0s autopkgtest [11:01:31]: starting date and time: 2024-03-26 11:01:31+0000 0s autopkgtest [11:01:31]: git checkout: 4a1cd702 l/adt_testbed: don't blame the testbed for unsolvable build deps 0s autopkgtest [11:01:31]: host juju-7f2275-prod-proposed-migration-environment-3; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dpw4pq31/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed --apt-upgrade biomaj3-process --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.12.2-0ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-3@bos02-s390x-5.secgroup --name adt-noble-s390x-biomaj3-process-20240326-110130-juju-7f2275-prod-proposed-migration-environment-3 --image adt/ubuntu-noble-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-3 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 111s autopkgtest [11:03:22]: testbed dpkg architecture: s390x 111s autopkgtest [11:03:22]: testbed apt version: 2.7.12 111s autopkgtest [11:03:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup 112s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 113s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [496 kB] 113s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [8504 B] 113s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [56.0 kB] 113s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3982 kB] 115s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main s390x Packages [690 kB] 115s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main s390x c-n-f Metadata [3032 B] 115s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x Packages [1372 B] 115s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted s390x c-n-f Metadata [116 B] 115s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x Packages [4126 kB] 115s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe s390x c-n-f Metadata [7292 B] 115s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x Packages [47.8 kB] 115s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse s390x c-n-f Metadata [116 B] 117s Fetched 9535 kB in 4s (2348 kB/s) 117s Reading package lists... 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Calculating upgrade... 119s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 119s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s 0 upgraded, 0 newly installed, 0 to remove and 242 not upgraded. 120s Unknown architecture, assuming PC-style ttyS0 120s sh: Attempting to set up Debian/Ubuntu apt sources automatically 120s sh: Distribution appears to be Ubuntu 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s eatmydata is already the newest version (131-1). 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 122s dbus is already the newest version (1.14.10-4ubuntu1). 122s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 122s rng-tools-debian is already the newest version (2.4). 122s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 122s The following packages will be REMOVED: 122s cloud-init* python3-configobj* python3-debconf* 123s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 123s After this operation, 3256 kB disk space will be freed. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 52170 files and directories currently installed.) 123s Removing cloud-init (24.1.2-0ubuntu1) ... 123s Removing python3-configobj (5.0.8-3) ... 123s Removing python3-debconf (1.5.86) ... 123s Processing triggers for man-db (2.12.0-3) ... 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51781 files and directories currently installed.) 124s Purging configuration files for cloud-init (24.1.2-0ubuntu1) ... 124s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 124s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 124s invoke-rc.d: policy-rc.d denied execution of try-restart. 124s Reading package lists... 124s Building dependency tree... 124s Reading state information... 125s linux-generic is already the newest version (6.8.0-11.11+1). 125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 125s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 125s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 125s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 127s Reading package lists... 127s Reading package lists... 127s Building dependency tree... 127s Reading state information... 127s Calculating upgrade... 127s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 128s autopkgtest [11:03:39]: rebooting testbed after setup commands that affected boot 142s autopkgtest [11:03:53]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Tue Feb 13 23:45:46 UTC 2024 145s autopkgtest [11:03:56]: @@@@@@@@@@@@@@@@@@@@ apt-source biomaj3-process 147s Get:1 http://ftpmaster.internal/ubuntu noble/universe biomaj3-process 3.0.19-1 (dsc) [2375 B] 147s Get:2 http://ftpmaster.internal/ubuntu noble/universe biomaj3-process 3.0.19-1 (tar) [23.6 kB] 147s Get:3 http://ftpmaster.internal/ubuntu noble/universe biomaj3-process 3.0.19-1 (diff) [13.5 kB] 147s gpgv: Signature made Mon Aug 29 12:49:30 2022 UTC 147s gpgv: using RSA key 5FB46F83D3B952046335D26D78DC68DB326D8438 147s gpgv: issuer "osallou@debian.org" 147s gpgv: Can't check signature: No public key 147s dpkg-source: warning: cannot verify inline signature for ./biomaj3-process_3.0.19-1.dsc: no acceptable signature found 147s autopkgtest [11:03:58]: testing package biomaj3-process version 3.0.19-1 147s autopkgtest [11:03:58]: build not needed 148s autopkgtest [11:03:59]: test autodep8-python3: preparing testbed 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 150s Starting pkgProblemResolver with broken count: 0 150s Starting 2 pkgProblemResolver with broken count: 0 150s Done 150s The following additional packages will be installed: 150s libjs-jquery libprotobuf32 python3-all python3-async-timeout 150s python3-biomaj3-core python3-biomaj3-process python3-biomaj3-zipkin 150s python3-click python3-colorama python3-consul python3-decorator 150s python3-deprecated python3-elasticsearch python3-flask python3-itsdangerous 150s python3-packaging python3-pika python3-ply python3-prometheus-client 150s python3-protobuf python3-py-zipkin python3-redis python3-thriftpy 150s python3-werkzeug python3-wrapt 150s Suggested packages: 150s python3-gunicorn redis-server python3-tornado python3-twisted 150s python-elasticsearch-doc python3-dotenv python-flask-doc python-pika-doc 150s python-ply-doc python3-hiredis ipython3 python-werkzeug-doc python3-lxml 150s python3-watchdog 150s Recommended packages: 150s javascript-common python3-asgiref python3-simplejson python3-pyinotify 150s The following NEW packages will be installed: 150s autopkgtest-satdep libjs-jquery libprotobuf32 python3-all 150s python3-async-timeout python3-biomaj3-core python3-biomaj3-process 150s python3-biomaj3-zipkin python3-click python3-colorama python3-consul 150s python3-decorator python3-deprecated python3-elasticsearch python3-flask 150s python3-itsdangerous python3-packaging python3-pika python3-ply 150s python3-prometheus-client python3-protobuf python3-py-zipkin python3-redis 150s python3-thriftpy python3-werkzeug python3-wrapt 150s 0 upgraded, 26 newly installed, 0 to remove and 0 not upgraded. 150s Need to get 2807 kB/2807 kB of archives. 150s After this operation, 13.9 MB of additional disk space will be used. 150s Get:1 /tmp/autopkgtest.skBdYM/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [720 B] 150s Get:2 http://ftpmaster.internal/ubuntu noble/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 151s Get:3 http://ftpmaster.internal/ubuntu noble/main s390x libprotobuf32 s390x 3.21.12-8ubuntu5 [954 kB] 151s Get:4 http://ftpmaster.internal/ubuntu noble/main s390x python3-all s390x 3.12.1-0ubuntu2 [908 B] 151s Get:5 http://ftpmaster.internal/ubuntu noble/universe s390x python3-async-timeout all 4.0.3-1 [6412 B] 151s Get:6 http://ftpmaster.internal/ubuntu noble/universe s390x python3-elasticsearch all 7.17.6-1 [110 kB] 151s Get:7 http://ftpmaster.internal/ubuntu noble/universe s390x python3-biomaj3-core all 3.0.28-2 [24.4 kB] 151s Get:8 http://ftpmaster.internal/ubuntu noble/main s390x python3-ply all 3.11-6 [46.5 kB] 151s Get:9 http://ftpmaster.internal/ubuntu noble/universe s390x python3-thriftpy s390x 0.3.9+ds1-3 [207 kB] 151s Get:10 http://ftpmaster.internal/ubuntu noble/universe s390x python3-py-zipkin all 0.15.0-2 [27.3 kB] 151s Get:11 http://ftpmaster.internal/ubuntu noble/universe s390x python3-biomaj3-zipkin all 0.2.2-3 [15.3 kB] 151s Get:12 http://ftpmaster.internal/ubuntu noble/universe s390x python3-consul all 0.7.1-2 [21.6 kB] 151s Get:13 http://ftpmaster.internal/ubuntu noble/main s390x python3-colorama all 0.4.6-4 [32.1 kB] 151s Get:14 http://ftpmaster.internal/ubuntu noble/main s390x python3-click all 8.1.6-1 [79.0 kB] 151s Get:15 http://ftpmaster.internal/ubuntu noble/main s390x python3-itsdangerous all 2.1.2-4 [14.6 kB] 151s Get:16 http://ftpmaster.internal/ubuntu noble/main s390x python3-werkzeug all 3.0.1-3 [169 kB] 151s Get:17 http://ftpmaster.internal/ubuntu noble/main s390x python3-flask all 3.0.2-1ubuntu1 [82.9 kB] 151s Get:18 http://ftpmaster.internal/ubuntu noble/universe s390x python3-pika all 1.2.0-1 [109 kB] 151s Get:19 http://ftpmaster.internal/ubuntu noble/main s390x python3-decorator all 5.1.1-5 [10.1 kB] 151s Get:20 http://ftpmaster.internal/ubuntu noble/main s390x python3-prometheus-client all 0.19.0+ds1-1 [41.7 kB] 151s Get:21 http://ftpmaster.internal/ubuntu noble/universe s390x python3-protobuf s390x 3.21.12-8ubuntu5 [245 kB] 151s Get:22 http://ftpmaster.internal/ubuntu noble/main s390x python3-wrapt s390x 1.15.0-2build1 [40.4 kB] 151s Get:23 http://ftpmaster.internal/ubuntu noble/universe s390x python3-deprecated all 1.2.14-1 [10.5 kB] 151s Get:24 http://ftpmaster.internal/ubuntu noble/main s390x python3-packaging all 23.2-1 [40.6 kB] 151s Get:25 http://ftpmaster.internal/ubuntu noble/universe s390x python3-redis all 4.3.4-3 [166 kB] 151s Get:26 http://ftpmaster.internal/ubuntu noble/universe s390x python3-biomaj3-process all 3.0.19-1 [25.7 kB] 151s Fetched 2807 kB in 1s (2438 kB/s) 151s Selecting previously unselected package libjs-jquery. 151s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 51726 files and directories currently installed.) 151s Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 151s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 151s Selecting previously unselected package libprotobuf32:s390x. 151s Preparing to unpack .../01-libprotobuf32_3.21.12-8ubuntu5_s390x.deb ... 151s Unpacking libprotobuf32:s390x (3.21.12-8ubuntu5) ... 151s Selecting previously unselected package python3-all. 151s Preparing to unpack .../02-python3-all_3.12.1-0ubuntu2_s390x.deb ... 151s Unpacking python3-all (3.12.1-0ubuntu2) ... 151s Selecting previously unselected package python3-async-timeout. 151s Preparing to unpack .../03-python3-async-timeout_4.0.3-1_all.deb ... 151s Unpacking python3-async-timeout (4.0.3-1) ... 151s Selecting previously unselected package python3-elasticsearch. 151s Preparing to unpack .../04-python3-elasticsearch_7.17.6-1_all.deb ... 151s Unpacking python3-elasticsearch (7.17.6-1) ... 152s Selecting previously unselected package python3-biomaj3-core. 152s Preparing to unpack .../05-python3-biomaj3-core_3.0.28-2_all.deb ... 152s Unpacking python3-biomaj3-core (3.0.28-2) ... 152s Selecting previously unselected package python3-ply. 152s Preparing to unpack .../06-python3-ply_3.11-6_all.deb ... 152s Unpacking python3-ply (3.11-6) ... 152s Selecting previously unselected package python3-thriftpy. 152s Preparing to unpack .../07-python3-thriftpy_0.3.9+ds1-3_s390x.deb ... 152s Unpacking python3-thriftpy (0.3.9+ds1-3) ... 152s Selecting previously unselected package python3-py-zipkin. 152s Preparing to unpack .../08-python3-py-zipkin_0.15.0-2_all.deb ... 152s Unpacking python3-py-zipkin (0.15.0-2) ... 152s Selecting previously unselected package python3-biomaj3-zipkin. 152s Preparing to unpack .../09-python3-biomaj3-zipkin_0.2.2-3_all.deb ... 152s Unpacking python3-biomaj3-zipkin (0.2.2-3) ... 152s Selecting previously unselected package python3-consul. 152s Preparing to unpack .../10-python3-consul_0.7.1-2_all.deb ... 152s Unpacking python3-consul (0.7.1-2) ... 152s Selecting previously unselected package python3-colorama. 152s Preparing to unpack .../11-python3-colorama_0.4.6-4_all.deb ... 152s Unpacking python3-colorama (0.4.6-4) ... 152s Selecting previously unselected package python3-click. 152s Preparing to unpack .../12-python3-click_8.1.6-1_all.deb ... 152s Unpacking python3-click (8.1.6-1) ... 152s Selecting previously unselected package python3-itsdangerous. 152s Preparing to unpack .../13-python3-itsdangerous_2.1.2-4_all.deb ... 152s Unpacking python3-itsdangerous (2.1.2-4) ... 152s Selecting previously unselected package python3-werkzeug. 152s Preparing to unpack .../14-python3-werkzeug_3.0.1-3_all.deb ... 152s Unpacking python3-werkzeug (3.0.1-3) ... 152s Selecting previously unselected package python3-flask. 152s Preparing to unpack .../15-python3-flask_3.0.2-1ubuntu1_all.deb ... 152s Unpacking python3-flask (3.0.2-1ubuntu1) ... 152s Selecting previously unselected package python3-pika. 152s Preparing to unpack .../16-python3-pika_1.2.0-1_all.deb ... 152s Unpacking python3-pika (1.2.0-1) ... 152s Selecting previously unselected package python3-decorator. 152s Preparing to unpack .../17-python3-decorator_5.1.1-5_all.deb ... 152s Unpacking python3-decorator (5.1.1-5) ... 152s Selecting previously unselected package python3-prometheus-client. 152s Preparing to unpack .../18-python3-prometheus-client_0.19.0+ds1-1_all.deb ... 152s Unpacking python3-prometheus-client (0.19.0+ds1-1) ... 152s Selecting previously unselected package python3-protobuf. 152s Preparing to unpack .../19-python3-protobuf_3.21.12-8ubuntu5_s390x.deb ... 152s Unpacking python3-protobuf (3.21.12-8ubuntu5) ... 152s Selecting previously unselected package python3-wrapt. 152s Preparing to unpack .../20-python3-wrapt_1.15.0-2build1_s390x.deb ... 152s Unpacking python3-wrapt (1.15.0-2build1) ... 152s Selecting previously unselected package python3-deprecated. 152s Preparing to unpack .../21-python3-deprecated_1.2.14-1_all.deb ... 152s Unpacking python3-deprecated (1.2.14-1) ... 152s Selecting previously unselected package python3-packaging. 152s Preparing to unpack .../22-python3-packaging_23.2-1_all.deb ... 152s Unpacking python3-packaging (23.2-1) ... 152s Selecting previously unselected package python3-redis. 152s Preparing to unpack .../23-python3-redis_4.3.4-3_all.deb ... 152s Unpacking python3-redis (4.3.4-3) ... 152s Selecting previously unselected package python3-biomaj3-process. 152s Preparing to unpack .../24-python3-biomaj3-process_3.0.19-1_all.deb ... 152s Unpacking python3-biomaj3-process (3.0.19-1) ... 152s Selecting previously unselected package autopkgtest-satdep. 152s Preparing to unpack .../25-1-autopkgtest-satdep.deb ... 152s Unpacking autopkgtest-satdep (0) ... 152s Setting up python3-elasticsearch (7.17.6-1) ... 152s Setting up python3-colorama (0.4.6-4) ... 152s Setting up python3-pika (1.2.0-1) ... 152s Setting up python3-ply (3.11-6) ... 153s Setting up python3-itsdangerous (2.1.2-4) ... 153s Setting up python3-all (3.12.1-0ubuntu2) ... 153s Setting up python3-click (8.1.6-1) ... 153s Setting up python3-async-timeout (4.0.3-1) ... 153s Setting up python3-decorator (5.1.1-5) ... 153s Setting up python3-packaging (23.2-1) ... 153s Setting up python3-biomaj3-core (3.0.28-2) ... 153s Setting up python3-thriftpy (0.3.9+ds1-3) ... 153s Setting up python3-wrapt (1.15.0-2build1) ... 153s Setting up libprotobuf32:s390x (3.21.12-8ubuntu5) ... 153s Setting up python3-consul (0.7.1-2) ... 154s Setting up python3-py-zipkin (0.15.0-2) ... 154s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 154s Setting up python3-protobuf (3.21.12-8ubuntu5) ... 154s Setting up python3-deprecated (1.2.14-1) ... 154s Setting up python3-biomaj3-zipkin (0.2.2-3) ... 154s Setting up python3-prometheus-client (0.19.0+ds1-1) ... 154s Setting up python3-werkzeug (3.0.1-3) ... 154s Setting up python3-redis (4.3.4-3) ... 155s Setting up python3-flask (3.0.2-1ubuntu1) ... 155s Setting up python3-biomaj3-process (3.0.19-1) ... 155s Setting up autopkgtest-satdep (0) ... 155s Processing triggers for man-db (2.12.0-3) ... 155s Processing triggers for libc-bin (2.39-0ubuntu6) ... 158s (Reading database ... 52662 files and directories currently installed.) 158s Removing autopkgtest-satdep (0) ... 158s autopkgtest [11:04:09]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import biomaj_process; print(biomaj_process)" ; done 158s autopkgtest [11:04:09]: test autodep8-python3: [----------------------- 158s Testing with python3.12: 159s 159s autopkgtest [11:04:10]: test autodep8-python3: -----------------------] 159s autopkgtest [11:04:10]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 159s autodep8-python3 PASS (superficial) 160s autopkgtest [11:04:11]: @@@@@@@@@@@@@@@@@@@@ summary 160s autodep8-python3 PASS (superficial) 173s Creating nova instance adt-noble-s390x-biomaj3-process-20240326-110130-juju-7f2275-prod-proposed-migration-environment-3 from image adt/ubuntu-noble-s390x-server-20240326.img (UUID c527e0e4-2e65-4e86-ad63-05d7f665f2fb)...