s the main order. The allowed range of offsets 195s depend on the selected grism. The offset can 195s never exceed +/-4. If the main order is e.g. 8 195s an order offset of +1 will cause the recipe to 195s base the data reduction on order 9. With a 195s positive order offset the central wavelength 195s becomes smaller while for a negative order 195s offset the central wavelength becomes larger. 195s (int; default: 0) 195s off: An optional ASCII specification of the offsets 195s in case those in FITS- headers are missing or 195s wrong. The file must consist of one line per 195s input pair of FITS-files, and each line must 195s consist of two numbers which represent the shift 195s in pixels of that image relative to the first 195s image. The first line should thus comprise two 195s zeros. Correct FITS-header offsets mean that the 195s i'th X offset can be gotten from Xoffset_0 - 195s Xoffset_i, where Xoffset_i is the value of ESO 195s SEQ CUMOFFSETX and likewise for Y. (str; 195s default: 'NONE') 195s ref: User-defined refining of the image offsets. See 195s options objs and xcorr (bool; default: False) 195s objs: The shift and add of images needs anchor points 195s that typically are bright objects. These are 195s normally detected automatically but with user- 195s defined refining of offsets enabled, they must 195s be provided by the user through an ASCII file 195s containing one line per anchor point with each 195s line consisting of its x and y coordinate (in 195s pixels). This file is ignored with user-defined 195s refining of offsets disabled. (str; default: 195s 'NONE') 195s xcorr: If user-defined refining of offsets is enabled a 195s cross-correlation of the images is performed. In 195s order to speed up this process, this cross- 195s correlation is performed only on smaller 195s rectangles around the anchor points. The first 195s two parameters is the half-size of this 195s rectangle in pixels. The second pair is the 195s maximum shift in x and y (pixels) evaluated by 195s the cross-correlation on the rectangle. Used 195s only if user-defined refining of offsets is 195s enabled. (str; default: '10-10-25-25') 195s fixcombi: Perform the distortion correction on the 195s combined image, and not on each of the jittered 195s images. This will reduce excution time and 195s degrade the quality of the combined image (bool; 195s default: False) 195s emis_tol: The computation of the mean and standard 195s deviation of the sensitivity is done for 195s wavelengths with an atmospheric emissivity of at 195s most emis_min + emis_tol * (emis_max - 195s emis_min), where emis_min is the minimum 195s emissivity in the observed wavelength range and 195s emis_max is the ditto maximum. Thus emis_tol = 1 195s means that all wavelengths are included. (float; 195s default: 1.0) 195s destripe_iterations: Max number of destriping iterations (0 to 195s disable destriping). Horizontal destriping is 195s done first and if no horizontal striping is 195s detected, vertical destriping is performed (int; 195s default: 15) 195s destripe_morpho: Destripe with morphological cleaning (bool; 195s default: False) 195s rl: Reject leftmost columns in spectrum extraction, 195s zero means all columns on the left are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s rr: Reject rightmost columns in spectrum extraction, 195s zero means all columns on the right are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s ro_noise: Readout noise of the detector (float; default: 195s 14.5) 195s ox_sigma: Sigma to use for clipping in optimal extraction 195s (float; default: 5.0) 195s ox_niters: Number of optimal extraction iterations to 195s perform (int; default: 2) 195s ox_smooth: Width of smoothing window to use along spectral 195s dimension during optimal extraction. A median 195s filter is used. (int; default: 31) 195s gain: Detector gain (float; default: 0.75) 195s ox_kernel: Size of square smoothing kernel, in pixels, to 195s apply to science frame before optimal extraction 195s (ignored during aperture extraction). A median 195s filter is used. (int; default: 3)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s 195s Author: Lars Lundin 195s 195s 195s Recipe visir_util_detect_shift: 195s version 4.4.2 195s Parameters: {'template': 'NONE', 'min-correlation': 0.5, 'max-shift': 10.0, 'max-mad': 0.0, 'naverage': 1, 'method': 'xcorrelate', 'no-shift': False, 'no-reject': True, 'beampos': 'NONE', 'eccmax': 3.0} 195s Docstring: 2012 195s 195s Detects beams in a background subtracted multi-beam image, determines 195s the shifts between different images and their correlation. Images can 195s be rejected if their correlation is bad. The files listed in the Set 195s Of Frames (sof-file) must be tagged: VISIR-chopnod-corrected- 195s file.fits BKG_CORRECTED bad-pixel-mask.fits STATIC_MASK The output 195s consists of single beam images of the size of the throw. The shifts 195s will be written int CRPIX[12]. 195s 195s Parameters: 195s template: Correlation template used to detect shifts and 195s reject bad images. If none given an averaged image 195s is used (str; default: 'NONE') 195s min-correlation: Minimal correlation to the template required to be 195s accepted (float; default: 0.5) 195s max-shift: Maximal allowed object shift for an image to be 195s accepted (float; default: 10.0) 195s max-mad: Maximal allowed median absolute deviation for an 195s image to be accepted. <= 0 equals no limit (float; 195s default: 0.0) 195s naverage: Number of planes to average before attempting to 195s detect the shifts. (int; default: 1) 195s method: Method to determine beam shifts. xcorrelate: use 195s the cross correlation shift. brightest: use the 195s position of the brightest pixel (str; default: 195s 'xcorrelate') 195s no-shift: Sets whether to apply the determined shifts in 195s following recipes. Set to TRUE of shifts appear too 195s large. (bool; default: False) 195s no-reject: If true images with bad statistics will not be 195s rejected and no shift correction is done (bool; 195s default: True) 195s beampos: Define the positions of the beams. These positions 195s are cut by the window to extract the single beam 195s images. Format: sign:x,y,window;sign:x,y,window;... 195s where sign is "pos" or "neg" depending on whether 195s the beam is positive or negative. The window is 195s optional and defines the size of the cut image 195s around the beam. The default window is the chop 195s throw. E.g.: pos:50,60;neg:50,160; By default 195s autodetection is attempted. (str; default: 'NONE') 195s eccmax: The maximum eccentricity allowed in the combination 195s of the three (in parallel nod/chopping) or four (in 195s perpendicular nod/chopping) beams. In parallel mode, 195s three perfectly aligned points spaced with the 195s chopnod throw will have eccentricity 0, while in 195s perpedicular mode a square with the chopnod throw as 195s the side length will have eccentricity 0 (float; 195s default: 3.0) 195s Author: Find beam positions and reject bad images 195s 195s 195s Recipe visir_old_spc_obs_ech: 195s version 4.4.2 195s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'bkgcorrect': True, 'plot': 0, 'slit_skew': 0.0, 'spectrum_skew': 0.0, 'vert_arc': 0.0, 'hori_arc': 0.0, 'orderoffset': 0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'fixcombi': False, 'emis_tol': 1.0, 'destripe_iterations': 15, 'destripe_morpho': False, 'rl': 0, 'rr': 0, 'ro_noise': 14.5, 'ox_sigma': 5.0, 'ox_niters': 2, 'ox_smooth': 31, 'gain': 0.75, 'ox_kernel': 3} 195s Docstring: Old DRS detector: Spectroscopic Observation recipe in Echelle mode 195s 195s This recipe estimates the dispersion relation using the atmospheric 195s spectrum in a grism spectroscopy half-cycle frame. It also extracts 195s the spectrum of an observed object using a combined frame. The files 195s listed in the Set Of Frames (sof-file) must be tagged: VISIR-Echelle- 195s Spectroscopy-file.fits SPEC_OBS_HRG VISIR-Quantum-Efficiency- 195s Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric-Emission-Lines- 195s Calibration-file.fits SPEC_CAL_LINES Additionally, a bad pixel map 195s with a PRO.CATG of SPEC_BPM may be added to the Set Of Frames with 195s tag: BPM. 195s 195s Parameters: 195s nod: An optional ASCII specification of the nodding 195s positions (in case they are missing from the 195s FITS-file). The file must consist of one line 195s per input FITS-file and each line must consist 195s of an integer (which is ignored) followed by a 0 195s or 1 (to indicate object or sky). (str; 195s default: 'NONE') 195s auto_bpm: Automatic detection and correction of bad pixels 195s (bool; default: True) 195s g: Automatic filtering of glitches (bool; default: 195s False) 195s p: Automatic purging of half-cycle images whose 195s median deviates more than a factor three from 195s the mean of the medians of half-cycle images or 195s whose standard deviation deviates more than a 195s factor three from the mean of their standard 195s deviations (bool; default: False) 195s union: Combine images using their union, as opposed to 195s their intersection (deprecated and ignored, see 195s --combine_method) (bool; default: True) 195s rej: Each resulting pixel is the average of the 195s corresponding (interpolated) pixel value in each 195s jittered image. A positive value, n1, for the 195s first of the two integers specifies that for 195s each pixel the smallest n1 pixel values shall be 195s ignored in the averaging. Similarly, a positive 195s value, n2, for the second of the two integers 195s specifies that for each pixel the largest n2 195s pixel values shall be ignored in the averaging. 195s (str; default: '0-0') 195s bkgcorrect: Subtract the median from the spectral column 195s before extracting the wavelength. This is 195s required when the skylines do not correctly 195s cancel due to gratting oscillations (bool; 195s default: True) 195s plot: The recipe can produce a number of predefined 195s plots. Zero means that none of the plots are 195s produced, while increasing values (e.g. 1 or 2) 195s increases the number of plots produced. If the 195s plotting fails a warning is produced, and the 195s recipe continues. The default behaviour of the 195s plotting is to use gnuplot (with option 195s -persist). The recipe currently produces 195s 1D-plots using gnuplot commands. The recipe user 195s can control the actual plotting-command used by 195s the recipe to create the plot by setting the 195s environment variable CPL_PLOTTER. Currently, if 195s CPL_PLOTTER is set it must contain the string 195s 'gnuplot'. Setting it to 'cat > 195s my_gnuplot_$$.txt' causes a number of ASCII- 195s files to be created, which each produce a plot 195s when given as standard input to gnuplot (e.g. 195s later or on a different computer). A finer 195s control of the plotting options can be obtained 195s by writing an executable script, e.g. 195s my_gnuplot.pl, that executes gnuplot after 195s setting the desired gnuplot options (e.g. set 195s terminal pslatex color) and then setting 195s CPL_PLOTTER to my_gnuplot.pl. The predefined 195s plots include plotting of images. Images can be 195s plotted not only with gnuplot, but also using 195s the pnm format. This is controlled with the 195s environment variable CPL_IMAGER. If CPL_IMAGER 195s is set to a string that does not contain the 195s word gnuplot, the recipe will generate the plot 195s in pnm format. E.g. setting CPL_IMAGER to 195s 'display - &' will produce a gray-scale image 195s using the image viewer display. (int; default: 195s 0) 195s slit_skew: Distortion correction: Skew of slit (degrees) 195s (clockwise) (float; default: 0.0) 195s spectrum_skew: Distortion correction: LMR Skew of spectrum 195s (degrees) (counter- clockwise). Not used in High 195s Resolution (float; default: 0.0) 195s vert_arc: Distortion correction: LR Detector vertical 195s curvature (pixel). Reduced by a factor 4 in MR. 195s Not used in HR A-side. Increased by a factor 195s 115/52 in HR B-side (float; default: 0.0) 195s hori_arc: Distortion correction: LMR Detector horizontal 195s curvature (pixel). Increased by a factor 1.5 in 195s HR A-side. Reduced by a factor 2 in HR B-side 195s (float; default: 0.0) 195s orderoffset: Echelle order offset. The offset is relative to 195s the main order. The allowed range of offsets 195s depend on the selected grism. The offset can 195s never exceed +/-4. If the main order is e.g. 8 195s an order offset of +1 will cause the recipe to 195s base the data reduction on order 9. With a 195s positive order offset the central wavelength 195s becomes smaller while for a negative order 195s offset the central wavelength becomes larger. 195s (int; default: 0) 195s off: An optional ASCII specification of the offsets 195s in case those in FITS- headers are missing or 195s wrong. The file must consist of one line per 195s input pair of FITS-files, and each line must 195s consist of two numbers which represent the shift 195s in pixels of that image relative to the first 195s image. The first line should thus comprise two 195s zeros. Correct FITS-header offsets mean that the 195s i'th X offset can be gotten from Xoffset_0 - 195s Xoffset_i, where Xoffset_i is the value of ESO 195s SEQ CUMOFFSETX and likewise for Y. (str; 195s default: 'NONE') 195s ref: User-defined refining of the image offsets. See 195s options objs and xcorr (bool; default: False) 195s objs: The shift and add of images needs anchor points 195s that typically are bright objects. These are 195s normally detected automatically but with user- 195s defined refining of offsets enabled, they must 195s be provided by the user through an ASCII file 195s containing one line per anchor point with each 195s line consisting of its x and y coordinate (in 195s pixels). This file is ignored with user-defined 195s refining of offsets disabled. (str; default: 195s 'NONE') 195s xcorr: If user-defined refining of offsets is enabled a 195s cross-correlation of the images is performed. In 195s order to speed up this process, this cross- 195s correlation is performed only on smaller 195s rectangles around the anchor points. The first 195s two parameters is the half-size of this 195s rectangle in pixels. The second pair is the 195s maximum shift in x and y (pixels) evaluated by 195s the cross-correlation on the rectangle. Used 195s only if user-defined refining of offsets is 195s enabled. (str; default: '10-10-25-25') 195s fixcombi: Perform the distortion correction on the 195s combined image, and not on each of the jittered 195s images. This will reduce excution time and 195s degrade the quality of the combined image (bool; 195s default: False) 195s emis_tol: The computation of the mean and standard 195s deviation of the sensitivity is done for 195s wavelengths with an atmospheric emissivity of at 195s most emis_min + emis_tol * (emis_max - 195s emis_min), where emis_min is the minimum 195s emissivity in the observed wavelength range and 195s emis_max is the ditto maximum. Thus emis_tol = 1 195s means that all wavelengths are included. (float; 195s default: 1.0) 195s destripe_iterations: Max number of destriping iterations (0 to 195s disable destriping). Horizontal destriping is 195s done first and if no horizontal striping is 195s detected, vertical destriping is performed (int; 195s default: 15) 195s destripe_morpho: Destripe with morphological cleaning (bool; 195s default: False) 195s rl: Reject leftmost columns in spectrum extraction, 195s zero means all columns on the left are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s rr: Reject rightmost columns in spectrum extraction, 195s zero means all columns on the right are used. In 195s cross-dispersion mode a (small) negative number 195s may be used (pixel) (int; default: 0) 195s ro_noise: Readout noise of the detector (float; default: 195s 14.5) 195s ox_sigma: Sigma to use for clipping in optimal extraction 195s (float; default: 5.0) 195s ox_niters: Number of optimal extraction iterations to 195s perform (int; default: 2) 195s ox_smooth: Width of smoothing window to use along spectral 195s dimension during optimal extraction. A median 195s filter is used. (int; default: 31) 195s gain: Detector gain (float; default: 0.75) 195s ox_kernel: Size of square smoothing kernel, in pixels, to 195s apply to science frame before optimal extraction 195s (ignored during aperture extraction). A median 195s filter is used. (int; default: 3)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 195s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_run_swarp: 196s version 4.4.2 196s Parameters: {'output-all': False, 'extra_config': 'NONE', 'config_fname': '/usr/share/cpl-plugins/visir-4.4.2/config/visir_default.swarp', 'nprocs': -1} 196s Docstring: Run swarp program to coadd images. 196s 196s WARNING: this recipe is intented to be run in a temporary directory, 196s it does not clean up behind itself The files listed in the Set Of 196s Frames (sof-file) must be tagged: VISIR-chopnod-corrected-file.fits 196s BKG_CORRECTED VISIR-error-map.fits ERROR_MAP It will produce the 196s coaddition of each input frame separately and of all frames together. 196s The single frame product(s) will have a FITS card 'HIERARCH ESO PRO 196s CATG' with a value of: COADDED_IMAGE and COADDED_WEIGHT The total 196s coaddition will have the tags COADDED_IMAGE_COMBINED and 196s COADDED_WEIGHT_COMBINED 196s 196s Parameters: 196s output-all: Output a coadded image for each input file in addition 196s to the complete coaddition. (bool; default: False) 196s extra_config: Additional configuration parameters (str; default: 196s 'NONE') 196s config_fname: Swarp configure file name. (str; default: 196s '/usr/share/cpl- 196s plugins/visir-4.4.2/config/visir_default.swarp') 196s nprocs: Maximum number of swarp processes that can be spawned 196s simultaneously. (int; default: -1) 196s Author: Julian Taylor 196s 196s 196s Recipe visir_img_reduce: 196s version 4.4.2 196s Parameters: {'planestart': 0, 'planelimit': -1, 'trimlow': 0, 'trimhigh': 0, 'lincorrect': False, 'template': 'NONE', 'min-correlation': 0.5, 'max-shift': 10.0, 'max-mad': 0.0, 'naverage': 1, 'method': 'xcorrelate', 'no-shift': False, 'no-reject': True, 'beampos': 'NONE', 'eccmax': 3.0, 'keepfrac': 0.9, 'kappa': 5.0, 'maxite': 3, 'shift-beams': True, 'error-source': 'img-stdev', 'badimage': 0.2, 'output-all': False, 'extra_config': 'NONE', 'config_fname': '/usr/share/cpl-plugins/visir-4.4.2/config/visir_default.swarp', 'nprocs': -1, 'jy_val': -999.0, 'radii': '20-20-30', 'delete-temp': True} 196s Docstring: Combines a stack of chopped, jittered and/or nodded exposures and can 196s compute the sensitivity for standard star observations 196s 196s This recipe recombines the data observed in chopping/nodding or 196s chopping or nodding modes into one combined image using optionally 196s cross-correlation methods. The files listed in the Set Of Frames (sof- 196s file) must be tagged: VISIR-observation-file.fits IM_OBS_CHO_NOD_JIT 196s or VISIR-observation-file.fits IM_OBS_CHO_JIT or VISIR-observation- 196s file.fits IM_OBS_NOD_JIT or VISIR-observation-file.fits IM_OBS_DIR_JIT 196s or VISIR-observation-file.fits BURST VISIR-Standard-star-catalog 196s IMG_STD_CATALOG (optional) VISIR-linearty-table.fits LINEARITY_TABLE 196s (optional) Additionally, a bad pixel map with a PRO.CATG of IMG_BPM 196s may be added to the Set Of Frames with tag: BPM. 196s 196s Parameters: 196s planestart: Plane number to start repacking from in each nod 196s cycle,earlier planes are skipped. (int; default: 0) 196s planelimit: Limit number of processed inputplanes. It will 196s repack until at least this number of input images 196s have been processed or the full dataset has been 196s repacked. Always full chop cycles need to be 196s repacked so the number is adjusted upward to the 196s next multiple of images per chop cycle. <= 0 for no 196s limit. (int; default: -1) 196s trimlow: Burst data only. Number of additional planes to cut 196s from before each plane with chopper movement. (int; 196s default: 0) 196s trimhigh: Burst data only. Number of additional planes to cut 196s from after each plane with chopper movement. A 196s value of -1 does not skip the plane of the movement. 196s (int; default: 0) 196s lincorrect: Apply linearity correction. Should only be enabled 196s on high flux observations, may degrade results 196s otherwise. (bool; default: False) 196s template: Correlation template used to detect shifts and 196s reject bad images. If none given an averaged image 196s is used (str; default: 'NONE') 196s min-correlation: Minimal correlation to the template required to be 196s accepted (float; default: 0.5) 196s max-shift: Maximal allowed object shift for an image to be 196s accepted (float; default: 10.0) 196s max-mad: Maximal allowed median absolute deviation for an 196s image to be accepted. <= 0 equals no limit (float; 196s default: 0.0) 196s naverage: Number of planes to average before attempting to 196s detect the shifts. (int; default: 1) 196s method: Method to determine beam shifts. xcorrelate: use 196s the cross correlation shift. brightest: use the 196s position of the brightest pixel (str; default: 196s 'xcorrelate') 196s no-shift: Sets whether to apply the determined shifts in 196s following recipes. Set to TRUE of shifts appear too 196s large. (bool; default: False) 196s no-reject: If true images with bad statistics will not be 196s rejected and no shift correction is done (bool; 196s default: True) 196s beampos: Define the positions of the beams. These positions 196s are cut by the window to extract the single beam 196s images. Format: sign:x,y,window;sign:x,y,window;... 196s where sign is "pos" or "neg" depending on whether 196s the beam is positive or negative. The window is 196s optional and defines the size of the cut image 196s around the beam. The default window is the chop 196s throw. E.g.: pos:50,60;neg:50,160; By default 196s autodetection is attempted. (str; default: 'NONE') 196s eccmax: The maximum eccentricity allowed in the combination 196s of the three (in parallel nod/chopping) or four (in 196s perpendicular nod/chopping) beams. In parallel mode, 196s three perfectly aligned points spaced with the 196s chopnod throw will have eccentricity 0, while in 196s perpedicular mode a square with the chopnod throw as 196s the side length will have eccentricity 0 (float; 196s default: 3.0) 196s keepfrac: The fraction of pixels to keep for the initialmedian 196s (float; default: 0.9) 196s kappa: Clip outside + or - kappa * sigma (the standard 196s deviation) (float; default: 5.0) 196s maxite: Max number of kappa-sigma clipping iterations (int; 196s default: 3) 196s shift-beams: Account for movements of the object defined in 196s CRPIX[12] (bool; default: True) 196s error-source: Defines the way errors are generated: img-stdev: 196s stdev of image timeseries: stdev of each pixel over 196s the time axis of the cube none: no error generation 196s (str; default: 'img-stdev') 196s badimage: If percentage of clipped pixels above this value the 196s whole image is considered bad (float; default: 0.2) 196s output-all: Output a coadded image for each input file in 196s addition to the complete coaddition. (bool; default: 196s False) 196s extra_config: Additional configuration parameters (str; default: 196s 'NONE') 196s config_fname: Swarp configure file name. (str; default: 196s '/usr/share/cpl- 196s plugins/visir-4.4.2/config/visir_default.swarp') 196s nprocs: Maximum number of swarp processes that can be 196s spawned simultaneously. (int; default: -1) 196s jy_val: The flux of the standard star in Jansky (float; 196s default: -999.0) 196s radii: Radii : star_max bg_int bg_ext (str; default: 196s '20-20-30') 196s delete-temp: Delete temporary files created during processing 196s (bool; default: True) 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s Author: Julian Taylor 196s 196s 196s Recipe visir_util_apply_calib: 196s version 4.4.2 196s Parameters: {} 196s Docstring: Attempt to remove stripes in spectral data 196s 196s The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-chopnod-corrected-file.fits The product(s) will have a FITS 196s card 'HIERARCH ESO PRO CATG' with a value of: 196s 196s No parameters 196s Author: Julian Taylor 196s 196s 196s Recipe visir_old_spc_phot: 196s version 4.4.2 196s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'plot': 0, 'slit_skew': 0.52, 'spectrum_skew': 1.73, 'vert_arc': -0.8, 'hori_arc': 0.0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'fixcombi': False, 'emis_tol': 1.0, 'destripe_iterations': 15, 'destripe_morpho': False, 'rl': 0, 'rr': 0, 'ro_noise': 14.5, 'ox_sigma': 5.0, 'ox_niters': 2, 'ox_smooth': 31, 'gain': 0.75, 'ox_kernel': 3} 196s Docstring: Old DRS detector: Sensitivity computation in spectroscopy 196s 196s This recipe estimates the dispersion relation using the atmospheric 196s spectrum in a long-slit spectroscopy half-cycle frame. It also 196s extracts the spectrum of an observed object using a combined frame. 196s Lastly, it computes the spectral photometry of an observed standard 196s star. The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-Long-Slit-Spectroscopy-file.fits SPEC_CAL_PHOT VISIR-Quantum- 196s Efficiency-Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric- 196s Emission-Lines-Calibration-file.fits SPEC_CAL_LINES VISIR- 196s Spectroscopic-Standard-Star-Catalog.fits SPEC_STD_CATALOG 196s Additionally, a bad pixel map with a PRO.CATG of SPEC_BPM may be added 196s to the Set Of Frames with tag: BPM. 196s 196s Parameters: 196s nod: An optional ASCII specification of the nodding 196s positions (in case they are missing from the 196s FITS-file). The file must consist of one line 196s per input FITS-file and each line must consist 196s of an integer (which is ignored) followed by a 0 196s or 1 (to indicate object or sky). (str; 196s default: 'NONE') 196s auto_bpm: Automatic detection and correction of bad pixels 196s (bool; default: True) 196s g: Automatic filtering of glitches (bool; default: 196s False) 196s p: Automatic purging of half-cycle images whose 196s median deviates more than a factor three from 196s the mean of the medians of half-cycle images or 196s whose standard deviation deviates more than a 196s factor three from the mean of their standard 196s deviations (bool; default: False) 196s union: Combine images using their union, as opposed to 196s their intersection (deprecated and ignored, see 196s --combine_method) (bool; default: True) 196s rej: Each resulting pixel is the average of the 196s corresponding (interpolated) pixel value in each 196s jittered image. A positive value, n1, for the 196s first of the two integers specifies that for 196s each pixel the smallest n1 pixel values shall be 196s ignored in the averaging. Similarly, a positive 196s value, n2, for the second of the two integers 196s specifies that for each pixel the largest n2 196s pixel values shall be ignored in the averaging. 196s (str; default: '0-0') 196s plot: The recipe can produce a number of predefined 196s plots. Zero means that none of the plots are 196s produced, while increasing values (e.g. 1 or 2) 196s increases the number of plots produced. If the 196s plotting fails a warning is produced, and the 196s recipe continues. The default behaviour of the 196s plotting is to use gnuplot (with option 196s -persist). The recipe currently produces 196s 1D-plots using gnuplot commands. The recipe user 196s can control the actual plotting-command used by 196s the recipe to create the plot by setting the 196s environment variable CPL_PLOTTER. Currently, if 196s CPL_PLOTTER is set it must contain the string 196s 'gnuplot'. Setting it to 'cat > 196s my_gnuplot_$$.txt' causes a number of ASCII- 196s files to be created, which each produce a plot 196s when given as standard input to gnuplot (e.g. 196s later or on a different computer). A finer 196s control of the plotting options can be obtained 196s by writing an executable script, e.g. 196s my_gnuplot.pl, that executes gnuplot after 196s setting the desired gnuplot options (e.g. set 196s terminal pslatex color) and then setting 196s CPL_PLOTTER to my_gnuplot.pl. The predefined 196s plots include plotting of images. Images can be 196s plotted not only with gnuplot, but also using 196s the pnm format. This is controlled with the 196s environment variable CPL_IMAGER. If CPL_IMAGER 196s is set to a string that does not contain the 196s word gnuplot, the recipe will generate the plot 196s in pnm format. E.g. setting CPL_IMAGER to 196s 'display - &' will produce a gray-scale image 196s using the image viewer display. (int; default: 196s 0) 196s slit_skew: Distortion correction: Skew of slit (degrees) 196s (clockwise) (float; default: 0.52) 196s spectrum_skew: Distortion correction: LMR Skew of spectrum 196s (degrees) (counter- clockwise). Not used in High 196s Resolution (float; default: 1.73) 196s vert_arc: Distortion correction: LR Detector vertical 196s curvature (pixel). Reduced by a factor 4 in MR. 196s Not used in HR A-side. Increased by a factor 196s 115/52 in HR B-side (float; default: -0.8) 196s hori_arc: Distortion correction: LMR Detector horizontal 196s curvature (pixel). Increased by a factor 1.5 in 196s HR A-side. Reduced by a factor 2 in HR B-side 196s (float; default: 0.0) 196s off: An optional ASCII specification of the offsets 196s in case those in FITS- headers are missing or 196s wrong. The file must consist of one line per 196s input pair of FITS-files, and each line must 196s consist of two numbers which represent the shift 196s in pixels of that image relative to the first 196s image. The first line should thus comprise two 196s zeros. Correct FITS-header offsets mean that the 196s i'th X offset can be gotten from Xoffset_0 - 196s Xoffset_i, where Xoffset_i is the value of ESO 196s SEQ CUMOFFSETX and likewise for Y. (str; 196s default: 'NONE') 196s ref: User-defined refining of the image offsets. See 196s options objs and xcorr (bool; default: False) 196s objs: The shift and add of images needs anchor points 196s that typically are bright objects. These are 196s normally detected automatically but with user- 196s defined refining of offsets enabled, they must 196s be provided by the user through an ASCII file 196s containing one line per anchor point with each 196s line consisting of its x and y coordinate (in 196s pixels). This file is ignored with user-defined 196s refining of offsets disabled. (str; default: 196s 'NONE') 196s xcorr: If user-defined refining of offsets is enabled a 196s cross-correlation of the images is performed. In 196s order to speed up this process, this cross- 196s correlation is performed only on smaller 196s rectangles around the anchor points. The first 196s two parameters is the half-size of this 196s rectangle in pixels. The second pair is the 196s maximum shift in x and y (pixels) evaluated by 196s the cross-correlation on the rectangle. Used 196s only if user-defined refining of offsets is 196s enabled. (str; default: '10-10-25-25') 196s fixcombi: Perform the distortion correction on the 196s combined image, and not on each of the jittered 196s images. This will reduce excution time and 196s degrade the quality of the combined image (bool; 196s default: False) 196s emis_tol: The computation of the mean and standard 196s deviation of the sensitivity is done for 196s wavelengths with an atmospheric emissivity of at 196s most emis_min + emis_tol * (emis_max - 196s emis_min), where emis_min is the minimum 196s emissivity in the observed wavelength range and 196s emis_max is the ditto maximum. Thus emis_tol = 1 196s means that all wavelengths are included. (float; 196s default: 1.0) 196s destripe_iterations: Max number of destriping iterations (0 to 196s disable destriping). Horizontal destriping is 196s done first and if no horizontal striping is 196s detected, vertical destriping is performed (int; 196s default: 15) 196s destripe_morpho: Destripe with morphological cleaning (bool; 196s default: False) 196s rl: Reject leftmost columns in spectrum extraction, 196s zero means all columns on the left are used. In 196s cross-dispersion mode a (small) negative number 196s may be used (pixel) (int; default: 0) 196s rr: Reject rightmost columns in spectrum extraction, 196s zero means all columns on the right are used. In 196s cross-dispersion mode a (small) negative number 196s may be used (pixel) (int; default: 0) 196s ro_noise: Readout noise of the detector (float; default: 196s 14.5) 196s ox_sigma: Sigma to use for clipping in optimal extraction 196s (float; default: 5.0) 196s ox_niters: Number of optimal extraction iterations to 196s perform (int; default: 2) 196s ox_smooth: Width of smoothing window to use along spectral 196s dimension during optimal extraction. A median 196s filter is used. (int; default: 31) 196s gain: Detector gain (float; default: 0.75) 196s ox_kernel: Size of square smoothing kernel, in pixels, to 196s apply to science frame before optimal extraction 196s (ignored during aperture extraction). A median 196s filter is used. (int; default: 3)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_convert_weight: 196s version 4.4.2 196s Parameters: {'error': True, 'weight': False, 'variance': False, 'bad_value': 3.4028234663852886e+38, 'bad_flag': True} 196s Docstring: Conversion between different weight maps 196s 196s The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-weight-map.fits WEIGHT_MAP or VISIR-error-map.fits ERROR_MAP or 196s VISIR-variance-map.fits VARIANCE_MAP VISIR-bpm-file.fits BPM 196s (optional) The relation between an error e, a weight w and a variance 196s v is: e = sqrt(v) = 1/sqrt(w). Depending on the setting of the 196s boolean recipe parameters each input file will cause the following 196s product(s) to be created (each with a FITS card 'HIERARCH ESO PRO 196s CATG' with the specified value) ERROR_MAP: An error map, requires 196s input v >= 0, w > 0 WEIGHT_MAP: A weight map, requires input e > 0, v 196s > 0 VARIANCE_MAP: A variance map, requires input e >= 0, w > 0 If for 196s a given input the identical output is specified, the data unit(s) may 196s still change according to the provided bad pixel map In a weight map 196s product any bad pixel is set to 0. In a variance or error map product 196s any bad pixel is set to the value specified by the relevant recipe 196s option. 196s 196s Parameters: 196s error: Convert to error (bool; default: True) 196s weight: Convert to weight. Bad pixels are seto to 0 (bool; 196s default: False) 196s variance: Convert to variance. Bad pixels are seto to 0 (bool; 196s default: False) 196s bad_value: The value to use for any bad pixel in an error or variance 196s map (float; default: 3.4028234663852886e+38) 196s bad_flag: The value used to flag a bad pixel in an input bad pixel 196s map. True: 1. False: 0. (bool; default: True) 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_repack: 196s version 4.4.2 196s Parameters: {'planestart': 0, 'planelimit': -1, 'ncycles': -1, 'trimlow': 0, 'trimhigh': 0, 'bkgcorrect': 'none', 'normalize': True, 'compress': False, 'lincorrect': False} 196s Docstring: Conversion of raw CUBE2 or BURST images to on- and off-cubes 196s 196s The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-CUBE2-raw-file.fits CUBE2 or VISIR-BURST-raw-file.fits BURST 196s VISIR-BURST-bpm-file.fits STATIC_MASK For BURST data it will remove 196s planes where the chopper switched from on <-> off based on the 196s timestamps in the header. The product(s) will have a FITS card 196s 'HIERARCH ESO PRO CATG' with a value of one of: IMG_REPACKED_A_ON 196s (NodPos: A, ChopPos: on) IMG_REPACKED_A_OFF (NodPos: A, ChopPos: off) 196s IMG_REPACKED_B_ON (NodPos: B, ChopPos: on) IMG_REPACKED_B_OFF (NodPos: 196s B, ChopPos: off) For CUBE2, the recipe will produce a static bad-pixel 196s map, it will have a FITS card 'HIERARCH ESO PRO CATG' with a value of: 196s STATIC_MASK 196s 196s Parameters: 196s planestart: Plane number to start repacking from in each nod 196s cycle,earlier planes are skipped. (int; default: 0) 196s planelimit: Limit number of processed inputplanes. It will repack 196s until at least this number of input images have been 196s processed or the full dataset has been repacked. Always 196s full chop cycles need to be repacked so the number is 196s adjusted upward to the next multiple of images per chop 196s cycle. <= 0 for no limit. (int; default: -1) 196s ncycles: Number of full on-off cycles to repack per nod cycles. <= 196s 0 for all. (int; default: -1) 196s trimlow: Burst data only. Number of additional planes to cut from 196s before each plane with chopper movement. (int; default: 196s 0) 196s trimhigh: Burst data only. Number of additional planes to cut from 196s after each plane with chopper movement. A value of -1 196s does not skip the plane of the movement. (int; default: 196s 0) 196s bkgcorrect: Output background corrected planes by subtracting chop 196s (on/off) and nod (A/B) planes Options: none: no 196s correction chop: on - off chopnod: (Aon - Aoff) - (Bon - 196s Boff) (str; default: 'none') 196s normalize: Normalize planes by DIT (bool; default: True) 196s compress: Apply lossless compression on output files. Can only be 196s done for integer type results. (bool; default: False) 196s lincorrect: Apply linearity correction. Should only be enabled on 196s high flux observations, may degrade results otherwise. 196s (bool; default: False) 196s Author: Lars Lundin 196s 196s 196s Recipe visir_img_dark: 196s version 4.4.2 196s Parameters: {'r': '50 50 50 50', 'hot_t': 10.0, 'cold_t': 6.0, 'dev_t': 5.0, 'nsamples': 100, 'hsize': 2} 196s Docstring: Dark recipe 196s 196s This recipe computes the dark. The files listed in the Set Of Frames 196s (sof-file) must be tagged either VISIR-dark-image-raw-file.fits 196s IM_CAL_DARK or VISIR-dark-spectro-raw-file.fits SPEC_CAL_DARK The 196s corresponding four products will each have a FITS card 'HIERARCH ESO 196s PRO CATG' with values (for imaging) IMG_DARK_AVG IMG_DARK_HOT 196s IMG_DARK_COLD IMG_DARK_DEV or (for spectroscopy) SPEC_DARK_AVG 196s SPEC_DARK_HOT SPEC_DARK_COLD SPEC_DARK_DEV 196s 196s Parameters: 196s r: Rejected left right bottom and top border (pixel) (str; 196s default: '50 50 50 50') 196s hot_t: Hot pixel map threshold (float; default: 10.0) 196s cold_t: Cold pixel map threshold (float; default: 6.0) 196s dev_t: Deviant pixel map threshold (float; default: 5.0) 196s nsamples: Number of samples for Read-Out Noise (RON) computation 196s (int; default: 100) 196s hsize: Half size of the window for Read-Out Noise (RON) 196s computation (int; default: 2) 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_qc: 196s version 4.4.2 196s Parameters: {} 196s Docstring: Prepares qc parameters from data where the beam has been deteteced and 196s bad images have been removed 196s 196s The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-chopnod-corrected-file.fits BKG_CORRECTED The product(s) will 196s have a FITS card 'HIERARCH ESO PRO CATG' with a value of: QC_HEADER 196s 196s No parameters 196s Author: Julian Taylor 196s 196s 196s Recipe visir_util_spc_txt2fits: 196s version 4.4.2 196s Parameters: {'qeff': 1.0} 196s Docstring: Generate spectrum calibration FITS tables 196s 196s This recipe shall be used to generate spectrum calibration tables. The 196s sof file shall consist of 1 line with the name of an ASCII-file 196s currently tagged with either SPC_LINES_ASCII or SPC_QEFF_ASCII. The 196s file must comprise two columns: 1st: Must be wavelengths in increasing 196s order in units of meter 2nd: For SPC_LINES_ASCII-files must be the 196s atmospheric emission, while for SPC_QEFF_ASCII-files must be the 196s quantum efficiency of the detector. A SPC_LINES_ASCII-file will 196s generate a SPEC_CAL_LINES-file, and a SPC_QEFF_ASCII-file will 196s generate a SPEC_CAL_QEFF-file. The current SPEC_CAL_LINES- and 196s SPEC_CAL_QEFF-files are generated using the ASCII-files in the 196s catalogs/ directory of the VISIR source-code distribution. 196s 196s Parameters: 196s qeff: Ignored (float; default: 1.0) 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_img_std_cat: 196s version 4.4.2 196s Parameters: {} 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s Docstring: Convert ASCII-file(s) to a FITS standard star catalog 196s 196s This recipe generates a FITS standard star catalog for imaging from 196s one or more ASCII-files. Each line in the text file must have at 196s least 8 fields separated by white-space. The first field is the 196s star name, e.g. 'HD108903' which will be stored in a table column 196s labeled 'STARS'. The next 3 fields are the RA (hh mm ss) which will 196s be stored in degrees in a table column labeled 'RA' - all three are 196s non-negative and hh and mm are integer. The 3 next fields are the DEC 196s (dd mm ss) which will be stored in degrees in a table column labeled 196s 'DEC' - all three are non-negative, dd and mm are integer, while dd 196s has either a '+' or a '-' prepended (in- cluding -00). The next field 196s is the spectral type which will be stored in a table column labeled 196s 'SP_TYPE'. Every field after the first 8 are the JY values for the 196s supported filters, and may be a mixture of image or spectral 196s filters. All JY values must be positive. For each filter the JY 196s value is stored in a table column labeled with the filter name 196s taken from the first row of column headings or, if there is no 1st row 196s of column headings, using a list of 44 filter names hard-coded in the 196s recipe (in which case the number of JY fields must be exactly 42 or 196s else an error is printed and execution ends). 196s As mentioned, the 1st row may be a list of column headings. If this 196s row is supplied, the 1st 4 fields will be ignored (but dummy values 196s must be supplied anyway), and every field after those will be used as 196s the column label in the output table for that column's JY values. 196s Lines beginning with a hash (#) are treated as comments. 196s The ASCII-input should be tagged IMG_LINES_ASCII, but all input files 196s will currently be processed regardless. 196s 196s No parameters 196s Author: Lars Lundin 196s 196s 196s Recipe visir_old_spc_obs: 196s version 4.4.2 196s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'bkgcorrect': True, 'plot': 0, 'slit_skew': 0.52, 'spectrum_skew': 1.73, 'vert_arc': -0.8, 'hori_arc': 0.0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'fixcombi': False, 'emis_tol': 1.0, 'destripe_iterations': 15, 'destripe_morpho': False, 'rl': 0, 'rr': 0, 'apfile': 'NONE', 'ro_noise': 14.5, 'ox_sigma': 5.0, 'ox_niters': 2, 'ox_smooth': 31, 'gain': 0.75, 'ox_kernel': 3, 'respcal': 'NONE'} 196s Docstring: Old DRS detector: Spectroscopic Observation recipe 196s 196s This recipe estimates the dispersion relation using the atmospheric 196s spectrum in a long-slit spectroscopy half-cycle frame. It also 196s extracts the spectrum of an observed object using a combined frame. 196s The files listed in the Set Of Frames (sof-file) must be tagged: 196s VISIR-Long-Slit-Spectroscopy-file.fits SPEC_OBS_LMR VISIR-Quantum- 196s Efficiency-Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric- 196s Emission-Lines-Calibration-file.fits SPEC_CAL_LINES Additionally, a 196s bad pixel map with a PRO.CATG of SPEC_BPM may be added to the Set Of 196s Frames with tag: BPM. 196s 196s Parameters: 196s nod: An optional ASCII specification of the nodding 196s positions (in case they are missing from the 196s FITS-file). The file must consist of one line 196s per input FITS-file and each line must consist 196s of an integer (which is ignored) followed by a 0 196s or 1 (to indicate object or sky). (str; 196s default: 'NONE') 196s auto_bpm: Automatic detection and correction of bad pixels 196s (bool; default: True) 196s g: Automatic filtering of glitches (bool; default: 196s False) 196s p: Automatic purging of half-cycle images whose 196s median deviates more than a factor three from 196s the mean of the medians of half-cycle images or 196s whose standard deviation deviates more than a 196s factor three from the mean of their standard 196s deviations (bool; default: False) 196s union: Combine images using their union, as opposed to 196s their intersection (deprecated and ignored, see 196s --combine_method) (bool; default: True) 196s rej: Each resulting pixel is the average of the 196s corresponding (interpolated) pixel value in each 196s jittered image. A positive value, n1, for the 196s first of the two integers specifies that for 196s each pixel the smallest n1 pixel values shall be 196s ignored in the averaging. Similarly, a positive 196s value, n2, for the second of the two integers 196s specifies that for each pixel the largest n2 196s pixel values shall be ignored in the averaging. 196s (str; default: '0-0') 196s bkgcorrect: Subtract the median from the spectral column 196s before extracting the wavelength. This is 196s required when the skylines do not correctly 196s cancel due to gratting oscillations (bool; 196s default: True) 196s plot: The recipe can produce a number of predefined 196s plots. Zero means that none of the plots are 196s produced, while increasing values (e.g. 1 or 2) 196s increases the number of plots produced. If the 196s plotting fails a warning is produced, and the 196s recipe continues. The default behaviour of the 196s plotting is to use gnuplot (with option 196s -persist). The recipe currently produces 196s 1D-plots using gnuplot commands. The recipe user 196s can control the actual plotting-command used by 196s the recipe to create the plot by setting the 196s environment variable CPL_PLOTTER. Currently, if 196s CPL_PLOTTER is set it must contain the string 196s 'gnuplot'. Setting it to 'cat > 196s my_gnuplot_$$.txt' causes a number of ASCII- 196s files to be created, which each produce a plot 196s when given as standard input to gnuplot (e.g. 196s later or on a different computer). A finer 196s control of the plotting options can be obtained 196s by writing an executable script, e.g. 196s my_gnuplot.pl, that executes gnuplot after 196s setting the desired gnuplot options (e.g. set 196s terminal pslatex color) and then setting 196s CPL_PLOTTER to my_gnuplot.pl. The predefined 196s plots include plotting of images. Images can be 196s plotted not only with gnuplot, but also using 196s the pnm format. This is controlled with the 196s environment variable CPL_IMAGER. If CPL_IMAGER 196s is set to a string that does not contain the 196s word gnuplot, the recipe will generate the plot 196s in pnm format. E.g. setting CPL_IMAGER to 196s 'display - &' will produce a gray-scale image 196s using the image viewer display. (int; default: 196s 0) 196s slit_skew: Distortion correction: Skew of slit (degrees) 196s (clockwise) (float; default: 0.52) 196s spectrum_skew: Distortion correction: LMR Skew of spectrum 196s (degrees) (counter- clockwise). Not used in High 196s Resolution (float; default: 1.73) 196s vert_arc: Distortion correction: LR Detector vertical 196s curvature (pixel). Reduced by a factor 4 in MR. 196s Not used in HR A-side. Increased by a factor 196s 115/52 in HR B-side (float; default: -0.8) 196s hori_arc: Distortion correction: LMR Detector horizontal 196s curvature (pixel). Increased by a factor 1.5 in 196s HR A-side. Reduced by a factor 2 in HR B-side 196s (float; default: 0.0) 196s off: An optional ASCII specification of the offsets 196s in case those in FITS- headers are missing or 196s wrong. The file must consist of one line per 196s input pair of FITS-files, and each line must 196s consist of two numbers which represent the shift 196s in pixels of that image relative to the first 196s image. The first line should thus comprise two 196s zeros. Correct FITS-header offsets mean that the 196s i'th X offset can be gotten from Xoffset_0 - 196s Xoffset_i, where Xoffset_i is the value of ESO 196s SEQ CUMOFFSETX and likewise for Y. (str; 196s default: 'NONE') 196s ref: User-defined refining of the image offsets. See 196s options objs and xcorr (bool; default: False) 196s objs: The shift and add of images needs anchor points 196s that typically are bright objects. These are 196s normally detected automatically but with user- 196s defined refining of offsets enabled, they must 196s be provided by the user through an ASCII file 196s containing one line per anchor point with each 196s line consisting of its x and y coordinate (in 196s pixels). This file is ignored with user-defined 196s refining of offsets disabled. (str; default: 196s 'NONE') 196s xcorr: If user-defined refining of offsets is enabled a 196s cross-correlation of the images is performed. In 196s order to speed up this process, this cross- 196s correlation is performed only on smaller 196s rectangles around the anchor points. The first 196s two parameters is the half-size of this 196s rectangle in pixels. The second pair is the 196s maximum shift in x and y (pixels) evaluated by 196s the cross-correlation on the rectangle. Used 196s only if user-defined refining of offsets is 196s enabled. (str; default: '10-10-25-25') 196s fixcombi: Perform the distortion correction on the 196s combined image, and not on each of the jittered 196s images. This will reduce excution time and 196s degrade the quality of the combined image (bool; 196s default: False) 196s emis_tol: The computation of the mean and standard 196s deviation of the sensitivity is done for 196s wavelengths with an atmospheric emissivity of at 196s most emis_min + emis_tol * (emis_max - 196s emis_min), where emis_min is the minimum 196s emissivity in the observed wavelength range and 196s emis_max is the ditto maximum. Thus emis_tol = 1 196s means that all wavelengths are included. (float; 196s default: 1.0) 196s destripe_iterations: Max number of destriping iterations (0 to 196s disable destriping). Horizontal destriping is 196s done first and if no horizontal striping is 196s detected, vertical destriping is performed (int; 196s default: 15) 196s destripe_morpho: Destripe with morphological cleaning (bool; 196s default: False) 196s rl: Reject leftmost columns in spectrum extraction, 196s zero means all columns on the left are used. In 196s cross-dispersion mode a (small) negative number 196s may be used (pixel) (int; default: 0) 196s rr: Reject rightmost columns in spectrum extraction, 196s zero means all columns on the right are used. In 196s cross-dispersion mode a (small) negative number 196s may be used (pixel) (int; default: 0) 196s apfile: An optional ASCII file specification of the 196s aperture definitions to use during spectral 196s extraction. Each line must contain either 3 196s fields for optimal extraction, or an even number 196s of fields greater than 5 for aperture 196s extraction. For optimal extraction, the 1st 196s field should be 'O', and for aperture extraction 196s it should be 'A'. In both cases the next pair of 196s fields indicate the left & right edges of the 196s source aperture in pixel coordinates. For 196s aperture extraction, fields after the 3rd define 196s the sky apertures coordinates, with the 4th 196s field indicating the method used to determine 196s the sky background [one of 'A' (average), 'F' 196s (linear fit), or 'M' (median)] followed by at 196s least one pair of pixel coordinates representing 196s the left & right edge of a sky aperture. You may 196s supply more sky apertures by supplying 196s additional pixel coordinate pairs after the 196s first. Multiple lines targeting the same order 196s are allowed. (str; default: 'NONE') 196s ro_noise: Readout noise of the detector (float; default: 196s 14.5) 196s ox_sigma: Sigma to use for clipping in optimal extraction 196s (float; default: 5.0) 196s ox_niters: Number of optimal extraction iterations to 196s perform (int; default: 2) 196s ox_smooth: Width of smoothing window to use along spectral 196s dimension during optimal extraction. A median 196s filter is used. (int; default: 31) 196s gain: Detector gain (float; default: 0.75) 196s ox_kernel: Size of square smoothing kernel, in pixels, to 196s apply to science frame before optimal extraction 196s (ignored during aperture extraction). A median 196s filter is used. (int; default: 3) 196s respcal: An optional path to a FITS file containing a 1-D 196s fringe model to be divided into the 1-D 196s extracted spectra in order to remove the 196s fringes. (str; default: 'NONE')[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s 196s Author: Lars Lundin 196s 196s 196s Recipe visir_util_spc_std_cat: 196s version 4.4.2 196s Parameters: {} 196s Docstring: Generate a FITS catalog of spectroscopic standard stars 196s 196s This recipe shall be used to generate a FITS catalog of spectroscopic 196s standard stars for the VISIR pipeline. The sof file shall consist of 196s lines with the name of an ASCII-file named .txt, e.g. 196s HD133165.txt and the tag SPC_CAT_ASCII. All input ASCII-files must 196s comprise the same number of lines. The first line of the ASCII-file 196s must have 6 fields separated by white-space. The first three fields 196s are the RA (hh mm ss) which will be stored in degrees in a table 196s column labeled 'RA' - all three are non-negative and hh and mm are 196s integer. The 3 last fields are the DEC (dd mm ss) which will be stored 196s in degrees in a table column labeled 'DEC' - all three are non- 196s negative, dd and mm are integer, and dd has either a '+' or a '-' 196s prepended (including -00). The remaining lines must all consist of two 196s fields separated by white-space. The first field is the wavelength (in 196s microns) and the second the (positive) model flux in W/m2/m. The 196s wavelengths must be identical in all the input files. 196s 196s No parameters 196s Author: Lars Lundin 196s 196s 196s Recipe visir_old_img_phot: 196s version 4.4.2 196s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'plot': 0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'jy_val': -999.0, 'radii': '20-20-30', 'combine_method': 'union', 'destripe_iterations': 15, 'destripe_morpho': False, 'eccmax': 0.25} 196s Docstring: Old DRS detector: Sensitivity computation 196s 196s This recipe computes the conversion factor and the sentitivity of a 196s standard star. It requires a standard star catalog. The files listed 196s in the Set Of Frames (sof-file) must be tagged: VISIR-std-star- 196s observation.fits IM_CAL_PHOT VISIR-Imaging-Standard-Star-Catalog.fits 196s IMG_STD_CATALOG The primary product will have a FITS card 'HIERARCH 196s ESO PRO CATG' with a string value of 'IMG_PHOT_COMBINED' and the 196s corresponding beam-collapsed product will have a FITS card 'HIERARCH 196s ESO PRO CATG' with a value of IMG_PHOT_ONEBEAM Additionally, a bad 196s pixel map with a PRO.CATG of IMG_BPM may be added to the Set Of Frames 196s with tag: BPM. 196s 196s Parameters: 196s nod: An optional ASCII specification of the nodding 196s positions (in case they are missing from the 196s FITS-file). The file must consist of one line 196s per input FITS-file and each line must consist 196s of an integer (which is ignored) followed by a 0 196s or 1 (to indicate object or sky). (str; 196s default: 'NONE') 196s auto_bpm: Automatic detection and correction of bad pixels 196s (bool; default: True) 196s g: Automatic filtering of glitches (bool; default: 196s False) 196s p: Automatic purging of half-cycle images whose 196s median deviates more than a factor three from 196s the mean of the medians of half-cycle images or 196s whose standard deviation deviates more than a 196s factor three from the mean of their standard 196s deviations (bool; default: False) 196s union: Combine images using their union, as opposed to 196s their intersection (deprecated and ignored, see 196s --combine_method) (bool; default: True) 196s rej: Each resulting pixel is the average of the 196s corresponding (interpolated) pixel value in each 196s jittered image. A positive value, n1, for the 196s first of the two integers specifies that for 196s each pixel the smallest n1 pixel values shall be 196s ignored in the averaging. Similarly, a positive 196s value, n2, for the second of the two integers 196s specifies that for each pixel the largest n2 196s pixel values shall be ignored in the averaging. 196s (str; default: '0-0') 196s plot: The recipe can produce a number of predefined 196s plots. Zero means that none of the plots are 196s produced, while increasing values (e.g. 1 or 2) 196s increases the number of plots produced. If the 196s plotting fails a warning is produced, and the 196s recipe continues. The default behaviour of the 196s plotting is to use gnuplot (with option 196s -persist). The recipe currently produces 196s 1D-plots using gnuplot commands. The recipe user 196s can control the actual plotting-command used by 196s the recipe to create the plot by setting the 196s environment variable CPL_PLOTTER. Currently, if 196s CPL_PLOTTER is set it must contain the string 196s 'gnuplot'. Setting it to 'cat > 196s my_gnuplot_$$.txt' causes a number of ASCII- 196s files to be created, which each produce a plot 196s when given as standard input to gnuplot (e.g. 196s later or on a different computer). A finer 196s control of the plotting options can be obtained 196s by writing an executable script, e.g. 196s my_gnuplot.pl, that executes gnuplot after 196s setting the desired gnuplot options (e.g. set 196s terminal pslatex color) and then setting 196s CPL_PLOTTER to my_gnuplot.pl. The predefined 196s plots include plotting of images. Images can be 196s plotted not only with gnuplot, but also using 196s the pnm format. This is controlled with the 196s environment variable CPL_IMAGER. If CPL_IMAGER 196s is set to a string that does not contain the 196s word gnuplot, the recipe will generate the plot 196s in pnm format. E.g. setting CPL_IMAGER to 196s 'display - &' will produce a gray-scale image 196s using the image viewer display. (int; default: 196s 0) 196s off: An optional ASCII specification of the offsets 196s in case those in FITS- headers are missing or 196s wrong. The file must consist of one line per 196s input pair of FITS-files, and each line must 196s consist of two numbers which represent the shift 196s in pixels of that image relative to the first 196s image. The first line should thus comprise two 196s zeros. Correct FITS-header offsets mean that the 196s i'th X offset can be gotten from Xoffset_0 - 196s Xoffset_i, where Xoffset_i is the value of ESO 196s SEQ CUMOFFSETX and likewise for Y. (str; 196s default: 'NONE') 196s ref: User-defined refining of the image offsets. See 196s options objs and xcorr (bool; default: False) 196s objs: The shift and add of images needs anchor points 196s that typically are bright objects. These are 196s normally detected automatically but with user- 196s defined refining of offsets enabled, they must 196s be provided by the user through an ASCII file 196s containing one line per anchor point with each 196s line consisting of its x and y coordinate (in 196s pixels). This file is ignored with user-defined 196s refining of offsets disabled. (str; default: 196s 'NONE') 196s xcorr: If user-defined refining of offsets is enabled a 196s cross-correlation of the images is performed. In 196s order to speed up this process, this cross- 196s correlation is performed only on smaller 196s rectangles around the anchor points. The first 196s two parameters is the half-size of this 196s rectangle in pixels. The second pair is the 196s maximum shift in x and y (pixels) evaluated by 196s the cross-correlation on the rectangle. Used 196s only if user-defined refining of offsets is 196s enabled. (str; default: '10-10-25-25') 196s jy_val: The flux of the standard star in Jansky (float; 196s default: -999.0) 196s radii: Radii : star_max bg_int bg_ext (str; default: 196s '20-20-30') 196s combine_method: Combine images using one of: 1) Onto the first 196s image (first); 2) Their union (union); 3) Their 196s intersection (inter). NB: Only the 196s 'first'-method produces an image product with 196s WCS coordinates. A successful 'first'-method 196s always produces a combined image with dimensions 196s equal to those of the input images. For the 196s 'union'-method the result image is at least as 196s large as the input images while for the 196s 'inter'-method the result image is at most as 196s large as the input images (str; default: 196s 'union') 196s destripe_iterations: Max number of destriping iterations (0 to 196s disable destriping). Horizontal destriping is 196s done first and if no horizontal striping is 196s detected, vertical destriping is performed (int; 196s default: 15) 196s destripe_morpho: Destripe with morphological cleaning (bool; 196s default: False) 196s eccmax: The maximum eccentricity allowed in the 196s combination of the three (in parallel 196s nod/chopping) or four (in perpendicular 196s nod/chopping) beams. In parallel mode, three 196s perfectly aligned points spaced with the chopnod 196s throw will have eccentricity 0, while in 196s perpedicular mode a square with the chopnod 196s throw as the side length will have eccentricity 196s 0 (float; default: 0.25)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s 196s Author: Lars Lundin 196s 196s 196s Recipe visir_old_img_combine: 196s version 4.4.2 196s Parameters: {'nod': 'NONE', 'auto_bpm': True, 'g': False, 'p': False, 'union': True, 'rej': '0-0', 'plot': 0, 'off': 'NONE', 'ref': False, 'objs': 'NONE', 'xcorr': '10-10-25-25', 'combine_method': 'union', 'destripe_iterations': 15, 'destripe_morpho': False, 'eccmax': 0.25} 196s Docstring: Old DRS detector: Images combination recipe 196s 196s This recipe recombines the data observed in chopping/nodding or 196s chopping or nodding modes into one combined image using optionally 196s cross-correlation methods. The files listed in the Set Of Frames (sof- 196s file) must be tagged: VISIR-observation-file.fits IM_OBS_CHO_NOD_JIT 196s or VISIR-observation-file.fits IM_OBS_CHO_JIT or VISIR-observation- 196s file.fits IM_OBS_NOD_JIT or VISIR-observation-file.fits IM_OBS_DIR_JIT 196s The corresponding primary product will have a FITS card 'HIERARCH ESO 196s PRO CATG' with a value of IMG_OBS_COMBINED_CNJ or IMG_OBS_COMBINED_CJ 196s or IMG_OBS_COMBINED_NJ or IMG_OBS_COMBINED_DJ and the corresponding 196s beam-collapsed product will have a FITS card 'HIERARCH ESO PRO CATG' 196s with a value of IMG_OBS_ONEBEAM_CNJ or IMG_OBS_ONEBEAM_CJ or 196s IMG_OBS_ONEBEAM_NJ or IMG_OBS_ONEBEAM_DJ Additionally, a bad pixel 196s map with a PRO.CATG of IMG_BPM may be added to the Set Of Frames with 196s tag: BPM. 196s 196s Parameters: 196s nod: An optional ASCII specification of the nodding 196s positions (in case they are missing from the 196s FITS-file). The file must consist of one line 196s per input FITS-file and each line must consist 196s of an integer (which is ignored) followed by a 0 196s or 1 (to indicate object or sky). (str; 196s default: 'NONE') 196s auto_bpm: Automatic detection and correction of bad pixels 196s (bool; default: True) 196s g: Automatic filtering of glitches (bool; default: 196s False) 196s p: Automatic purging of half-cycle images whose 196s median deviates more than a factor three from 196s the mean of the medians of half-cycle images or 196s whose standard deviation deviates more than a 196s factor three from the mean of their standard 196s deviations (bool; default: False) 196s union: Combine images using their union, as opposed to 196s their intersection (deprecated and ignored, see 196s --combine_method) (bool; default: True) 196s rej: Each resulting pixel is the average of the 196s corresponding (interpolated) pixel value in each 196s jittered image. A positive value, n1, for the 196s first of the two integers specifies that for 196s each pixel the smallest n1 pixel values shall be 196s ignored in the averaging. Similarly, a positive 196s value, n2, for the second of the two integers 196s specifies that for each pixel the largest n2 196s pixel values shall be ignored in the averaging. 196s (str; default: '0-0') 196s plot: The recipe can produce a number of predefined 196s plots. Zero means that none of the plots are 196s produced, while increasing values (e.g. 1 or 2) 196s increases the number of plots produced. If the 196s plotting fails a warning is produced, and the 196s recipe continues. The default behaviour of the 196s plotting is to use gnuplot (with option 196s -persist). The recipe currently produces 196s 1D-plots using gnuplot commands. The recipe user 196s can control the actual plotting-command used by 196s the recipe to create the plot by setting the 196s environment variable CPL_PLOTTER. Currently, if 196s CPL_PLOTTER is set it must contain the string 196s 'gnuplot'. Setting it to 'cat > 196s my_gnuplot_$$.txt' causes a number of ASCII- 196s files to be created, which each produce a plot 196s when given as standard input to gnuplot (e.g. 196s later or on a different computer). A finer 196s control of the plotting options can be obtained 196s by writing an executable script, e.g. 196s my_gnuplot.pl, that executes gnuplot after 196s setting the desired gnuplot options (e.g. set 196s terminal pslatex color) and then setting 196s CPL_PLOTTER to my_gnuplot.pl. The predefined 196s plots include plotting of images. Images can be 196s plotted not only with gnuplot, but also using 196s the pnm format. This is controlled with the 196s environment variable CPL_IMAGER. If CPL_IMAGER 196s is set to a string that does not contain the 196s word gnuplot, the recipe will generate the plot 196s in pnm format. E.g. setting CPL_IMAGER to 196s 'display - &' will produce a gray-scale image 196s using the image viewer display. (int; default: 196s 0) 196s off: An optional ASCII specification of the offsets 196s in case those in FITS- headers are missing or 196s wrong. The file must consist of one line per 196s input pair of FITS-files, and each line must 196s consist of two numbers which represent the shift 196s in pixels of that image relative to the first 196s image. The first line should thus comprise two 196s zeros. Correct FITS-header offsets mean that the 196s i'th X offset can be gotten from Xoffset_0 - 196s Xoffset_i, where Xoffset_i is the value of ESO 196s SEQ CUMOFFSETX and likewise for Y. (str; 196s default: 'NONE') 196s ref: User-defined refining of the image offsets. See 196s options objs and xcorr (bool; default: False) 196s objs: The shift and add of images needs anchor points 196s that typically are bright objects. These are 196s normally detected automatically but with user- 196s defined refining of offsets enabled, they must 196s be provided by the user through an ASCII file 196s containing one line per anchor point with each 196s line consisting of its x and y coordinate (in 196s pixels). This file is ignored with user-defined 196s refining of offsets disabled. (str; default: 196s 'NONE') 196s xcorr: If user-defined refining of offsets is enabled a 196s cross-correlation of the images is performed. In 196s order to speed up this process, this cross- 196s correlation is performed only on smaller 196s rectangles around the anchor points. The first 196s two parameters is the half-size of this 196s rectangle in pixels. The second pair is the 196s maximum shift in x and y (pixels) evaluated by 196s the cross-correlation on the rectangle. Used 196s only if user-defined refining of offsets is 196s enabled. (str; default: '10-10-25-25') 196s combine_method: Combine images using one of: 1) Onto the first 196s image (first); 2) Their union (union); 3) Their 196s intersection (inter). NB: Only the 196s 'first'-method produces an image product with 196s WCS coordinates. A successful 'first'-method 196s always produces a combined image with dimensions 196s equal to those of the input images. For the 196s 'union'-method the result image is at least as 196s large as the input images while for the 196s 'inter'-method the result image is at most as 196s large as the input images (str; default: 196s 'union') 196s destripe_iterations: Max number of destriping iterations (0 to 196s disable destriping). Horizontal destriping is 196s done first and if no horizontal striping is 196s detected, vertical destriping is performed (int; 196s default: 15) 196s destripe_morpho: Destripe with morphological cleaning (bool; 196s default: False) 196s eccmax: The maximum eccentricity allowed in the 196s combination of the three (in parallel 196s nod/chopping) or four (in perpendicular 196s nod/chopping) beams. In parallel mode, three 196s perfectly aligned points spaced with the chopnod 196s throw will have eccentricity 0, while in 196s perpedicular mode a square with the chopnod 196s throw as the side length will have eccentricity 196s 0 (float; default: 0.25)[ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_join 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_spc_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_undistort 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_util_destripe 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_ff 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_reduce 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_detect_shift 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_clip 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_run_swarp 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_apply_calib 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_convert_weight 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_repack 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_dark 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_qc 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_txt2fits 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_img_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_obs 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_util_spc_std_cat 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_phot 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_img_combine 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_img_trans 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s [ INFO ] Run-time version 7.3.2 of CPL is higher than the version (70202) used to compile visir_old_spc_wcal_ech 196s 196s Author: Lars Lundin 196s 196s 196s Recipe visir_img_trans: 196s version 4.4.2 196s Parameters: {} 196s Docstring: Instrument Transmission recipe 196s 196s This recipe computes the transmission at different wavelengths by 196s comparing the flux of a bright star for different observations. The 196s files listed in the Set Of Frames (sof-file) must be tagged: VISIR- 196s transmission-file.fits IM_TEC_TRANS The resuts are given in a table. 196s 196s No parameters 196s Author: Lars Lundin 196s 196s 196s Recipe visir_old_spc_wcal_ech: 196s version 4.4.2 196s Parameters: {'auto_bpm': True, 'plot': 0, 'slit_skew': 0.0, 'spectrum_skew': 0.0, 'vert_arc': 0.0, 'hori_arc': 0.0, 'orderoffset': 0, 'rl': 0, 'rr': 0} 196s Docstring: Old DRS detector: Spectroscopic wavelength calibration recipe in 196s Echelle 196s 196s This recipe estimates the dispersion relation using the atmospheric 196s spectrum in a grism spectroscopy half-cycle frame. The files listed in 196s the Set Of Frames (sof-file) must be tagged: VISIR-Echelle- 196s Spectroscopy-file.fits SPEC_CAL_HRG_WCAL VISIR-Quantum-Efficiency- 196s Calibration-file.fits SPEC_CAL_QEFF VISIR-Atmospheric-Emission-Lines- 196s Calibration-file.fits SPEC_CAL_LINES Additionally, a bad pixel map 196s with a PRO.CATG of SPEC_BPM may be added to the Set Of Frames with 196s tag: BPM. 196s 196s Parameters: 196s auto_bpm: Automatic detection and correction of bad pixels 196s (bool; default: True) 196s plot: The recipe can produce a number of predefined plots. 196s Zero means that none of the plots are produced, while 196s increasing values (e.g. 1 or 2) increases the number 196s of plots produced. If the plotting fails a warning is 196s produced, and the recipe continues. The default 196s behaviour of the plotting is to use gnuplot (with 196s option -persist). The recipe currently produces 196s 1D-plots using gnuplot commands. The recipe user can 196s control the actual plotting-command used by the recipe 196s to create the plot by setting the environment variable 196s CPL_PLOTTER. Currently, if CPL_PLOTTER is set it must 196s contain the string 'gnuplot'. Setting it to 'cat > 196s my_gnuplot_$$.txt' causes a number of ASCII-files to 196s be created, which each produce a plot when given as 196s standard input to gnuplot (e.g. later or on a 196s different computer). A finer control of the plotting 196s options can be obtained by writing an executable 196s script, e.g. my_gnuplot.pl, that executes gnuplot 196s after setting the desired gnuplot options (e.g. set 196s terminal pslatex color) and then setting CPL_PLOTTER 196s to my_gnuplot.pl. The predefined plots include 196s plotting of images. Images can be plotted not only 196s with gnuplot, but also using the pnm format. This is 196s controlled with the environment variable CPL_IMAGER. 196s If CPL_IMAGER is set to a string that does not contain 196s the word gnuplot, the recipe will generate the plot in 196s pnm format. E.g. setting CPL_IMAGER to 'display - &' 196s will produce a gray-scale image using the image viewer 196s display. (int; default: 0) 196s slit_skew: Distortion correction: Skew of slit (degrees) 196s (clockwise) (float; default: 0.0) 196s spectrum_skew: Distortion correction: LMR Skew of spectrum (degrees) 196s (counter- clockwise). Not used in High Resolution 196s (float; default: 0.0) 196s vert_arc: Distortion correction: LR Detector vertical curvature 196s (pixel). Reduced by a factor 4 in MR. Not used in HR 196s A-side. Increased by a factor 115/52 in HR B-side 196s (float; default: 0.0) 196s hori_arc: Distortion correction: LMR Detector horizontal 196s curvature (pixel). Increased by a factor 1.5 in HR 196s A-side. Reduced by a factor 2 in HR B-side (float; 196s default: 0.0) 196s orderoffset: Echelle order offset. The offset is relative to the 196s main order. The allowed range of offsets depend on the 196s selected grism. The offset can never exceed +/-4. If 196s the main order is e.g. 8 an order offset of +1 will 196s cause the recipe to base the data reduction on order 196s 9. With a positive order offset the central wavelength 196s becomes smaller while for a negative order offset the 196s central wavelength becomes larger. (int; default: 0) 196s rl: Reject leftmost columns in spectrum extraction, zero 196s means all columns on the left are used. In cross- 196s dispersion mode a (small) negative number may be used 196s (pixel) (int; default: 0) 196s rr: Reject rightmost columns in spectrum extraction, zero 196s means all columns on the right are used. In cross- 196s dispersion mode a (small) negative number may be used 196s (pixel) (int; default: 0) 196s Author: Lars Lundin 196s 196s 196s autopkgtest [00:40:56]: test test-recipe.py: -----------------------] 196s test-recipe.py PASS (superficial) 196s autopkgtest [00:40:56]: test test-recipe.py: - - - - - - - - - - results - - - - - - - - - - 197s autopkgtest [00:40:57]: @@@@@@@@@@@@@@@@@@@@ summary 197s test-recipe.py PASS (superficial) 212s Creating nova instance adt-noble-s390x-cpl-plugin-visir-20240419-003740-juju-7f2275-prod-proposed-migration-environment-3-2bf0c0d9-6923-4135-8af8-582be5d0c1cf from image adt/ubuntu-noble-s390x-server-20240418.img (UUID 85e53509-ea4e-4742-afdb-a30c7e328507)...