0s autopkgtest [14:38:01]: starting date and time: 2024-03-26 14:38:01+0000 0s autopkgtest [14:38:01]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [14:38:01]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.fgzecxvv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed --apt-upgrade bppsuite --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=bppsuite/2.4.1-6build2 libbpp-core/2.4.1-11.1 libbpp-phyl/2.4.1-9.1ubuntu1 libbpp-popgen/2.4.1-9.1build1 libbpp-seq/2.4.1-12' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-9.secgroup --name adt-noble-s390x-bppsuite-20240326-143801-juju-7f2275-prod-proposed-migration-environment-3-afc75781-cfbb-44d7-93a1-065b7b480690 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 77s autopkgtest [14:39:18]: testbed dpkg architecture: s390x 77s autopkgtest [14:39:18]: testbed apt version: 2.7.12 77s autopkgtest [14:39:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 78s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB] 78s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B] 78s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 79s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [4017 kB] 81s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [690 kB] 81s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 81s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 81s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 81s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4146 kB] 82s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 82s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [47.8 kB] 82s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 83s Fetched 9590 kB in 5s (2089 kB/s) 83s Reading package lists... 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Calculating upgrade... 85s The following packages will be upgraded: 85s psmisc 85s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 85s Need to get 178 kB of archives. 85s After this operation, 28.7 kB disk space will be freed. 85s Get:1 http://ftpmaster.internal/ubuntu noble/main s390x psmisc s390x 23.7-1 [178 kB] 86s Fetched 178 kB in 0s (474 kB/s) 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 86s Preparing to unpack .../psmisc_23.7-1_s390x.deb ... 86s Unpacking psmisc (23.7-1) over (23.6-2) ... 86s Setting up psmisc (23.7-1) ... 86s Processing triggers for man-db (2.12.0-3) ... 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s 0 upgraded, 0 newly installed, 0 to remove and 243 not upgraded. 87s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 87s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 88s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 88s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 89s Reading package lists... 89s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Calculating upgrade... 89s The following packages were automatically installed and are no longer required: 89s libaio1 libnetplan0 python3-distutils python3-lib2to3 89s Use 'sudo apt autoremove' to remove them. 89s The following packages will be REMOVED: 89s libapt-pkg6.0 libarchive13 libatm1 libcurl3-gnutls libcurl4 libdb5.3 libelf1 89s libext2fs2 libgdbm-compat4 libgdbm6 libglib2.0-0 libgnutls30 libgpgme11 89s libhogweed6 libmagic1 libnettle8 libnpth0 libnvme1 libparted2 libperl5.38 89s libpng16-16 libpsl5 libreadline8 libreiserfscore0 libssl3 libtirpc3 liburcu8 89s libuv1 89s The following NEW packages will be installed: 89s bpfcc-tools bpftrace fontconfig-config fonts-dejavu-core fonts-dejavu-mono 89s hwdata ieee-data libaio1t64 libapt-pkg6.0t64 libarchive13t64 libatm1t64 89s libbpfcc libc-dev-bin libc-devtools libc6-dev libclang-cpp18 libclang1-18 89s libcrypt-dev libcurl3t64-gnutls libcurl4t64 libdb5.3t64 libdeflate0 89s libdw1t64 libelf1t64 libext2fs2t64 libfontconfig1 libfreetype6 libgd3 89s libgdbm-compat4t64 libgdbm6t64 libglib2.0-0t64 libgnutls30t64 libgpgme11t64 89s libhogweed6t64 libjbig0 libjpeg-turbo8 libjpeg8 libllvm18 libmagic1t64 89s libnetplan1 libnettle8t64 libnpth0t64 libnvme1t64 libparted2t64 89s libperl5.38t64 libpng16-16t64 libpsl5t64 libreadline8t64 libreiserfscore0t64 89s libsharpyuv0 libssl3t64 libtiff6 libtirpc3t64 liburcu8t64 libuv1t64 libwebp7 89s libxpm4 linux-headers-6.8.0-20 linux-headers-6.8.0-20-generic 89s linux-image-6.8.0-20-generic linux-libc-dev linux-modules-6.8.0-20-generic 89s linux-modules-extra-6.8.0-20-generic linux-tools-6.8.0-20 89s linux-tools-6.8.0-20-generic linux-tools-common manpages manpages-dev 89s python3-bpfcc python3-netaddr rpcsvc-proto ubuntu-kernel-accessories 89s xdg-user-dirs 89s The following packages have been kept back: 89s s390-tools 89s The following packages will be upgraded: 89s apparmor apt apt-utils base-files bind9-dnsutils bind9-host bind9-libs 89s binutils binutils-common binutils-s390x-linux-gnu bolt bsdextrautils 89s bsdutils btrfs-progs coreutils cryptsetup-bin curl dbus dbus-bin dbus-daemon 89s dbus-session-bus-common dbus-system-bus-common dbus-user-session dhcpcd-base 89s dirmngr dmsetup dpkg dpkg-dev e2fsprogs e2fsprogs-l10n eject fdisk file ftp 89s fwupd gawk gcc-13-base gcc-14-base gir1.2-girepository-2.0 gir1.2-glib-2.0 89s gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm gpgv 89s groff-base ibverbs-providers inetutils-telnet info initramfs-tools 89s initramfs-tools-bin initramfs-tools-core install-info iproute2 jq keyboxd 89s kmod kpartx krb5-locales libapparmor1 libaudit-common libaudit1 libbinutils 89s libblkid1 libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 89s libblockdev-mdraid3 libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 89s libblockdev-utils3 libblockdev3 libbpf1 libbrotli1 libcap-ng0 libcom-err2 89s libcryptsetup12 libctf-nobfd0 libctf0 libdbus-1-3 libdebconfclient0 89s libdevmapper1.02.1 libdpkg-perl libevent-core-2.1-7 libexpat1 libfdisk1 89s libfido2-1 libftdi1-2 libfwupd2 libgcc-s1 libgirepository-1.0-1 89s libglib2.0-data libgssapi-krb5-2 libgudev-1.0-0 libgusb2 libibverbs1 89s libjcat1 libjq1 libjson-glib-1.0-0 libjson-glib-1.0-common libk5crypto3 89s libkmod2 libkrb5-3 libkrb5support0 libldap-common libldap2 89s liblocale-gettext-perl liblzma5 libmagic-mgc libmbim-glib4 libmbim-proxy 89s libmm-glib0 libmount1 libnghttp2-14 libnsl2 libnss-systemd libpam-modules 89s libpam-modules-bin libpam-runtime libpam-systemd libpam0g libplymouth5 89s libpolkit-agent-1-0 libpolkit-gobject-1-0 libproc2-0 libprotobuf-c1 89s libpython3-stdlib libpython3.11-minimal libpython3.11-stdlib 89s libpython3.12-minimal libpython3.12-stdlib libqmi-glib5 libqmi-proxy 89s libqrtr-glib0 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db 89s libseccomp2 libselinux1 libsemanage-common libsemanage2 libsframe1 libslang2 89s libsmartcols1 libsqlite3-0 libss2 libssh-4 libstdc++6 libsystemd-shared 89s libsystemd0 libtext-charwidth-perl libtext-iconv-perl libtirpc-common 89s libudev1 libudisks2-0 libusb-1.0-0 libuuid1 libvolume-key1 libxml2 libxmlb2 89s libxmuu1 linux-generic linux-headers-generic linux-headers-virtual 89s linux-image-generic linux-image-virtual linux-virtual logsave lshw lsof 89s man-db motd-news-config mount mtr-tiny multipath-tools netplan-generator 89s netplan.io openssh-client openssh-server openssh-sftp-server openssl parted 89s perl perl-base perl-modules-5.38 pinentry-curses plymouth 89s plymouth-theme-ubuntu-text procps python-apt-common python3 python3-apt 89s python3-cryptography python3-dbus python3-distutils python3-gdbm python3-gi 89s python3-lib2to3 python3-minimal python3-netplan python3-pkg-resources 89s python3-pyrsistent python3-setuptools python3-typing-extensions python3-yaml 89s python3.11 python3.11-minimal python3.12 python3.12-minimal readline-common 89s rsync rsyslog s390-tools-data shared-mime-info sudo systemd systemd-dev 89s systemd-resolved systemd-sysv systemd-timesyncd tcpdump telnet tnftp 89s ubuntu-pro-client ubuntu-pro-client-l10n udev udisks2 usb.ids util-linux 89s uuid-runtime vim-common vim-tiny wget xxd xz-utils zlib1g 89s 242 upgraded, 73 newly installed, 28 to remove and 1 not upgraded. 89s Need to get 228 MB of archives. 89s After this operation, 524 MB of additional disk space will be used. 89s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main s390x motd-news-config all 13ubuntu8 [5098 B] 90s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main s390x base-files s390x 13ubuntu8 [74.2 kB] 90s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdutils s390x 1:2.39.3-9ubuntu2 [96.1 kB] 90s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbrotli1 s390x 1.1.0-2build1 [375 kB] 90s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgssapi-krb5-2 s390x 1.20.1-6ubuntu1 [149 kB] 90s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5-3 s390x 1.20.1-6ubuntu1 [360 kB] 90s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkrb5support0 s390x 1.20.1-6ubuntu1 [34.6 kB] 90s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libk5crypto3 s390x 1.20.1-6ubuntu1 [90.3 kB] 90s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcom-err2 s390x 1.47.0-2.4~exp1ubuntu2 [22.9 kB] 90s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/main s390x zlib1g s390x 1:1.3.dfsg-3.1ubuntu1 [75.7 kB] 90s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2build6 [58.4 kB] 90s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udisks2 s390x 2.10.1-6 [298 kB] 91s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudisks2-0 s390x 2.10.1-6 [179 kB] 91s Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblkid1 s390x 2.39.3-9ubuntu2 [128 kB] 91s Get:15 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblzma5 s390x 5.6.0-0.2 [137 kB] 91s Get:16 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kmod s390x 31+20240202-2ubuntu4 [107 kB] 91s Get:17 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libkmod2 s390x 31+20240202-2ubuntu4 [56.3 kB] 91s Get:18 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-dev all 255.4-1ubuntu5 [103 kB] 91s Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-timesyncd s390x 255.4-1ubuntu5 [35.3 kB] 91s Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-session-bus-common all 1.14.10-4ubuntu2 [80.3 kB] 91s Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit-common all 1:3.1.2-2.1 [5674 B] 91s Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcap-ng0 s390x 0.8.4-2build1 [15.7 kB] 91s Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libaudit1 s390x 1:3.1.2-2.1 [48.9 kB] 91s Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam0g s390x 1.5.3-5ubuntu3 [69.8 kB] 91s Get:25 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libselinux1 s390x 3.5-2ubuntu1 [84.7 kB] 91s Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl4t64 s390x 8.5.0-2ubuntu8 [363 kB] 91s Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main s390x curl s390x 8.5.0-2ubuntu8 [227 kB] 91s Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpsl5t64 s390x 0.21.2-1.1 [57.6 kB] 91s Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main s390x wget s390x 1.21.4-1ubuntu2 [351 kB] 91s Get:30 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tnftp s390x 20230507-2build1 [107 kB] 91s Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main s390x tcpdump s390x 4.99.4-3ubuntu2 [490 kB] 91s Get:32 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd-shared s390x 255.4-1ubuntu5 [2131 kB] 92s Get:33 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-resolved s390x 255.4-1ubuntu5 [304 kB] 92s Get:34 http://ftpmaster.internal/ubuntu noble-proposed/main s390x sudo s390x 1.9.15p5-3ubuntu3 [968 kB] 92s Get:35 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsync s390x 3.2.7-1build1 [446 kB] 92s Get:36 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-cryptography s390x 41.0.7-4build2 [918 kB] 92s Get:37 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssl s390x 3.0.13-0ubuntu2 [1010 kB] 92s Get:38 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-sftp-server s390x 1:9.6p1-3ubuntu11 [39.0 kB] 92s Get:39 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-client s390x 1:9.6p1-3ubuntu11 [935 kB] 92s Get:40 http://ftpmaster.internal/ubuntu noble-proposed/main s390x openssh-server s390x 1:9.6p1-3ubuntu11 [529 kB] 92s Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssh-4 s390x 0.10.6-2build1 [189 kB] 92s Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules s390x 2.1.28+dfsg1-5ubuntu1 [76.6 kB] 92s Get:43 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12 s390x 3.12.2-4build3 [645 kB] 93s Get:44 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.12-minimal s390x 3.12.2-4build3 [2419 kB] 93s Get:45 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-minimal s390x 3.12.2-4build3 [829 kB] 93s Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libparted2t64 s390x 3.6-3.1build2 [172 kB] 93s Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main s390x parted s390x 3.6-3.1build2 [44.6 kB] 93s Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11 s390x 3.11.8-1build4 [589 kB] 93s Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3.11-minimal s390x 3.11.8-1build4 [2280 kB] 93s Get:50 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-minimal s390x 3.11.8-1build4 [838 kB] 93s Get:51 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.11-stdlib s390x 3.11.8-1build4 [1944 kB] 93s Get:52 http://ftpmaster.internal/ubuntu noble-proposed/main s390x shared-mime-info s390x 2.4-1build1 [474 kB] 93s Get:53 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-girepository-2.0 s390x 1.79.1-1ubuntu6 [24.5 kB] 93s Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gir1.2-glib-2.0 s390x 2.79.3-3ubuntu5 [180 kB] 93s Get:55 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgirepository-1.0-1 s390x 1.79.1-1ubuntu6 [84.0 kB] 93s Get:56 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gi s390x 3.47.0-3build1 [236 kB] 93s Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-dbus s390x 1.3.2-5build2 [100 kB] 93s Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnetplan1 s390x 1.0-1 [123 kB] 93s Get:59 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-netplan s390x 1.0-1 [23.0 kB] 93s Get:60 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan-generator s390x 1.0-1 [59.1 kB] 93s Get:61 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools-bin s390x 0.142ubuntu23 [20.5 kB] 93s Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools-core all 0.142ubuntu23 [50.1 kB] 93s Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main s390x initramfs-tools all 0.142ubuntu23 [9058 B] 93s Get:64 http://ftpmaster.internal/ubuntu noble-proposed/main s390x netplan.io s390x 1.0-1 [65.4 kB] 93s Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmlb2 s390x 0.3.15-1build1 [70.6 kB] 93s Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgpgme11t64 s390x 1.18.0-4.1ubuntu3 [150 kB] 93s Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libvolume-key1 s390x 0.3.12-7build1 [40.8 kB] 93s Get:68 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqrtr-glib0 s390x 1.2.2-1ubuntu3 [17.5 kB] 93s Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-glib5 s390x 1.35.2-0ubuntu1 [918 kB] 93s Get:70 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libqmi-proxy s390x 1.35.2-0ubuntu1 [6122 B] 93s Get:71 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-agent-1-0 s390x 124-1ubuntu1 [17.8 kB] 94s Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpolkit-gobject-1-0 s390x 124-1ubuntu1 [48.3 kB] 94s Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmm-glib0 s390x 1.23.4-0ubuntu1 [251 kB] 94s Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-glib4 s390x 1.31.2-0ubuntu2 [238 kB] 94s Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmbim-proxy s390x 1.31.2-0ubuntu2 [6154 B] 94s Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-common all 1.8.0-2build1 [4210 B] 94s Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjson-glib-1.0-0 s390x 1.8.0-2build1 [68.4 kB] 94s Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgusb2 s390x 0.4.8-1build1 [39.0 kB] 94s Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgudev-1.0-0 s390x 1:238-3ubuntu2 [15.7 kB] 94s Get:80 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libarchive13t64 s390x 3.7.2-1.1ubuntu2 [419 kB] 94s Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fwupd s390x 1.9.15-2 [4435 kB] 94s Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcurl3t64-gnutls s390x 8.5.0-2ubuntu8 [356 kB] 94s Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfwupd2 s390x 1.9.15-2 [136 kB] 94s Get:84 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev3 s390x 3.1.0-1build1 [52.3 kB] 94s Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-utils3 s390x 3.1.0-1build1 [19.2 kB] 94s Get:86 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-swap3 s390x 3.1.0-1build1 [7778 B] 94s Get:87 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-part3 s390x 3.1.0-1build1 [15.4 kB] 94s Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnvme1t64 s390x 1.8-3 [78.7 kB] 94s Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-nvme3 s390x 3.1.0-1build1 [18.3 kB] 94s Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-mdraid3 s390x 3.1.0-1build1 [13.2 kB] 94s Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-loop3 s390x 3.1.0-1build1 [7138 B] 94s Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs-l10n all 1.47.0-2.4~exp1ubuntu2 [5996 B] 94s Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main s390x logsave s390x 1.47.0-2.4~exp1ubuntu2 [22.5 kB] 94s Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libext2fs2t64 s390x 1.47.0-2.4~exp1ubuntu2 [235 kB] 94s Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main s390x e2fsprogs s390x 1.47.0-2.4~exp1ubuntu2 [615 kB] 94s Get:96 http://ftpmaster.internal/ubuntu noble/main s390x libreiserfscore0t64 s390x 1:3.6.27-7.1 [85.5 kB] 94s Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main s390x btrfs-progs s390x 6.6.3-1.1build1 [959 kB] 94s Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-fs3 s390x 3.1.0-1build1 [36.5 kB] 94s Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libblockdev-crypto3 s390x 3.1.0-1build1 [21.6 kB] 94s Get:100 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bolt s390x 0.9.6-2build1 [142 kB] 94s Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-0t64 s390x 2.79.3-3ubuntu5 [1566 kB] 94s Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjcat1 s390x 0.2.0-2build2 [34.4 kB] 94s Get:103 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap2 s390x 2.6.7+dfsg-1~exp1ubuntu6 [202 kB] 94s Get:104 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client-l10n s390x 31.2.2 [19.4 kB] 94s Get:105 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ubuntu-pro-client s390x 31.2.2 [214 kB] 95s Get:106 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-utils s390x 2.4.4-2ubuntu15 [116 kB] 95s Get:107 http://ftpmaster.internal/ubuntu noble-proposed/main s390x keyboxd s390x 2.4.4-2ubuntu15 [83.1 kB] 95s Get:108 http://ftpmaster.internal/ubuntu noble/main s390x libnpth0t64 s390x 1.6-3.1 [8148 B] 95s Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgv s390x 2.4.4-2ubuntu15 [165 kB] 95s Get:110 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-wks-client s390x 2.4.4-2ubuntu15 [76.8 kB] 95s Get:111 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg-agent s390x 2.4.4-2ubuntu15 [240 kB] 95s Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpg s390x 2.4.4-2ubuntu15 [589 kB] 95s Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dirmngr s390x 2.4.4-2ubuntu15 [340 kB] 95s Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg all 2.4.4-2ubuntu15 [359 kB] 95s Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-apt s390x 2.7.7 [171 kB] 95s Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt-utils s390x 2.7.14 [214 kB] 95s Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapt-pkg6.0t64 s390x 2.7.14 [1014 kB] 95s Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnettle8t64 s390x 3.9.1-2.2 [210 kB] 95s Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libhogweed6t64 s390x 3.9.1-2.2 [204 kB] 95s Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgnutls30t64 s390x 3.8.3-1.1ubuntu2 [1044 kB] 95s Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apt s390x 2.7.14 [1390 kB] 95s Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgconf s390x 2.4.4-2ubuntu15 [111 kB] 95s Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gpgsm s390x 2.4.4-2ubuntu15 [244 kB] 95s Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libreadline8t64 s390x 8.2-4 [170 kB] 95s Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gawk s390x 1:5.2.1-2build2 [496 kB] 95s Get:126 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fdisk s390x 2.39.3-9ubuntu2 [124 kB] 95s Get:127 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3.12-stdlib s390x 3.12.2-4build3 [2046 kB] 95s Get:128 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-base s390x 5.38.2-3.2 [1961 kB] 95s Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl-modules-5.38 all 5.38.2-3.2 [3110 kB] 95s Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-gdbm s390x 3.12.2-3ubuntu1.1 [19.0 kB] 95s Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main s390x man-db s390x 2.12.0-3build4 [1246 kB] 95s Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm6t64 s390x 1.23-5.1 [36.4 kB] 95s Get:133 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgdbm-compat4t64 s390x 1.23-5.1 [6880 B] 95s Get:134 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libperl5.38t64 s390x 5.38.2-3.2 [5007 kB] 96s Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main s390x perl s390x 5.38.2-3.2 [231 kB] 96s Get:136 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdb5.3t64 s390x 5.3.28+dfsg2-6 [763 kB] 96s Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-modules-db s390x 2.1.28+dfsg1-5ubuntu1 [21.1 kB] 96s Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsasl2-2 s390x 2.1.28+dfsg1-5ubuntu1 [57.8 kB] 96s Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfido2-1 s390x 1.14.0-1build1 [81.0 kB] 96s Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libcryptsetup12 s390x 2:2.7.0-1ubuntu2 [264 kB] 96s Get:141 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dhcpcd-base s390x 1:10.0.6-1ubuntu2 [217 kB] 96s Get:142 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuv1t64 s390x 1.48.0-1.1 [101 kB] 96s Get:143 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-host s390x 1:9.18.24-0ubuntu3 [50.5 kB] 96s Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-dnsutils s390x 1:9.18.24-0ubuntu3 [162 kB] 96s Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bind9-libs s390x 1:9.18.24-0ubuntu3 [1243 kB] 96s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libssl3t64 s390x 3.0.13-0ubuntu2 [1675 kB] 96s Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnss-systemd s390x 255.4-1ubuntu5 [166 kB] 96s Get:148 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libudev1 s390x 255.4-1ubuntu5 [178 kB] 96s Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd s390x 255.4-1ubuntu5 [3533 kB] 96s Get:150 http://ftpmaster.internal/ubuntu noble-proposed/main s390x udev s390x 255.4-1ubuntu5 [1887 kB] 96s Get:151 http://ftpmaster.internal/ubuntu noble-proposed/main s390x systemd-sysv s390x 255.4-1ubuntu5 [11.9 kB] 96s Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-systemd s390x 255.4-1ubuntu5 [242 kB] 96s Get:153 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsystemd0 s390x 255.4-1ubuntu5 [443 kB] 96s Get:154 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules-bin s390x 1.5.3-5ubuntu3 [57.4 kB] 96s Get:155 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-modules s390x 1.5.3-5ubuntu3 [289 kB] 96s Get:156 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpam-runtime all 1.5.3-5ubuntu3 [40.8 kB] 96s Get:157 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-user-session s390x 1.14.10-4ubuntu2 [9960 B] 96s Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libapparmor1 s390x 4.0.0-beta3-0ubuntu2 [50.8 kB] 96s Get:159 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libexpat1 s390x 2.6.1-2 [94.8 kB] 96s Get:160 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-system-bus-common all 1.14.10-4ubuntu2 [81.5 kB] 96s Get:161 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-bin s390x 1.14.10-4ubuntu2 [41.4 kB] 96s Get:162 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus s390x 1.14.10-4ubuntu2 [24.3 kB] 96s Get:163 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dbus-daemon s390x 1.14.10-4ubuntu2 [118 kB] 96s Get:164 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdbus-1-3 s390x 1.14.10-4ubuntu2 [213 kB] 96s Get:165 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmount1 s390x 2.39.3-9ubuntu2 [138 kB] 96s Get:166 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libseccomp2 s390x 2.5.5-1ubuntu2 [53.4 kB] 96s Get:167 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdevmapper1.02.1 s390x 2:1.02.185-3ubuntu2 [142 kB] 96s Get:168 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libuuid1 s390x 2.39.3-9ubuntu2 [35.6 kB] 96s Get:169 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfdisk1 s390x 2.39.3-9ubuntu2 [151 kB] 96s Get:170 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mount s390x 2.39.3-9ubuntu2 [119 kB] 96s Get:171 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsqlite3-0 s390x 3.45.1-1ubuntu1 [747 kB] 96s Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-14-base s390x 14-20240315-1ubuntu1 [47.0 kB] 96s Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgcc-s1 s390x 14-20240315-1ubuntu1 [35.9 kB] 96s Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libstdc++6 s390x 14-20240315-1ubuntu1 [908 kB] 96s Get:175 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg s390x 1.22.6ubuntu4 [1279 kB] 96s Get:176 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-minimal s390x 3.12.2-0ubuntu1 [27.1 kB] 96s Get:177 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3 s390x 3.12.2-0ubuntu1 [24.1 kB] 96s Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpython3-stdlib s390x 3.12.2-0ubuntu1 [9804 B] 96s Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsmartcols1 s390x 2.39.3-9ubuntu2 [67.9 kB] 96s Get:180 http://ftpmaster.internal/ubuntu noble-proposed/main s390x bsdextrautils s390x 2.39.3-9ubuntu2 [76.3 kB] 96s Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main s390x groff-base s390x 1.23.0-3build1 [1049 kB] 97s Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main s390x pinentry-curses s390x 1.2.1-3ubuntu4 [37.6 kB] 97s Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main s390x readline-common all 8.2-4 [56.4 kB] 97s Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxml2 s390x 2.9.14+dfsg-1.3ubuntu2 [818 kB] 97s Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbpf1 s390x 1:1.3.0-2build1 [176 kB] 97s Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libelf1t64 s390x 0.190-1.1build2 [69.7 kB] 97s Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc-common all 1.3.4+ds-1.1 [8018 B] 97s Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lsof s390x 4.95.0-1build2 [248 kB] 97s Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnsl2 s390x 1.3.0-3build2 [44.1 kB] 97s Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtirpc3t64 s390x 1.3.4+ds-1.1 [85.8 kB] 97s Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main s390x iproute2 s390x 6.1.0-1ubuntu5 [1156 kB] 97s Get:192 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-yaml s390x 6.0.1-2build1 [121 kB] 97s Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libusb-1.0-0 s390x 2:1.0.27-1 [54.8 kB] 97s Get:194 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libprotobuf-c1 s390x 1.4.1-1ubuntu3 [23.4 kB] 97s Get:195 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libnghttp2-14 s390x 1.59.0-1build1 [77.8 kB] 97s Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libproc2-0 s390x 2:4.0.4-4ubuntu2 [60.1 kB] 97s Get:197 http://ftpmaster.internal/ubuntu noble-proposed/main s390x procps s390x 2:4.0.4-4ubuntu2 [724 kB] 97s Get:198 http://ftpmaster.internal/ubuntu noble-proposed/main s390x coreutils s390x 9.4-3ubuntu3 [1482 kB] 97s Get:199 http://ftpmaster.internal/ubuntu noble-proposed/main s390x util-linux s390x 2.39.3-9ubuntu2 [1143 kB] 97s Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main s390x file s390x 1:5.45-3 [22.2 kB] 97s Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic-mgc s390x 1:5.45-3 [305 kB] 97s Get:202 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libmagic1t64 s390x 1:5.45-3 [93.1 kB] 97s Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libplymouth5 s390x 24.004.60-1ubuntu6 [151 kB] 97s Get:204 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libpng16-16t64 s390x 1.6.43-3 [200 kB] 97s Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main s390x multipath-tools s390x 0.9.4-5ubuntu6 [318 kB] 97s Get:206 http://ftpmaster.internal/ubuntu noble/main s390x liburcu8t64 s390x 0.14.0-3.1 [67.3 kB] 97s Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main s390x liblocale-gettext-perl s390x 1.07-6ubuntu4 [15.8 kB] 97s Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main s390x uuid-runtime s390x 2.39.3-9ubuntu2 [33.4 kB] 97s Get:209 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdebconfclient0 s390x 0.271ubuntu2 [11.4 kB] 97s Get:210 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage-common all 3.5-1build4 [10.1 kB] 97s Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsemanage2 s390x 3.5-1build4 [96.7 kB] 97s Get:212 http://ftpmaster.internal/ubuntu noble-proposed/main s390x install-info s390x 7.1-3build1 [64.5 kB] 97s Get:213 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gcc-13-base s390x 13.2.0-21ubuntu1 [48.3 kB] 97s Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libss2 s390x 1.47.0-2.4~exp1ubuntu2 [17.2 kB] 97s Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dmsetup s390x 2:1.02.185-3ubuntu2 [80.4 kB] 97s Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main s390x eject s390x 2.39.3-9ubuntu2 [26.2 kB] 97s Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main s390x krb5-locales all 1.20.1-6ubuntu1 [13.8 kB] 98s Get:218 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libglib2.0-data all 2.79.3-3ubuntu5 [46.6 kB] 98s Get:219 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libslang2 s390x 2.3.3-3build1 [501 kB] 98s Get:220 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-charwidth-perl s390x 0.04-11build2 [9484 B] 98s Get:221 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtext-iconv-perl s390x 1.7-8build2 [13.8 kB] 98s Get:222 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python-apt-common all 2.7.7 [19.8 kB] 98s Get:223 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-setuptools all 68.1.2-2ubuntu1 [396 kB] 98s Get:224 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] 98s Get:225 http://ftpmaster.internal/ubuntu noble-proposed/main s390x rsyslog s390x 8.2312.0-3ubuntu7 [536 kB] 98s Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-tiny s390x 2:9.1.0016-1ubuntu6 [879 kB] 98s Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main s390x vim-common all 2:9.1.0016-1ubuntu6 [385 kB] 98s Get:228 http://ftpmaster.internal/ubuntu noble/main s390x xdg-user-dirs s390x 0.18-1 [18.5 kB] 98s Get:229 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xxd s390x 2:9.1.0016-1ubuntu6 [63.5 kB] 98s Get:230 http://ftpmaster.internal/ubuntu noble-proposed/main s390x apparmor s390x 4.0.0-beta3-0ubuntu2 [710 kB] 98s Get:231 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ftp all 20230507-2build1 [4724 B] 98s Get:232 http://ftpmaster.internal/ubuntu noble-proposed/main s390x inetutils-telnet s390x 2:2.5-3ubuntu3 [105 kB] 98s Get:233 http://ftpmaster.internal/ubuntu noble-proposed/main s390x info s390x 7.1-3build1 [152 kB] 98s Get:234 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxmuu1 s390x 2:1.1.3-3build1 [8860 B] 98s Get:235 http://ftpmaster.internal/ubuntu noble-proposed/main s390x lshw s390x 02.19.git.2021.06.19.996aaad9c7-2build2 [346 kB] 98s Get:236 http://ftpmaster.internal/ubuntu noble/main s390x manpages all 6.05.01-1 [1340 kB] 98s Get:237 http://ftpmaster.internal/ubuntu noble-proposed/main s390x mtr-tiny s390x 0.95-1.1build1 [57.0 kB] 98s Get:238 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth-theme-ubuntu-text s390x 24.004.60-1ubuntu6 [10.2 kB] 98s Get:239 http://ftpmaster.internal/ubuntu noble-proposed/main s390x plymouth s390x 24.004.60-1ubuntu6 [147 kB] 98s Get:240 http://ftpmaster.internal/ubuntu noble-proposed/main s390x telnet all 0.17+2.5-3ubuntu3 [3682 B] 98s Get:241 http://ftpmaster.internal/ubuntu noble-proposed/main s390x usb.ids all 2024.03.18-1 [223 kB] 98s Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main s390x xz-utils s390x 5.6.0-0.2 [274 kB] 98s Get:243 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libctf0 s390x 2.42-4ubuntu1 [98.4 kB] 98s Get:244 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libctf-nobfd0 s390x 2.42-4ubuntu1 [100 kB] 98s Get:245 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils-s390x-linux-gnu s390x 2.42-4ubuntu1 [2270 kB] 98s Get:246 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libbinutils s390x 2.42-4ubuntu1 [477 kB] 98s Get:247 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils s390x 2.42-4ubuntu1 [3056 B] 98s Get:248 http://ftpmaster.internal/ubuntu noble-proposed/main s390x binutils-common s390x 2.42-4ubuntu1 [217 kB] 98s Get:249 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsframe1 s390x 2.42-4ubuntu1 [14.2 kB] 98s Get:250 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libllvm18 s390x 1:18.1.2-1ubuntu2 [33.4 MB] 100s Get:251 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang-cpp18 s390x 1:18.1.2-1ubuntu2 [16.1 MB] 101s Get:252 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpfcc s390x 0.29.1+ds-1ubuntu4 [697 kB] 101s Get:253 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x python3-bpfcc all 0.29.1+ds-1ubuntu4 [40.2 kB] 101s Get:254 http://ftpmaster.internal/ubuntu noble/main s390x ieee-data all 20220827.1 [2113 kB] 101s Get:255 http://ftpmaster.internal/ubuntu noble/main s390x python3-netaddr all 0.8.0-2ubuntu1 [319 kB] 101s Get:256 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpfcc-tools all 0.29.1+ds-1ubuntu4 [687 kB] 101s Get:257 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libclang1-18 s390x 1:18.1.2-1ubuntu2 [9349 kB] 101s Get:258 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdw1t64 s390x 0.190-1.1build2 [286 kB] 101s Get:259 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bpftrace s390x 0.20.2-1ubuntu1 [1139 kB] 101s Get:260 http://ftpmaster.internal/ubuntu noble-proposed/main s390x cryptsetup-bin s390x 2:2.7.0-1ubuntu2 [211 kB] 101s Get:261 http://ftpmaster.internal/ubuntu noble-proposed/main s390x dpkg-dev all 1.22.6ubuntu4 [1074 kB] 101s Get:262 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libdpkg-perl all 1.22.6ubuntu4 [268 kB] 101s Get:263 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 101s Get:264 http://ftpmaster.internal/ubuntu noble/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 101s Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu1 [37.4 kB] 101s Get:266 http://ftpmaster.internal/ubuntu noble-proposed/main s390x gnupg-l10n all 2.4.4-2ubuntu15 [65.8 kB] 101s Get:267 http://ftpmaster.internal/ubuntu noble/main s390x hwdata all 0.379-1 [29.1 kB] 101s Get:268 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libibverbs1 s390x 50.0-2build1 [70.0 kB] 101s Get:269 http://ftpmaster.internal/ubuntu noble-proposed/main s390x ibverbs-providers s390x 50.0-2build1 [408 kB] 101s Get:270 http://ftpmaster.internal/ubuntu noble-proposed/main s390x jq s390x 1.7.1-3 [66.5 kB] 101s Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libjq1 s390x 1.7.1-3 [168 kB] 101s Get:272 http://ftpmaster.internal/ubuntu noble/main s390x libaio1t64 s390x 0.3.113-6 [7290 B] 101s Get:273 http://ftpmaster.internal/ubuntu noble/main s390x libatm1t64 s390x 1:2.5.1-5.1 [24.5 kB] 101s Get:274 http://ftpmaster.internal/ubuntu noble/main s390x libc-dev-bin s390x 2.39-0ubuntu6 [20.2 kB] 101s Get:275 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfreetype6 s390x 2.13.2+dfsg-1build2 [437 kB] 102s Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu1 [150 kB] 102s Get:277 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu1 [128 kB] 102s Get:278 http://ftpmaster.internal/ubuntu noble/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 102s Get:279 http://ftpmaster.internal/ubuntu noble/main s390x libdeflate0 s390x 1.19-1 [46.0 kB] 102s Get:280 http://ftpmaster.internal/ubuntu noble/main s390x libjbig0 s390x 2.1-6.1ubuntu1 [29.8 kB] 102s Get:281 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libsharpyuv0 s390x 1.3.2-0.4build2 [14.9 kB] 102s Get:282 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libwebp7 s390x 1.3.2-0.4build2 [207 kB] 102s Get:283 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu1 [218 kB] 102s Get:284 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libxpm4 s390x 1:3.5.17-1build1 [41.4 kB] 102s Get:285 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libgd3 s390x 2.3.3-9ubuntu3 [141 kB] 102s Get:286 http://ftpmaster.internal/ubuntu noble/main s390x libc-devtools s390x 2.39-0ubuntu6 [30.6 kB] 102s Get:287 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-libc-dev s390x 6.8.0-20.20 [1592 kB] 102s Get:288 http://ftpmaster.internal/ubuntu noble/main s390x libcrypt-dev s390x 1:4.4.36-4 [135 kB] 102s Get:289 http://ftpmaster.internal/ubuntu noble/main s390x rpcsvc-proto s390x 1.4.2-0ubuntu6 [64.7 kB] 102s Get:290 http://ftpmaster.internal/ubuntu noble/main s390x libc6-dev s390x 2.39-0ubuntu6 [1629 kB] 102s Get:291 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libevent-core-2.1-7 s390x 2.1.12-stable-9build1 [94.3 kB] 102s Get:292 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libftdi1-2 s390x 1.5-6build4 [29.3 kB] 102s Get:293 http://ftpmaster.internal/ubuntu noble-proposed/main s390x libldap-common all 2.6.7+dfsg-1~exp1ubuntu6 [31.3 kB] 102s Get:294 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-6.8.0-20-generic s390x 6.8.0-20.20 [21.0 MB] 103s Get:295 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-6.8.0-20-generic s390x 6.8.0-20.20 [9872 kB] 103s Get:296 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-modules-extra-6.8.0-20-generic s390x 6.8.0-20.20 [11.7 MB] 104s Get:297 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-generic s390x 6.8.0-20.20+1 [1734 B] 104s Get:298 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-generic s390x 6.8.0-20.20+1 [9688 B] 104s Get:299 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-virtual s390x 6.8.0-20.20+1 [1682 B] 104s Get:300 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-image-virtual s390x 6.8.0-20.20+1 [9700 B] 104s Get:301 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-virtual s390x 6.8.0-20.20+1 [1642 B] 104s Get:302 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20 all 6.8.0-20.20 [13.6 MB] 105s Get:303 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-6.8.0-20-generic s390x 6.8.0-20.20 [2579 kB] 105s Get:304 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-headers-generic s390x 6.8.0-20.20+1 [9608 B] 105s Get:305 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-common all 6.8.0-20.20 [437 kB] 106s Get:306 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20 s390x 6.8.0-20.20 [2674 kB] 106s Get:307 http://ftpmaster.internal/ubuntu noble-proposed/main s390x linux-tools-6.8.0-20-generic s390x 6.8.0-20.20 [1724 B] 106s Get:308 http://ftpmaster.internal/ubuntu noble/main s390x manpages-dev all 6.05.01-1 [2018 kB] 106s Get:309 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-distutils all 3.12.2-3ubuntu1.1 [133 kB] 106s Get:310 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-lib2to3 all 3.12.2-3ubuntu1.1 [79.1 kB] 106s Get:311 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-pyrsistent s390x 0.20.0-1build1 [55.8 kB] 106s Get:312 http://ftpmaster.internal/ubuntu noble-proposed/main s390x python3-typing-extensions all 4.10.0-1 [60.7 kB] 106s Get:313 http://ftpmaster.internal/ubuntu noble-proposed/main s390x s390-tools-data all 2.31.0-0ubuntu3 [17.8 kB] 106s Get:314 http://ftpmaster.internal/ubuntu noble/main s390x ubuntu-kernel-accessories s390x 1.536build1 [10.5 kB] 106s Get:315 http://ftpmaster.internal/ubuntu noble-proposed/main s390x kpartx s390x 0.9.4-5ubuntu6 [32.8 kB] 107s Preconfiguring packages ... 107s Fetched 228 MB in 17s (13.6 MB/s) 107s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 107s Preparing to unpack .../motd-news-config_13ubuntu8_all.deb ... 107s Unpacking motd-news-config (13ubuntu8) over (13ubuntu7) ... 107s Preparing to unpack .../base-files_13ubuntu8_s390x.deb ... 107s Unpacking base-files (13ubuntu8) over (13ubuntu7) ... 107s Setting up base-files (13ubuntu8) ... 108s motd-news.service is a disabled or a static unit not running, not starting it. 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 108s Preparing to unpack .../bsdutils_1%3a2.39.3-9ubuntu2_s390x.deb ... 108s Unpacking bsdutils (1:2.39.3-9ubuntu2) over (1:2.39.3-6ubuntu2) ... 108s Setting up bsdutils (1:2.39.3-9ubuntu2) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 108s Preparing to unpack .../0-libbrotli1_1.1.0-2build1_s390x.deb ... 108s Unpacking libbrotli1:s390x (1.1.0-2build1) over (1.1.0-2) ... 108s Preparing to unpack .../1-libgssapi-krb5-2_1.20.1-6ubuntu1_s390x.deb ... 108s Unpacking libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 108s Preparing to unpack .../2-libkrb5-3_1.20.1-6ubuntu1_s390x.deb ... 108s Unpacking libkrb5-3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 108s Preparing to unpack .../3-libkrb5support0_1.20.1-6ubuntu1_s390x.deb ... 108s Unpacking libkrb5support0:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 108s Preparing to unpack .../4-libk5crypto3_1.20.1-6ubuntu1_s390x.deb ... 108s Unpacking libk5crypto3:s390x (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 108s Preparing to unpack .../5-libcom-err2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 108s Unpacking libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 108s Preparing to unpack .../6-zlib1g_1%3a1.3.dfsg-3.1ubuntu1_s390x.deb ... 108s Unpacking zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) over (1:1.3.dfsg-3ubuntu1) ... 108s Setting up zlib1g:s390x (1:1.3.dfsg-3.1ubuntu1) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 108s Preparing to unpack .../librtmp1_2.4+20151223.gitfa8646d.1-2build6_s390x.deb ... 108s Unpacking librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) over (2.4+20151223.gitfa8646d.1-2build4) ... 108s Preparing to unpack .../udisks2_2.10.1-6_s390x.deb ... 108s Unpacking udisks2 (2.10.1-6) over (2.10.1-1ubuntu2) ... 108s Preparing to unpack .../libudisks2-0_2.10.1-6_s390x.deb ... 108s Unpacking libudisks2-0:s390x (2.10.1-6) over (2.10.1-1ubuntu2) ... 108s Preparing to unpack .../libblkid1_2.39.3-9ubuntu2_s390x.deb ... 108s Unpacking libblkid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 108s Setting up libblkid1:s390x (2.39.3-9ubuntu2) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 108s Preparing to unpack .../liblzma5_5.6.0-0.2_s390x.deb ... 108s Unpacking liblzma5:s390x (5.6.0-0.2) over (5.4.5-0.3) ... 108s Setting up liblzma5:s390x (5.6.0-0.2) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 108s Preparing to unpack .../0-kmod_31+20240202-2ubuntu4_s390x.deb ... 108s Unpacking kmod (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 108s Preparing to unpack .../1-libkmod2_31+20240202-2ubuntu4_s390x.deb ... 108s Unpacking libkmod2:s390x (31+20240202-2ubuntu4) over (30+20230601-2ubuntu1) ... 108s Preparing to unpack .../2-systemd-dev_255.4-1ubuntu5_all.deb ... 108s Unpacking systemd-dev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 108s Preparing to unpack .../3-systemd-timesyncd_255.4-1ubuntu5_s390x.deb ... 108s Unpacking systemd-timesyncd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 108s Preparing to unpack .../4-dbus-session-bus-common_1.14.10-4ubuntu2_all.deb ... 108s Unpacking dbus-session-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 108s Preparing to unpack .../5-libaudit-common_1%3a3.1.2-2.1_all.deb ... 108s Unpacking libaudit-common (1:3.1.2-2.1) over (1:3.1.2-2) ... 108s Setting up libaudit-common (1:3.1.2-2.1) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 109s Preparing to unpack .../libcap-ng0_0.8.4-2build1_s390x.deb ... 109s Unpacking libcap-ng0:s390x (0.8.4-2build1) over (0.8.4-2) ... 109s Setting up libcap-ng0:s390x (0.8.4-2build1) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 109s Preparing to unpack .../libaudit1_1%3a3.1.2-2.1_s390x.deb ... 109s Unpacking libaudit1:s390x (1:3.1.2-2.1) over (1:3.1.2-2) ... 109s Setting up libaudit1:s390x (1:3.1.2-2.1) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 109s Preparing to unpack .../libpam0g_1.5.3-5ubuntu3_s390x.deb ... 109s Unpacking libpam0g:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 109s Setting up libpam0g:s390x (1.5.3-5ubuntu3) ... 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 109s Preparing to unpack .../libselinux1_3.5-2ubuntu1_s390x.deb ... 109s Unpacking libselinux1:s390x (3.5-2ubuntu1) over (3.5-2build1) ... 109s Setting up libselinux1:s390x (3.5-2ubuntu1) ... 109s dpkg: libcurl4:s390x: dependency problems, but removing anyway as you requested: 109s s390-tools depends on libcurl4 (>= 7.16.2). 109s curl depends on libcurl4 (= 8.5.0-2ubuntu2). 109s 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 109s Removing libcurl4:s390x (8.5.0-2ubuntu2) ... 109s Selecting previously unselected package libcurl4t64:s390x. 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52162 files and directories currently installed.) 109s Preparing to unpack .../libcurl4t64_8.5.0-2ubuntu8_s390x.deb ... 109s Unpacking libcurl4t64:s390x (8.5.0-2ubuntu8) ... 109s Preparing to unpack .../curl_8.5.0-2ubuntu8_s390x.deb ... 109s Unpacking curl (8.5.0-2ubuntu8) over (8.5.0-2ubuntu2) ... 109s dpkg: libpsl5:s390x: dependency problems, but removing anyway as you requested: 109s wget depends on libpsl5 (>= 0.16.0). 109s libcurl3-gnutls:s390x depends on libpsl5 (>= 0.16.0). 109s 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 109s Removing libpsl5:s390x (0.21.2-1build1) ... 109s Selecting previously unselected package libpsl5t64:s390x. 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52163 files and directories currently installed.) 109s Preparing to unpack .../00-libpsl5t64_0.21.2-1.1_s390x.deb ... 109s Unpacking libpsl5t64:s390x (0.21.2-1.1) ... 109s Preparing to unpack .../01-wget_1.21.4-1ubuntu2_s390x.deb ... 109s Unpacking wget (1.21.4-1ubuntu2) over (1.21.4-1ubuntu1) ... 109s Preparing to unpack .../02-tnftp_20230507-2build1_s390x.deb ... 109s Unpacking tnftp (20230507-2build1) over (20230507-2) ... 109s Preparing to unpack .../03-tcpdump_4.99.4-3ubuntu2_s390x.deb ... 109s Unpacking tcpdump (4.99.4-3ubuntu2) over (4.99.4-3ubuntu1) ... 109s Preparing to unpack .../04-libsystemd-shared_255.4-1ubuntu5_s390x.deb ... 109s Unpacking libsystemd-shared:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 109s Preparing to unpack .../05-systemd-resolved_255.4-1ubuntu5_s390x.deb ... 109s Unpacking systemd-resolved (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 109s Preparing to unpack .../06-sudo_1.9.15p5-3ubuntu3_s390x.deb ... 109s Unpacking sudo (1.9.15p5-3ubuntu3) over (1.9.15p5-3ubuntu1) ... 109s Preparing to unpack .../07-rsync_3.2.7-1build1_s390x.deb ... 109s Unpacking rsync (3.2.7-1build1) over (3.2.7-1) ... 109s Preparing to unpack .../08-python3-cryptography_41.0.7-4build2_s390x.deb ... 109s Unpacking python3-cryptography (41.0.7-4build2) over (41.0.7-3) ... 109s Preparing to unpack .../09-openssl_3.0.13-0ubuntu2_s390x.deb ... 109s Unpacking openssl (3.0.13-0ubuntu2) over (3.0.10-1ubuntu4) ... 109s Preparing to unpack .../10-openssh-sftp-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 109s Unpacking openssh-sftp-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 109s Preparing to unpack .../11-openssh-client_1%3a9.6p1-3ubuntu11_s390x.deb ... 109s Unpacking openssh-client (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 109s Preparing to unpack .../12-openssh-server_1%3a9.6p1-3ubuntu11_s390x.deb ... 110s Unpacking openssh-server (1:9.6p1-3ubuntu11) over (1:9.6p1-3ubuntu2) ... 110s Preparing to unpack .../13-libssh-4_0.10.6-2build1_s390x.deb ... 110s Unpacking libssh-4:s390x (0.10.6-2build1) over (0.10.6-2) ... 110s Preparing to unpack .../14-libsasl2-modules_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 110s Unpacking libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 110s Preparing to unpack .../15-python3.12_3.12.2-4build3_s390x.deb ... 110s Unpacking python3.12 (3.12.2-4build3) over (3.12.2-1) ... 110s Preparing to unpack .../16-python3.12-minimal_3.12.2-4build3_s390x.deb ... 110s Unpacking python3.12-minimal (3.12.2-4build3) over (3.12.2-1) ... 110s Preparing to unpack .../17-libpython3.12-minimal_3.12.2-4build3_s390x.deb ... 110s Unpacking libpython3.12-minimal:s390x (3.12.2-4build3) over (3.12.2-1) ... 110s dpkg: libparted2:s390x: dependency problems, but removing anyway as you requested: 110s parted depends on libparted2 (= 3.6-3). 110s 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52169 files and directories currently installed.) 110s Removing libparted2:s390x (3.6-3) ... 110s Selecting previously unselected package libparted2t64:s390x. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52163 files and directories currently installed.) 110s Preparing to unpack .../00-libparted2t64_3.6-3.1build2_s390x.deb ... 110s Unpacking libparted2t64:s390x (3.6-3.1build2) ... 110s Preparing to unpack .../01-parted_3.6-3.1build2_s390x.deb ... 110s Unpacking parted (3.6-3.1build2) over (3.6-3) ... 110s Preparing to unpack .../02-python3.11_3.11.8-1build4_s390x.deb ... 110s Unpacking python3.11 (3.11.8-1build4) over (3.11.8-1) ... 110s Preparing to unpack .../03-python3.11-minimal_3.11.8-1build4_s390x.deb ... 110s Unpacking python3.11-minimal (3.11.8-1build4) over (3.11.8-1) ... 110s Preparing to unpack .../04-libpython3.11-minimal_3.11.8-1build4_s390x.deb ... 110s Unpacking libpython3.11-minimal:s390x (3.11.8-1build4) over (3.11.8-1) ... 110s Preparing to unpack .../05-libpython3.11-stdlib_3.11.8-1build4_s390x.deb ... 110s Unpacking libpython3.11-stdlib:s390x (3.11.8-1build4) over (3.11.8-1) ... 110s Preparing to unpack .../06-shared-mime-info_2.4-1build1_s390x.deb ... 110s Unpacking shared-mime-info (2.4-1build1) over (2.4-1) ... 110s Preparing to unpack .../07-gir1.2-girepository-2.0_1.79.1-1ubuntu6_s390x.deb ... 110s Unpacking gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 111s Preparing to unpack .../08-gir1.2-glib-2.0_2.79.3-3ubuntu5_s390x.deb ... 111s Unpacking gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 111s Preparing to unpack .../09-libgirepository-1.0-1_1.79.1-1ubuntu6_s390x.deb ... 111s Unpacking libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) over (1.79.1-1) ... 111s Preparing to unpack .../10-python3-gi_3.47.0-3build1_s390x.deb ... 111s Unpacking python3-gi (3.47.0-3build1) over (3.47.0-3) ... 111s Preparing to unpack .../11-python3-dbus_1.3.2-5build2_s390x.deb ... 111s Unpacking python3-dbus (1.3.2-5build2) over (1.3.2-5build1) ... 111s Selecting previously unselected package libnetplan1:s390x. 111s Preparing to unpack .../12-libnetplan1_1.0-1_s390x.deb ... 111s Unpacking libnetplan1:s390x (1.0-1) ... 111s Preparing to unpack .../13-python3-netplan_1.0-1_s390x.deb ... 111s Unpacking python3-netplan (1.0-1) over (0.107.1-3) ... 111s Preparing to unpack .../14-netplan-generator_1.0-1_s390x.deb ... 111s Adding 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 111s Unpacking netplan-generator (1.0-1) over (0.107.1-3) ... 111s Preparing to unpack .../15-initramfs-tools-bin_0.142ubuntu23_s390x.deb ... 111s Unpacking initramfs-tools-bin (0.142ubuntu23) over (0.142ubuntu20) ... 111s Preparing to unpack .../16-initramfs-tools-core_0.142ubuntu23_all.deb ... 111s Unpacking initramfs-tools-core (0.142ubuntu23) over (0.142ubuntu20) ... 111s Preparing to unpack .../17-initramfs-tools_0.142ubuntu23_all.deb ... 111s Unpacking initramfs-tools (0.142ubuntu23) over (0.142ubuntu20) ... 111s Preparing to unpack .../18-netplan.io_1.0-1_s390x.deb ... 111s Unpacking netplan.io (1.0-1) over (0.107.1-3) ... 111s Preparing to unpack .../19-libxmlb2_0.3.15-1build1_s390x.deb ... 111s Unpacking libxmlb2:s390x (0.3.15-1build1) over (0.3.15-1) ... 111s dpkg: libgpgme11:s390x: dependency problems, but removing anyway as you requested: 111s libvolume-key1:s390x depends on libgpgme11 (>= 1.4.1). 111s libjcat1:s390x depends on libgpgme11 (>= 1.2.0). 111s 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52172 files and directories currently installed.) 111s Removing libgpgme11:s390x (1.18.0-4ubuntu1) ... 111s Selecting previously unselected package libgpgme11t64:s390x. 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52166 files and directories currently installed.) 111s Preparing to unpack .../00-libgpgme11t64_1.18.0-4.1ubuntu3_s390x.deb ... 111s Unpacking libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 111s Preparing to unpack .../01-libvolume-key1_0.3.12-7build1_s390x.deb ... 111s Unpacking libvolume-key1:s390x (0.3.12-7build1) over (0.3.12-5build2) ... 111s Preparing to unpack .../02-libqrtr-glib0_1.2.2-1ubuntu3_s390x.deb ... 111s Unpacking libqrtr-glib0:s390x (1.2.2-1ubuntu3) over (1.2.2-1ubuntu2) ... 111s Preparing to unpack .../03-libqmi-glib5_1.35.2-0ubuntu1_s390x.deb ... 111s Unpacking libqmi-glib5:s390x (1.35.2-0ubuntu1) over (1.34.0-2) ... 111s Preparing to unpack .../04-libqmi-proxy_1.35.2-0ubuntu1_s390x.deb ... 111s Unpacking libqmi-proxy (1.35.2-0ubuntu1) over (1.34.0-2) ... 111s Preparing to unpack .../05-libpolkit-agent-1-0_124-1ubuntu1_s390x.deb ... 111s Unpacking libpolkit-agent-1-0:s390x (124-1ubuntu1) over (124-1) ... 111s Preparing to unpack .../06-libpolkit-gobject-1-0_124-1ubuntu1_s390x.deb ... 111s Unpacking libpolkit-gobject-1-0:s390x (124-1ubuntu1) over (124-1) ... 111s Preparing to unpack .../07-libmm-glib0_1.23.4-0ubuntu1_s390x.deb ... 111s Unpacking libmm-glib0:s390x (1.23.4-0ubuntu1) over (1.22.0-3) ... 111s Preparing to unpack .../08-libmbim-glib4_1.31.2-0ubuntu2_s390x.deb ... 111s Unpacking libmbim-glib4:s390x (1.31.2-0ubuntu2) over (1.30.0-1) ... 111s Preparing to unpack .../09-libmbim-proxy_1.31.2-0ubuntu2_s390x.deb ... 111s Unpacking libmbim-proxy (1.31.2-0ubuntu2) over (1.30.0-1) ... 111s Preparing to unpack .../10-libjson-glib-1.0-common_1.8.0-2build1_all.deb ... 111s Unpacking libjson-glib-1.0-common (1.8.0-2build1) over (1.8.0-2) ... 111s Preparing to unpack .../11-libjson-glib-1.0-0_1.8.0-2build1_s390x.deb ... 111s Unpacking libjson-glib-1.0-0:s390x (1.8.0-2build1) over (1.8.0-2) ... 111s Preparing to unpack .../12-libgusb2_0.4.8-1build1_s390x.deb ... 111s Unpacking libgusb2:s390x (0.4.8-1build1) over (0.4.8-1) ... 111s Preparing to unpack .../13-libgudev-1.0-0_1%3a238-3ubuntu2_s390x.deb ... 111s Unpacking libgudev-1.0-0:s390x (1:238-3ubuntu2) over (1:238-3) ... 111s dpkg: libarchive13:s390x: dependency problems, but removing anyway as you requested: 111s fwupd depends on libarchive13 (>= 3.2.1). 111s 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52173 files and directories currently installed.) 111s Removing libarchive13:s390x (3.7.2-1ubuntu2) ... 111s Selecting previously unselected package libarchive13t64:s390x. 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 111s Preparing to unpack .../libarchive13t64_3.7.2-1.1ubuntu2_s390x.deb ... 111s Unpacking libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 112s Preparing to unpack .../fwupd_1.9.15-2_s390x.deb ... 112s Unpacking fwupd (1.9.15-2) over (1.9.14-1) ... 112s dpkg: libcurl3-gnutls:s390x: dependency problems, but removing anyway as you requested: 112s libfwupd2:s390x depends on libcurl3-gnutls (>= 7.63.0). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 112s Removing libcurl3-gnutls:s390x (8.5.0-2ubuntu2) ... 112s Selecting previously unselected package libcurl3t64-gnutls:s390x. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 112s Preparing to unpack .../0-libcurl3t64-gnutls_8.5.0-2ubuntu8_s390x.deb ... 112s Unpacking libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 112s Preparing to unpack .../1-libfwupd2_1.9.15-2_s390x.deb ... 112s Unpacking libfwupd2:s390x (1.9.15-2) over (1.9.14-1) ... 112s Preparing to unpack .../2-libblockdev3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../3-libblockdev-utils3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-utils3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../4-libblockdev-swap3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-swap3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../5-libblockdev-part3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-part3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s dpkg: libnvme1: dependency problems, but removing anyway as you requested: 112s libblockdev-nvme3:s390x depends on libnvme1 (>= 1.7.1). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52174 files and directories currently installed.) 112s Removing libnvme1 (1.8-2) ... 112s Selecting previously unselected package libnvme1t64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52167 files and directories currently installed.) 112s Preparing to unpack .../0-libnvme1t64_1.8-3_s390x.deb ... 112s Unpacking libnvme1t64 (1.8-3) ... 112s Preparing to unpack .../1-libblockdev-nvme3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-nvme3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../2-libblockdev-mdraid3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-mdraid3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../3-libblockdev-loop3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-loop3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../4-e2fsprogs-l10n_1.47.0-2.4~exp1ubuntu2_all.deb ... 112s Unpacking e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 112s Preparing to unpack .../5-logsave_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 112s Unpacking logsave (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 112s dpkg: libext2fs2:s390x: dependency problems, but removing anyway as you requested: 112s libblockdev-fs3:s390x depends on libext2fs2 (>= 1.42.11). 112s e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1). 112s btrfs-progs depends on libext2fs2 (>= 1.42). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52175 files and directories currently installed.) 112s Removing libext2fs2:s390x (1.47.0-2ubuntu1) ... 112s Selecting previously unselected package libext2fs2t64:s390x. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52168 files and directories currently installed.) 112s Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 112s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2 to /lib/s390x-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' 112s Adding 'diversion of /lib/s390x-linux-gnu/libe2p.so.2.3 to /lib/s390x-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' 112s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2 to /lib/s390x-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' 112s Adding 'diversion of /lib/s390x-linux-gnu/libext2fs.so.2.4 to /lib/s390x-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' 112s Unpacking libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 112s Setting up libcom-err2:s390x (1.47.0-2.4~exp1ubuntu2) ... 112s Setting up libext2fs2t64:s390x (1.47.0-2.4~exp1ubuntu2) ... 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 112s Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 112s Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 112s dpkg: libreiserfscore0: dependency problems, but removing anyway as you requested: 112s btrfs-progs depends on libreiserfscore0 (>= 1:3.6.27). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 112s Removing libreiserfscore0 (1:3.6.27-7) ... 112s Selecting previously unselected package libreiserfscore0t64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52179 files and directories currently installed.) 112s Preparing to unpack .../libreiserfscore0t64_1%3a3.6.27-7.1_s390x.deb ... 112s Unpacking libreiserfscore0t64 (1:3.6.27-7.1) ... 112s Preparing to unpack .../btrfs-progs_6.6.3-1.1build1_s390x.deb ... 112s Unpacking btrfs-progs (6.6.3-1.1build1) over (6.6.3-1.1) ... 112s Preparing to unpack .../libblockdev-fs3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-fs3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../libblockdev-crypto3_3.1.0-1build1_s390x.deb ... 112s Unpacking libblockdev-crypto3:s390x (3.1.0-1build1) over (3.1.0-1) ... 112s Preparing to unpack .../bolt_0.9.6-2build1_s390x.deb ... 112s Unpacking bolt (0.9.6-2build1) over (0.9.6-2) ... 112s dpkg: libglib2.0-0:s390x: dependency problems, but removing anyway as you requested: 112s s390-tools depends on libglib2.0-0 (>= 2.77.0). 112s libnetplan0:s390x depends on libglib2.0-0 (>= 2.75.3). 112s libjcat1:s390x depends on libglib2.0-0 (>= 2.75.3). 112s 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52185 files and directories currently installed.) 112s Removing libglib2.0-0:s390x (2.79.2-1~ubuntu1) ... 112s Selecting previously unselected package libglib2.0-0t64:s390x. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52160 files and directories currently installed.) 112s Preparing to unpack .../0-libglib2.0-0t64_2.79.3-3ubuntu5_s390x.deb ... 112s libglib2.0-0t64.preinst: Removing /var/lib/dpkg/info/libglib2.0-0:s390x.postrm to avoid loss of /usr/share/glib-2.0/schemas/gschemas.compiled... 112s removed '/var/lib/dpkg/info/libglib2.0-0:s390x.postrm' 112s Unpacking libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 113s Preparing to unpack .../1-libjcat1_0.2.0-2build2_s390x.deb ... 113s Unpacking libjcat1:s390x (0.2.0-2build2) over (0.2.0-2) ... 113s Preparing to unpack .../2-libldap2_2.6.7+dfsg-1~exp1ubuntu6_s390x.deb ... 113s Unpacking libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 113s Preparing to unpack .../3-ubuntu-pro-client-l10n_31.2.2_s390x.deb ... 113s Unpacking ubuntu-pro-client-l10n (31.2.2) over (31.1) ... 113s Preparing to unpack .../4-ubuntu-pro-client_31.2.2_s390x.deb ... 113s Unpacking ubuntu-pro-client (31.2.2) over (31.1) ... 113s Preparing to unpack .../5-gnupg-utils_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking gnupg-utils (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../6-keyboxd_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking keyboxd (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s dpkg: libnpth0:s390x: dependency problems, but removing anyway as you requested: 113s gpgv depends on libnpth0 (>= 0.90). 113s gpgsm depends on libnpth0 (>= 0.90). 113s gpg-agent depends on libnpth0 (>= 0.90). 113s gpg depends on libnpth0 (>= 0.90). 113s dirmngr depends on libnpth0 (>= 0.90). 113s 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52185 files and directories currently installed.) 113s Removing libnpth0:s390x (1.6-3build2) ... 113s Selecting previously unselected package libnpth0t64:s390x. 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52180 files and directories currently installed.) 113s Preparing to unpack .../libnpth0t64_1.6-3.1_s390x.deb ... 113s Unpacking libnpth0t64:s390x (1.6-3.1) ... 113s Setting up libnpth0t64:s390x (1.6-3.1) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52186 files and directories currently installed.) 113s Preparing to unpack .../gpgv_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking gpgv (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Setting up gpgv (2.4.4-2ubuntu15) ... 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52186 files and directories currently installed.) 113s Preparing to unpack .../0-gpg-wks-client_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking gpg-wks-client (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../1-gpg-agent_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking gpg-agent (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../2-gpg_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking gpg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../3-dirmngr_2.4.4-2ubuntu15_s390x.deb ... 113s Unpacking dirmngr (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../4-gnupg_2.4.4-2ubuntu15_all.deb ... 113s Unpacking gnupg (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 113s Preparing to unpack .../5-python3-apt_2.7.7_s390x.deb ... 113s Unpacking python3-apt (2.7.7) over (2.7.6) ... 113s Preparing to unpack .../6-apt-utils_2.7.14_s390x.deb ... 113s Unpacking apt-utils (2.7.14) over (2.7.12) ... 113s dpkg: libapt-pkg6.0:s390x: dependency problems, but removing anyway as you requested: 113s apt depends on libapt-pkg6.0 (>= 2.7.12). 113s 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52184 files and directories currently installed.) 113s Removing libapt-pkg6.0:s390x (2.7.12) ... 113s dpkg: libnettle8:s390x: dependency problems, but removing anyway as you requested: 113s libhogweed6:s390x depends on libnettle8. 113s libgnutls30:s390x depends on libnettle8 (>= 3.9~). 113s 113s Removing libnettle8:s390x (3.9.1-2) ... 113s Selecting previously unselected package libapt-pkg6.0t64:s390x. 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52128 files and directories currently installed.) 113s Preparing to unpack .../libapt-pkg6.0t64_2.7.14_s390x.deb ... 113s Unpacking libapt-pkg6.0t64:s390x (2.7.14) ... 113s Setting up libapt-pkg6.0t64:s390x (2.7.14) ... 113s Selecting previously unselected package libnettle8t64:s390x. 113s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52178 files and directories currently installed.) 113s Preparing to unpack .../libnettle8t64_3.9.1-2.2_s390x.deb ... 113s Unpacking libnettle8t64:s390x (3.9.1-2.2) ... 113s Setting up libnettle8t64:s390x (3.9.1-2.2) ... 113s dpkg: libhogweed6:s390x: dependency problems, but removing anyway as you requested: 113s libgnutls30:s390x depends on libhogweed6 (>= 3.6). 113s 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52186 files and directories currently installed.) 114s Removing libhogweed6:s390x (3.9.1-2) ... 114s Selecting previously unselected package libhogweed6t64:s390x. 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52181 files and directories currently installed.) 114s Preparing to unpack .../libhogweed6t64_3.9.1-2.2_s390x.deb ... 114s Unpacking libhogweed6t64:s390x (3.9.1-2.2) ... 114s Setting up libhogweed6t64:s390x (3.9.1-2.2) ... 114s dpkg: libgnutls30:s390x: dependency problems, but removing anyway as you requested: 114s apt depends on libgnutls30 (>= 3.8.1). 114s 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52187 files and directories currently installed.) 114s Removing libgnutls30:s390x (3.8.3-1ubuntu1) ... 114s Selecting previously unselected package libgnutls30t64:s390x. 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52178 files and directories currently installed.) 114s Preparing to unpack .../libgnutls30t64_3.8.3-1.1ubuntu2_s390x.deb ... 114s Unpacking libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 114s Setting up libgnutls30t64:s390x (3.8.3-1.1ubuntu2) ... 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 114s Preparing to unpack .../archives/apt_2.7.14_s390x.deb ... 114s Unpacking apt (2.7.14) over (2.7.12) ... 114s Setting up apt (2.7.14) ... 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 114s Preparing to unpack .../gpgconf_2.4.4-2ubuntu15_s390x.deb ... 114s Unpacking gpgconf (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 114s Preparing to unpack .../gpgsm_2.4.4-2ubuntu15_s390x.deb ... 114s Unpacking gpgsm (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 114s dpkg: libreadline8:s390x: dependency problems, but removing anyway as you requested: 114s libpython3.12-stdlib:s390x depends on libreadline8 (>= 7.0~beta). 114s gawk depends on libreadline8 (>= 6.0). 114s fdisk depends on libreadline8 (>= 6.0). 114s 114s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 114s Removing libreadline8:s390x (8.2-3) ... 115s Selecting previously unselected package libreadline8t64:s390x. 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52194 files and directories currently installed.) 115s Preparing to unpack .../libreadline8t64_8.2-4_s390x.deb ... 115s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8 to /lib/s390x-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' 115s Adding 'diversion of /lib/s390x-linux-gnu/libhistory.so.8.2 to /lib/s390x-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' 115s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8 to /lib/s390x-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' 115s Adding 'diversion of /lib/s390x-linux-gnu/libreadline.so.8.2 to /lib/s390x-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' 115s Unpacking libreadline8t64:s390x (8.2-4) ... 115s Setting up libreadline8t64:s390x (8.2-4) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52214 files and directories currently installed.) 115s Preparing to unpack .../gawk_1%3a5.2.1-2build2_s390x.deb ... 115s Unpacking gawk (1:5.2.1-2build2) over (1:5.2.1-2) ... 115s Preparing to unpack .../fdisk_2.39.3-9ubuntu2_s390x.deb ... 115s Unpacking fdisk (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 115s Preparing to unpack .../libpython3.12-stdlib_3.12.2-4build3_s390x.deb ... 115s Unpacking libpython3.12-stdlib:s390x (3.12.2-4build3) over (3.12.2-1) ... 115s Preparing to unpack .../perl-base_5.38.2-3.2_s390x.deb ... 115s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ... 115s Setting up perl-base (5.38.2-3.2) ... 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 115s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2_all.deb ... 115s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ... 115s Preparing to unpack .../python3-gdbm_3.12.2-3ubuntu1.1_s390x.deb ... 115s Unpacking python3-gdbm:s390x (3.12.2-3ubuntu1.1) over (3.11.5-1) ... 115s Preparing to unpack .../man-db_2.12.0-3build4_s390x.deb ... 115s Unpacking man-db (2.12.0-3build4) over (2.12.0-3) ... 115s dpkg: libgdbm-compat4:s390x: dependency problems, but removing anyway as you requested: 115s libperl5.38:s390x depends on libgdbm-compat4 (>= 1.18-3). 115s 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52212 files and directories currently installed.) 116s Removing libgdbm-compat4:s390x (1.23-5) ... 116s dpkg: libgdbm6:s390x: dependency problems, but removing anyway as you requested: 116s libperl5.38:s390x depends on libgdbm6 (>= 1.21). 116s 116s Removing libgdbm6:s390x (1.23-5) ... 116s Selecting previously unselected package libgdbm6t64:s390x. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52202 files and directories currently installed.) 116s Preparing to unpack .../libgdbm6t64_1.23-5.1_s390x.deb ... 116s Unpacking libgdbm6t64:s390x (1.23-5.1) ... 116s Selecting previously unselected package libgdbm-compat4t64:s390x. 116s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_s390x.deb ... 116s Unpacking libgdbm-compat4t64:s390x (1.23-5.1) ... 116s dpkg: libperl5.38:s390x: dependency problems, but removing anyway as you requested: 116s perl depends on libperl5.38 (= 5.38.2-3). 116s 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52214 files and directories currently installed.) 116s Removing libperl5.38:s390x (5.38.2-3) ... 116s Selecting previously unselected package libperl5.38t64:s390x. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51692 files and directories currently installed.) 116s Preparing to unpack .../libperl5.38t64_5.38.2-3.2_s390x.deb ... 116s Unpacking libperl5.38t64:s390x (5.38.2-3.2) ... 116s Preparing to unpack .../perl_5.38.2-3.2_s390x.deb ... 116s Unpacking perl (5.38.2-3.2) over (5.38.2-3) ... 116s dpkg: libdb5.3:s390x: dependency problems, but removing anyway as you requested: 116s libsasl2-modules-db:s390x depends on libdb5.3. 116s libpam-modules:s390x depends on libdb5.3. 116s iproute2 depends on libdb5.3. 116s 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52214 files and directories currently installed.) 116s Removing libdb5.3:s390x (5.3.28+dfsg2-4) ... 116s Selecting previously unselected package libdb5.3t64:s390x. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52208 files and directories currently installed.) 116s Preparing to unpack .../0-libdb5.3t64_5.3.28+dfsg2-6_s390x.deb ... 116s Unpacking libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 116s Preparing to unpack .../1-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 116s Unpacking libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 116s Preparing to unpack .../2-libsasl2-2_2.1.28+dfsg1-5ubuntu1_s390x.deb ... 116s Unpacking libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) over (2.1.28+dfsg1-4) ... 116s Preparing to unpack .../3-libfido2-1_1.14.0-1build1_s390x.deb ... 116s Unpacking libfido2-1:s390x (1.14.0-1build1) over (1.14.0-1) ... 116s Preparing to unpack .../4-libcryptsetup12_2%3a2.7.0-1ubuntu2_s390x.deb ... 116s Unpacking libcryptsetup12:s390x (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 116s Preparing to unpack .../5-dhcpcd-base_1%3a10.0.6-1ubuntu2_s390x.deb ... 116s Unpacking dhcpcd-base (1:10.0.6-1ubuntu2) over (1:10.0.6-1ubuntu1) ... 116s dpkg: libuv1:s390x: dependency problems, but removing anyway as you requested: 116s bind9-libs:s390x depends on libuv1 (>= 1.40.0). 116s 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52214 files and directories currently installed.) 116s Removing libuv1:s390x (1.48.0-1) ... 116s Selecting previously unselected package libuv1t64:s390x. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52209 files and directories currently installed.) 116s Preparing to unpack .../libuv1t64_1.48.0-1.1_s390x.deb ... 116s Unpacking libuv1t64:s390x (1.48.0-1.1) ... 116s Preparing to unpack .../bind9-host_1%3a9.18.24-0ubuntu3_s390x.deb ... 116s Unpacking bind9-host (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 116s Preparing to unpack .../bind9-dnsutils_1%3a9.18.24-0ubuntu3_s390x.deb ... 116s Unpacking bind9-dnsutils (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 116s Preparing to unpack .../bind9-libs_1%3a9.18.24-0ubuntu3_s390x.deb ... 116s Unpacking bind9-libs:s390x (1:9.18.24-0ubuntu3) over (1:9.18.21-0ubuntu1) ... 116s dpkg: libssl3:s390x: dependency problems, but removing anyway as you requested: 116s systemd depends on libssl3 (>= 3.0.0). 116s s390-tools depends on libssl3 (>= 3.0.0). 116s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 116s 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 116s Removing libssl3:s390x (3.0.10-1ubuntu4) ... 116s Selecting previously unselected package libssl3t64:s390x. 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52204 files and directories currently installed.) 116s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu2_s390x.deb ... 116s Unpacking libssl3t64:s390x (3.0.13-0ubuntu2) ... 116s Setting up libssl3t64:s390x (3.0.13-0ubuntu2) ... 116s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 116s Preparing to unpack .../libnss-systemd_255.4-1ubuntu5_s390x.deb ... 116s Unpacking libnss-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 117s Preparing to unpack .../libudev1_255.4-1ubuntu5_s390x.deb ... 117s Unpacking libudev1:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 117s Setting up libudev1:s390x (255.4-1ubuntu5) ... 117s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 117s Preparing to unpack .../systemd_255.4-1ubuntu5_s390x.deb ... 117s Unpacking systemd (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 117s Preparing to unpack .../udev_255.4-1ubuntu5_s390x.deb ... 117s Unpacking udev (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 117s Preparing to unpack .../libsystemd0_255.4-1ubuntu5_s390x.deb ... 117s Unpacking libsystemd0:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 117s Setting up libsystemd0:s390x (255.4-1ubuntu5) ... 117s Setting up libcryptsetup12:s390x (2:2.7.0-1ubuntu2) ... 117s Setting up libkmod2:s390x (31+20240202-2ubuntu4) ... 117s Setting up libsystemd-shared:s390x (255.4-1ubuntu5) ... 117s Setting up systemd-dev (255.4-1ubuntu5) ... 117s Setting up systemd (255.4-1ubuntu5) ... 118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 118s Preparing to unpack .../systemd-sysv_255.4-1ubuntu5_s390x.deb ... 118s Unpacking systemd-sysv (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 118s Preparing to unpack .../libpam-systemd_255.4-1ubuntu5_s390x.deb ... 118s Unpacking libpam-systemd:s390x (255.4-1ubuntu5) over (255.2-3ubuntu2) ... 118s Preparing to unpack .../libpam-modules-bin_1.5.3-5ubuntu3_s390x.deb ... 118s Unpacking libpam-modules-bin (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 118s Setting up libpam-modules-bin (1.5.3-5ubuntu3) ... 118s pam_namespace.service is a disabled or a static unit not running, not starting it. 118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 118s Preparing to unpack .../libpam-modules_1.5.3-5ubuntu3_s390x.deb ... 118s Unpacking libpam-modules:s390x (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 118s Setting up libpam-modules:s390x (1.5.3-5ubuntu3) ... 118s Installing new version of config file /etc/security/namespace.init ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libpam-runtime_1.5.3-5ubuntu3_all.deb ... 119s Unpacking libpam-runtime (1.5.3-5ubuntu3) over (1.5.2-9.1ubuntu3) ... 119s Setting up libpam-runtime (1.5.3-5ubuntu3) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../0-dbus-user-session_1.14.10-4ubuntu2_s390x.deb ... 119s Unpacking dbus-user-session (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../1-libapparmor1_4.0.0-beta3-0ubuntu2_s390x.deb ... 119s Unpacking libapparmor1:s390x (4.0.0-beta3-0ubuntu2) over (4.0.0~alpha4-0ubuntu1) ... 119s Preparing to unpack .../2-libexpat1_2.6.1-2_s390x.deb ... 119s Unpacking libexpat1:s390x (2.6.1-2) over (2.6.0-1) ... 119s Preparing to unpack .../3-dbus-system-bus-common_1.14.10-4ubuntu2_all.deb ... 119s Unpacking dbus-system-bus-common (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../4-dbus-bin_1.14.10-4ubuntu2_s390x.deb ... 119s Unpacking dbus-bin (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../5-dbus_1.14.10-4ubuntu2_s390x.deb ... 119s Unpacking dbus (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../6-dbus-daemon_1.14.10-4ubuntu2_s390x.deb ... 119s Unpacking dbus-daemon (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../7-libdbus-1-3_1.14.10-4ubuntu2_s390x.deb ... 119s Unpacking libdbus-1-3:s390x (1.14.10-4ubuntu2) over (1.14.10-4ubuntu1) ... 119s Preparing to unpack .../8-libmount1_2.39.3-9ubuntu2_s390x.deb ... 119s Unpacking libmount1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 119s Setting up libmount1:s390x (2.39.3-9ubuntu2) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libseccomp2_2.5.5-1ubuntu2_s390x.deb ... 119s Unpacking libseccomp2:s390x (2.5.5-1ubuntu2) over (2.5.5-1ubuntu1) ... 119s Setting up libseccomp2:s390x (2.5.5-1ubuntu2) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.185-3ubuntu2_s390x.deb ... 119s Unpacking libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 119s Preparing to unpack .../libuuid1_2.39.3-9ubuntu2_s390x.deb ... 119s Unpacking libuuid1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 119s Setting up libuuid1:s390x (2.39.3-9ubuntu2) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libfdisk1_2.39.3-9ubuntu2_s390x.deb ... 119s Unpacking libfdisk1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 119s Preparing to unpack .../mount_2.39.3-9ubuntu2_s390x.deb ... 119s Unpacking mount (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 119s Preparing to unpack .../libsqlite3-0_3.45.1-1ubuntu1_s390x.deb ... 119s Unpacking libsqlite3-0:s390x (3.45.1-1ubuntu1) over (3.45.1-1) ... 119s Preparing to unpack .../gcc-14-base_14-20240315-1ubuntu1_s390x.deb ... 119s Unpacking gcc-14-base:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 119s Setting up gcc-14-base:s390x (14-20240315-1ubuntu1) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libgcc-s1_14-20240315-1ubuntu1_s390x.deb ... 119s Unpacking libgcc-s1:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 119s Setting up libgcc-s1:s390x (14-20240315-1ubuntu1) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../libstdc++6_14-20240315-1ubuntu1_s390x.deb ... 119s Unpacking libstdc++6:s390x (14-20240315-1ubuntu1) over (14-20240303-1ubuntu1) ... 119s Setting up libstdc++6:s390x (14-20240315-1ubuntu1) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 119s Preparing to unpack .../dpkg_1.22.6ubuntu4_s390x.deb ... 119s Unpacking dpkg (1.22.6ubuntu4) over (1.22.4ubuntu5) ... 119s Setting up dpkg (1.22.6ubuntu4) ... 120s Setting up libpython3.12-minimal:s390x (3.12.2-4build3) ... 120s Setting up libexpat1:s390x (2.6.1-2) ... 120s Setting up python3.12-minimal (3.12.2-4build3) ... 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 121s Preparing to unpack .../python3-minimal_3.12.2-0ubuntu1_s390x.deb ... 121s Unpacking python3-minimal (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 121s Setting up python3-minimal (3.12.2-0ubuntu1) ... 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 121s Preparing to unpack .../python3_3.12.2-0ubuntu1_s390x.deb ... 121s Unpacking python3 (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 121s Preparing to unpack .../libpython3-stdlib_3.12.2-0ubuntu1_s390x.deb ... 121s Unpacking libpython3-stdlib:s390x (3.12.2-0ubuntu1) over (3.12.1-0ubuntu2) ... 121s Preparing to unpack .../libsmartcols1_2.39.3-9ubuntu2_s390x.deb ... 121s Unpacking libsmartcols1:s390x (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 121s Setting up libsmartcols1:s390x (2.39.3-9ubuntu2) ... 121s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52215 files and directories currently installed.) 121s Preparing to unpack .../0-bsdextrautils_2.39.3-9ubuntu2_s390x.deb ... 121s Unpacking bsdextrautils (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 121s Preparing to unpack .../1-groff-base_1.23.0-3build1_s390x.deb ... 121s Unpacking groff-base (1.23.0-3build1) over (1.23.0-3) ... 121s Preparing to unpack .../2-pinentry-curses_1.2.1-3ubuntu4_s390x.deb ... 121s Unpacking pinentry-curses (1.2.1-3ubuntu4) over (1.2.1-3ubuntu1) ... 121s Preparing to unpack .../3-readline-common_8.2-4_all.deb ... 121s Unpacking readline-common (8.2-4) over (8.2-3) ... 121s Preparing to unpack .../4-libxml2_2.9.14+dfsg-1.3ubuntu2_s390x.deb ... 121s Unpacking libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) over (2.9.14+dfsg-1.3ubuntu1) ... 121s Preparing to unpack .../5-libbpf1_1%3a1.3.0-2build1_s390x.deb ... 121s Unpacking libbpf1:s390x (1:1.3.0-2build1) over (1:1.3.0-2) ... 121s dpkg: libelf1:s390x: dependency problems, but removing anyway as you requested: 121s linux-headers-6.8.0-11-generic depends on libelf1 (>= 0.144). 121s iproute2 depends on libelf1 (>= 0.131). 121s 121s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52209 files and directories currently installed.) 122s Preparing to unpack .../0-libtirpc3t64_1.3.4+ds-1.1_s390x.deb ... 122s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3 to /lib/s390x-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' 122s Adding 'diversion of /lib/s390x-linux-gnu/libtirpc.so.3.0.0 to /lib/s390x-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' 122s Unpacking libtirpc3t64:s390x (1.3.4+ds-1.1) ... 122s Preparing to unpack .../1-iproute2_6.1.0-1ubuntu5_s390x.deb ... 122s Unpacking iproute2 (6.1.0-1ubuntu5) over (6.1.0-1ubuntu2) ... 122s Preparing to unpack .../2-python3-yaml_6.0.1-2build1_s390x.deb ... 122s Unpacking python3-yaml (6.0.1-2build1) over (6.0.1-2) ... 122s Preparing to unpack .../3-libusb-1.0-0_2%3a1.0.27-1_s390x.deb ... 122s Unpacking libusb-1.0-0:s390x (2:1.0.27-1) over (2:1.0.26-1) ... 122s Preparing to unpack .../4-libprotobuf-c1_1.4.1-1ubuntu3_s390x.deb ... 122s Unpacking libprotobuf-c1:s390x (1.4.1-1ubuntu3) over (1.4.1-1ubuntu2) ... 122s Preparing to unpack .../5-libnghttp2-14_1.59.0-1build1_s390x.deb ... 122s Unpacking libnghttp2-14:s390x (1.59.0-1build1) over (1.59.0-1) ... 122s Preparing to unpack .../6-libproc2-0_2%3a4.0.4-4ubuntu2_s390x.deb ... 122s Unpacking libproc2-0:s390x (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 122s Preparing to unpack .../7-procps_2%3a4.0.4-4ubuntu2_s390x.deb ... 122s Unpacking procps (2:4.0.4-4ubuntu2) over (2:4.0.4-4ubuntu1) ... 122s Preparing to unpack .../8-coreutils_9.4-3ubuntu3_s390x.deb ... 122s Unpacking coreutils (9.4-3ubuntu3) over (9.4-2ubuntu4) ... 122s Setting up coreutils (9.4-3ubuntu3) ... 122s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52205 files and directories currently installed.) 123s Preparing to unpack .../libmagic-mgc_1%3a5.45-3_s390x.deb ... 123s Unpacking libmagic-mgc (1:5.45-3) over (1:5.45-2) ... 123s Selecting previously unselected package libmagic1t64:s390x. 123s Preparing to unpack .../libmagic1t64_1%3a5.45-3_s390x.deb ... 123s Unpacking libmagic1t64:s390x (1:5.45-3) ... 123s Preparing to unpack .../libplymouth5_24.004.60-1ubuntu6_s390x.deb ... 123s Unpacking libplymouth5:s390x (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 123s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52206 files and directories currently installed.) 123s Preparing to unpack .../libpng16-16t64_1.6.43-3_s390x.deb ... 123s Unpacking libpng16-16t64:s390x (1.6.43-3) ... 123s Preparing to unpack .../multipath-tools_0.9.4-5ubuntu6_s390x.deb ... 123s Unpacking multipath-tools (0.9.4-5ubuntu6) over (0.9.4-5ubuntu3) ... 123s dpkg: liburcu8:s390x: dependency problems, but removing anyway as you requested: 123s xfsprogs depends on liburcu8 (>= 0.13.0). 123s 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52216 files and directories currently installed.) 123s Removing liburcu8:s390x (0.14.0-3) ... 123s Selecting previously unselected package liburcu8t64:s390x. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52197 files and directories currently installed.) 123s Preparing to unpack .../liburcu8t64_0.14.0-3.1_s390x.deb ... 123s Unpacking liburcu8t64:s390x (0.14.0-3.1) ... 123s Preparing to unpack .../liblocale-gettext-perl_1.07-6ubuntu4_s390x.deb ... 123s Unpacking liblocale-gettext-perl (1.07-6ubuntu4) over (1.07-6build1) ... 123s Preparing to unpack .../uuid-runtime_2.39.3-9ubuntu2_s390x.deb ... 123s Unpacking uuid-runtime (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 123s Preparing to unpack .../libdebconfclient0_0.271ubuntu2_s390x.deb ... 123s Unpacking libdebconfclient0:s390x (0.271ubuntu2) over (0.271ubuntu1) ... 123s Setting up libdebconfclient0:s390x (0.271ubuntu2) ... 123s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 123s Preparing to unpack .../libsemanage2_3.5-1build4_s390x.deb ... 123s Unpacking libsemanage2:s390x (3.5-1build4) over (3.5-1build2) ... 123s Setting up libsemanage2:s390x (3.5-1build4) ... 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 123s Preparing to unpack .../install-info_7.1-3build1_s390x.deb ... 123s Unpacking install-info (7.1-3build1) over (7.1-3) ... 124s Setting up install-info (7.1-3build1) ... 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52217 files and directories currently installed.) 124s Preparing to unpack .../000-gcc-13-base_13.2.0-21ubuntu1_s390x.deb ... 124s Unpacking gcc-13-base:s390x (13.2.0-21ubuntu1) over (13.2.0-17ubuntu2) ... 124s Preparing to unpack .../001-libss2_1.47.0-2.4~exp1ubuntu2_s390x.deb ... 124s Unpacking libss2:s390x (1.47.0-2.4~exp1ubuntu2) over (1.47.0-2ubuntu1) ... 124s Preparing to unpack .../002-dmsetup_2%3a1.02.185-3ubuntu2_s390x.deb ... 124s Unpacking dmsetup (2:1.02.185-3ubuntu2) over (2:1.02.185-3ubuntu1) ... 124s Preparing to unpack .../003-eject_2.39.3-9ubuntu2_s390x.deb ... 124s Unpacking eject (2.39.3-9ubuntu2) over (2.39.3-6ubuntu2) ... 124s Preparing to unpack .../004-krb5-locales_1.20.1-6ubuntu1_all.deb ... 124s Unpacking krb5-locales (1.20.1-6ubuntu1) over (1.20.1-5build1) ... 124s Preparing to unpack .../005-libglib2.0-data_2.79.3-3ubuntu5_all.deb ... 124s Unpacking libglib2.0-data (2.79.3-3ubuntu5) over (2.79.2-1~ubuntu1) ... 124s Preparing to unpack .../006-libslang2_2.3.3-3build1_s390x.deb ... 124s Unpacking libslang2:s390x (2.3.3-3build1) over (2.3.3-3) ... 124s Preparing to unpack .../007-libtext-charwidth-perl_0.04-11build2_s390x.deb ... 124s Unpacking libtext-charwidth-perl:s390x (0.04-11build2) over (0.04-11build1) ... 124s Preparing to unpack .../008-libtext-iconv-perl_1.7-8build2_s390x.deb ... 124s Unpacking libtext-iconv-perl:s390x (1.7-8build2) over (1.7-8build1) ... 124s Preparing to unpack .../009-python-apt-common_2.7.7_all.deb ... 124s Unpacking python-apt-common (2.7.7) over (2.7.6) ... 124s Preparing to unpack .../010-python3-setuptools_68.1.2-2ubuntu1_all.deb ... 124s Unpacking python3-setuptools (68.1.2-2ubuntu1) over (68.1.2-2) ... 124s Preparing to unpack .../011-python3-pkg-resources_68.1.2-2ubuntu1_all.deb ... 124s Unpacking python3-pkg-resources (68.1.2-2ubuntu1) over (68.1.2-2) ... 124s Preparing to unpack .../012-rsyslog_8.2312.0-3ubuntu7_s390x.deb ... 124s Unpacking rsyslog (8.2312.0-3ubuntu7) over (8.2312.0-3ubuntu3) ... 124s Preparing to unpack .../013-vim-tiny_2%3a9.1.0016-1ubuntu6_s390x.deb ... 124s Unpacking vim-tiny (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 124s Preparing to unpack .../014-vim-common_2%3a9.1.0016-1ubuntu6_all.deb ... 124s Unpacking vim-common (2:9.1.0016-1ubuntu6) over (2:9.1.0016-1ubuntu2) ... 124s Selecting previously unselected package xdg-user-dirs. 124s Preparing to unpack .../015-xdg-user-dirs_0.18-1_s390x.deb ... 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(02.19.git.2021.06.19.996aaad9c7-2build2) over (02.19.git.2021.06.19.996aaad9c7-2build1) ... 125s Selecting previously unselected package manpages. 125s Preparing to unpack .../023-manpages_6.05.01-1_all.deb ... 125s Unpacking manpages (6.05.01-1) ... 125s Preparing to unpack .../024-mtr-tiny_0.95-1.1build1_s390x.deb ... 125s Unpacking mtr-tiny (0.95-1.1build1) over (0.95-1.1) ... 125s Preparing to unpack .../025-plymouth-theme-ubuntu-text_24.004.60-1ubuntu6_s390x.deb ... 125s Unpacking plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 125s Preparing to unpack .../026-plymouth_24.004.60-1ubuntu6_s390x.deb ... 125s Unpacking plymouth (24.004.60-1ubuntu6) over (24.004.60-1ubuntu3) ... 125s Preparing to unpack .../027-telnet_0.17+2.5-3ubuntu3_all.deb ... 125s Unpacking telnet (0.17+2.5-3ubuntu3) over (0.17+2.5-3ubuntu1) ... 125s Preparing to unpack .../028-usb.ids_2024.03.18-1_all.deb ... 125s Unpacking usb.ids (2024.03.18-1) over (2024.01.30-1) ... 125s Preparing to unpack .../029-xz-utils_5.6.0-0.2_s390x.deb ... 125s Unpacking xz-utils (5.6.0-0.2) over (5.4.5-0.3) ... 125s Preparing to unpack .../030-libctf0_2.42-4ubuntu1_s390x.deb ... 125s Unpacking libctf0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../031-libctf-nobfd0_2.42-4ubuntu1_s390x.deb ... 125s Unpacking libctf-nobfd0:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../032-binutils-s390x-linux-gnu_2.42-4ubuntu1_s390x.deb ... 125s Unpacking binutils-s390x-linux-gnu (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../033-libbinutils_2.42-4ubuntu1_s390x.deb ... 125s Unpacking libbinutils:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../034-binutils_2.42-4ubuntu1_s390x.deb ... 125s Unpacking binutils (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../035-binutils-common_2.42-4ubuntu1_s390x.deb ... 125s Unpacking binutils-common:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Preparing to unpack .../036-libsframe1_2.42-4ubuntu1_s390x.deb ... 125s Unpacking libsframe1:s390x (2.42-4ubuntu1) over (2.42-3ubuntu1) ... 125s Selecting previously unselected package libllvm18:s390x. 125s Preparing to unpack .../037-libllvm18_1%3a18.1.2-1ubuntu2_s390x.deb ... 125s Unpacking libllvm18:s390x (1:18.1.2-1ubuntu2) ... 126s Selecting previously unselected package libclang-cpp18. 126s Preparing to unpack .../038-libclang-cpp18_1%3a18.1.2-1ubuntu2_s390x.deb ... 126s Unpacking libclang-cpp18 (1:18.1.2-1ubuntu2) ... 127s Selecting previously unselected package libbpfcc:s390x. 127s Preparing to unpack .../039-libbpfcc_0.29.1+ds-1ubuntu4_s390x.deb ... 127s Unpacking libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 127s Selecting previously unselected package python3-bpfcc. 127s Preparing to unpack .../040-python3-bpfcc_0.29.1+ds-1ubuntu4_all.deb ... 127s Unpacking python3-bpfcc (0.29.1+ds-1ubuntu4) ... 127s Selecting previously unselected package ieee-data. 127s Preparing to unpack .../041-ieee-data_20220827.1_all.deb ... 127s Unpacking ieee-data (20220827.1) ... 127s Selecting previously unselected package python3-netaddr. 127s Preparing to unpack .../042-python3-netaddr_0.8.0-2ubuntu1_all.deb ... 127s Unpacking python3-netaddr (0.8.0-2ubuntu1) ... 127s Selecting previously unselected package bpfcc-tools. 127s Preparing to unpack .../043-bpfcc-tools_0.29.1+ds-1ubuntu4_all.deb ... 127s Unpacking bpfcc-tools (0.29.1+ds-1ubuntu4) ... 127s Selecting previously unselected package libclang1-18. 127s Preparing to unpack .../044-libclang1-18_1%3a18.1.2-1ubuntu2_s390x.deb ... 127s Unpacking libclang1-18 (1:18.1.2-1ubuntu2) ... 127s Selecting previously unselected package libdw1t64:s390x. 127s Preparing to unpack .../045-libdw1t64_0.190-1.1build2_s390x.deb ... 127s Unpacking libdw1t64:s390x (0.190-1.1build2) ... 127s Selecting previously unselected package bpftrace. 127s Preparing to unpack .../046-bpftrace_0.20.2-1ubuntu1_s390x.deb ... 127s Unpacking bpftrace (0.20.2-1ubuntu1) ... 127s Preparing to unpack .../047-cryptsetup-bin_2%3a2.7.0-1ubuntu2_s390x.deb ... 127s Unpacking cryptsetup-bin (2:2.7.0-1ubuntu2) over (2:2.7.0-1ubuntu1) ... 127s Preparing to unpack .../048-dpkg-dev_1.22.6ubuntu4_all.deb ... 127s Unpacking dpkg-dev (1.22.6ubuntu4) over (1.22.4ubuntu5) ... 128s Preparing to unpack .../049-libdpkg-perl_1.22.6ubuntu4_all.deb ... 128s Unpacking libdpkg-perl (1.22.6ubuntu4) over (1.22.4ubuntu5) ... 128s Selecting previously unselected package fonts-dejavu-mono. 128s Preparing to unpack .../050-fonts-dejavu-mono_2.37-8_all.deb ... 128s Unpacking fonts-dejavu-mono (2.37-8) ... 128s Selecting previously unselected package fonts-dejavu-core. 128s Preparing to unpack .../051-fonts-dejavu-core_2.37-8_all.deb ... 128s Unpacking fonts-dejavu-core (2.37-8) ... 128s Selecting previously unselected package fontconfig-config. 128s Preparing to unpack .../052-fontconfig-config_2.15.0-1.1ubuntu1_s390x.deb ... 128s Unpacking fontconfig-config (2.15.0-1.1ubuntu1) ... 128s Preparing to unpack .../053-gnupg-l10n_2.4.4-2ubuntu15_all.deb ... 128s Unpacking gnupg-l10n (2.4.4-2ubuntu15) over (2.4.4-2ubuntu7) ... 128s Selecting previously unselected package hwdata. 128s Preparing to unpack .../054-hwdata_0.379-1_all.deb ... 128s Unpacking hwdata (0.379-1) ... 128s Preparing to unpack .../055-libibverbs1_50.0-2build1_s390x.deb ... 128s Unpacking libibverbs1:s390x (50.0-2build1) over (50.0-2) ... 128s Preparing to unpack .../056-ibverbs-providers_50.0-2build1_s390x.deb ... 128s Unpacking ibverbs-providers:s390x (50.0-2build1) over (50.0-2) ... 128s Preparing to unpack .../057-jq_1.7.1-3_s390x.deb ... 128s Unpacking jq (1.7.1-3) over (1.7.1-2) ... 128s Preparing to unpack .../058-libjq1_1.7.1-3_s390x.deb ... 128s Unpacking libjq1:s390x (1.7.1-3) over (1.7.1-2) ... 128s Selecting previously unselected package libaio1t64:s390x. 128s Preparing to unpack .../059-libaio1t64_0.3.113-6_s390x.deb ... 128s Unpacking libaio1t64:s390x (0.3.113-6) ... 128s Selecting previously unselected package libatm1t64:s390x. 128s Preparing to unpack .../060-libatm1t64_1%3a2.5.1-5.1_s390x.deb ... 128s Unpacking libatm1t64:s390x (1:2.5.1-5.1) ... 128s Selecting previously unselected package libc-dev-bin. 128s Preparing to unpack .../061-libc-dev-bin_2.39-0ubuntu6_s390x.deb ... 128s Unpacking libc-dev-bin (2.39-0ubuntu6) ... 128s Selecting previously unselected package libfreetype6:s390x. 128s Preparing to unpack .../062-libfreetype6_2.13.2+dfsg-1build2_s390x.deb ... 128s Unpacking libfreetype6:s390x (2.13.2+dfsg-1build2) ... 128s Selecting previously unselected package libfontconfig1:s390x. 128s Preparing to unpack .../063-libfontconfig1_2.15.0-1.1ubuntu1_s390x.deb ... 128s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 128s Selecting previously unselected package libjpeg-turbo8:s390x. 128s Preparing to unpack .../064-libjpeg-turbo8_2.1.5-2ubuntu1_s390x.deb ... 128s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 128s Selecting previously unselected package libjpeg8:s390x. 128s Preparing to unpack .../065-libjpeg8_8c-2ubuntu11_s390x.deb ... 128s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 128s Selecting previously unselected package libdeflate0:s390x. 128s Preparing to unpack .../066-libdeflate0_1.19-1_s390x.deb ... 128s Unpacking libdeflate0:s390x (1.19-1) ... 128s Selecting previously unselected package libjbig0:s390x. 128s Preparing to unpack .../067-libjbig0_2.1-6.1ubuntu1_s390x.deb ... 128s Unpacking libjbig0:s390x (2.1-6.1ubuntu1) ... 128s Selecting previously unselected package libsharpyuv0:s390x. 128s Preparing to unpack .../068-libsharpyuv0_1.3.2-0.4build2_s390x.deb ... 128s Unpacking libsharpyuv0:s390x (1.3.2-0.4build2) ... 128s Selecting previously unselected package libwebp7:s390x. 128s Preparing to unpack .../069-libwebp7_1.3.2-0.4build2_s390x.deb ... 128s Unpacking libwebp7:s390x (1.3.2-0.4build2) ... 128s Selecting previously unselected package libtiff6:s390x. 128s Preparing to unpack .../070-libtiff6_4.5.1+git230720-4ubuntu1_s390x.deb ... 128s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 128s Selecting previously unselected package libxpm4:s390x. 128s Preparing to unpack .../071-libxpm4_1%3a3.5.17-1build1_s390x.deb ... 128s Unpacking libxpm4:s390x (1:3.5.17-1build1) ... 128s Selecting previously unselected package libgd3:s390x. 128s Preparing to unpack .../072-libgd3_2.3.3-9ubuntu3_s390x.deb ... 128s Unpacking libgd3:s390x (2.3.3-9ubuntu3) ... 128s Selecting previously unselected package libc-devtools. 128s Preparing to unpack .../073-libc-devtools_2.39-0ubuntu6_s390x.deb ... 128s Unpacking libc-devtools (2.39-0ubuntu6) ... 128s Selecting previously unselected package linux-libc-dev:s390x. 128s Preparing to unpack .../074-linux-libc-dev_6.8.0-20.20_s390x.deb ... 128s Unpacking linux-libc-dev:s390x (6.8.0-20.20) ... 128s Selecting previously unselected package libcrypt-dev:s390x. 128s Preparing to unpack .../075-libcrypt-dev_1%3a4.4.36-4_s390x.deb ... 128s Unpacking libcrypt-dev:s390x (1:4.4.36-4) ... 128s Selecting previously unselected package rpcsvc-proto. 128s Preparing to unpack .../076-rpcsvc-proto_1.4.2-0ubuntu6_s390x.deb ... 128s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 128s Selecting previously unselected package libc6-dev:s390x. 128s Preparing to unpack .../077-libc6-dev_2.39-0ubuntu6_s390x.deb ... 128s Unpacking libc6-dev:s390x (2.39-0ubuntu6) ... 128s Preparing to unpack .../078-libevent-core-2.1-7_2.1.12-stable-9build1_s390x.deb ... 128s Unpacking libevent-core-2.1-7:s390x (2.1.12-stable-9build1) over (2.1.12-stable-9) ... 128s Preparing to unpack .../079-libftdi1-2_1.5-6build4_s390x.deb ... 128s Unpacking libftdi1-2:s390x (1.5-6build4) over (1.5-6build3) ... 128s Preparing to unpack .../080-libldap-common_2.6.7+dfsg-1~exp1ubuntu6_all.deb ... 128s Unpacking libldap-common (2.6.7+dfsg-1~exp1ubuntu6) over (2.6.7+dfsg-1~exp1ubuntu1) ... 128s Selecting previously unselected package linux-modules-6.8.0-20-generic. 128s Preparing to unpack .../081-linux-modules-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 128s Unpacking linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 129s Selecting previously unselected package linux-image-6.8.0-20-generic. 129s Preparing to unpack .../082-linux-image-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 129s Unpacking linux-image-6.8.0-20-generic (6.8.0-20.20) ... 129s Selecting previously unselected package linux-modules-extra-6.8.0-20-generic. 129s Preparing to unpack .../083-linux-modules-extra-6.8.0-20-generic_6.8.0-20.20_s390x.deb ... 129s Unpacking linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 129s Preparing to unpack .../084-linux-generic_6.8.0-20.20+1_s390x.deb ... 129s Unpacking linux-generic (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 129s Preparing to unpack .../085-linux-image-generic_6.8.0-20.20+1_s390x.deb ... 129s Unpacking linux-image-generic (6.8.0-20.20+1) over (6.8.0-11.11+1) ... 129s Preparing to unpack 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132s Setting up pinentry-curses (1.2.1-3ubuntu4) ... 132s Setting up motd-news-config (13ubuntu8) ... 132s Setting up libtext-iconv-perl:s390x (1.7-8build2) ... 132s Setting up libtext-charwidth-perl:s390x (0.04-11build2) ... 132s Setting up libsharpyuv0:s390x (1.3.2-0.4build2) ... 132s Setting up liburcu8t64:s390x (0.14.0-3.1) ... 132s Setting up tcpdump (4.99.4-3ubuntu2) ... 132s Setting up libibverbs1:s390x (50.0-2build1) ... 132s Setting up systemd-sysv (255.4-1ubuntu5) ... 132s Setting up ubuntu-kernel-accessories (1.536build1) ... 132s Setting up libapparmor1:s390x (4.0.0-beta3-0ubuntu2) ... 132s Setting up libatm1t64:s390x (1:2.5.1-5.1) ... 132s Setting up libgdbm6t64:s390x (1.23-5.1) ... 132s Setting up bsdextrautils (2.39.3-9ubuntu2) ... 132s Setting up libxpm4:s390x (1:3.5.17-1build1) ... 132s Setting up libgdbm-compat4t64:s390x (1.23-5.1) ... 132s Setting up xdg-user-dirs (0.18-1) ... 132s Setting up ibverbs-providers:s390x (50.0-2build1) ... 132s Setting up linux-headers-6.8.0-20 (6.8.0-20.20) ... 132s Setting up libmagic-mgc (1:5.45-3) ... 132s Setting up gawk (1:5.2.1-2build2) ... 132s Setting up libjq1:s390x (1.7.1-3) ... 132s Setting up manpages (6.05.01-1) ... 132s Setting up libtirpc-common (1.3.4+ds-1.1) ... 132s Setting up libbrotli1:s390x (1.1.0-2build1) ... 132s Setting up libsqlite3-0:s390x (3.45.1-1ubuntu1) ... 132s Setting up libsasl2-modules:s390x (2.1.28+dfsg1-5ubuntu1) ... 132s Setting up libuv1t64:s390x (1.48.0-1.1) ... 132s Setting up libmagic1t64:s390x (1:5.45-3) ... 132s Setting up rsyslog (8.2312.0-3ubuntu7) ... 133s info: The user `syslog' is already a member of `adm'. 133s Setting up binutils-common:s390x (2.42-4ubuntu1) ... 133s Setting up libpsl5t64:s390x (0.21.2-1.1) ... 133s Setting up libnghttp2-14:s390x (1.59.0-1build1) ... 133s Setting up libdeflate0:s390x (1.19-1) ... 133s Setting up linux-libc-dev:s390x (6.8.0-20.20) ... 133s Setting up libreiserfscore0t64 (1:3.6.27-7.1) ... 133s Setting up libctf-nobfd0:s390x (2.42-4ubuntu1) ... 133s Setting up libnss-systemd:s390x (255.4-1ubuntu5) ... 133s Setting up krb5-locales (1.20.1-6ubuntu1) ... 133s Setting up file (1:5.45-3) ... 134s Setting up kmod (31+20240202-2ubuntu4) ... 134s Setting up lshw (02.19.git.2021.06.19.996aaad9c7-2build2) ... 134s Setting up libldap-common (2.6.7+dfsg-1~exp1ubuntu6) ... 134s Setting up libprotobuf-c1:s390x (1.4.1-1ubuntu3) ... 134s Setting up libjbig0:s390x (2.1-6.1ubuntu1) ... 134s Setting up xxd (2:9.1.0016-1ubuntu6) ... 134s Setting up libsframe1:s390x (2.42-4ubuntu1) ... 134s Setting up libelf1t64:s390x (0.190-1.1build2) ... 134s Setting up libkrb5support0:s390x (1.20.1-6ubuntu1) ... 134s Setting up libdw1t64:s390x (0.190-1.1build2) ... 134s Setting up linux-headers-6.8.0-20-generic (6.8.0-20.20) ... 134s Setting up eject (2.39.3-9ubuntu2) ... 134s Setting up apparmor (4.0.0-beta3-0ubuntu2) ... 134s Installing new version of config file /etc/apparmor.d/abstractions/authentication ... 134s Installing new version of config file /etc/apparmor.d/abstractions/crypto ... 134s Installing new version of config file /etc/apparmor.d/abstractions/kde-open5 ... 134s Installing new version of config file /etc/apparmor.d/abstractions/openssl ... 134s Installing new version of config file /etc/apparmor.d/code ... 134s Installing new version of config file /etc/apparmor.d/firefox ... 135s Reloading AppArmor profiles 135s Setting up libglib2.0-0t64:s390x (2.79.3-3ubuntu5) ... 135s No schema files found: doing nothing. 135s Setting up libglib2.0-data (2.79.3-3ubuntu5) ... 135s Setting up rpcsvc-proto (1.4.2-0ubuntu6) ... 135s Setting up vim-common (2:9.1.0016-1ubuntu6) ... 135s Setting up gcc-13-base:s390x (13.2.0-21ubuntu1) ... 135s Setting up libqrtr-glib0:s390x (1.2.2-1ubuntu3) ... 135s Setting up libslang2:s390x (2.3.3-3build1) ... 135s Setting up libnvme1t64 (1.8-3) ... 135s Setting up mtr-tiny (0.95-1.1build1) ... 135s Setting up gnupg-l10n (2.4.4-2ubuntu15) ... 135s Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2build6) ... 135s Setting up libdbus-1-3:s390x (1.14.10-4ubuntu2) ... 135s Setting up xz-utils (5.6.0-0.2) ... 135s Setting up perl-modules-5.38 (5.38.2-3.2) ... 135s Setting up libproc2-0:s390x (2:4.0.4-4ubuntu2) ... 135s Setting up libblockdev-utils3:s390x (3.1.0-1build1) ... 135s Setting up fonts-dejavu-mono (2.37-8) ... 135s Setting up libpng16-16t64:s390x (1.6.43-3) ... 135s Setting up systemd-timesyncd (255.4-1ubuntu5) ... 136s Setting up libevent-core-2.1-7:s390x (2.1.12-stable-9build1) ... 136s Setting up udev (255.4-1ubuntu5) ... 136s Setting up libss2:s390x (1.47.0-2.4~exp1ubuntu2) ... 136s Setting up usb.ids (2024.03.18-1) ... 136s Setting up sudo (1.9.15p5-3ubuntu3) ... 136s Setting up fonts-dejavu-core (2.37-8) ... 137s Setting up dhcpcd-base (1:10.0.6-1ubuntu2) ... 137s Setting up gir1.2-glib-2.0:s390x (2.79.3-3ubuntu5) ... 137s Setting up libk5crypto3:s390x (1.20.1-6ubuntu1) ... 137s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu1) ... 137s Setting up logsave (1.47.0-2.4~exp1ubuntu2) ... 137s Setting up libwebp7:s390x (1.3.2-0.4build2) ... 137s Setting up libfdisk1:s390x (2.39.3-9ubuntu2) ... 137s Setting up libdb5.3t64:s390x (5.3.28+dfsg2-6) ... 137s Setting up libblockdev-nvme3:s390x (3.1.0-1build1) ... 137s Setting up libdevmapper1.02.1:s390x (2:1.02.185-3ubuntu2) ... 137s Setting up libblockdev-fs3:s390x (3.1.0-1build1) ... 137s Setting up libaio1t64:s390x (0.3.113-6) ... 137s Setting up python-apt-common (2.7.7) ... 137s Setting up mount (2.39.3-9ubuntu2) ... 137s Setting up dmsetup (2:1.02.185-3ubuntu2) ... 137s Setting up uuid-runtime (2.39.3-9ubuntu2) ... 137s uuidd.service is a disabled or a static unit not running, not starting it. 137s Setting up libmm-glib0:s390x (1.23.4-0ubuntu1) ... 137s Setting up groff-base (1.23.0-3build1) ... 137s Setting up libcrypt-dev:s390x (1:4.4.36-4) ... 137s Setting up libplymouth5:s390x (24.004.60-1ubuntu6) ... 137s Setting up dbus-session-bus-common (1.14.10-4ubuntu2) ... 137s Setting up kpartx (0.9.4-5ubuntu6) ... 137s Setting up jq (1.7.1-3) ... 137s Setting up procps (2:4.0.4-4ubuntu2) ... 138s Setting up gpgconf (2.4.4-2ubuntu15) ... 138s Setting up libgirepository-1.0-1:s390x (1.79.1-1ubuntu6) ... 138s Setting up libjson-glib-1.0-common (1.8.0-2build1) ... 138s Setting up libkrb5-3:s390x (1.20.1-6ubuntu1) ... 138s Setting up libpython3.11-minimal:s390x (3.11.8-1build4) ... 138s Setting up libusb-1.0-0:s390x (2:1.0.27-1) ... 138s Setting up libperl5.38t64:s390x (5.38.2-3.2) ... 138s Setting up tnftp (20230507-2build1) ... 138s Setting up libbinutils:s390x (2.42-4ubuntu1) ... 138s Setting up dbus-system-bus-common (1.14.10-4ubuntu2) ... 138s Setting up libfido2-1:s390x (1.14.0-1build1) ... 138s Setting up libc-dev-bin (2.39-0ubuntu6) ... 138s Setting up openssl (3.0.13-0ubuntu2) ... 138s Setting up linux-modules-6.8.0-20-generic (6.8.0-20.20) ... 138s Setting up readline-common (8.2-4) ... 138s Setting up libxml2:s390x (2.9.14+dfsg-1.3ubuntu2) ... 138s Setting up libxmuu1:s390x (2:1.1.3-3build1) ... 138s Setting up dbus-bin (1.14.10-4ubuntu2) ... 138s Setting up info (7.1-3build1) ... 138s Setting up liblocale-gettext-perl (1.07-6ubuntu4) ... 138s Setting up gpg (2.4.4-2ubuntu15) ... 138s Setting up libgudev-1.0-0:s390x (1:238-3ubuntu2) ... 138s Setting up libpolkit-gobject-1-0:s390x (124-1ubuntu1) ... 138s Setting up libbpf1:s390x (1:1.3.0-2build1) ... 138s Setting up libmbim-glib4:s390x (1.31.2-0ubuntu2) ... 138s Setting up rsync (3.2.7-1build1) ... 139s rsync.service is a disabled or a static unit not running, not starting it. 139s Setting up libudisks2-0:s390x (2.10.1-6) ... 139s Setting up bolt (0.9.6-2build1) ... 139s bolt.service is a disabled or a static unit not running, not starting it. 139s Setting up s390-tools-data (2.31.0-0ubuntu3) ... 139s Setting up libllvm18:s390x (1:18.1.2-1ubuntu2) ... 139s Setting up gnupg-utils (2.4.4-2ubuntu15) ... 139s Setting up initramfs-tools-bin (0.142ubuntu23) ... 139s Setting up libctf0:s390x (2.42-4ubuntu1) ... 139s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 139s Setting up python3.11-minimal (3.11.8-1build4) ... 140s Setting up libclang1-18 (1:18.1.2-1ubuntu2) ... 140s Setting up manpages-dev (6.05.01-1) ... 140s Setting up linux-modules-extra-6.8.0-20-generic (6.8.0-20.20) ... 141s Setting up apt-utils (2.7.14) ... 141s Setting up binutils-s390x-linux-gnu (2.42-4ubuntu1) ... 141s Setting up gpg-agent (2.4.4-2ubuntu15) ... 141s Setting up libpython3.12-stdlib:s390x (3.12.2-4build3) ... 141s Setting up libblockdev-mdraid3:s390x (3.1.0-1build1) ... 141s Setting up wget (1.21.4-1ubuntu2) ... 141s Setting up linux-image-6.8.0-20-generic (6.8.0-20.20) ... 141s I: /boot/vmlinuz is now a symlink to vmlinuz-6.8.0-20-generic 141s I: /boot/initrd.img is now a symlink to initrd.img-6.8.0-20-generic 141s Setting up libblockdev-swap3:s390x (3.1.0-1build1) ... 141s Setting up plymouth (24.004.60-1ubuntu6) ... 141s update-initramfs: Generating /boot/initrd.img-6.8.0-11-generic 141s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 145s Not invoking zipl: initrd doesn't exist yet 145s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 145s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 146s Setting up fontconfig-config (2.15.0-1.1ubuntu1) ... 146s Setting up libxmlb2:s390x (0.3.15-1build1) ... 146s Setting up btrfs-progs (6.6.3-1.1build1) ... 146s Setting up libpython3.11-stdlib:s390x (3.11.8-1build4) ... 146s Setting up python3.12 (3.12.2-4build3) ... 147s Setting up libblockdev-loop3:s390x (3.1.0-1build1) ... 147s Setting up gpgsm (2.4.4-2ubuntu15) ... 147s Setting up inetutils-telnet (2:2.5-3ubuntu3) ... 147s Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu2) ... 147s update-initramfs: deferring update (trigger activated) 148s e2scrub_all.service is a disabled or a static unit not running, not starting it. 148s Setting up libparted2t64:s390x (3.6-3.1build2) ... 148s Setting up linux-headers-generic (6.8.0-20.20+1) ... 148s Setting up dbus-daemon (1.14.10-4ubuntu2) ... 148s Setting up binutils (2.42-4ubuntu1) ... 148s Setting up libmbim-proxy (1.31.2-0ubuntu2) ... 148s Setting up vim-tiny (2:9.1.0016-1ubuntu6) ... 148s Setting up libnetplan1:s390x (1.0-1) ... 148s Setting up man-db (2.12.0-3build4) ... 148s Updating database of manual pages ... 150s man-db.service is a disabled or a static unit not running, not starting it. 150s Setting up libblockdev3:s390x (3.1.0-1build1) ... 150s Setting up fdisk (2.39.3-9ubuntu2) ... 150s Setting up multipath-tools (0.9.4-5ubuntu6) ... 150s Setting up libjson-glib-1.0-0:s390x (1.8.0-2build1) ... 150s Setting up libblockdev-part3:s390x (3.1.0-1build1) ... 150s Setting up libsasl2-modules-db:s390x (2.1.28+dfsg1-5ubuntu1) ... 150s Setting up hwdata (0.379-1) ... 150s Setting up libftdi1-2:s390x (1.5-6build4) ... 150s Setting up perl (5.38.2-3.2) ... 150s Setting up plymouth-theme-ubuntu-text (24.004.60-1ubuntu6) ... 150s update-initramfs: deferring update (trigger activated) 150s Setting up libfreetype6:s390x (2.13.2+dfsg-1build2) ... 150s Setting up gir1.2-girepository-2.0:s390x (1.79.1-1ubuntu6) ... 150s Setting up dbus (1.14.10-4ubuntu2) ... 150s A reboot is required to replace the running dbus-daemon. 150s Please reboot the system when convenient. 151s Setting up shared-mime-info (2.4-1build1) ... 151s Setting up libgssapi-krb5-2:s390x (1.20.1-6ubuntu1) ... 151s Setting up ftp (20230507-2build1) ... 151s Setting up keyboxd (2.4.4-2ubuntu15) ... 151s Setting up libdpkg-perl (1.22.6ubuntu4) ... 151s Setting up libsasl2-2:s390x (2.1.28+dfsg1-5ubuntu1) ... 151s Setting up libssh-4:s390x (0.10.6-2build1) ... 151s Setting up ieee-data (20220827.1) ... 151s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu1) ... 151s Setting up libpam-systemd:s390x (255.4-1ubuntu5) ... 151s Setting up libpolkit-agent-1-0:s390x (124-1ubuntu1) ... 151s Setting up libc6-dev:s390x (2.39-0ubuntu6) ... 151s Setting up libgpgme11t64:s390x (1.18.0-4.1ubuntu3) ... 151s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu1) ... 151s Setting up linux-image-virtual (6.8.0-20.20+1) ... 151s Setting up netplan-generator (1.0-1) ... 151s Removing 'diversion of /lib/systemd/system-generators/netplan to /lib/systemd/system-generators/netplan.usr-is-merged by netplan-generator' 151s Setting up initramfs-tools-core (0.142ubuntu23) ... 151s Setting up libclang-cpp18 (1:18.1.2-1ubuntu2) ... 151s Setting up libbpfcc:s390x (0.29.1+ds-1ubuntu4) ... 151s Setting up linux-tools-common (6.8.0-20.20) ... 151s Setting up libarchive13t64:s390x (3.7.2-1.1ubuntu2) ... 151s Setting up libldap2:s390x (2.6.7+dfsg-1~exp1ubuntu6) ... 151s Setting up libpython3-stdlib:s390x (3.12.2-0ubuntu1) ... 151s Setting up systemd-resolved (255.4-1ubuntu5) ... 152s Setting up python3.11 (3.11.8-1build4) ... 153s Setting up linux-image-generic (6.8.0-20.20+1) ... 153s Setting up telnet (0.17+2.5-3ubuntu3) ... 153s Setting up initramfs-tools (0.142ubuntu23) ... 153s update-initramfs: deferring update (trigger activated) 153s Setting up linux-headers-virtual (6.8.0-20.20+1) ... 153s Setting up linux-generic (6.8.0-20.20+1) ... 153s Setting up libcurl4t64:s390x (8.5.0-2ubuntu8) ... 153s Setting up bpftrace (0.20.2-1ubuntu1) ... 153s Setting up bind9-libs:s390x (1:9.18.24-0ubuntu3) ... 153s Setting up libtirpc3t64:s390x (1.3.4+ds-1.1) ... 153s Setting up e2fsprogs-l10n (1.47.0-2.4~exp1ubuntu2) ... 153s Setting up iproute2 (6.1.0-1ubuntu5) ... 153s Setting up openssh-client (1:9.6p1-3ubuntu11) ... 153s Setting up libgusb2:s390x (0.4.8-1build1) ... 153s Setting up libcurl3t64-gnutls:s390x (8.5.0-2ubuntu8) ... 153s Setting up parted (3.6-3.1build2) ... 153s Setting up libqmi-glib5:s390x (1.35.2-0ubuntu1) ... 153s Setting up linux-tools-6.8.0-20 (6.8.0-20.20) ... 153s Setting up python3 (3.12.2-0ubuntu1) ... 154s Setting up libjcat1:s390x (0.2.0-2build2) ... 154s Setting up dpkg-dev (1.22.6ubuntu4) ... 154s Setting up linux-virtual (6.8.0-20.20+1) ... 154s Setting up dirmngr (2.4.4-2ubuntu15) ... 154s Setting up dbus-user-session (1.14.10-4ubuntu2) ... 154s Setting up linux-tools-6.8.0-20-generic (6.8.0-20.20) ... 154s Setting up python3-cryptography (41.0.7-4build2) ... 154s Setting up python3-gi (3.47.0-3build1) ... 154s Setting up libgd3:s390x (2.3.3-9ubuntu3) ... 154s Setting up python3-typing-extensions (4.10.0-1) ... 154s Setting up lsof (4.95.0-1build2) ... 154s Setting up python3-pyrsistent:s390x (0.20.0-1build1) ... 154s Setting up python3-netaddr (0.8.0-2ubuntu1) ... 155s Setting up libnsl2:s390x (1.3.0-3build2) ... 155s Setting up gnupg (2.4.4-2ubuntu15) ... 155s Setting up python3-netplan (1.0-1) ... 155s Setting up curl (8.5.0-2ubuntu8) ... 155s Setting up libvolume-key1:s390x (0.3.12-7build1) ... 155s Setting up bind9-host (1:9.18.24-0ubuntu3) ... 155s Setting up python3-lib2to3 (3.12.2-3ubuntu1.1) ... 155s Setting up python3-bpfcc (0.29.1+ds-1ubuntu4) ... 155s Setting up libc-devtools (2.39-0ubuntu6) ... 155s Setting up python3-pkg-resources (68.1.2-2ubuntu1) ... 155s Setting up python3-distutils (3.12.2-3ubuntu1.1) ... 155s python3.12: can't get files for byte-compilation 155s Setting up openssh-sftp-server (1:9.6p1-3ubuntu11) ... 155s Setting up python3-dbus (1.3.2-5build2) ... 156s Setting up python3-setuptools (68.1.2-2ubuntu1) ... 156s Setting up gpg-wks-client (2.4.4-2ubuntu15) ... 156s Setting up openssh-server (1:9.6p1-3ubuntu11) ... 156s Replacing config file /etc/ssh/sshd_config with new version 158s Created symlink /etc/systemd/system/ssh.service.requires/ssh.socket → /usr/lib/systemd/system/ssh.socket. 159s Setting up libblockdev-crypto3:s390x (3.1.0-1build1) ... 159s Setting up python3-gdbm:s390x (3.12.2-3ubuntu1.1) ... 159s Setting up python3-apt (2.7.7) ... 159s Setting up libfwupd2:s390x (1.9.15-2) ... 159s Setting up python3-yaml (6.0.1-2build1) ... 159s Setting up libqmi-proxy (1.35.2-0ubuntu1) ... 159s Setting up netplan.io (1.0-1) ... 159s Setting up bpfcc-tools (0.29.1+ds-1ubuntu4) ... 159s Setting up bind9-dnsutils (1:9.18.24-0ubuntu3) ... 159s Setting up ubuntu-pro-client (31.2.2) ... 161s Setting up fwupd (1.9.15-2) ... 161s fwupd-offline-update.service is a disabled or a static unit not running, not starting it. 161s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 161s Setting up ubuntu-pro-client-l10n (31.2.2) ... 161s Setting up udisks2 (2.10.1-6) ... 162s Processing triggers for ufw (0.36.2-5) ... 162s Processing triggers for install-info (7.1-3build1) ... 162s Processing triggers for libc-bin (2.39-0ubuntu6) ... 162s Processing triggers for linux-image-6.8.0-20-generic (6.8.0-20.20) ... 162s /etc/kernel/postinst.d/initramfs-tools: 162s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 162s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 165s Using config file '/etc/zipl.conf' 165s Building bootmap in '/boot' 165s Adding IPL section 'ubuntu' (default) 165s Preparing boot device for LD-IPL: vda (0000). 165s Done. 165s /etc/kernel/postinst.d/zz-zipl: 165s Using config file '/etc/zipl.conf' 165s Building bootmap in '/boot' 165s Adding IPL section 'ubuntu' (default) 165s Preparing boot device for LD-IPL: vda (0000). 165s Done. 165s Processing triggers for initramfs-tools (0.142ubuntu23) ... 165s update-initramfs: Generating /boot/initrd.img-6.8.0-20-generic 165s W: No lz4 in /usr/bin:/sbin:/bin, using gzip 169s Using config file '/etc/zipl.conf' 169s Building bootmap in '/boot' 169s Adding IPL section 'ubuntu' (default) 169s Preparing boot device for LD-IPL: vda (0000). 169s Done. 170s Reading package lists... 170s Building dependency tree... 170s Reading state information... 171s The following packages will be REMOVED: 171s libaio1* libnetplan0* python3-distutils* python3-lib2to3* 171s 0 upgraded, 0 newly installed, 4 to remove and 1 not upgraded. 171s After this operation, 1445 kB disk space will be freed. 171s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81786 files and directories currently installed.) 171s Removing libaio1:s390x (0.3.113-5) ... 171s Removing libnetplan0:s390x (0.107.1-3) ... 171s Removing python3-distutils (3.12.2-3ubuntu1.1) ... 171s Removing python3-lib2to3 (3.12.2-3ubuntu1.1) ... 171s Processing triggers for libc-bin (2.39-0ubuntu6) ... 171s autopkgtest [14:40:52]: rebooting testbed after setup commands that affected boot 200s autopkgtest [14:41:21]: testbed running kernel: Linux 6.8.0-20-generic #20-Ubuntu SMP Mon Mar 18 10:49:25 UTC 2024 203s autopkgtest [14:41:24]: @@@@@@@@@@@@@@@@@@@@ apt-source bppsuite 205s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/universe bppsuite 2.4.1-6build2 (dsc) [2289 B] 205s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe bppsuite 2.4.1-6build2 (tar) [214 kB] 205s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe bppsuite 2.4.1-6build2 (diff) [68.2 kB] 205s gpgv: Signature made Tue Mar 26 10:43:22 2024 UTC 205s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 205s gpgv: Can't check signature: No public key 205s dpkg-source: warning: cannot verify inline signature for ./bppsuite_2.4.1-6build2.dsc: no acceptable signature found 205s autopkgtest [14:41:26]: testing package bppsuite version 2.4.1-6build2 205s autopkgtest [14:41:26]: build not needed 206s autopkgtest [14:41:27]: test run-unit-test: preparing testbed 207s Reading package lists... 207s Building dependency tree... 207s Reading state information... 208s Starting pkgProblemResolver with broken count: 0 208s Starting 2 pkgProblemResolver with broken count: 0 208s Done 208s The following additional packages will be installed: 208s bppsuite bppsuite-examples libbpp-core4t64 libbpp-phyl12t64 208s libbpp-popgen8t64 libbpp-seq12t64 208s The following NEW packages will be installed: 208s autopkgtest-satdep bppsuite bppsuite-examples libbpp-core4t64 208s libbpp-phyl12t64 libbpp-popgen8t64 libbpp-seq12t64 208s 0 upgraded, 7 newly installed, 0 to remove and 1 not upgraded. 208s Need to get 3882 kB/3883 kB of archives. 208s After this operation, 18.2 MB of additional disk space will be used. 208s Get:1 /tmp/autopkgtest.UWXMA5/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [716 B] 208s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpp-core4t64 s390x 2.4.1-11.1 [557 kB] 209s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpp-seq12t64 s390x 2.4.1-12 [437 kB] 209s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpp-phyl12t64 s390x 2.4.1-9.1ubuntu1 [2006 kB] 209s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x libbpp-popgen8t64 s390x 2.4.1-9.1build1 [239 kB] 209s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bppsuite s390x 2.4.1-6build2 [417 kB] 210s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x bppsuite-examples all 2.4.1-6build2 [227 kB] 210s Fetched 3882 kB in 2s (2346 kB/s) 210s Selecting previously unselected package libbpp-core4t64:s390x. 210s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81562 files and directories currently installed.) 210s Preparing to unpack .../0-libbpp-core4t64_2.4.1-11.1_s390x.deb ... 210s Unpacking libbpp-core4t64:s390x (2.4.1-11.1) ... 210s Selecting previously unselected package libbpp-seq12t64:s390x. 210s Preparing to unpack .../1-libbpp-seq12t64_2.4.1-12_s390x.deb ... 210s Unpacking libbpp-seq12t64:s390x (2.4.1-12) ... 210s Selecting previously unselected package libbpp-phyl12t64:s390x. 210s Preparing to unpack .../2-libbpp-phyl12t64_2.4.1-9.1ubuntu1_s390x.deb ... 210s Unpacking libbpp-phyl12t64:s390x (2.4.1-9.1ubuntu1) ... 210s Selecting previously unselected package libbpp-popgen8t64:s390x. 210s Preparing to unpack .../3-libbpp-popgen8t64_2.4.1-9.1build1_s390x.deb ... 210s Unpacking libbpp-popgen8t64:s390x (2.4.1-9.1build1) ... 210s Selecting previously unselected package bppsuite. 210s Preparing to unpack .../4-bppsuite_2.4.1-6build2_s390x.deb ... 210s Unpacking bppsuite (2.4.1-6build2) ... 210s Selecting previously unselected package bppsuite-examples. 210s Preparing to unpack .../5-bppsuite-examples_2.4.1-6build2_all.deb ... 210s Unpacking bppsuite-examples (2.4.1-6build2) ... 210s Selecting previously unselected package autopkgtest-satdep. 210s Preparing to unpack .../6-1-autopkgtest-satdep.deb ... 210s Unpacking autopkgtest-satdep (0) ... 210s Setting up libbpp-core4t64:s390x (2.4.1-11.1) ... 210s Setting up bppsuite-examples (2.4.1-6build2) ... 210s Setting up libbpp-seq12t64:s390x (2.4.1-12) ... 210s Setting up libbpp-phyl12t64:s390x (2.4.1-9.1ubuntu1) ... 210s Setting up libbpp-popgen8t64:s390x (2.4.1-9.1build1) ... 210s Setting up bppsuite (2.4.1-6build2) ... 210s Setting up autopkgtest-satdep (0) ... 210s Processing triggers for man-db (2.12.0-3build4) ... 210s Processing triggers for install-info (7.1-3build1) ... 210s Processing triggers for libc-bin (2.39-0ubuntu6) ... 213s (Reading database ... 81709 files and directories currently installed.) 213s Removing autopkgtest-satdep (0) ... 213s autopkgtest [14:41:34]: test run-unit-test: [----------------------- 214s Test 1 214s ****************************************************************** 214s * Bio++ Maximum Likelihood Computation, version 2.4.0 * 214s * * 214s * Authors: J. Dutheil Last Modif. 19/02/18 * 214s * B. Boussau * 214s * L. Guéguen * 214s * M. Groussin * 214s ****************************************************************** 214s 214s Parsing options: 214s Parsing file ML.bpp for options. 214s Alphabet type .........................: Codon(letter=DNA) 214s Genetic Code...........................: Standard 214s Sequence file .........................: ../../../Data/lysozymeLarge.fasta 214s Sequence format .......................: FASTA file 214s Sites to use...........................: all 214s Remove sites with gaps.................: 214s [ ] 0% [= ] 3% [== ] 6% [=== ] 9% [==== ] 12% [===== ] 15% [======= ] 18% [======== ] 21% [========= ] 24% [========== ] 27% [=========== ] 31% [============ ] 34% [============== ] 37% [=============== ] 40% [================ ] 43% [================= ] 46% [================== ] 49% [==================== ] 52% [===================== ] 55% [====================== ] 58% [======================= ] 62% [======================== ] 65% [========================= ] 68% [=========================== ] 71% [============================ ] 74% [============================= ] 77% [============================== ] 80% [=============================== ] 83% [================================ ] 86% [================================== ] 89% [=================================== ] 93% [==================================== ] 96% [===================================== ] 99% [======================================] 100%Done. 214s Remove Stop Codons.....................: yes 214s Number of sequences....................: 19 214s Number of sites........................: 130 214s Input tree.............................: user 214s Input tree file .......................: ../../../Data/lysozymeLarge.dnd 214s Input tree format .....................: Newick 214s Number of leaves.......................: 19 214s Output tree file ......................: lysozymeLarge.ML.dnd 214s Output tree format ....................: Newick 214s Branch lengths.........................: Input 214s Heterogeneous model....................: one_per_branch 214s StopCodon frequencies distribution ....: quadratic 214s Substitution model.....................: YN98 214s External frequencies initialization for: None 214s Parameter found........................: YN98.kappa=1 214s Parameter found........................: YN98.omega=1 214s Parameter found........................: YN98.123_Full.theta=0.5 214s Parameter found........................: YN98.123_Full.theta1=0.5 214s Parameter found........................: YN98.123_Full.theta2=0.5 214s Distribution...........................: Constant 214s Number of classes......................: 1 214s - Category 0 (Pr = 1) rate.............: 1 214s Rate distribution......................: Constant 214s Number of classes......................: 1 214s Stationarity assumed...................: yes 214s Global parameter.......................: YN98.kappa 214s Global parameter.......................: YN98.123_* 214s Likelihood recursion...................: simple 214s Initializing data structure............: Done. 214s Number of distinct sites...............: 86 214s WARNING!!! Branch length 1 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 9 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 10 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 12 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 22 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 24 is too small: 0. Value is set to 1e-06 214s WARNING!!! Branch length 31 is too small: 0. Value is set to 1e-06 214s Initial log likelihood.................: -1083.53965420421 214s Message handler........................: lysozymeLarge.messages 214s Profiler...............................: lysozymeLarge.profile 214s Max # ML evaluations...................: 10000 214s Tolerance..............................: 1e-06 214s Optimize topology......................: no 214s Optimization method....................: FullD 214s Algorithm used for derivable parameters: Newton 214s Reparametrization......................: no 214s Molecular clock........................: None 368s Optimizing... / 1 Optimizing... - 2 Optimizing... \ 3 Optimizing... - 4 Optimizing... / 5 Optimizing... - 6 Optimizing... \ 7 Optimizing... - 8 Optimizing... / 9 Optimizing... - 10 Optimizing... \ 11 Optimizing... - 12 Optimizing... / 13 Optimizing... - 14 Optimizing... \ 15 Optimizing... - 16 Optimizing... / 17 Optimizing... - 18 Optimizing... \ 19 368s 368s Performed..............................: 20 function evaluations. 368s Output tree file ......................: lysozymeLarge.ML.dnd 368s Output tree format ....................: Newick 368s Log likelihood.........................: -1025.19727691627 368s YN98.kappa_1...........................: 4.53742 368s YN98.omega_1...........................: 0.001 368s YN98.123_Full.theta_1..................: 0.445215 368s YN98.123_Full.theta1_1.................: 0.537621 368s YN98.123_Full.theta2_1.................: 0.580786 368s YN98.omega_2...........................: 0.001 368s YN98.omega_3...........................: 0.195682 368s YN98.omega_4...........................: 999 368s YN98.omega_5...........................: 0.001 368s YN98.omega_6...........................: 0.933468 368s YN98.omega_7...........................: 1.42369 368s YN98.omega_8...........................: 3.70967 368s YN98.omega_9...........................: 0.001 368s YN98.omega_10..........................: 0.001 368s YN98.omega_11..........................: 0.001 368s YN98.omega_12..........................: 999 368s YN98.omega_13..........................: 0.001 368s YN98.omega_14..........................: 999 368s YN98.omega_15..........................: 0.385806 368s YN98.omega_16..........................: 0.001 368s YN98.omega_17..........................: 0.001 368s YN98.omega_18..........................: 999 368s YN98.omega_19..........................: 999 368s YN98.omega_20..........................: 0.475048 368s YN98.omega_21..........................: 1.56053 368s YN98.omega_22..........................: 0.001 368s YN98.omega_23..........................: 0.001 368s YN98.omega_24..........................: 999 368s YN98.omega_25..........................: 0.001 368s YN98.omega_26..........................: 999 368s YN98.omega_27..........................: 0.394757 368s YN98.omega_28..........................: 999 368s YN98.omega_29..........................: 0.640665 368s YN98.omega_30..........................: 0.140303 368s YN98.omega_31..........................: 0.0844713 368s YN98.omega_32..........................: 5.54658 368s YN98.omega_33..........................: 0.38067 368s WARNING!!! This parameter has a value close to the boundary: BrLen1(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen9(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen10(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen12(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen22(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen24(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: BrLen31(1e-06). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_1(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_2(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_4(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_5(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_9(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_10(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_11(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_12(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_13(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_14(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_16(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_17(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_18(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_19(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_22(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_23(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_24(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_25(0.001). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_26(999). 368s WARNING!!! This parameter has a value close to the boundary: YN98.omega_28(999). 368s WARNING!!! Parameter output.estimates.alias not specified. Default used instead: 1 368s Output estimates to file...............: lysozymeLarge.params.txt 368s 368s Posterior rate distribution for dataset: 368s 368s Pr(1.000000) = 1.000000 368s 368s 368s Alignment information logfile..........: lysozymeLarge.infos 368s BppML's done. Bye. 368s Total execution time: 0.000000d, 0.000000h, 2.000000m, 36.000000s. 368s Passed 368s Test 2 368s ****************************************************************** 368s * Bio++ Maximum Likelihood Computation, version 2.4.0 * 368s * * 368s * Authors: J. Dutheil Last Modif. 19/02/18 * 368s * B. Boussau * 368s * L. Guéguen * 368s * M. Groussin * 368s ****************************************************************** 368s 368s Parsing options: 368s Parsing file ML.bpp for options. 368s Alphabet type .........................: Codon(letter=DNA) 368s Genetic Code...........................: Standard 368s Sequence file .........................: ../../../Data/lysozymeLarge.fasta 368s Sequence format .......................: FASTA file 368s Sites to use...........................: all 368s Remove sites with gaps.................: 368s [ ] 0% [= ] 3% [== ] 6% [=== ] 9% [==== ] 12% [===== ] 15% [======= ] 18% [======== ] 21% [========= ] 24% [========== ] 27% [=========== ] 31% [============ ] 34% [============== ] 37% [=============== ] 40% [================ ] 43% [================= ] 46% [================== ] 49% [==================== ] 52% [===================== ] 55% [====================== ] 58% [======================= ] 62% [======================== ] 65% [========================= ] 68% [=========================== ] 71% [============================ ] 74% [============================= ] 77% [============================== ] 80% [=============================== ] 83% [================================ ] 86% [================================== ] 89% [=================================== ] 93% [==================================== ] 96% [===================================== ] 99% [======================================] 100%Done. 368s Remove Stop Codons.....................: yes 368s Number of sequences....................: 19 368s Number of sites........................: 130 368s Input tree.............................: user 368s Input tree file .......................: ../../../Data/lysozymeLarge.dnd 368s Input tree format .....................: Newick 368s Number of leaves.......................: 19 368s Output tree file ......................: lysozymeLarge.ML.dnd 368s Output tree format ....................: Newick 368s Branch lengths.........................: Input 368s Heterogeneous model....................: general 368s Number of distinct models..............: 2 368s StopCodon frequencies distribution ....: quadratic 368s Stationarity assumed...................: yes 368s StopCodon frequencies distribution ....: quadratic 368s Substitution model.....................: YN98 368s Frequencies Initialization for model...: None 368s Parameter found........................: YN98.kappa_1=1 368s Parameter found........................: YN98.omega_1=1 368s WARNING!!! Parameter YN98.123_Full.theta not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta_1=0.5 368s WARNING!!! Parameter YN98.123_Full.theta1 not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta1_1=0.5 368s WARNING!!! Parameter YN98.123_Full.theta2 not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta2_1=0.5 368s Model1 is associated to................: 21 node(s). 368s StopCodon frequencies distribution ....: quadratic 368s Substitution model.....................: YN98 368s Frequencies Initialization for model...: None 368s Parameter found........................: YN98.omega_2=1 368s WARNING!!! Parameter YN98.123_Full.theta not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta_2=0.5 368s WARNING!!! Parameter YN98.123_Full.theta1 not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta1_2=0.5 368s WARNING!!! Parameter YN98.123_Full.theta2 not specified. Default used instead: 0.5 368s Parameter found........................: YN98.123_Full.theta2_2=0.5 368s Model2 is associated to................: 12 node(s). 368s Parameter alias found..................: YN98.kappa_2 -> YN98.kappa_1 = 1 368s Distribution...........................: Constant 368s Number of classes......................: 1 368s - Category 0 (Pr = 1) rate.............: 1 368s Rate distribution......................: Constant 368s Number of classes......................: 1 368s Likelihood recursion...................: simple 368s Initializing data structure............: Done. 368s Number of distinct sites...............: 86 368s WARNING!!! Branch length 1 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 9 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 10 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 12 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 22 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 24 is too small: 0. Value is set to 1e-06 368s WARNING!!! Branch length 31 is too small: 0. Value is set to 1e-06 369s Initial log likelihood.................: -1083.53965420421 369s Message handler........................: lysozymeLarge.messages 369s Profiler...............................: lysozymeLarge.profile 369s Max # ML evaluations...................: 10000 369s Tolerance..............................: 1e-06 369s Optimize topology......................: no 369s Optimization method....................: FullD 369s Algorithm used for derivable parameters: Newton 369s Reparametrization......................: no 369s Molecular clock........................: None 431s Optimizing... / 1 Optimizing... - 2 Optimizing... \ 3 Optimizing... - 4 Optimizing... / 5 Optimizing... - 6 Optimizing... \ 7 Optimizing... - 8 Optimizing... / 9 Optimizing... - 10 Optimizing... \ 11 Optimizing... - 12 Optimizing... / 13 Optimizing... - 14 Optimizing... \ 15 Optimizing... - 16 Optimizing... / 17 Optimizing... - 18 Optimizing... \ 19 Optimizing... - 20 Optimizing... / 21 Optimizing... - 22 431s 431s Performed..............................: 23 function evaluations. 431s Output tree file ......................: lysozymeLarge.ML.dnd 431s Output tree format ....................: Newick 431s Log likelihood.........................: -1042.24079503814 431s YN98.kappa_1...........................: 4.59093 431s YN98.omega_1...........................: 0.781376 431s YN98.123_Full.theta_1..................: 0.441884 431s YN98.123_Full.theta1_1.................: 0.557934 431s YN98.123_Full.theta2_1.................: 0.604597 431s YN98.omega_2...........................: 0.465205 431s YN98.123_Full.theta_2..................: 0.464083 431s YN98.123_Full.theta1_2.................: 0.434315 431s YN98.123_Full.theta2_2.................: 0.455226 431s WARNING!!! This parameter has a value close to the boundary: BrLen1(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen9(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen10(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen12(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen22(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen24(1e-06). 431s WARNING!!! This parameter has a value close to the boundary: BrLen31(1e-06). 431s WARNING!!! Parameter output.estimates.alias not specified. Default used instead: 1 431s Output estimates to file...............: lysozymeLarge.params.txt 431s 431s Posterior rate distribution for dataset: 431s 431s Pr(1.000000) = 1.000000 431s 431s 431s Alignment information logfile..........: lysozymeLarge.infos 431s BppML's done. Bye. 431s Total execution time: 0.000000d, 0.000000h, 1.000000m, 3.000000s. 431s Passed 431s Test 3 431s ****************************************************************** 431s * Bio++ Maximum Likelihood Computation, version 2.4.0 * 431s * * 431s * Authors: J. Dutheil Last Modif. 19/02/18 * 431s * B. Boussau * 431s * L. Guéguen * 431s * M. Groussin * 431s ****************************************************************** 431s 431s Parsing options: 431s Parsing file ML.bpp for options. 431s Alphabet type .........................: Codon(letter=DNA) 431s Genetic Code...........................: Standard 431s Sequence file .........................: ../../../Data/lysozymeLarge.fasta 431s Sequence format .......................: FASTA file 431s Sites to use...........................: all 431s Remove sites with gaps.................: 431s [ ] 0% [= ] 3% [== ] 6% [=== ] 9% [==== ] 12% [===== ] 15% [======= ] 18% [======== ] 21% [========= ] 24% [========== ] 27% [=========== ] 31% [============ ] 34% [============== ] 37% [=============== ] 40% [================ ] 43% [================= ] 46% [================== ] 49% [==================== ] 52% [===================== ] 55% [====================== ] 58% [======================= ] 62% [======================== ] 65% [========================= ] 68% [=========================== ] 71% [============================ ] 74% [============================= ] 77% [============================== ] 80% [=============================== ] 83% [================================ ] 86% [================================== ] 89% [=================================== ] 93% [==================================== ] 96% [===================================== ] 99% [======================================] 100%Done. 431s Remove Stop Codons.....................: yes 431s Number of sequences....................: 19 431s Number of sites........................: 130 431s Input tree.............................: user 431s Input tree file .......................: ../../../Data/lysozymeLarge.dnd 431s Input tree format .....................: Newick 431s Number of leaves.......................: 19 431s Output tree file ......................: lysozymeLarge.ML.dnd 431s Output tree format ....................: Newick 431s Branch lengths.........................: Input 431s Heterogeneous model....................: no 431s Substitution model.....................: YN98 431s External frequencies initialization for: None 431s Parameter found........................: YN98.kappa=1 431s Parameter found........................: YN98.omega=1 431s Distribution...........................: Constant 431s Number of classes......................: 1 431s - Category 0 (Pr = 1) rate.............: 1 431s Rate distribution......................: Constant 431s Number of classes......................: 1 431s Likelihood recursion...................: simple 431s Likelihood data compression............: recursive 431s Initializing data structure............: Done. 431s Number of distinct sites...............: 86 431s WARNING!!! Branch length 1 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 9 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 10 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 12 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 22 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 24 is too small: 0. Value is set to 1e-06 431s WARNING!!! Branch length 31 is too small: 0. Value is set to 1e-06 431s Initial log likelihood.................: -1084.23740828788 431s Message handler........................: lysozymeLarge.messages 431s Profiler...............................: lysozymeLarge.profile 431s Max # ML evaluations...................: 10000 431s Tolerance..............................: 1e-06 431s Optimize topology......................: no 431s Optimization method....................: FullD 431s Algorithm used for derivable parameters: Newton 431s Reparametrization......................: no 431s Molecular clock........................: None 451s Optimizing... / 1 Optimizing... - 2 Optimizing... \ 3 Optimizing... - 4 Optimizing... / 5 Optimizing... - 6 Optimizing... \ 7 Optimizing... - 8 Optimizing... / 9 Optimizing... - 10 Optimizing... \ 11 451s 451s Performed..............................: 12 function evaluations. 451s Output tree file ......................: lysozymeLarge.ML.dnd 451s Output tree format ....................: Newick 451s Log likelihood.........................: -1056.00142355909 451s YN98.kappa.............................: 4.67827 451s YN98.omega.............................: 0.624942 451s WARNING!!! This parameter has a value close to the boundary: BrLen1(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen9(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen10(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen12(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen22(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen24(1e-06). 451s WARNING!!! This parameter has a value close to the boundary: BrLen31(1e-06). 451s WARNING!!! Parameter output.estimates.alias not specified. Default used instead: 1 451s Output estimates to file...............: lysozymeLarge.params.txt 451s 451s Posterior rate distribution for dataset: 451s 451s Pr(1.000000) = 1.000000 451s 451s 451s Alignment information logfile..........: lysozymeLarge.infos 451s BppML's done. Bye. 451s Total execution time: 0.000000d, 0.000000h, 0.000000m, 20.000000s. 451s Passed 451s Test 4 451s ****************************************************************** 451s * Bio++ Maximum Likelihood Computation, version 2.4.0 * 451s * * 451s * Authors: J. Dutheil Last Modif. 19/02/18 * 451s * B. Boussau * 451s * L. Guéguen * 451s * M. Groussin * 451s ****************************************************************** 451s 451s Parsing options: 451s Parsing file ML.bpp for options. 451s Alphabet type .........................: DNA 451s Sequence file .........................: ../../../Data/LSU.phy 451s Sequence format .......................: Phylip file, extended,sequential 451s Sites to use...........................: all 451s Remove sites with gaps.................: 451s [ ] 0% [= ] 2% [== ] 5% [=== ] 7% [==== ] 10% [===== ] 13% [====== ] 15% [======= ] 18% [======== ] 21% [========= ] 23% [========== ] 26% [=========== ] 28% [============ ] 31% [============= ] 34% [============== ] 36% [=============== ] 39% [================ ] 42% [================= ] 44% [================== ] 47% [=================== ] 50% [==================== ] 52% [===================== ] 55% [====================== ] 57% [======================= ] 60% [======================== ] 63% [========================= ] 65% [========================== ] 68% [=========================== ] 71% [============================ ] 73% [============================= ] 76% [============================== ] 79% [=============================== ] 81% [================================ ] 84% [================================= ] 86% [================================== ] 89% [=================================== ] 92% [==================================== ] 94% [===================================== ] 97% [======================================] 100%Done. 451s Number of sequences....................: 79 451s Number of sites........................: 2353 451s Input tree.............................: user 451s Input tree file .......................: ../../../Data/LSU.dnd 451s Input tree format .....................: Newick 451s Number of leaves.......................: 79 451s Output tree file ......................: LSU.ML.dnd 451s Output tree format ....................: Newick 451s Branch lengths.........................: Input 451s Heterogeneous model....................: no 451s Substitution model.....................: HKY85 451s External frequencies initialization for: observed 451s Parameter found........................: HKY85.kappa=2.843 451s Parameter found........................: HKY85.theta=0.532167 451s Parameter found........................: HKY85.theta1=0.57134 451s Parameter found........................: HKY85.theta2=0.584364 451s Distribution...........................: Gamma 451s Number of classes......................: 4 451s Parameter found........................: Gamma.alpha=0.358 451s - Category 0 (Pr = 0.25) rate..........: 0.0111505 451s - Category 1 (Pr = 0.25) rate..........: 0.149763 451s - Category 2 (Pr = 0.25) rate..........: 0.681517 451s - Category 3 (Pr = 0.25) rate..........: 3.15757 451s Rate distribution......................: Gamma 451s Number of classes......................: 4 452s Initializing data structure............: Done. 452s Number of distinct sites...............: 1522 452s Initial log likelihood.................: -65826.8851880443 452s Message handler........................: LSU.messages 452s Profiler...............................: LSU.profile 452s Max # ML evaluations...................: 10000 452s Tolerance..............................: 1e-06 452s Optimize topology......................: yes 452s Optimization method....................: FullD 452s Algorithm used for derivable parameters: Newton 452s Reparametrization......................: no 452s Molecular clock........................: None 453s Trying to perform 5 NNI(s). 454s Current value.......................: 65805.15327 455s Trying to perform 1 NNI(s). 456s Current value.......................: 65803.47083 582s Optimizing... / 1 Optimizing... - 2 Optimizing... \ 3 Optimizing... - 4 Optimizing... / 5 Optimizing... - 6 Optimizing... \ 7 Optimizing... - 8 Optimizing... / 9 Optimizing... - 10 Optimizing... \ 11 Optimizing... - 12 Optimizing... / 13 Optimizing... - 14 Optimizing... \ 15 Optimizing... - 16 Optimizing... / 17 Optimizing... - 18 Optimizing... \ 19 Optimizing... - 20 Optimizing... / 21 Optimizing... - 22 Optimizing... \ 23 Optimizing... - 24 Optimizing... / 25 Optimizing... - 26 Optimizing... \ 27 Optimizing... - 28 582s 582s Performed..............................: 29 function evaluations. 582s Output tree file ......................: LSU.ML.dnd 582s Output tree format ....................: Newick 582s Log likelihood.........................: -65428.4472842493 582s HKY85.kappa............................: 2.63455 582s HKY85.theta............................: 0.494128 582s HKY85.theta1...........................: 0.473663 582s HKY85.theta2...........................: 0.528379 582s Gamma.alpha............................: 0.437628 582s WARNING!!! Parameter output.estimates.alias not specified. Default used instead: 1 582s Output estimates to file...............: LSU.params.txt 582s 582s Posterior rate distribution for dataset: 582s 582s Pr(0.022496) = 0.328517 582s Pr(0.209264) = 0.217595 582s Pr(0.768987) = 0.240969 582s Pr(2.999253) = 0.212920 582s 582s 582s Alignment information logfile..........: LSU.infos 583s BppML's done. Bye. 583s Total execution time: 0.000000d, 0.000000h, 2.000000m, 11.000000s. 583s Passed 583s Test 5 583s ****************************************************************** 583s * Bio++ Maximum Likelihood Computation, version 2.4.0 * 583s * * 583s * Authors: J. Dutheil Last Modif. 19/02/18 * 583s * B. Boussau * 583s * L. Guéguen * 583s * M. Groussin * 583s ****************************************************************** 583s 583s Parsing options: 583s Parsing file ML.bpp for options. 583s Alphabet type .........................: Proteic 583s Sequence file .........................: ../../../Data/Myo.mase 583s Sequence format .......................: MASE file 583s Sites to use...........................: all 583s Remove sites with gaps.................: 583s [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [ ] 0% [= ] 2% [== ] 5% [=== ] 8% [==== ] 11% [===== ] 14% [====== ] 16% [======= ] 20% [======== ] 23% [========= ] 26% [=========== ] 29% [============ ] 31% [============ ] 31% [============ ] 31% [============ ] 31% [============ ] 31% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 32% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 33% [============ ] 34% [============ ] 34% [============= ] 34% [============= ] 34% [============= ] 34% [============= ] 34% [============== ] 37% [=============== ] 40% [================ ] 43% [================= ] 46% [================== ] 49% [================== ] 49% [================== ] 49% [=================== ] 50% [=================== ] 50% [======================================] 100%Done. 583s Number of sequences....................: 100 583s Number of sites........................: 153 583s Input tree.............................: user 583s Input tree file .......................: ../../../Data/Myo.dnd 583s Input tree format .....................: Newick 583s Number of leaves.......................: 100 583s Output tree file ......................: Myo.ML.dnd 583s Output tree format ....................: Newick 583s Branch lengths.........................: Input 583s Heterogeneous model....................: no 583s Substitution model.....................: JTT92 583s External frequencies initialization for: None 583s Distribution...........................: Gamma 583s Number of classes......................: 4 583s Parameter found........................: Gamma.alpha=0.5 583s - Category 0 (Pr = 0.25) rate..........: 0.0333878 583s - Category 1 (Pr = 0.25) rate..........: 0.251916 583s - Category 2 (Pr = 0.25) rate..........: 0.820268 583s - Category 3 (Pr = 0.25) rate..........: 2.89443 583s Rate distribution......................: Gamma 583s Number of classes......................: 4 583s Initializing data structure............: Done. 583s Number of distinct sites...............: 148 583s Initial log likelihood.................: -5172.32804563857 583s Message handler........................: Myo.messages 583s Profiler...............................: Myo.profile 583s Max # ML evaluations...................: 10000 583s Tolerance..............................: 1e-06 583s Optimize topology......................: yes 583s Optimization method....................: FullD 583s Algorithm used for derivable parameters: Newton 583s Reparametrization......................: no 583s Molecular clock........................: None 585s Trying to perform 14 NNI(s). 586s Current value.......................: 5138.691253 588s Trying to perform 10 NNI(s). 589s Current value.......................: 5115.13294 591s Trying to perform 3 NNI(s). 591s Current value.......................: 5099.807407 594s Trying to perform 4 NNI(s). 594s Current value.......................: 5095.515277 600s Optimizing... / 1 600s 602s Trying to perform 3 NNI(s). 603s Current value.......................: 5088.452859 605s Trying to perform 3 NNI(s). 605s Current value.......................: 5082.250586 608s Trying to perform 3 NNI(s). 608s Current value.......................: 5080.008793 610s Trying to perform 2 NNI(s). 611s Current value.......................: 5079.627776 617s Optimizing... / 1 617s 619s Trying to perform 3 NNI(s). 619s Current value.......................: 5072.042006 622s Trying to perform 2 NNI(s). 622s Current value.......................: 5072.041936 723s Optimizing... / 1 Optimizing... - 2 Optimizing... \ 3 Optimizing... - 4 Optimizing... / 5 Optimizing... - 6 Optimizing... \ 7 Optimizing... - 8 Optimizing... / 9 Optimizing... - 10 Optimizing... \ 11 Optimizing... - 12 Optimizing... / 13 Optimizing... - 14 Optimizing... \ 15 Optimizing... - 16 Optimizing... / 17 Optimizing... - 18 Optimizing... \ 19 Optimizing... - 20 Optimizing... / 21 Optimizing... - 22 Optimizing... \ 23 Optimizing... - 24 Optimizing... / 25 723s 723s Performed..............................: 26 function evaluations. 723s Output tree file ......................: Myo.ML.dnd 723s Output tree format ....................: Newick 723s Log likelihood.........................: -5032.52152323802 723s Gamma.alpha............................: 1.03575 723s WARNING!!! This parameter has a value close to the boundary: BrLen9(1e-06). 723s WARNING!!! This parameter has a value close to the boundary: BrLen10(1e-06). 723s WARNING!!! This parameter has a value close to the boundary: BrLen11(1e-06). 723s WARNING!!! This parameter has a value close to the boundary: BrLen12(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen13(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen24(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen36(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen49(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen54(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen55(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen58(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen63(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen64(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen70(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen77(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen78(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen79(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen80(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen81(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen85(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen86(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen97(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen99(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen100(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen101(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen108(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen109(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen110(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen116(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen120(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen122(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen141(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen142(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen145(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen147(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen148(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen149(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen152(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen153(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen154(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen155(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen156(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen161(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen164(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen165(1e-06). 724s WARNING!!! This parameter has a value close to the boundary: BrLen178(1e-06). 724s WARNING!!! Parameter output.estimates.alias not specified. Default used instead: 1 724s Output estimates to file...............: Myo.params.txt 724s 724s Posterior rate distribution for dataset: 724s 724s Pr(0.144031) = 0.294118 724s Pr(0.487239) = 0.254902 724s Pr(1.005679) = 0.281046 724s Pr(2.363052) = 0.169935 724s 724s 724s Alignment information logfile..........: Myo.infos 724s BppML's done. Bye. 724s Total execution time: 0.000000d, 0.000000h, 2.000000m, 20.000000s. 724s Passed 724s Test 6 724s ****************************************************************** 724s * Bio++ Sequence Generator, version 2.4.0 * 724s * * 724s * Authors: J. Dutheil * 724s * B. Boussau Last Modif. 19/02/18 * 724s * L. Gueguen * 724s * M. Groussin * 724s ****************************************************************** 724s 724s Parsing options: 724s Parsing file SeqGen.bpp for options. 724s Random seed set to.....................: 5 724s Alphabet type .........................: DNA 724s WARNING!!! Parameter input.tree.method not specified. Default used instead: single 724s Input tree file .......................: ../../Data/LSUrooted.dnd 724s Input tree format .....................: Newick 724s Number of leaves.......................: 79 724s WARNING!!! Parameter output.tree_ids.file not specified. Default used instead: none 724s WARNING!!! Parameter input.tree.scale not specified. Default used instead: 1 724s Heterogeneous model....................: no 724s Substitution model.....................: HKY85 724s External frequencies initialization for: None 724s Parameter found........................: HKY85.kappa=2.843 724s Parameter found........................: HKY85.theta=0.7 724s Parameter found........................: HKY85.theta1=0.4 724s Parameter found........................: HKY85.theta2=0.6 724s WARNING!!! Parameter input.infos not specified. Default used instead: none 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Parameter found........................: Gamma.alpha=0.358 724s - Category 0 (Pr = 0.25) rate..........: 0.0111505 724s - Category 1 (Pr = 0.25) rate..........: 0.149763 724s - Category 2 (Pr = 0.25) rate..........: 0.681517 724s - Category 3 (Pr = 0.25) rate..........: 3.15757 724s Rate distribution......................: Gamma 724s Number of classes......................: 4 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Parameter found........................: Gamma.alpha=0.358 724s - Category 0 (Pr = 0.25) rate..........: 0.0111505 724s - Category 1 (Pr = 0.25) rate..........: 0.149763 724s - Category 2 (Pr = 0.25) rate..........: 0.681517 724s - Category 3 (Pr = 0.25) rate..........: 3.15757 724s Rate distribution......................: Gamma 724s Number of classes......................: 4 724s Number of sites........................: 300 724s Perform simulations....................: Done. 724s Output alignment file .................: LSUSim.fasta 724s Output alignment format ...............: FASTA file 724s BppSeqGen's done. Bye. 724s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 724s Passed 724s Test 7 724s ****************************************************************** 724s * Bio++ Sequence Generator, version 2.4.0 * 724s * * 724s * Authors: J. Dutheil * 724s * B. Boussau Last Modif. 19/02/18 * 724s * L. Gueguen * 724s * M. Groussin * 724s ****************************************************************** 724s 724s Parsing options: 724s Parsing file SeqGen.bpp for options. 724s Random seed set to.....................: 5 724s Alphabet type .........................: DNA 724s WARNING!!! Parameter input.tree.method not specified. Default used instead: single 724s Input tree file .......................: ../../Data/LSUrooted.dnd 724s Input tree format .....................: Newick 724s Number of leaves.......................: 79 724s WARNING!!! Parameter output.tree_ids.file not specified. Default used instead: none 724s WARNING!!! Parameter input.tree.scale not specified. Default used instead: 1 724s Heterogeneous model....................: no 724s Covarion model.........................: G01 724s Substitution model.....................: HKY85 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Substitution model.....................: G01 724s External frequencies initialization for: None 724s Parameter found........................: G01.model_HKY85.kappa=2.843 724s Parameter found........................: G01.model_HKY85.theta=0.7 724s Parameter found........................: G01.model_HKY85.theta1=0.4 724s Parameter found........................: G01.model_HKY85.theta2=0.6 724s Parameter found........................: G01.rdist_Gamma.alpha=0.358 724s Parameter found........................: G01.nu=1 724s WARNING!!! Parameter input.infos not specified. Default used instead: none 724s Number of sites........................: 300 724s Perform simulations....................: Done. 724s Output alignment file .................: LSUSim.fasta 724s Output alignment format ...............: FASTA file 724s BppSeqGen's done. Bye. 724s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 724s Passed 724s Test 8 724s ****************************************************************** 724s * Bio++ Sequence Generator, version 2.4.0 * 724s * * 724s * Authors: J. Dutheil * 724s * B. Boussau Last Modif. 19/02/18 * 724s * L. Gueguen * 724s * M. Groussin * 724s ****************************************************************** 724s 724s Parsing options: 724s Parsing file SeqGen.bpp for options. 724s Random seed set to.....................: 5 724s Alphabet type .........................: DNA 724s WARNING!!! Parameter input.tree.method not specified. Default used instead: single 724s Input tree file .......................: ../../Data/LSUrooted.dnd 724s Input tree format .....................: Newick 724s Number of leaves.......................: 79 724s WARNING!!! Parameter output.tree_ids.file not specified. Default used instead: none 724s WARNING!!! Parameter input.tree.scale not specified. Default used instead: 1 724s Heterogeneous model....................: general 724s Number of distinct models..............: 2 724s Parameter found........................: GC.theta=0.9 724s Root frequencies ......................: GC 724s Stationarity assumed...................: no 724s Substitution model.....................: T92 724s Frequencies Initialization for model...: None 724s Parameter found........................: T92.kappa_1=2 724s Parameter found........................: T92.theta_1=0.1 724s Model1 is associated to................: 63 node(s). 724s Substitution model.....................: T92 724s Frequencies Initialization for model...: None 724s Parameter found........................: T92.kappa_2=1 724s Parameter found........................: T92.theta_2=0.9 724s Model2 is associated to................: 93 node(s). 724s WARNING!!! Parameter input.infos not specified. Default used instead: none 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Parameter found........................: Gamma.alpha=0.358 724s - Category 0 (Pr = 0.25) rate..........: 0.0111505 724s - Category 1 (Pr = 0.25) rate..........: 0.149763 724s - Category 2 (Pr = 0.25) rate..........: 0.681517 724s - Category 3 (Pr = 0.25) rate..........: 3.15757 724s Rate distribution......................: Gamma 724s Number of classes......................: 4 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Parameter found........................: Gamma.alpha=0.358 724s - Category 0 (Pr = 0.25) rate..........: 0.0111505 724s - Category 1 (Pr = 0.25) rate..........: 0.149763 724s - Category 2 (Pr = 0.25) rate..........: 0.681517 724s - Category 3 (Pr = 0.25) rate..........: 3.15757 724s Rate distribution......................: Gamma 724s Number of classes......................: 4 724s Number of sites........................: 300 724s Perform simulations....................: Done. 724s Output alignment file .................: LSUSim.fasta 724s Output alignment format ...............: FASTA file 724s BppSeqGen's done. Bye. 724s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 724s Passed 724s Test 9 724s ****************************************************************** 724s * Bio++ Sequence Generator, version 2.4.0 * 724s * * 724s * Authors: J. Dutheil * 724s * B. Boussau Last Modif. 19/02/18 * 724s * L. Gueguen * 724s * M. Groussin * 724s ****************************************************************** 724s 724s Parsing options: 724s Parsing file SeqGen.bpp for options. 724s Random seed set to.....................: 5 724s Alphabet type .........................: DNA 724s WARNING!!! Parameter input.tree.method not specified. Default used instead: single 724s Input tree file .......................: ../../Data/LSUrooted.dnd 724s Input tree format .....................: Newick 724s Number of leaves.......................: 79 724s WARNING!!! Parameter output.tree_ids.file not specified. Default used instead: none 724s WARNING!!! Parameter input.tree.scale not specified. Default used instead: 1 724s Heterogeneous model....................: no 724s Substitution model.....................: HKY85 724s External frequencies initialization for: None 724s Parameter found........................: HKY85.kappa=2.843 724s Parameter found........................: HKY85.theta=0.7 724s Parameter found........................: HKY85.theta1=0.4 724s Parameter found........................: HKY85.theta2=0.6 724s Site information.......................: infos.csv 724s Number of sites........................: 30 724s Perform simulations....................: Done. 724s Output alignment file .................: LSUSim.fasta 724s Output alignment format ...............: FASTA file 724s BppSeqGen's done. Bye. 724s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 724s Passed 724s Test 10 724s ****************************************************************** 724s * Bio++ Distance Methods, version 2.4.0 * 724s * Author: J. Dutheil Created 05/05/07 * 724s * Last Modif. 19/02/18 * 724s ****************************************************************** 724s 724s Parsing options: 724s Parsing file Dist.bpp for options. 724s Alphabet type .........................: DNA 724s Sequence file .........................: ../Data/LSU.phy 724s Sequence format .......................: Phylip file, extended,sequential 724s Sites to use...........................: complete 724s Complete sites.........................: 2353 724s Number of sequences....................: 79 724s Number of sites........................: 2353 724s Substitution model.....................: HKY85 724s External frequencies initialization for: None 724s Parameter found........................: HKY85.kappa=2.843 724s Parameter found........................: HKY85.theta=0.5 724s Parameter found........................: HKY85.theta1=0.5 724s Parameter found........................: HKY85.theta2=0.5 724s Distribution...........................: Gamma 724s Number of classes......................: 4 724s Parameter found........................: Gamma.alpha=0.358 724s - Category 0 (Pr = 0.25) rate..........: 0.0111505 724s - Category 1 (Pr = 0.25) rate..........: 0.149763 724s - Category 2 (Pr = 0.25) rate..........: 0.681517 724s - Category 3 (Pr = 0.25) rate..........: 3.15757 724s Rate distribution......................: Gamma 724s Number of classes......................: 4 724s Tree reconstruction method.............: bionj 724s Model parameters estimation method.....: init 724s Message handler........................: LSU.messages 724s Profiler...............................: LSU.profile 724s WARNING!!! Parameter optimization.ignore_parameter not specified. Default used instead: 724s Max # ML evaluations...................: 10000 724s Tolerance..............................: 1e-06 724s Estimating distance matrix.............: 730s [ ] 0% [= ] 3% [== ] 7% [==== ] 11% [===== ] 15% [======= ] 19% [======== ] 23% [========== ] 26% [=========== ] 30% [============= ] 34% [============== ] 38% [================ ] 42% [================= ] 46% [=================== ] 50% [==================== ] 53% [===================== ] 57% [======================= ] 61% [======================== ] 65% [========================== ] 69% [=========================== ] 73% [============================= ] 76% [============================== ] 80% [================================ ] 84% [================================= ] 88% [=================================== ] 92% [==================================== ] 96% [======================================] 100%Done. 730s Building tree..........................: [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100%Done. 730s Output matrix file.....................: LSU.mat 730s WARNING!!! Parameter output.matrix.format not specified. Default used instead: none 730s WARNING!!! Argument 'Phylip#type' not found. Default used instead: not extended. 730s Output tree file ......................: LSU.bionj.dnd 730s Output tree format ....................: Newick 730s Number of bootstrap samples............: 10 730s Use approximate bootstrap..............: no 730s Bootstrap trees stored in file.........: LSU.bionj_bstrees.dnd 730s Bootstrapping..........................: 788s [ ] 0% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [==== ] 11% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [======== ] 22% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [============ ] 33% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [================ ] 44% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [===================== ] 55% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [========================= ] 66% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [============================= ] 77% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [================================= ] 88% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100% [======================================] 100% [ ] 0% [> ] 2% [>> ] 5% [>>> ] 8% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 16% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 24% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 29% [>>>>>>>>>>>> ] 32% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 37% [>>>>>>>>>>>>>>> ] 40% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 45% [>>>>>>>>>>>>>>>>>> ] 48% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 53% [>>>>>>>>>>>>>>>>>>>>> ] 56% [>>>>>>>>>>>>>>>>>>>>>> ] 58% [>>>>>>>>>>>>>>>>>>>>>>> ] 61% [>>>>>>>>>>>>>>>>>>>>>>>> ] 64% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 66% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 69% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 72% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 74% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 77% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 80% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 82% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 85% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 88% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 90% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 93% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 96% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 98% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100%Done. 789s Compute bootstrap values...............: [ ] 0% [= ] 3% [== ] 6% [=== ] 9% [==== ] 12% [====== ] 16% [======= ] 19% [======== ] 22% [========= ] 25% [=========== ] 29% [============ ] 32% [============= ] 35% [============== ] 38% [================ ] 42% [================= ] 45% [================== ] 48% [=================== ] 51% [==================== ] 55% [====================== ] 58% [======================= ] 61% [======================== ] 64% [========================= ] 68% [=========================== ] 71% [============================ ] 74% [============================= ] 77% [============================== ] 81% [================================ ] 84% [================================= ] 87% [================================== ] 90% [=================================== ] 94% [===================================== ] 97% [======================================] 100%Done. 789s Output tree file ......................: LSU.bionj.dnd 789s Output tree format ....................: Newick 789s BppDist's done. Bye. 789s Total execution time: 0.000000d, 0.000000h, 1.000000m, 6.000000s. 789s Passed 789s Test 11 789s ****************************************************************** 789s * Bio++ Parsimony Methods, version 2.4.0 * 789s * Author: J. Dutheil Created 05/05/07 * 789s * Last Modif. 19/02/18 * 789s ****************************************************************** 789s 789s Parsing options: 789s Parsing file Pars.bpp for options. 789s Alphabet type .........................: DNA 789s Use gaps...............................: no 789s Sequence file .........................: ../Data/LSU.phy 789s Sequence format .......................: Phylip file, extended,sequential 789s Sites to use...........................: complete 789s Complete sites.........................: 2353 789s Number of sequences....................: 79 789s Number of sites........................: 2353 789s WARNING!!! Parameter init.tree not specified. Default used instead: user 789s Input tree.............................: user 789s Input tree file .......................: ../Data/LSU.dnd 789s Input tree format .....................: Newick 789s Number of leaves.......................: 79 789s Initializing parsimony.................: Done. 789s Initial parsimony score................: 14887 789s Optimize topology......................: yes 789s Trying to perform 5 NNI(s). 789s Current value.......................: 14868 789s Trying to perform 3 NNI(s). 789s Current value.......................: 14862 789s Trying to perform 2 NNI(s). 789s Current value.......................: 14859 789s Trying to perform 1 NNI(s). 789s Current value.......................: 14854 789s Final parsimony score..................: 14854 789s Output tree file ......................: LSU.pars.dnd 789s Output tree format ....................: Newick 789s Number of bootstrap samples............: 1000 789s Bootstrap trees stored in file.........: LSU.pars_bstrees.dnd 789s Bootstrapping..........................: 898s [ ] 0% [= ] 2% [== ] 5% [=== ] 8% [==== ] 10% [===== ] 13% [====== ] 16% [======= ] 18% [======== ] 21% [========= ] 24% [========== ] 27% [=========== ] 29% [============ ] 32% [============= ] 35% [============== ] 37% [=============== ] 40% [================ ] 43% [================= ] 45% [================== ] 48% [=================== ] 51% [==================== ] 54% [===================== ] 56% [====================== ] 59% [======================= ] 62% [======================== ] 64% [========================= ] 67% [========================== ] 70% [=========================== ] 72% [============================ ] 75% [============================= ] 78% [============================== ] 81% [=============================== ] 83% [================================ ] 86% [================================= ] 89% [================================== ] 91% [=================================== ] 94% [==================================== ] 97% [======================================] 100%Done. 898s Compute bootstrap values...............: 901s [ ] 0% [= ] 3% [== ] 6% [=== ] 9% [==== ] 12% [====== ] 16% [======= ] 19% [======== ] 22% [========= ] 25% [=========== ] 29% [============ ] 32% [============= ] 35% [============== ] 38% [================ ] 42% [================= ] 45% [================== ] 48% [=================== ] 51% [==================== ] 55% [====================== ] 58% [======================= ] 61% [======================== ] 64% [========================= ] 68% [=========================== ] 71% [============================ ] 74% [============================= ] 77% [============================== ] 81% [================================ ] 84% [================================= ] 87% [================================== ] 90% [=================================== ] 94% [===================================== ] 97% [======================================] 100%Done. 901s Output tree file ......................: LSU.pars.dnd 901s Output tree format ....................: Newick 901s BppPars's done. Bye. 901s Total execution time: 0.000000d, 0.000000h, 1.000000m, 52.000000s. 901s Passed 901s Test 12 901s ****************************************************************** 901s * Bio++ ReRoot, version 2.4.0 * 901s * Author: C. Scornavacca Created 15/01/08 * 901s * Last Modif. 19/02/18 * 901s ****************************************************************** 901s 901s Parsing options: 901s Parsing file ReRoot.bpp for options. 901s Input list file........................: ../Data/treeList2.dnd 901s Outgroups file.........................: ../Data/OutGroup.txt 901s Output file............................: treeList2_rooted.dnd 901s WARNING!!! Parameter tryAgain.option not specified. Default used instead: 1 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 \ 15 - 16 / 17 - 18 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 \ 15 - 16 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 \ 15 - 16 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 \ 15 - 16 nodes loaded. 901s / 1 - 2 \ 3 - 4 / 5 - 6 \ 7 - 8 / 9 - 10 \ 11 - 12 / 13 - 14 nodes loaded. 901s Done. 901s BppReRoot's done. Bye. 901s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 901s Passed 901s Test 13 901s ****************************************************************** 901s * Bio++ Sequence Manipulator, version 2.4.0. * 901s * Author: J. Dutheil Last Modif. 19/02/18 * 901s ****************************************************************** 901s 901s Parsing options: 901s Parsing file SeqMan.bpp for options. 901s Alphabet type .........................: DNA 901s Sequence file .........................: ../Data/LSU.phy 901s Sequence format .......................: Phylip file, extended,sequential 901s Number of sequences....................: 79 901s Performing action......................: Switch 901s Performing action......................: Transcript 901s Performing action......................: CoerceToAlignment 901s Performing action......................: KeepComplete 901s Performing action......................: GapToUnknown 901s Final sequences are aligned............: yes 901s Output alignment file .................: LSU.fas 901s Output alignment format ...............: FASTA file 901s BppSeqMan's done. Bye. 901s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 901s Passed 901s Test 14 901s ****************************************************************** 901s * Bio++ Alignment Score, version 2.4.0 * 901s * Author: J. Dutheil Last Modif. 19/02/18 * 901s ****************************************************************** 901s 901s Parsing options: 901s Parsing file AlnScores.bpp for options. 901s Alphabet type .........................: DNA 901s Sequence file .test....................: ../Data/HIV1_REF_2010_gag_DNA.fasta 901s Sequence format .test..................: FASTA file 901s Sequence file .ref.....................: ../Data/HIV1_REF_2010_gag_macse_DNA.fasta 901s Sequence format .ref...................: FASTA file 901s Reorder sequences in ref. alignment....: 901s [ ] 0% [> ] 2% [>> ] 5% [>>> ] 7% [>>>> ] 10% [>>>>> ] 13% [>>>>>> ] 15% [>>>>>>> ] 18% [>>>>>>>> ] 21% [>>>>>>>>> ] 23% [>>>>>>>>>> ] 26% [>>>>>>>>>>> ] 28% [>>>>>>>>>>>> ] 31% [>>>>>>>>>>>>> ] 34% [>>>>>>>>>>>>>> ] 36% [>>>>>>>>>>>>>>> ] 39% [>>>>>>>>>>>>>>>> ] 42% [>>>>>>>>>>>>>>>>> ] 44% [>>>>>>>>>>>>>>>>>> ] 47% [>>>>>>>>>>>>>>>>>>> ] 50% [>>>>>>>>>>>>>>>>>>>> ] 52% [>>>>>>>>>>>>>>>>>>>>> ] 55% [>>>>>>>>>>>>>>>>>>>>>> ] 57% [>>>>>>>>>>>>>>>>>>>>>>> ] 60% [>>>>>>>>>>>>>>>>>>>>>>>> ] 63% [>>>>>>>>>>>>>>>>>>>>>>>>> ] 65% [>>>>>>>>>>>>>>>>>>>>>>>>>> ] 68% [>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 71% [>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 73% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 76% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 78% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 81% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 84% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 86% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 89% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 92% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 94% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ] 97% [>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>] 100%Done. 901s WARNING!!! Parameter score.na not specified. Default used instead: 0 901s NA value to used.......................: 0 901s Scores uniformized for words of size...: 3 901s Phase based on 1st occurence of........: ATG 901s First word starts at...................: 1 901s Output scores to.......................: HIV1_REF_2010_gag.scores.txt 901s Output mase with site filter to........: HIV1_REF_2010_gag.filter.mase 901s Threshold for SPS......................: 0.8 901s BppAlnScore's done. Bye. 901s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 901s Passed 901s Test 15 901s ****************************************************************** 901s * Bio++ Population Statistics, version 2.4.0 * 901s * Author: J. Dutheil Last Modif. 19/02/18 * 901s ****************************************************************** 901s 901s Parsing options: 901s Parsing file PopStatsCodonSites.bpp for options. 901s WARNING!!! Parameter logfile not specified. Default used instead: none 901s Alphabet type .........................: Codon(letter=DNA) 901s Genetic Code...........................: Standard 901s Sequence file .ingroup.................: alignment.phy 901s Sequence format .ingroup...............: Phylip file, interleaved 901s Stop codons policy.....................: Keep 901s Number of sequences in ingroup.........: 10 901s Number of sequences in outgroup........: 0 901s Site statistics output to:.............: alignment.codons.csv 901s PiN:...................................: 1.72 901s PiS:...................................: 1.12 901s #N:....................................: 29.7333 901s #S:....................................: 9.26667 901s PiN / PiS (corrected for #N and #S):...: 0.478619 901s BppPopStats's done. Bye. 901s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 901s Passed 901s Test 16 901s ****************************************************************** 901s * Bio++ Tree Drawing program, version 2.4.0. * 901s * * 901s * Authors: J. Dutheil Last Modif. 19/02/18 * 901s ****************************************************************** 901s 901s Parsing options: 901s Parsing file TreeDraw.bpp for options. 901s Input tree file .......................: ../Data/LSU.dnd 901s Input tree format .....................: Newick 901s Number of leaves.......................: 79 901s Plot type..............................: Phylogram 901s WARNING!!! Parameter draw.ids not specified. Default used instead: 0 901s WARNING!!! Parameter draw.brlen not specified. Default used instead: 0 901s WARNING!!! Parameter draw.bs not specified. Default used instead: 0 901s Draw leaf names........................: yes 902s Draw node ids..........................: no 902s Draw branch lengths....................: no 902s Draw bootstrap values..................: no 902s BppTreeDraw's done. Bye. 902s Total execution time: 0.000000d, 0.000000h, 0.000000m, 0.000000s. 902s Passed 902s autopkgtest [14:53:03]: test run-unit-test: -----------------------] 902s autopkgtest [14:53:03]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 902s run-unit-test PASS 903s autopkgtest [14:53:04]: @@@@@@@@@@@@@@@@@@@@ summary 903s run-unit-test PASS 914s Creating nova instance adt-noble-s390x-bppsuite-20240326-143801-juju-7f2275-prod-proposed-migration-environment-3-afc75781-cfbb-44d7-93a1-065b7b480690 from image adt/ubuntu-noble-s390x-server-20240326.img (UUID c527e0e4-2e65-4e86-ad63-05d7f665f2fb)...