0s autopkgtest [00:19:12]: starting date and time: 2024-03-22 00:19:12+0000 0s autopkgtest [00:19:12]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [00:19:12]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.nhuhrhvc/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:openjdk-lts,src:alsa-lib,src:cups,src:gnutls28,src:libpng1.6,src:nettle,src:wp2latex --apt-upgrade chromhmm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=openjdk-lts/11.0.23~7ea-1ubuntu1 alsa-lib/1.2.11-1build1 cups/2.4.7-1.2ubuntu1 gnutls28/3.8.3-1.1ubuntu2 libpng1.6/1.6.43-3 nettle/3.9.1-2.2 wp2latex/4.4~ds-1build1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-10.secgroup --name adt-noble-s390x-chromhmm-20240322-001912-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 74s autopkgtest [00:20:26]: testbed dpkg architecture: s390x 74s autopkgtest [00:20:26]: testbed apt version: 2.7.12 74s autopkgtest [00:20:26]: @@@@@@@@@@@@@@@@@@@@ test bed setup 75s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 75s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [53.9 kB] 75s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [494 kB] 76s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3800 kB] 76s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 76s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [670 kB] 76s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 76s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 76s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 76s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [3989 kB] 76s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 76s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [45.1 kB] 76s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 78s Fetched 9188 kB in 2s (3747 kB/s) 78s Reading package lists... 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s Calculating upgrade... 81s The following packages will be upgraded: 81s cloud-init debianutils python3-markupsafe 82s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 82s Need to get 700 kB of archives. 82s After this operation, 11.3 kB disk space will be freed. 82s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x debianutils s390x 5.17 [90.1 kB] 82s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x python3-markupsafe s390x 2.1.5-1build1 [12.8 kB] 82s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x cloud-init all 24.1.2-0ubuntu1 [597 kB] 82s Preconfiguring packages ... 82s Fetched 700 kB in 1s (1231 kB/s) 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 82s Preparing to unpack .../debianutils_5.17_s390x.deb ... 82s Unpacking debianutils (5.17) over (5.16) ... 82s Setting up debianutils (5.17) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52171 files and directories currently installed.) 83s Preparing to unpack .../python3-markupsafe_2.1.5-1build1_s390x.deb ... 83s Unpacking python3-markupsafe (2.1.5-1build1) over (2.1.5-1) ... 83s Preparing to unpack .../cloud-init_24.1.2-0ubuntu1_all.deb ... 83s Unpacking cloud-init (24.1.2-0ubuntu1) over (24.1.1-0ubuntu1) ... 83s Setting up cloud-init (24.1.2-0ubuntu1) ... 84s Setting up python3-markupsafe (2.1.5-1build1) ... 84s Processing triggers for man-db (2.12.0-3) ... 85s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 86s Unknown architecture, assuming PC-style ttyS0 86s sh: Attempting to set up Debian/Ubuntu apt sources automatically 86s sh: Distribution appears to be Ubuntu 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s eatmydata is already the newest version (131-1). 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s dbus is already the newest version (1.14.10-4ubuntu1). 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s rng-tools-debian is already the newest version (2.4). 88s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s The following packages will be REMOVED: 88s cloud-init* python3-configobj* python3-debconf* 88s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 88s After this operation, 3256 kB disk space will be freed. 88s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 88s Removing cloud-init (24.1.2-0ubuntu1) ... 89s Removing python3-configobj (5.0.8-3) ... 89s Removing python3-debconf (1.5.86) ... 89s Processing triggers for man-db (2.12.0-3) ... 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 90s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 90s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 90s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 90s invoke-rc.d: policy-rc.d denied execution of try-restart. 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s linux-generic is already the newest version (6.8.0-11.11+1). 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 91s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 91s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 91s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 92s Reading package lists... 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s Calculating upgrade... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 93s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 93s autopkgtest [00:20:45]: rebooting testbed after setup commands that affected boot 112s autopkgtest [00:21:04]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 114s autopkgtest [00:21:06]: @@@@@@@@@@@@@@@@@@@@ apt-source chromhmm 123s Get:1 http://ftpmaster.internal/ubuntu noble/universe chromhmm 1.25+dfsg-1 (dsc) [2150 B] 123s Get:2 http://ftpmaster.internal/ubuntu noble/universe chromhmm 1.25+dfsg-1 (tar) [45.1 MB] 123s Get:3 http://ftpmaster.internal/ubuntu noble/universe chromhmm 1.25+dfsg-1 (diff) [9452 B] 123s gpgv: Signature made Wed Feb 7 07:31:57 2024 UTC 123s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 123s gpgv: issuer "tille@debian.org" 123s gpgv: Can't check signature: No public key 123s dpkg-source: warning: cannot verify inline signature for ./chromhmm_1.25+dfsg-1.dsc: no acceptable signature found 125s autopkgtest [00:21:17]: testing package chromhmm version 1.25+dfsg-1 126s autopkgtest [00:21:18]: build not needed 131s autopkgtest [00:21:23]: test run-sample-analysis: preparing testbed 136s Reading package lists... 136s Building dependency tree... 136s Reading state information... 136s Starting pkgProblemResolver with broken count: 1 136s Starting 2 pkgProblemResolver with broken count: 1 136s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 136s Broken libhtsjdk-java:s390x Depends on libcommons-compress-java:s390x < none | 1.25.0-1 @un uH > 136s Considering libcommons-compress-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 136s Re-Instated libcommons-compress-java:s390x 136s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 136s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 136s Re-Instated libcommons-jexl2-java:s390x 136s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 136s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 136s Re-Instated libmjson-java:s390x 136s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 136s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 136s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 136s Re-Instated librhino-java:s390x 136s Broken libhtsjdk-java:s390x Depends on libsnappy-java:s390x < none | 1.1.10.5-1 @un uH > 136s Considering libsnappy-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 136s Re-Instated libsnappy1v5:s390x 136s Re-Instated libsnappy-jni:s390x 136s Re-Instated libsnappy-java:s390x 136s Done 136s Some packages could not be installed. This may mean that you have 136s requested an impossible situation or if you are using the unstable 136s distribution that some required packages have not yet been created 136s or been moved out of Incoming. 136s The following information may help to resolve the situation: 136s 136s The following packages have unmet dependencies: 136s libhtsjdk-java : Depends: libngs-java but it is not installable 136s E: Unable to correct problems, you have held broken packages. 136s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from noble-proposed 137s Reading package lists... 137s Building dependency tree... 137s Reading state information... 137s Starting pkgProblemResolver with broken count: 1 137s Starting 2 pkgProblemResolver with broken count: 1 137s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 137s Broken libhtsjdk-java:s390x Depends on libcommons-compress-java:s390x < none | 1.25.0-1 @un uH > 137s Considering libcommons-compress-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 137s Re-Instated libcommons-compress-java:s390x 137s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 137s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 137s Re-Instated libcommons-jexl2-java:s390x 137s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 137s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 137s Re-Instated libmjson-java:s390x 137s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 137s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 137s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 137s Re-Instated librhino-java:s390x 137s Broken libhtsjdk-java:s390x Depends on libsnappy-java:s390x < none | 1.1.10.5-1 @un uH > 137s Considering libsnappy-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 137s Re-Instated libsnappy1v5:s390x 137s Re-Instated libsnappy-jni:s390x 137s Re-Instated libsnappy-java:s390x 137s Done 137s Some packages could not be installed. This may mean that you have 137s requested an impossible situation or if you are using the unstable 137s distribution that some required packages have not yet been created 137s or been moved out of Incoming. 137s The following information may help to resolve the situation: 137s 137s The following packages have unmet dependencies: 137s libhtsjdk-java : Depends: libngs-java but it is not installable 137s E: Unable to correct problems, you have held broken packages. 137s autopkgtest: WARNING: Test dependencies are unsatisfiable - calling apt install on test deps directly for further data about failing dependencies in test logs 137s Reading package lists... 138s Building dependency tree... 138s Reading state information... 138s Starting pkgProblemResolver with broken count: 1 138s Starting 2 pkgProblemResolver with broken count: 1 138s Investigating (0) libhtsjdk-java:s390x < none -> 4.1.0+dfsg-1 @un puN Ib > 138s Broken libhtsjdk-java:s390x Depends on libcommons-compress-java:s390x < none | 1.25.0-1 @un uH > 138s Considering libcommons-compress-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 138s Re-Instated libcommons-compress-java:s390x 138s Broken libhtsjdk-java:s390x Depends on libcommons-jexl2-java:s390x < none | 2.1.1-6 @un uH > 138s Considering libcommons-jexl2-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 138s Re-Instated libcommons-jexl2-java:s390x 138s Broken libhtsjdk-java:s390x Depends on libmjson-java:s390x < none | 1.4.0-3 @un uH > 138s Considering libmjson-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 138s Re-Instated libmjson-java:s390x 138s Broken libhtsjdk-java:s390x Depends on libngs-java:s390x < none @un H > 138s Broken libhtsjdk-java:s390x Depends on librhino-java:s390x < none | 1.7.14-2.1 @un uH > 138s Considering librhino-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 138s Re-Instated librhino-java:s390x 138s Broken libhtsjdk-java:s390x Depends on libsnappy-java:s390x < none | 1.1.10.5-1 @un uH > 138s Considering libsnappy-java:s390x 1 as a solution to libhtsjdk-java:s390x 0 138s Re-Instated libsnappy1v5:s390x 138s Re-Instated libsnappy-jni:s390x 138s Re-Instated libsnappy-java:s390x 138s Done 138s Some packages could not be installed. This may mean that you have 138s requested an impossible situation or if you are using the unstable 138s distribution that some required packages have not yet been created 138s or been moved out of Incoming. 138s The following information may help to resolve the situation: 138s 138s The following packages have unmet dependencies: 138s libhtsjdk-java : Depends: libngs-java but it is not installable 138s E: Unable to correct problems, you have held broken packages. 138s run-sample-analysis FAIL badpkg 138s blame: chromhmm 138s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 138s autopkgtest [00:21:30]: @@@@@@@@@@@@@@@@@@@@ summary 138s run-sample-analysis FAIL badpkg 138s blame: chromhmm 138s badpkg: Test dependencies are unsatisfiable. A common reason is that your testbed is out of date with respect to the archive, and you need to use a current testbed or run apt-get update or use -U. 150s Creating nova instance adt-noble-s390x-chromhmm-20240322-001912-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-s390x-server-20240321.img (UUID f7ee8f0f-480f-4014-94f0-3be2a19e259d)...