0s autopkgtest [12:05:26]: starting date: 2024-03-13 0s autopkgtest [12:05:26]: git checkout: d9c0295 adt_testbed.py: supress warnings from apt using a shell pipeline 0s autopkgtest [12:05:26]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._s065r9t/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --setup-commands /home/ubuntu/autopkgtest/setup-commands/setup-testbed --apt-pocket=proposed=src:perl,src:db5.3,src:gdbm,src:mmdebstrap --apt-upgrade roary --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=perl/5.38.2-3.2 db5.3/5.3.28+dfsg2-5 gdbm/1.23-5.1 mmdebstrap/1.4.3-6' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos01-ppc64el-2.secgroup --name adt-noble-ppc64el-roary-20240313-120526-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://us.ports.ubuntu.com/ubuntu-ports/ 98s autopkgtest [12:07:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 99s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 99s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4812 B] 99s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [40.4 kB] 99s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [2754 kB] 99s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [448 kB] 99s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [594 kB] 99s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 99s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 99s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 99s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3111 kB] 100s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 100s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [39.1 kB] 100s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 102s Fetched 7121 kB in 2s (3711 kB/s) 102s Reading package lists... 107s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Calculating upgrade... 108s The following packages were automatically installed and are no longer required: 108s libgdbm-compat4t64 libperl5.38 lto-disabled-list make perl-modules-5.38 108s Use 'sudo apt autoremove' to remove them. 108s The following packages will be REMOVED: 108s dpkg-dev libdpkg-perl libgdbm-compat4 libgdbm6 perl 108s The following NEW packages will be installed: 108s libgdbm-compat4t64 libgdbm6t64 108s The following packages have been kept back: 108s libperl5.38 108s The following packages will be upgraded: 108s cloud-init gdisk perl-base perl-modules-5.38 108s 4 upgraded, 2 newly installed, 5 to remove and 1 not upgraded. 108s Need to get 5932 kB of archives. 108s After this operation, 4151 kB disk space will be freed. 108s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el perl-base ppc64el 5.38.2-3.2 [1916 kB] 109s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libgdbm6t64 ppc64el 1.23-5.1 [41.9 kB] 109s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libgdbm-compat4t64 ppc64el 1.23-5.1 [6972 B] 109s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el perl-modules-5.38 all 5.38.2-3.2 [3110 kB] 109s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el cloud-init all 24.1.1-0ubuntu1 [597 kB] 109s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el gdisk ppc64el 1.0.10-1 [260 kB] 109s Preconfiguring packages ... 109s Fetched 5932 kB in 1s (6565 kB/s) 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70112 files and directories currently installed.) 110s Removing dpkg-dev (1.22.4ubuntu5) ... 110s Removing libdpkg-perl (1.22.4ubuntu5) ... 110s Removing perl (5.38.2-3) ... 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69531 files and directories currently installed.) 110s Preparing to unpack .../perl-base_5.38.2-3.2_ppc64el.deb ... 110s Unpacking perl-base (5.38.2-3.2) over (5.38.2-3) ... 110s Setting up perl-base (5.38.2-3.2) ... 110s dpkg: libgdbm6:ppc64el: dependency problems, but removing anyway as you requested: 110s python3-gdbm:ppc64el depends on libgdbm6 (>= 1.16). 110s man-db depends on libgdbm6 (>= 1.16). 110s libperl5.38:ppc64el depends on libgdbm6 (>= 1.21). 110s libgdbm-compat4:ppc64el depends on libgdbm6 (>= 1.16). 110s 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69531 files and directories currently installed.) 110s Removing libgdbm6:ppc64el (1.23-5) ... 110s Selecting previously unselected package libgdbm6t64:ppc64el. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69526 files and directories currently installed.) 110s Preparing to unpack .../libgdbm6t64_1.23-5.1_ppc64el.deb ... 110s Unpacking libgdbm6t64:ppc64el (1.23-5.1) ... 110s dpkg: libgdbm-compat4:ppc64el: dependency problems, but removing anyway as you requested: 110s libperl5.38:ppc64el depends on libgdbm-compat4 (>= 1.18-3). 110s 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69532 files and directories currently installed.) 110s Removing libgdbm-compat4:ppc64el (1.23-5) ... 110s Selecting previously unselected package libgdbm-compat4t64:ppc64el. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69527 files and directories currently installed.) 110s Preparing to unpack .../libgdbm-compat4t64_1.23-5.1_ppc64el.deb ... 110s Unpacking libgdbm-compat4t64:ppc64el (1.23-5.1) ... 110s Preparing to unpack .../perl-modules-5.38_5.38.2-3.2_all.deb ... 110s Unpacking perl-modules-5.38 (5.38.2-3.2) over (5.38.2-3) ... 111s Preparing to unpack .../cloud-init_24.1.1-0ubuntu1_all.deb ... 111s Unpacking cloud-init (24.1.1-0ubuntu1) over (24.1-0ubuntu1) ... 111s Preparing to unpack .../gdisk_1.0.10-1_ppc64el.deb ... 111s Unpacking gdisk (1.0.10-1) over (1.0.9-2.1) ... 111s Setting up cloud-init (24.1.1-0ubuntu1) ... 112s Setting up libgdbm6t64:ppc64el (1.23-5.1) ... 112s Setting up libgdbm-compat4t64:ppc64el (1.23-5.1) ... 112s Setting up gdisk (1.0.10-1) ... 112s Setting up perl-modules-5.38 (5.38.2-3.2) ... 112s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 113s Processing triggers for man-db (2.12.0-3) ... 114s Processing triggers for libc-bin (2.39-0ubuntu2) ... 114s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 114s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 114s Reading package lists... 114s Building dependency tree... 114s Reading state information... 114s The following packages will be REMOVED: 114s libgdbm-compat4t64* libperl5.38* lto-disabled-list* make* perl-modules-5.38* 115s 0 upgraded, 0 newly installed, 5 to remove and 0 not upgraded. 115s After this operation, 53.0 MB disk space will be freed. 115s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69533 files and directories currently installed.) 115s Removing libperl5.38:ppc64el (5.38.2-3) ... 115s Removing libgdbm-compat4t64:ppc64el (1.23-5.1) ... 115s Removing lto-disabled-list (47) ... 115s Removing make (4.3-4.1build1) ... 115s Removing perl-modules-5.38 (5.38.2-3.2) ... 115s Processing triggers for man-db (2.12.0-3) ... 115s Processing triggers for libc-bin (2.39-0ubuntu2) ... 116s sh: Attempting to set up Debian/Ubuntu apt sources automatically 116s sh: Distribution appears to be Ubuntu 120s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s eatmydata is already the newest version (131-1). 120s dbus is already the newest version (1.14.10-4ubuntu1). 120s dbus set to manually installed. 120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 120s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 120s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 120s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s rng-tools-debian is already the newest version (2.4). 120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s haveged is already the newest version (1.9.14-1ubuntu1). 121s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 121s Reading package lists... 121s Building dependency tree... 121s Reading state information... 121s The following additional packages will be installed: 121s libdb5.3t64 libdpkg-perl libgdbm-compat4t64 libperl5.38t64 lto-disabled-list 121s make perl perl-modules-5.38 121s Suggested packages: 121s debian-keyring gcc | c-compiler git bzr make-doc perl-doc 121s libterm-readline-gnu-perl | libterm-readline-perl-perl 121s libtap-harness-archive-perl 121s Recommended packages: 121s build-essential gcc | c-compiler fakeroot libalgorithm-merge-perl 121s libfile-fcntllock-perl 121s The following packages will be REMOVED: 121s libdb5.3 121s The following NEW packages will be installed: 121s dpkg-dev libdb5.3t64 libdpkg-perl libgdbm-compat4t64 libperl5.38t64 121s lto-disabled-list make perl perl-modules-5.38 122s 0 upgraded, 9 newly installed, 1 to remove and 0 not upgraded. 122s Need to get 7626 kB/10.7 MB of archives. 122s After this operation, 57.2 MB of additional disk space will be used. 122s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libdb5.3t64 ppc64el 5.3.28+dfsg2-5build1 [868 kB] 122s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libperl5.38t64 ppc64el 5.38.2-3.2 [4957 kB] 122s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el perl ppc64el 5.38.2-3.2 [231 kB] 122s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libdpkg-perl all 1.22.4ubuntu5 [268 kB] 122s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el make ppc64el 4.3-4.1build1 [211 kB] 122s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el lto-disabled-list all 47 [12.4 kB] 122s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el dpkg-dev all 1.22.4ubuntu5 [1078 kB] 123s Fetched 7626 kB in 1s (9232 kB/s) 123s dpkg: libdb5.3:ppc64el: dependency problems, but removing anyway as you requested: 123s libsasl2-modules-db:ppc64el depends on libdb5.3. 123s libpython3.12-stdlib:ppc64el depends on libdb5.3. 123s libpython3.11-stdlib:ppc64el depends on libdb5.3. 123s libpam-modules:ppc64el depends on libdb5.3. 123s iproute2 depends on libdb5.3. 123s apt-utils depends on libdb5.3. 123s 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67568 files and directories currently installed.) 123s Removing libdb5.3:ppc64el (5.3.28+dfsg2-4) ... 123s Selecting previously unselected package libdb5.3t64:ppc64el. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67562 files and directories currently installed.) 123s Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-5build1_ppc64el.deb ... 123s Unpacking libdb5.3t64:ppc64el (5.3.28+dfsg2-5build1) ... 123s Setting up libdb5.3t64:ppc64el (5.3.28+dfsg2-5build1) ... 123s Selecting previously unselected package perl-modules-5.38. 123s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 67568 files and directories currently installed.) 123s Preparing to unpack .../0-perl-modules-5.38_5.38.2-3.2_all.deb ... 123s Unpacking perl-modules-5.38 (5.38.2-3.2) ... 123s Selecting previously unselected package libgdbm-compat4t64:ppc64el. 123s Preparing to unpack .../1-libgdbm-compat4t64_1.23-5.1_ppc64el.deb ... 123s Unpacking libgdbm-compat4t64:ppc64el (1.23-5.1) ... 123s Selecting previously unselected package libperl5.38t64:ppc64el. 123s Preparing to unpack .../2-libperl5.38t64_5.38.2-3.2_ppc64el.deb ... 123s Unpacking libperl5.38t64:ppc64el (5.38.2-3.2) ... 124s Selecting previously unselected package perl. 124s Preparing to unpack .../3-perl_5.38.2-3.2_ppc64el.deb ... 124s Unpacking perl (5.38.2-3.2) ... 124s Selecting previously unselected package libdpkg-perl. 124s Preparing to unpack .../4-libdpkg-perl_1.22.4ubuntu5_all.deb ... 124s Unpacking libdpkg-perl (1.22.4ubuntu5) ... 124s Selecting previously unselected package make. 124s Preparing to unpack .../5-make_4.3-4.1build1_ppc64el.deb ... 124s Unpacking make (4.3-4.1build1) ... 124s Selecting previously unselected package lto-disabled-list. 124s Preparing to unpack .../6-lto-disabled-list_47_all.deb ... 124s Unpacking lto-disabled-list (47) ... 124s Selecting previously unselected package dpkg-dev. 124s Preparing to unpack .../7-dpkg-dev_1.22.4ubuntu5_all.deb ... 124s Unpacking dpkg-dev (1.22.4ubuntu5) ... 124s Setting up lto-disabled-list (47) ... 124s Setting up libgdbm-compat4t64:ppc64el (1.23-5.1) ... 124s Setting up make (4.3-4.1build1) ... 124s Setting up perl-modules-5.38 (5.38.2-3.2) ... 124s Setting up libperl5.38t64:ppc64el (5.38.2-3.2) ... 124s Setting up perl (5.38.2-3.2) ... 124s Setting up libdpkg-perl (1.22.4ubuntu5) ... 124s Setting up dpkg-dev (1.22.4ubuntu5) ... 124s Processing triggers for man-db (2.12.0-3) ... 125s Processing triggers for libc-bin (2.39-0ubuntu2) ... 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 125s The following packages will be REMOVED: 125s cloud-init* python3-configobj* python3-debconf* 125s 0 upgraded, 0 newly installed, 3 to remove and 0 not upgraded. 125s After this operation, 3252 kB disk space will be freed. 125s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70114 files and directories currently installed.) 125s Removing cloud-init (24.1.1-0ubuntu1) ... 126s Removing python3-configobj (5.0.8-3) ... 126s Removing python3-debconf (1.5.86) ... 126s Processing triggers for man-db (2.12.0-3) ... 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69725 files and directories currently installed.) 126s Purging configuration files for cloud-init (24.1.1-0ubuntu1) ... 127s dpkg: warning: while removing cloud-init, directory '/etc/cloud/cloud.cfg.d' not empty so not removed 127s Processing triggers for rsyslog (8.2312.0-3ubuntu3) ... 127s Reading package lists... 128s Building dependency tree... 128s Reading state information... 128s linux-generic is already the newest version (6.8.0-11.11+1). 128s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 128s Hit:1 http://ftpmaster.internal/ubuntu noble InRelease 128s Hit:2 http://ftpmaster.internal/ubuntu noble-updates InRelease 128s Hit:3 http://ftpmaster.internal/ubuntu noble-security InRelease 129s Hit:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease 129s Hit:5 http://ftpmaster.internal/ubuntu noble-backports InRelease 132s Reading package lists... 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 132s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 132s Reading package lists... 133s Building dependency tree... 133s Reading state information... 133s Calculating upgrade... 133s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 133s Reading package lists... 133s Building dependency tree... 133s Reading state information... 133s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 134s autopkgtest [12:07:40]: rebooting testbed after setup commands that affected boot 289s autopkgtest [12:10:15]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 289s autopkgtest [12:10:15]: testbed dpkg architecture: ppc64el 291s autopkgtest [12:10:17]: @@@@@@@@@@@@@@@@@@@@ apt-source roary 291s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:1 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:2 and /etc/apt/sources.list.d/ubuntu.sources:1 291s W: Target Packages (main/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (main/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (main/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (universe/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (universe/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (universe/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (universe/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (restricted/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (restricted/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (restricted/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (restricted/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (multiverse/binary-ppc64el/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target Packages (multiverse/binary-all/Packages) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (multiverse/cnf/Commands-ppc64el) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 291s W: Target CNF (multiverse/cnf/Commands-all) is configured multiple times in /etc/apt/sources.list:3 and /etc/apt/sources.list.d/ubuntu.sources:2 292s Get:1 http://ftpmaster.internal/ubuntu noble/universe roary 3.13.0+dfsg-1 (dsc) [2501 B] 292s Get:2 http://ftpmaster.internal/ubuntu noble/universe roary 3.13.0+dfsg-1 (tar) [207 kB] 292s Get:3 http://ftpmaster.internal/ubuntu noble/universe roary 3.13.0+dfsg-1 (diff) [6612 B] 293s gpgv: Signature made Fri Nov 8 13:51:49 2019 UTC 293s gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 293s gpgv: Can't check signature: No public key 293s dpkg-source: warning: cannot verify inline signature for ./roary_3.13.0+dfsg-1.dsc: no acceptable signature found 293s autopkgtest [12:10:19]: testing package roary version 3.13.0+dfsg-1 293s autopkgtest [12:10:19]: build not needed 293s autopkgtest [12:10:19]: test test-installed: preparing testbed 297s Reading package lists... 297s Building dependency tree... 297s Reading state information... 297s Correcting dependencies...Starting pkgProblemResolver with broken count: 0 297s Starting 2 pkgProblemResolver with broken count: 0 297s Done 297s Done 298s Starting pkgProblemResolver with broken count: 0 298s Starting 2 pkgProblemResolver with broken count: 0 298s Done 298s The following additional packages will be installed: 298s bedtools bioperl cd-hit fasttree fontconfig fontconfig-config 298s fonts-dejavu-core fonts-dejavu-mono libalgorithm-c3-perl 298s libalgorithm-diff-perl libarray-utils-perl libb-hooks-op-check-perl 298s libbio-perl-perl libblas3 libcairo2 libcapture-tiny-perl libclass-c3-perl 298s libclass-data-inheritable-perl libclass-load-perl libclass-load-xs-perl 298s libclone-perl libdata-optlist-perl libdata-stag-perl libdatrie1 libdeflate0 298s libdevel-callchecker-perl libdevel-globaldestruction-perl 298s libdevel-overloadinfo-perl libdevel-stacktrace-perl libdigest-md5-file-perl 298s libdist-checkconflicts-perl libdynaloader-functions-perl 298s libencode-locale-perl libenv-path-perl libeval-closure-perl 298s libexception-class-perl libfile-find-rule-perl libfile-grep-perl 298s libfile-listing-perl libfile-slurper-perl libfile-which-perl 298s libfindbin-libs-perl libfontconfig1 libgfortran5 libgomp1 libgraph-perl 298s libgraph-readwrite-perl libgraphite2-3 libharfbuzz0b libheap-perl 298s libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl 298s libhttp-cookies-perl libhttp-date-perl libhttp-message-perl 298s libhttp-negotiate-perl libice6 libio-all-perl libio-html-perl 298s libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg-turbo8 libjpeg8 298s liblapack3 liblerc4 liblog-log4perl-perl liblwp-mediatypes-perl 298s liblwp-protocol-https-perl libmbedcrypto7 libmbedtls14 libmbedx509-1 298s libmodule-implementation-perl libmodule-runtime-conflicts-perl 298s libmodule-runtime-perl libmoose-perl libmro-compat-perl libnet-http-perl 298s libnet-ssleay-perl libnumber-compare-perl libpackage-deprecationmanager-perl 298s libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 298s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 298s libparams-classify-perl libparams-util-perl libparse-yapp-perl 298s libperlio-utf8-strict-perl libpixman-1-0 libset-object-perl libsharpyuv0 298s libsm6 libspiffy-perl libsub-exporter-perl libsub-exporter-progressive-perl 298s libsub-install-perl libsub-uplevel-perl libtcl8.6 libtest-deep-perl 298s libtest-differences-perl libtest-exception-perl libtest-file-perl 298s libtest-files-perl libtest-most-perl libtest-output-perl libtest-warn-perl 298s libtext-csv-perl libtext-diff-perl libtext-glob-perl libthai-data libthai0 298s libtiff6 libtimedate-perl libtingea0 libtk8.6 libtry-tiny-perl liburi-perl 298s libwebp7 libwww-perl libwww-robotrules-perl libxcb-render0 libxcb-shm0 298s libxft2 libxml-parser-perl libxml-writer-perl libxrender1 libxss1 libxt6 298s mafft mcl ncbi-blast+ ncbi-data parallel perl-openssl-defaults prank 298s r-base-core r-cran-cli r-cran-colorspace r-cran-fansi r-cran-farver 298s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-isoband r-cran-labeling 298s r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-matrix 298s r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig 298s r-cran-r6 r-cran-rcolorbrewer r-cran-rlang r-cran-scales r-cran-tibble 298s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr roary unzip 298s x11-common xdg-utils zip 298s Suggested packages: 298s libxml-sax-expatxs-perl libdata-dump-perl libio-compress-brotli-perl 298s libdb-file-lock-perl libfile-mimeinfo-perl libfile-readbackwards-perl 298s libfreezethaw-perl libmldbm-perl libdbd-csv-perl 298s liblog-dispatch-filerotate-perl librrds-perl libxml-dom-perl 298s libcrypt-ssleay-perl libscalar-number-perl tcl8.6 tk8.6 libsub-name-perl 298s libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl mcl-doc csh 298s fish ksh tcsh zsh debhelper elpa-ess r-doc-info | r-doc-pdf r-mathlib 298s r-base-html r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd 298s r-cran-shiny r-cran-shinyjs r-cran-dplyr r-cran-png r-cran-jpeg r-cran-knitr 298s r-cran-rmarkdown r-cran-viridis r-cran-covr r-cran-magick r-cran-sf 298s r-cran-bit64 r-cran-dbi r-cran-formattable r-cran-nanotime 298s r-cran-palmerpenguins r-cran-stringi r-cran-survival r-cran-units 298s r-cran-vdiffr r-cran-testthat r-cran-bench r-cran-blob r-cran-brio 298s r-cran-callr r-cran-crayon r-cran-evaluate r-cran-here r-cran-hms 298s r-cran-htmltools r-cran-pkgbuild r-cran-pkgload r-cran-purrr r-cran-tidyr 298s Recommended packages: 298s bioperl-run perl-doc libcache-cache-perl libbio-perl-run-perl libdbi-perl 298s libgd-gd2-perl libapache-dbi-perl libxml-simple-perl libyaml-perl 298s libace-perl liblist-moreutils-perl libxml-twig-perl libset-scalar-perl 298s libalgorithm-diff-xs-perl bioperl-run | libbio-perl-run-perl 298s libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl 298s libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl 298s libdbd-pg-perl libgd-perl libgraphviz-perl libhtml-tableextract-perl 298s libpostscript-perl libsoap-lite-perl libsort-naturally-perl 298s libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl 298s libsvg-graph-perl libxml-dom-xpath-perl libxml-sax-perl 298s libxml-sax-writer-perl libxml-libxml-perl libclass-c3-xs-perl perl-tk 298s libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl 298s libxml-perl libdevel-lexalias-perl libhtml-format-perl libipc-shareable-perl 298s liblog-dispatch-perl libdevel-partialdump-perl libtext-csv-xs-perl 298s libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl 298s blast2 lynx ruby r-recommended r-base-dev r-doc-html r-cran-callr 298s r-cran-covr r-cran-crayon r-cran-digest r-cran-htmltools r-cran-htmlwidgets 298s r-cran-knitr r-cran-mockery r-cran-processx r-cran-ps r-cran-rmarkdown 298s r-cran-rprojroot r-cran-rstudioapi r-cran-testthat r-cran-whoami 298s r-cran-unitizer r-cran-dplyr r-cran-hexbin r-cran-hmisc r-cran-mapproj 298s r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg 298s r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-xml2 r-cran-dbi 298s r-cran-rsqlite r-cran-waldo r-cran-lintr r-cran-tidyverse r-cran-lubridate 298s r-cran-fs r-cran-usethis r-cran-bit64 r-cran-dichromat r-cran-hms 298s r-cran-stringi r-cran-data.table r-cran-mockr r-cran-formattable 298s r-cran-generics r-cran-pkgdown r-cran-zeallot libfile-mimeinfo-perl 298s libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils 298s The following NEW packages will be installed: 298s bedtools bioperl cd-hit fasttree fontconfig fontconfig-config 298s fonts-dejavu-core fonts-dejavu-mono libalgorithm-c3-perl 298s libalgorithm-diff-perl libarray-utils-perl libb-hooks-op-check-perl 298s libbio-perl-perl libblas3 libcairo2 libcapture-tiny-perl libclass-c3-perl 298s libclass-data-inheritable-perl libclass-load-perl libclass-load-xs-perl 298s libclone-perl libdata-optlist-perl libdata-stag-perl libdatrie1 libdeflate0 298s libdevel-callchecker-perl libdevel-globaldestruction-perl 298s libdevel-overloadinfo-perl libdevel-stacktrace-perl libdigest-md5-file-perl 298s libdist-checkconflicts-perl libdynaloader-functions-perl 298s libencode-locale-perl libenv-path-perl libeval-closure-perl 298s libexception-class-perl libfile-find-rule-perl libfile-grep-perl 298s libfile-listing-perl libfile-slurper-perl libfile-which-perl 298s libfindbin-libs-perl libfontconfig1 libgfortran5 libgomp1 libgraph-perl 298s libgraph-readwrite-perl libgraphite2-3 libharfbuzz0b libheap-perl 298s libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl 298s libhttp-cookies-perl libhttp-date-perl libhttp-message-perl 298s libhttp-negotiate-perl libice6 libio-all-perl libio-html-perl 298s libio-socket-ssl-perl libio-string-perl libjbig0 libjpeg-turbo8 libjpeg8 298s liblapack3 liblerc4 liblog-log4perl-perl liblwp-mediatypes-perl 298s liblwp-protocol-https-perl libmbedcrypto7 libmbedtls14 libmbedx509-1 298s libmodule-implementation-perl libmodule-runtime-conflicts-perl 298s libmodule-runtime-perl libmoose-perl libmro-compat-perl libnet-http-perl 298s libnet-ssleay-perl libnumber-compare-perl libpackage-deprecationmanager-perl 298s libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 298s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 298s libparams-classify-perl libparams-util-perl libparse-yapp-perl 298s libperlio-utf8-strict-perl libpixman-1-0 libset-object-perl libsharpyuv0 298s libsm6 libspiffy-perl libsub-exporter-perl libsub-exporter-progressive-perl 298s libsub-install-perl libsub-uplevel-perl libtcl8.6 libtest-deep-perl 298s libtest-differences-perl libtest-exception-perl libtest-file-perl 298s libtest-files-perl libtest-most-perl libtest-output-perl libtest-warn-perl 298s libtext-csv-perl libtext-diff-perl libtext-glob-perl libthai-data libthai0 298s libtiff6 libtimedate-perl libtingea0 libtk8.6 libtry-tiny-perl liburi-perl 298s libwebp7 libwww-perl libwww-robotrules-perl libxcb-render0 libxcb-shm0 298s libxft2 libxml-parser-perl libxml-writer-perl libxrender1 libxss1 libxt6 298s mafft mcl ncbi-blast+ ncbi-data parallel perl-openssl-defaults prank 298s r-base-core r-cran-cli r-cran-colorspace r-cran-fansi r-cran-farver 298s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-isoband r-cran-labeling 298s r-cran-lattice r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-matrix 298s r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig 298s r-cran-r6 r-cran-rcolorbrewer r-cran-rlang r-cran-scales r-cran-tibble 298s r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr roary unzip 298s x11-common xdg-utils zip 298s 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. 298s 1 not fully installed or removed. 298s Need to get 99.5 MB of archives. 298s After this operation, 259 MB of additional disk space will be used. 298s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 298s Get:2 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdata-stag-perl all 0.14-3 [372 kB] 298s Get:3 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbio-perl-perl all 1.7.8-1 [2580 kB] 299s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libclass-data-inheritable-perl all 0.08-3 [8084 B] 299s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libdevel-stacktrace-perl all 2.0500-1 [22.1 kB] 299s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libexception-class-perl all 1.45-1 [28.6 kB] 299s Get:7 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-deep-perl all 1.204-1 [47.1 kB] 299s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libcapture-tiny-perl all 0.48-2 [20.2 kB] 299s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libalgorithm-diff-perl all 1.201-1 [41.8 kB] 299s Get:10 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtext-diff-perl all 1.45-2 [25.6 kB] 299s Get:11 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-differences-perl all 0.71-1 [15.8 kB] 299s Get:12 http://ftpmaster.internal/ubuntu noble/universe ppc64el libsub-uplevel-perl all 0.2800-3 [11.6 kB] 299s Get:13 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-exception-perl all 0.43-3 [13.4 kB] 299s Get:14 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-warn-perl all 0.37-2 [12.6 kB] 299s Get:15 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-most-perl all 0.38-1 [21.5 kB] 299s Get:16 http://ftpmaster.internal/ubuntu noble/universe ppc64el bioperl all 1.7.8-1 [216 kB] 299s Get:17 http://ftpmaster.internal/ubuntu noble/universe ppc64el libarray-utils-perl all 0.5-3 [5862 B] 299s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libencode-locale-perl all 1.05-3 [11.6 kB] 299s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libtimedate-perl all 2.3300-2 [34.0 kB] 299s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-date-perl all 6.06-1 [10.2 kB] 299s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libfile-listing-perl all 6.16-1 [11.3 kB] 299s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-tagset-perl all 3.20-6 [11.3 kB] 299s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liburi-perl all 5.27-1 [88.0 kB] 299s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-parser-perl ppc64el 3.81-1build1 [91.3 kB] 299s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libhtml-tree-perl all 5.07-3 [200 kB] 299s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libclone-perl ppc64el 0.46-1build1 [11.1 kB] 299s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-html-perl all 1.004-3 [15.9 kB] 299s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el liblwp-mediatypes-perl all 6.04-2 [20.1 kB] 299s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-message-perl all 6.45-1ubuntu1 [78.2 kB] 299s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-cookies-perl all 6.11-1 [18.2 kB] 299s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el libhttp-negotiate-perl all 6.01-2 [12.4 kB] 299s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el perl-openssl-defaults ppc64el 7 [7534 B] 299s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el libnet-ssleay-perl ppc64el 1.94-1 [326 kB] 299s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-socket-ssl-perl all 2.085-1 [195 kB] 299s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el libnet-http-perl all 6.23-1 [22.3 kB] 299s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el liblwp-protocol-https-perl all 6.13-1 [9006 B] 299s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el libtry-tiny-perl all 0.31-2 [20.8 kB] 299s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el libwww-robotrules-perl all 6.02-1 [12.6 kB] 299s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libwww-perl all 6.76-1 [138 kB] 299s Get:40 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdigest-md5-file-perl all 0.08-1.1 [8968 B] 299s Get:41 http://ftpmaster.internal/ubuntu noble/universe ppc64el libenv-path-perl all 0.19-4 [18.0 kB] 299s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libnumber-compare-perl all 0.03-3 [5974 B] 299s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el libtext-glob-perl all 0.11-3 [6780 B] 299s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el libfile-find-rule-perl all 0.34-3 [24.4 kB] 299s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el libfile-grep-perl all 0.02-3 [8248 B] 299s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libfile-slurper-perl all 0.014-1 [7660 B] 299s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libfile-which-perl all 1.27-2 [12.5 kB] 299s Get:48 http://ftpmaster.internal/ubuntu noble/universe ppc64el libfindbin-libs-perl all 3.0.2-1 [22.3 kB] 299s Get:49 http://ftpmaster.internal/ubuntu noble/universe ppc64el libheap-perl all 0.80-5 [33.8 kB] 299s Get:50 http://ftpmaster.internal/ubuntu noble/universe ppc64el libset-object-perl ppc64el 1.42-1build3 [35.4 kB] 299s Get:51 http://ftpmaster.internal/ubuntu noble/universe ppc64el libgraph-perl all 1:0.9727-1 [100 kB] 299s Get:52 http://ftpmaster.internal/ubuntu noble/universe ppc64el libspiffy-perl all 0.46-1 [23.9 kB] 299s Get:53 http://ftpmaster.internal/ubuntu noble/universe ppc64el libio-all-perl all 0.87-2 [61.3 kB] 299s Get:54 http://ftpmaster.internal/ubuntu noble/universe ppc64el libparse-yapp-perl all 1.21-3 [38.0 kB] 299s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libxml-parser-perl ppc64el 2.47-1build1 [207 kB] 299s Get:56 http://ftpmaster.internal/ubuntu noble/universe ppc64el libxml-writer-perl all 0.900-2 [24.0 kB] 299s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el libgraph-readwrite-perl all 2.10-1 [44.0 kB] 299s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblog-log4perl-perl all 1.57-1 [345 kB] 299s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libparams-util-perl ppc64el 1.102-2build1 [21.1 kB] 299s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libsub-install-perl all 0.929-1 [9764 B] 299s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libdata-optlist-perl all 0.114-1 [9708 B] 299s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libb-hooks-op-check-perl ppc64el 0.22-2build2 [9726 B] 299s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libdynaloader-functions-perl all 0.003-3 [12.1 kB] 299s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libdevel-callchecker-perl ppc64el 0.008-2build1 [13.8 kB] 299s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libparams-classify-perl ppc64el 0.015-2build3 [21.8 kB] 299s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libmodule-runtime-perl all 0.016-2 [16.4 kB] 299s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libmodule-implementation-perl all 0.09-2 [12.0 kB] 299s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libpackage-stash-perl all 0.40-1 [19.5 kB] 299s Get:69 http://ftpmaster.internal/ubuntu noble/universe ppc64el libclass-load-perl all 0.25-2 [12.7 kB] 299s Get:70 http://ftpmaster.internal/ubuntu noble/universe ppc64el libclass-load-xs-perl ppc64el 0.10-2build2 [13.7 kB] 299s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libsub-exporter-progressive-perl all 0.001013-3 [6718 B] 299s Get:72 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdevel-globaldestruction-perl all 0.14-4 [6114 B] 299s Get:73 http://ftpmaster.internal/ubuntu noble/universe ppc64el libalgorithm-c3-perl all 0.11-2 [10.2 kB] 299s Get:74 http://ftpmaster.internal/ubuntu noble/universe ppc64el libclass-c3-perl all 0.35-2 [18.4 kB] 299s Get:75 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmro-compat-perl all 0.15-2 [10.1 kB] 299s Get:76 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdevel-overloadinfo-perl all 0.007-1 [7422 B] 299s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libsub-exporter-perl all 0.990-1 [49.0 kB] 299s Get:78 http://ftpmaster.internal/ubuntu noble/universe ppc64el libeval-closure-perl all 0.14-3 [10.1 kB] 299s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el libdist-checkconflicts-perl all 0.11-2 [9942 B] 299s Get:80 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmodule-runtime-conflicts-perl all 0.003-2 [6956 B] 299s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpackage-deprecationmanager-perl all 0.18-1 [16.7 kB] 299s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el libpackage-stash-xs-perl ppc64el 0.30-1build2 [20.2 kB] 299s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmoose-perl ppc64el 2.2207-1 [718 kB] 299s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libperlio-utf8-strict-perl ppc64el 0.010-1build1 [12.0 kB] 299s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-file-perl all 1.993-1 [20.7 kB] 299s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-files-perl all 0.15-1 [9744 B] 299s Get:87 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtest-output-perl all 1.034-1 [14.2 kB] 299s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtext-csv-perl all 2.04-1 [109 kB] 299s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el bedtools ppc64el 2.31.1+dfsg-2 [782 kB] 299s Get:90 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 299s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el cd-hit ppc64el 4.8.1-4 [547 kB] 299s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el ncbi-data all 6.1.20170106+dfsg1-10 [4395 kB] 300s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedcrypto7 ppc64el 2.28.7-1ubuntu1 [262 kB] 300s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedx509-1 ppc64el 2.28.7-1ubuntu1 [51.4 kB] 300s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el libmbedtls14 ppc64el 2.28.7-1ubuntu1 [89.7 kB] 300s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el ncbi-blast+ ppc64el 2.12.0+ds-4 [13.4 MB] 300s Get:97 http://ftpmaster.internal/ubuntu noble/universe ppc64el libtingea0 ppc64el 21-361-2 [67.3 kB] 300s Get:98 http://ftpmaster.internal/ubuntu noble/universe ppc64el mcl ppc64el 1:22-282+ds-2 [683 kB] 300s Get:99 http://ftpmaster.internal/ubuntu noble/universe ppc64el parallel all 20231122+ds-1 [1944 kB] 300s Get:100 http://ftpmaster.internal/ubuntu noble/universe ppc64el prank ppc64el 0.0.170427+dfsg-3 [353 kB] 300s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 300s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 300s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 300s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 300s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 300s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 301s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 301s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 301s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 301s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 301s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 301s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 301s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 301s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 301s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 301s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 301s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 301s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 301s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 301s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 301s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 301s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 301s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 301s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 301s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 301s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 301s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 301s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 301s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 301s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 301s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 301s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 301s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 301s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 301s Get:135 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 301s Get:136 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 301s Get:137 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 301s Get:138 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 301s Get:139 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 301s Get:140 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 301s Get:141 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 301s Get:142 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 301s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 304s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 304s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 304s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 304s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 304s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 304s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 304s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 304s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 304s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 304s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 305s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 305s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 305s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 305s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 305s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 305s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 305s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 305s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 305s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 305s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 305s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 305s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 305s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 306s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 306s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 306s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 306s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 306s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 306s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el mafft ppc64el 7.505-1 [990 kB] 306s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el fasttree ppc64el 2.1.11-2 [218 kB] 306s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el roary all 3.13.0+dfsg-1 [172 kB] 307s Preconfiguring packages ... 307s Fetched 99.5 MB in 8s (12.3 MB/s) 307s Selecting previously unselected package libio-string-perl. 307s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 69670 files and directories currently installed.) 307s Preparing to unpack .../000-libio-string-perl_1.08-4_all.deb ... 307s Unpacking libio-string-perl (1.08-4) ... 307s Selecting previously unselected package libdata-stag-perl. 307s Preparing to unpack .../001-libdata-stag-perl_0.14-3_all.deb ... 307s Unpacking libdata-stag-perl (0.14-3) ... 307s Selecting previously unselected package libbio-perl-perl. 307s Preparing to unpack .../002-libbio-perl-perl_1.7.8-1_all.deb ... 307s Unpacking libbio-perl-perl (1.7.8-1) ... 307s Selecting previously unselected package libclass-data-inheritable-perl. 307s Preparing to unpack .../003-libclass-data-inheritable-perl_0.08-3_all.deb ... 307s Unpacking libclass-data-inheritable-perl (0.08-3) ... 307s Selecting previously unselected package libdevel-stacktrace-perl. 307s Preparing to unpack .../004-libdevel-stacktrace-perl_2.0500-1_all.deb ... 307s Unpacking libdevel-stacktrace-perl (2.0500-1) ... 307s Selecting previously unselected package libexception-class-perl. 307s Preparing to unpack .../005-libexception-class-perl_1.45-1_all.deb ... 307s Unpacking libexception-class-perl (1.45-1) ... 307s Selecting previously unselected package libtest-deep-perl. 307s Preparing to unpack .../006-libtest-deep-perl_1.204-1_all.deb ... 307s Unpacking libtest-deep-perl (1.204-1) ... 307s Selecting previously unselected package libcapture-tiny-perl. 307s Preparing to unpack .../007-libcapture-tiny-perl_0.48-2_all.deb ... 307s Unpacking libcapture-tiny-perl (0.48-2) ... 307s Selecting previously unselected package libalgorithm-diff-perl. 307s Preparing to unpack .../008-libalgorithm-diff-perl_1.201-1_all.deb ... 307s Unpacking libalgorithm-diff-perl (1.201-1) ... 307s Selecting previously unselected package libtext-diff-perl. 307s Preparing to unpack .../009-libtext-diff-perl_1.45-2_all.deb ... 307s Unpacking libtext-diff-perl (1.45-2) ... 307s Selecting previously unselected package libtest-differences-perl. 307s Preparing to unpack .../010-libtest-differences-perl_0.71-1_all.deb ... 307s Unpacking libtest-differences-perl (0.71-1) ... 307s Selecting previously unselected package libsub-uplevel-perl. 307s Preparing to unpack .../011-libsub-uplevel-perl_0.2800-3_all.deb ... 307s Unpacking libsub-uplevel-perl (0.2800-3) ... 307s Selecting previously unselected package libtest-exception-perl. 307s Preparing to unpack .../012-libtest-exception-perl_0.43-3_all.deb ... 307s Unpacking libtest-exception-perl (0.43-3) ... 307s Selecting previously unselected package libtest-warn-perl. 307s Preparing to unpack .../013-libtest-warn-perl_0.37-2_all.deb ... 307s Unpacking libtest-warn-perl (0.37-2) ... 307s Selecting previously unselected package libtest-most-perl. 307s Preparing to unpack .../014-libtest-most-perl_0.38-1_all.deb ... 307s Unpacking libtest-most-perl (0.38-1) ... 307s Selecting previously unselected package bioperl. 307s Preparing to unpack .../015-bioperl_1.7.8-1_all.deb ... 307s Unpacking bioperl (1.7.8-1) ... 307s Selecting previously unselected package libarray-utils-perl. 307s Preparing to unpack .../016-libarray-utils-perl_0.5-3_all.deb ... 307s Unpacking libarray-utils-perl (0.5-3) ... 307s Selecting previously unselected package libencode-locale-perl. 307s Preparing to unpack .../017-libencode-locale-perl_1.05-3_all.deb ... 307s Unpacking libencode-locale-perl (1.05-3) ... 308s Selecting previously unselected package libtimedate-perl. 308s Preparing to unpack .../018-libtimedate-perl_2.3300-2_all.deb ... 308s Unpacking libtimedate-perl (2.3300-2) ... 308s Selecting previously unselected package libhttp-date-perl. 308s Preparing to unpack .../019-libhttp-date-perl_6.06-1_all.deb ... 308s Unpacking libhttp-date-perl (6.06-1) ... 308s Selecting previously unselected package libfile-listing-perl. 308s Preparing to unpack .../020-libfile-listing-perl_6.16-1_all.deb ... 308s Unpacking libfile-listing-perl (6.16-1) ... 308s Selecting previously unselected package libhtml-tagset-perl. 308s Preparing to unpack .../021-libhtml-tagset-perl_3.20-6_all.deb ... 308s Unpacking libhtml-tagset-perl (3.20-6) ... 308s Selecting previously unselected package liburi-perl. 308s Preparing to unpack .../022-liburi-perl_5.27-1_all.deb ... 308s Unpacking liburi-perl (5.27-1) ... 308s Selecting previously unselected package libhtml-parser-perl:ppc64el. 308s Preparing to unpack .../023-libhtml-parser-perl_3.81-1build1_ppc64el.deb ... 308s Unpacking libhtml-parser-perl:ppc64el (3.81-1build1) ... 308s Selecting previously unselected package libhtml-tree-perl. 308s Preparing to unpack .../024-libhtml-tree-perl_5.07-3_all.deb ... 308s Unpacking libhtml-tree-perl (5.07-3) ... 308s Selecting previously unselected package libclone-perl:ppc64el. 308s Preparing to unpack .../025-libclone-perl_0.46-1build1_ppc64el.deb ... 308s Unpacking libclone-perl:ppc64el (0.46-1build1) ... 308s Selecting previously unselected package libio-html-perl. 308s Preparing to unpack .../026-libio-html-perl_1.004-3_all.deb ... 308s Unpacking libio-html-perl (1.004-3) ... 308s Selecting previously unselected package liblwp-mediatypes-perl. 308s Preparing to unpack .../027-liblwp-mediatypes-perl_6.04-2_all.deb ... 308s Unpacking liblwp-mediatypes-perl (6.04-2) ... 308s Selecting previously unselected package libhttp-message-perl. 308s Preparing to unpack .../028-libhttp-message-perl_6.45-1ubuntu1_all.deb ... 308s Unpacking libhttp-message-perl (6.45-1ubuntu1) ... 308s Selecting previously unselected package libhttp-cookies-perl. 308s Preparing to unpack .../029-libhttp-cookies-perl_6.11-1_all.deb ... 308s Unpacking libhttp-cookies-perl (6.11-1) ... 308s Selecting previously unselected package libhttp-negotiate-perl. 308s Preparing to unpack .../030-libhttp-negotiate-perl_6.01-2_all.deb ... 308s Unpacking libhttp-negotiate-perl (6.01-2) ... 308s Selecting previously unselected package perl-openssl-defaults:ppc64el. 308s Preparing to unpack .../031-perl-openssl-defaults_7_ppc64el.deb ... 308s Unpacking perl-openssl-defaults:ppc64el (7) ... 308s Selecting previously unselected package libnet-ssleay-perl:ppc64el. 308s Preparing to unpack .../032-libnet-ssleay-perl_1.94-1_ppc64el.deb ... 308s Unpacking libnet-ssleay-perl:ppc64el (1.94-1) ... 308s Selecting previously unselected package libio-socket-ssl-perl. 308s Preparing to unpack .../033-libio-socket-ssl-perl_2.085-1_all.deb ... 308s Unpacking libio-socket-ssl-perl (2.085-1) ... 308s Selecting previously unselected package libnet-http-perl. 308s Preparing to unpack .../034-libnet-http-perl_6.23-1_all.deb ... 308s Unpacking libnet-http-perl (6.23-1) ... 308s Selecting previously unselected package liblwp-protocol-https-perl. 308s Preparing to unpack .../035-liblwp-protocol-https-perl_6.13-1_all.deb ... 308s Unpacking liblwp-protocol-https-perl (6.13-1) ... 308s Selecting previously unselected package libtry-tiny-perl. 308s Preparing to unpack .../036-libtry-tiny-perl_0.31-2_all.deb ... 308s Unpacking libtry-tiny-perl (0.31-2) ... 308s Selecting previously unselected package libwww-robotrules-perl. 308s Preparing to unpack .../037-libwww-robotrules-perl_6.02-1_all.deb ... 308s Unpacking libwww-robotrules-perl (6.02-1) ... 308s Selecting previously unselected package libwww-perl. 308s Preparing to unpack .../038-libwww-perl_6.76-1_all.deb ... 308s Unpacking libwww-perl (6.76-1) ... 308s Selecting previously unselected package libdigest-md5-file-perl. 308s Preparing to unpack .../039-libdigest-md5-file-perl_0.08-1.1_all.deb ... 308s Unpacking libdigest-md5-file-perl (0.08-1.1) ... 308s Selecting previously unselected package libenv-path-perl. 308s Preparing to unpack .../040-libenv-path-perl_0.19-4_all.deb ... 308s Unpacking libenv-path-perl (0.19-4) ... 308s Selecting previously unselected package libnumber-compare-perl. 308s Preparing to unpack .../041-libnumber-compare-perl_0.03-3_all.deb ... 308s Unpacking libnumber-compare-perl (0.03-3) ... 308s Selecting previously unselected package libtext-glob-perl. 308s Preparing to unpack .../042-libtext-glob-perl_0.11-3_all.deb ... 308s Unpacking libtext-glob-perl (0.11-3) ... 308s Selecting previously unselected package libfile-find-rule-perl. 308s Preparing to unpack .../043-libfile-find-rule-perl_0.34-3_all.deb ... 308s Unpacking libfile-find-rule-perl (0.34-3) ... 308s Selecting previously unselected package libfile-grep-perl. 308s Preparing to unpack .../044-libfile-grep-perl_0.02-3_all.deb ... 308s Unpacking libfile-grep-perl (0.02-3) ... 308s Selecting previously unselected package libfile-slurper-perl. 308s Preparing to unpack .../045-libfile-slurper-perl_0.014-1_all.deb ... 308s Unpacking libfile-slurper-perl (0.014-1) ... 308s Selecting previously unselected package libfile-which-perl. 308s Preparing to unpack .../046-libfile-which-perl_1.27-2_all.deb ... 308s Unpacking libfile-which-perl (1.27-2) ... 308s Selecting previously unselected package libfindbin-libs-perl. 308s Preparing to unpack .../047-libfindbin-libs-perl_3.0.2-1_all.deb ... 308s Unpacking libfindbin-libs-perl (3.0.2-1) ... 308s Selecting previously unselected package libheap-perl. 308s Preparing to unpack .../048-libheap-perl_0.80-5_all.deb ... 308s Unpacking libheap-perl (0.80-5) ... 308s Selecting previously unselected package libset-object-perl. 308s Preparing to unpack .../049-libset-object-perl_1.42-1build3_ppc64el.deb ... 308s Unpacking libset-object-perl (1.42-1build3) ... 308s Selecting previously unselected package libgraph-perl. 308s Preparing to unpack .../050-libgraph-perl_1%3a0.9727-1_all.deb ... 308s Unpacking libgraph-perl (1:0.9727-1) ... 308s Selecting previously unselected package libspiffy-perl. 308s Preparing to unpack .../051-libspiffy-perl_0.46-1_all.deb ... 308s Unpacking libspiffy-perl (0.46-1) ... 308s Selecting previously unselected package libio-all-perl. 308s Preparing to unpack .../052-libio-all-perl_0.87-2_all.deb ... 308s Unpacking libio-all-perl (0.87-2) ... 308s Selecting previously unselected package libparse-yapp-perl. 308s Preparing to unpack .../053-libparse-yapp-perl_1.21-3_all.deb ... 308s Unpacking libparse-yapp-perl (1.21-3) ... 308s Selecting previously unselected package libxml-parser-perl. 308s Preparing to unpack .../054-libxml-parser-perl_2.47-1build1_ppc64el.deb ... 308s Unpacking libxml-parser-perl (2.47-1build1) ... 308s Selecting previously unselected package libxml-writer-perl. 308s Preparing to unpack .../055-libxml-writer-perl_0.900-2_all.deb ... 308s Unpacking libxml-writer-perl (0.900-2) ... 308s Selecting previously unselected package libgraph-readwrite-perl. 308s Preparing to unpack .../056-libgraph-readwrite-perl_2.10-1_all.deb ... 308s Unpacking libgraph-readwrite-perl (2.10-1) ... 308s Selecting previously unselected package liblog-log4perl-perl. 308s Preparing to unpack .../057-liblog-log4perl-perl_1.57-1_all.deb ... 308s Unpacking liblog-log4perl-perl (1.57-1) ... 308s Selecting previously unselected package libparams-util-perl. 308s Preparing to unpack .../058-libparams-util-perl_1.102-2build1_ppc64el.deb ... 308s Unpacking libparams-util-perl (1.102-2build1) ... 308s Selecting previously unselected package libsub-install-perl. 308s Preparing to unpack .../059-libsub-install-perl_0.929-1_all.deb ... 308s Unpacking libsub-install-perl (0.929-1) ... 308s Selecting previously unselected package libdata-optlist-perl. 308s Preparing to unpack .../060-libdata-optlist-perl_0.114-1_all.deb ... 308s Unpacking libdata-optlist-perl (0.114-1) ... 308s Selecting previously unselected package libb-hooks-op-check-perl:ppc64el. 308s Preparing to unpack .../061-libb-hooks-op-check-perl_0.22-2build2_ppc64el.deb ... 308s Unpacking libb-hooks-op-check-perl:ppc64el (0.22-2build2) ... 308s Selecting previously unselected package libdynaloader-functions-perl. 308s Preparing to unpack .../062-libdynaloader-functions-perl_0.003-3_all.deb ... 308s Unpacking libdynaloader-functions-perl (0.003-3) ... 308s Selecting previously unselected package libdevel-callchecker-perl:ppc64el. 308s Preparing to unpack .../063-libdevel-callchecker-perl_0.008-2build1_ppc64el.deb ... 308s Unpacking libdevel-callchecker-perl:ppc64el (0.008-2build1) ... 308s Selecting previously unselected package libparams-classify-perl:ppc64el. 308s Preparing to unpack .../064-libparams-classify-perl_0.015-2build3_ppc64el.deb ... 308s Unpacking libparams-classify-perl:ppc64el (0.015-2build3) ... 308s Selecting previously unselected package libmodule-runtime-perl. 308s Preparing to unpack .../065-libmodule-runtime-perl_0.016-2_all.deb ... 308s Unpacking libmodule-runtime-perl (0.016-2) ... 308s Selecting previously unselected package libmodule-implementation-perl. 308s Preparing to unpack .../066-libmodule-implementation-perl_0.09-2_all.deb ... 308s Unpacking libmodule-implementation-perl (0.09-2) ... 308s Selecting previously unselected package libpackage-stash-perl. 308s Preparing to unpack .../067-libpackage-stash-perl_0.40-1_all.deb ... 308s Unpacking libpackage-stash-perl (0.40-1) ... 308s Selecting previously unselected package libclass-load-perl. 308s Preparing to unpack .../068-libclass-load-perl_0.25-2_all.deb ... 308s Unpacking libclass-load-perl (0.25-2) ... 308s Selecting previously unselected package libclass-load-xs-perl. 308s Preparing to unpack .../069-libclass-load-xs-perl_0.10-2build2_ppc64el.deb ... 308s Unpacking libclass-load-xs-perl (0.10-2build2) ... 308s Selecting previously unselected package libsub-exporter-progressive-perl. 308s Preparing to unpack .../070-libsub-exporter-progressive-perl_0.001013-3_all.deb ... 308s Unpacking libsub-exporter-progressive-perl (0.001013-3) ... 308s Selecting previously unselected package libdevel-globaldestruction-perl. 308s Preparing to unpack .../071-libdevel-globaldestruction-perl_0.14-4_all.deb ... 308s Unpacking libdevel-globaldestruction-perl (0.14-4) ... 308s Selecting previously unselected package libalgorithm-c3-perl. 308s Preparing to unpack .../072-libalgorithm-c3-perl_0.11-2_all.deb ... 308s Unpacking libalgorithm-c3-perl (0.11-2) ... 308s Selecting previously unselected package libclass-c3-perl. 308s Preparing to unpack .../073-libclass-c3-perl_0.35-2_all.deb ... 308s Unpacking libclass-c3-perl (0.35-2) ... 308s Selecting previously unselected package libmro-compat-perl. 308s Preparing to unpack .../074-libmro-compat-perl_0.15-2_all.deb ... 308s Unpacking libmro-compat-perl (0.15-2) ... 308s Selecting previously unselected package libdevel-overloadinfo-perl. 308s Preparing to unpack .../075-libdevel-overloadinfo-perl_0.007-1_all.deb ... 308s Unpacking libdevel-overloadinfo-perl (0.007-1) ... 309s Selecting previously unselected package libsub-exporter-perl. 309s Preparing to unpack .../076-libsub-exporter-perl_0.990-1_all.deb ... 309s Unpacking libsub-exporter-perl (0.990-1) ... 309s Selecting previously unselected package libeval-closure-perl. 309s Preparing to unpack .../077-libeval-closure-perl_0.14-3_all.deb ... 309s Unpacking libeval-closure-perl (0.14-3) ... 309s Selecting previously unselected package libdist-checkconflicts-perl. 309s Preparing to unpack .../078-libdist-checkconflicts-perl_0.11-2_all.deb ... 309s Unpacking libdist-checkconflicts-perl (0.11-2) ... 309s Selecting previously unselected package libmodule-runtime-conflicts-perl. 309s Preparing to unpack .../079-libmodule-runtime-conflicts-perl_0.003-2_all.deb ... 309s Unpacking libmodule-runtime-conflicts-perl (0.003-2) ... 309s Selecting previously unselected package libpackage-deprecationmanager-perl. 309s Preparing to unpack .../080-libpackage-deprecationmanager-perl_0.18-1_all.deb ... 309s Unpacking libpackage-deprecationmanager-perl (0.18-1) ... 309s Selecting previously unselected package libpackage-stash-xs-perl:ppc64el. 309s Preparing to unpack .../081-libpackage-stash-xs-perl_0.30-1build2_ppc64el.deb ... 309s Unpacking libpackage-stash-xs-perl:ppc64el (0.30-1build2) ... 309s Selecting previously unselected package libmoose-perl:ppc64el. 309s Preparing to unpack .../082-libmoose-perl_2.2207-1_ppc64el.deb ... 309s Unpacking libmoose-perl:ppc64el (2.2207-1) ... 309s Selecting previously unselected package libperlio-utf8-strict-perl. 309s Preparing to unpack .../083-libperlio-utf8-strict-perl_0.010-1build1_ppc64el.deb ... 309s Unpacking libperlio-utf8-strict-perl (0.010-1build1) ... 309s Selecting previously unselected package libtest-file-perl. 309s Preparing to unpack .../084-libtest-file-perl_1.993-1_all.deb ... 309s Unpacking libtest-file-perl (1.993-1) ... 309s Selecting previously unselected package libtest-files-perl. 309s Preparing to unpack .../085-libtest-files-perl_0.15-1_all.deb ... 309s Unpacking libtest-files-perl (0.15-1) ... 309s Selecting previously unselected package libtest-output-perl. 309s Preparing to unpack .../086-libtest-output-perl_1.034-1_all.deb ... 309s Unpacking libtest-output-perl (1.034-1) ... 309s Selecting previously unselected package libtext-csv-perl. 309s Preparing to unpack .../087-libtext-csv-perl_2.04-1_all.deb ... 309s Unpacking libtext-csv-perl (2.04-1) ... 309s Selecting previously unselected package bedtools. 309s Preparing to unpack .../088-bedtools_2.31.1+dfsg-2_ppc64el.deb ... 309s Unpacking bedtools (2.31.1+dfsg-2) ... 309s Selecting previously unselected package libgomp1:ppc64el. 309s Preparing to unpack .../089-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 309s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 309s Selecting previously unselected package cd-hit. 309s Preparing to unpack .../090-cd-hit_4.8.1-4_ppc64el.deb ... 309s Unpacking cd-hit (4.8.1-4) ... 309s Selecting previously unselected package ncbi-data. 309s Preparing to unpack .../091-ncbi-data_6.1.20170106+dfsg1-10_all.deb ... 309s Unpacking ncbi-data (6.1.20170106+dfsg1-10) ... 309s Selecting previously unselected package libmbedcrypto7:ppc64el. 309s Preparing to unpack .../092-libmbedcrypto7_2.28.7-1ubuntu1_ppc64el.deb ... 309s Unpacking libmbedcrypto7:ppc64el (2.28.7-1ubuntu1) ... 309s Selecting previously unselected package libmbedx509-1:ppc64el. 309s Preparing to unpack .../093-libmbedx509-1_2.28.7-1ubuntu1_ppc64el.deb ... 309s Unpacking libmbedx509-1:ppc64el (2.28.7-1ubuntu1) ... 309s Selecting previously unselected package libmbedtls14:ppc64el. 309s Preparing to unpack .../094-libmbedtls14_2.28.7-1ubuntu1_ppc64el.deb ... 309s Unpacking libmbedtls14:ppc64el (2.28.7-1ubuntu1) ... 309s Selecting previously unselected package ncbi-blast+. 309s Preparing to unpack .../095-ncbi-blast+_2.12.0+ds-4_ppc64el.deb ... 309s Unpacking ncbi-blast+ (2.12.0+ds-4) ... 310s Selecting previously unselected package libtingea0:ppc64el. 310s Preparing to unpack .../096-libtingea0_21-361-2_ppc64el.deb ... 310s Unpacking libtingea0:ppc64el (21-361-2) ... 310s Selecting previously unselected package mcl. 310s Preparing to unpack .../097-mcl_1%3a22-282+ds-2_ppc64el.deb ... 310s Unpacking mcl (1:22-282+ds-2) ... 310s Selecting previously unselected package parallel. 310s Preparing to unpack .../098-parallel_20231122+ds-1_all.deb ... 310s Adding 'diversion of /usr/bin/parallel to /usr/bin/parallel.moreutils by parallel' 310s Adding 'diversion of /usr/share/man/man1/parallel.1.gz to /usr/share/man/man1/parallel.moreutils.1.gz by parallel' 310s Unpacking parallel (20231122+ds-1) ... 310s Selecting previously unselected package prank. 310s Preparing to unpack .../099-prank_0.0.170427+dfsg-3_ppc64el.deb ... 310s Unpacking prank (0.0.170427+dfsg-3) ... 310s Selecting previously unselected package zip. 310s Preparing to unpack .../100-zip_3.0-13_ppc64el.deb ... 310s Unpacking zip (3.0-13) ... 310s Selecting previously unselected package unzip. 310s Preparing to unpack .../101-unzip_6.0-28ubuntu3_ppc64el.deb ... 310s Unpacking unzip (6.0-28ubuntu3) ... 310s Selecting previously unselected package libpaper1:ppc64el. 310s Preparing to unpack .../102-libpaper1_1.1.29_ppc64el.deb ... 310s Unpacking libpaper1:ppc64el (1.1.29) ... 310s Selecting previously unselected package libpaper-utils. 310s Preparing to unpack .../103-libpaper-utils_1.1.29_ppc64el.deb ... 310s Unpacking libpaper-utils (1.1.29) ... 310s Selecting previously unselected package xdg-utils. 310s Preparing to unpack .../104-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 310s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 310s Selecting previously unselected package libblas3:ppc64el. 310s Preparing to unpack .../105-libblas3_3.12.0-3_ppc64el.deb ... 310s Unpacking libblas3:ppc64el (3.12.0-3) ... 310s Selecting previously unselected package fonts-dejavu-mono. 310s Preparing to unpack .../106-fonts-dejavu-mono_2.37-8_all.deb ... 310s Unpacking fonts-dejavu-mono (2.37-8) ... 310s Selecting previously unselected package fonts-dejavu-core. 310s Preparing to unpack .../107-fonts-dejavu-core_2.37-8_all.deb ... 310s Unpacking fonts-dejavu-core (2.37-8) ... 310s Selecting previously unselected package fontconfig-config. 310s Preparing to unpack .../108-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 310s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 310s Selecting previously unselected package libfontconfig1:ppc64el. 310s Preparing to unpack .../109-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 310s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 310s Selecting previously unselected package libpixman-1-0:ppc64el. 310s Preparing to unpack .../110-libpixman-1-0_0.42.2-1_ppc64el.deb ... 310s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 310s Selecting previously unselected package libxcb-render0:ppc64el. 310s Preparing to unpack .../111-libxcb-render0_1.15-1_ppc64el.deb ... 310s Unpacking libxcb-render0:ppc64el (1.15-1) ... 310s Selecting previously unselected package libxcb-shm0:ppc64el. 310s Preparing to unpack .../112-libxcb-shm0_1.15-1_ppc64el.deb ... 310s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 310s Selecting previously unselected package libxrender1:ppc64el. 310s Preparing to unpack .../113-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 310s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 310s Selecting previously unselected package libcairo2:ppc64el. 310s Preparing to unpack .../114-libcairo2_1.18.0-1_ppc64el.deb ... 310s Unpacking libcairo2:ppc64el (1.18.0-1) ... 310s Selecting previously unselected package libjpeg-turbo8:ppc64el. 310s Preparing to unpack .../115-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 310s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 310s Selecting previously unselected package libjpeg8:ppc64el. 310s Preparing to unpack .../116-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 310s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 310s Selecting previously unselected package libgfortran5:ppc64el. 310s Preparing to unpack .../117-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 310s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 310s Selecting previously unselected package liblapack3:ppc64el. 310s Preparing to unpack .../118-liblapack3_3.12.0-3_ppc64el.deb ... 310s Unpacking liblapack3:ppc64el (3.12.0-3) ... 310s Selecting previously unselected package fontconfig. 310s Preparing to unpack .../119-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 310s Unpacking fontconfig (2.15.0-1ubuntu1) ... 310s Selecting previously unselected package libgraphite2-3:ppc64el. 310s Preparing to unpack .../120-libgraphite2-3_1.3.14-2_ppc64el.deb ... 310s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 310s Selecting previously unselected package libharfbuzz0b:ppc64el. 310s Preparing to unpack .../121-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 310s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 310s Selecting previously unselected package libthai-data. 310s Preparing to unpack .../122-libthai-data_0.1.29-2_all.deb ... 310s Unpacking libthai-data (0.1.29-2) ... 310s Selecting previously unselected package libdatrie1:ppc64el. 310s Preparing to unpack .../123-libdatrie1_0.2.13-3_ppc64el.deb ... 310s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 310s Selecting previously unselected package libthai0:ppc64el. 310s Preparing to unpack .../124-libthai0_0.1.29-2_ppc64el.deb ... 310s Unpacking libthai0:ppc64el (0.1.29-2) ... 310s Selecting previously unselected package libpango-1.0-0:ppc64el. 310s Preparing to unpack .../125-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 310s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 310s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 310s Preparing to unpack .../126-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 310s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 310s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 310s Preparing to unpack .../127-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 310s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 310s Selecting previously unselected package libtcl8.6:ppc64el. 310s Preparing to unpack .../128-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 310s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 310s Selecting previously unselected package libdeflate0:ppc64el. 311s Preparing to unpack .../129-libdeflate0_1.19-1_ppc64el.deb ... 311s Unpacking libdeflate0:ppc64el (1.19-1) ... 311s Selecting previously unselected package libjbig0:ppc64el. 311s Preparing to unpack .../130-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 311s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 311s Selecting previously unselected package liblerc4:ppc64el. 311s Preparing to unpack .../131-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 311s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 311s Selecting previously unselected package libsharpyuv0:ppc64el. 311s Preparing to unpack .../132-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 311s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 311s Selecting previously unselected package libwebp7:ppc64el. 311s Preparing to unpack .../133-libwebp7_1.3.2-0.4_ppc64el.deb ... 311s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 311s Selecting previously unselected package libtiff6:ppc64el. 311s Preparing to unpack .../134-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 311s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 311s Selecting previously unselected package libxft2:ppc64el. 311s Preparing to unpack .../135-libxft2_2.3.6-1_ppc64el.deb ... 311s Unpacking libxft2:ppc64el (2.3.6-1) ... 311s Selecting previously unselected package x11-common. 311s Preparing to unpack .../136-x11-common_1%3a7.7+23ubuntu2_all.deb ... 311s Unpacking x11-common (1:7.7+23ubuntu2) ... 311s Selecting previously unselected package libxss1:ppc64el. 311s Preparing to unpack .../137-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 311s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 311s Selecting previously unselected package libtk8.6:ppc64el. 311s Preparing to unpack .../138-libtk8.6_8.6.13-2_ppc64el.deb ... 311s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 311s Selecting previously unselected package libice6:ppc64el. 311s Preparing to unpack .../139-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 311s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 311s Selecting previously unselected package libsm6:ppc64el. 311s Preparing to unpack .../140-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 311s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 311s Selecting previously unselected package libxt6:ppc64el. 311s Preparing to unpack .../141-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 311s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 311s Selecting previously unselected package r-base-core. 311s Preparing to unpack .../142-r-base-core_4.3.2-1build1_ppc64el.deb ... 311s Unpacking r-base-core (4.3.2-1build1) ... 311s Selecting previously unselected package r-cran-cli. 311s Preparing to unpack .../143-r-cran-cli_3.6.2-1_ppc64el.deb ... 311s Unpacking r-cran-cli (3.6.2-1) ... 311s Selecting previously unselected package r-cran-glue. 311s Preparing to unpack .../144-r-cran-glue_1.7.0-1_ppc64el.deb ... 311s Unpacking r-cran-glue (1.7.0-1) ... 311s Selecting previously unselected package r-cran-rlang. 311s Preparing to unpack .../145-r-cran-rlang_1.1.3-1_ppc64el.deb ... 311s Unpacking r-cran-rlang (1.1.3-1) ... 311s Selecting previously unselected package r-cran-lifecycle. 311s Preparing to unpack .../146-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 311s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 311s Selecting previously unselected package r-cran-gtable. 311s Preparing to unpack .../147-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 311s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 311s Selecting previously unselected package r-cran-isoband. 311s Preparing to unpack .../148-r-cran-isoband_0.2.7-1_ppc64el.deb ... 311s Unpacking r-cran-isoband (0.2.7-1) ... 311s Selecting previously unselected package r-cran-mass. 311s Preparing to unpack .../149-r-cran-mass_7.3-60.0.1-1_ppc64el.deb ... 311s Unpacking r-cran-mass (7.3-60.0.1-1) ... 311s Selecting previously unselected package r-cran-lattice. 311s Preparing to unpack .../150-r-cran-lattice_0.22-5-1_ppc64el.deb ... 311s Unpacking r-cran-lattice (0.22-5-1) ... 311s Selecting previously unselected package r-cran-nlme. 311s Preparing to unpack .../151-r-cran-nlme_3.1.164-1_ppc64el.deb ... 311s Unpacking r-cran-nlme (3.1.164-1) ... 311s Selecting previously unselected package r-cran-matrix. 311s Preparing to unpack .../152-r-cran-matrix_1.6-5-1_ppc64el.deb ... 311s Unpacking r-cran-matrix (1.6-5-1) ... 312s Selecting previously unselected package r-cran-mgcv. 312s Preparing to unpack .../153-r-cran-mgcv_1.9-1-1_ppc64el.deb ... 312s Unpacking r-cran-mgcv (1.9-1-1) ... 312s Selecting previously unselected package r-cran-farver. 312s Preparing to unpack .../154-r-cran-farver_2.1.1-1_ppc64el.deb ... 312s Unpacking r-cran-farver (2.1.1-1) ... 312s Selecting previously unselected package r-cran-labeling. 312s Preparing to unpack .../155-r-cran-labeling_0.4.3-1_all.deb ... 312s Unpacking r-cran-labeling (0.4.3-1) ... 312s Selecting previously unselected package r-cran-colorspace. 312s Preparing to unpack .../156-r-cran-colorspace_2.1-0+dfsg-1_ppc64el.deb ... 312s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 312s Selecting previously unselected package r-cran-munsell. 312s Preparing to unpack .../157-r-cran-munsell_0.5.0-2build1_all.deb ... 312s Unpacking r-cran-munsell (0.5.0-2build1) ... 312s Selecting previously unselected package r-cran-r6. 312s Preparing to unpack .../158-r-cran-r6_2.5.1-1_all.deb ... 312s Unpacking r-cran-r6 (2.5.1-1) ... 312s Selecting previously unselected package r-cran-rcolorbrewer. 312s Preparing to unpack .../159-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 312s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 312s Selecting previously unselected package r-cran-viridislite. 312s Preparing to unpack .../160-r-cran-viridislite_0.4.2-2_all.deb ... 312s Unpacking r-cran-viridislite (0.4.2-2) ... 312s Selecting previously unselected package r-cran-scales. 312s Preparing to unpack .../161-r-cran-scales_1.3.0-1_all.deb ... 312s Unpacking r-cran-scales (1.3.0-1) ... 312s Selecting previously unselected package r-cran-fansi. 312s Preparing to unpack .../162-r-cran-fansi_1.0.5-1_ppc64el.deb ... 312s Unpacking r-cran-fansi (1.0.5-1) ... 312s Selecting previously unselected package r-cran-magrittr. 312s Preparing to unpack .../163-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 312s Unpacking r-cran-magrittr (2.0.3-1) ... 312s Selecting previously unselected package r-cran-utf8. 312s Preparing to unpack .../164-r-cran-utf8_1.2.4-1_ppc64el.deb ... 312s Unpacking r-cran-utf8 (1.2.4-1) ... 312s Selecting previously unselected package r-cran-vctrs. 312s Preparing to unpack .../165-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 312s Unpacking r-cran-vctrs (0.6.5-1) ... 312s Selecting previously unselected package r-cran-pillar. 312s Preparing to unpack .../166-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 312s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 312s Selecting previously unselected package r-cran-pkgconfig. 312s Preparing to unpack .../167-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 312s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 312s Selecting previously unselected package r-cran-tibble. 312s Preparing to unpack .../168-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 312s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 312s Selecting previously unselected package r-cran-withr. 312s Preparing to unpack .../169-r-cran-withr_2.5.0-1_all.deb ... 312s Unpacking r-cran-withr (2.5.0-1) ... 312s Selecting previously unselected package r-cran-ggplot2. 312s Preparing to unpack .../170-r-cran-ggplot2_3.4.4+dfsg-1_all.deb ... 312s Unpacking r-cran-ggplot2 (3.4.4+dfsg-1) ... 312s Selecting previously unselected package mafft. 312s Preparing to unpack .../171-mafft_7.505-1_ppc64el.deb ... 312s Unpacking mafft (7.505-1) ... 312s Selecting previously unselected package fasttree. 312s Preparing to unpack .../172-fasttree_2.1.11-2_ppc64el.deb ... 312s Unpacking fasttree (2.1.11-2) ... 312s Selecting previously unselected package roary. 312s Preparing to unpack .../173-roary_3.13.0+dfsg-1_all.deb ... 312s Unpacking roary (3.13.0+dfsg-1) ... 312s Setting up libarray-utils-perl (0.5-3) ... 312s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 312s Setting up ncbi-data (6.1.20170106+dfsg1-10) ... 312s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 312s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 312s Setting up libpaper1:ppc64el (1.1.29) ... 313s 313s Creating config file /etc/papersize with new version 313s Setting up libfile-slurper-perl (0.014-1) ... 313s Setting up libfile-which-perl (1.27-2) ... 313s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 313s Setting up libparse-yapp-perl (1.21-3) ... 313s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 313s Setting up libdynaloader-functions-perl (0.003-3) ... 313s Setting up libdatrie1:ppc64el (0.2.13-3) ... 313s Setting up libtext-glob-perl (0.11-3) ... 313s Setting up libtest-deep-perl (1.204-1) ... 313s Setting up libxcb-render0:ppc64el (1.15-1) ... 313s Setting up mafft (7.505-1) ... 313s Setting up libclone-perl:ppc64el (0.46-1build1) ... 313s Setting up libalgorithm-diff-perl (1.201-1) ... 313s Setting up libhtml-tagset-perl (3.20-6) ... 313s Setting up libtest-file-perl (1.993-1) ... 313s Setting up unzip (6.0-28ubuntu3) ... 313s Setting up libheap-perl (0.80-5) ... 313s Setting up liblwp-mediatypes-perl (6.04-2) ... 313s Setting up x11-common (1:7.7+23ubuntu2) ... 313s Setting up libtry-tiny-perl (0.31-2) ... 313s Setting up libdeflate0:ppc64el (1.19-1) ... 313s Setting up perl-openssl-defaults:ppc64el (7) ... 313s Setting up libencode-locale-perl (1.05-3) ... 313s Setting up libxcb-shm0:ppc64el (1.15-1) ... 313s Setting up libfindbin-libs-perl (3.0.2-1) ... 313s Setting up libpaper-utils (1.1.29) ... 313s Setting up libgomp1:ppc64el (14-20240303-1ubuntu1) ... 313s Setting up libjbig0:ppc64el (2.1-6.1ubuntu1) ... 313s Setting up libsub-install-perl (0.929-1) ... 313s Setting up libnumber-compare-perl (0.03-3) ... 313s Setting up libio-string-perl (1.08-4) ... 313s Setting up zip (3.0-13) ... 313s Setting up libpackage-stash-xs-perl:ppc64el (0.30-1build2) ... 313s Setting up libblas3:ppc64el (3.12.0-3) ... 313s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 313s Setting up libclass-data-inheritable-perl (0.08-3) ... 313s Setting up libalgorithm-c3-perl (0.11-2) ... 313s Setting up libset-object-perl (1.42-1build3) ... 313s Setting up liblog-log4perl-perl (1.57-1) ... 313s Setting up libmbedcrypto7:ppc64el (2.28.7-1ubuntu1) ... 313s Setting up libtext-diff-perl (1.45-2) ... 313s Setting up libfile-find-rule-perl (0.34-3) ... 313s Setting up libperlio-utf8-strict-perl (0.010-1build1) ... 313s Setting up libxml-writer-perl (0.900-2) ... 313s Setting up libenv-path-perl (0.19-4) ... 313s Setting up fonts-dejavu-mono (2.37-8) ... 313s Setting up libio-html-perl (1.004-3) ... 313s Setting up libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 313s Setting up libb-hooks-op-check-perl:ppc64el (0.22-2build2) ... 313s Setting up libfile-grep-perl (0.02-3) ... 313s Setting up fonts-dejavu-core (2.37-8) ... 313s Setting up libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 313s Setting up libparams-util-perl (1.102-2build1) ... 313s Setting up parallel (20231122+ds-1) ... 313s Setting up libspiffy-perl (0.46-1) ... 313s Setting up libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 313s Setting up libsub-exporter-progressive-perl (0.001013-3) ... 313s Setting up libwebp7:ppc64el (1.3.2-0.4) ... 313s Setting up libcapture-tiny-perl (0.48-2) ... 313s Setting up libtimedate-perl (2.3300-2) ... 313s Setting up libdata-stag-perl (0.14-3) ... 313s Setting up libtingea0:ppc64el (21-361-2) ... 313s Setting up libsub-uplevel-perl (0.2800-3) ... 313s Setting up libharfbuzz0b:ppc64el (8.3.0-2) ... 313s Setting up libthai-data (0.1.29-2) ... 313s Setting up libdevel-globaldestruction-perl (0.14-4) ... 313s Setting up fasttree (2.1.11-2) ... 313s Setting up libdevel-stacktrace-perl (2.0500-1) ... 313s Setting up libbio-perl-perl (1.7.8-1) ... 313s Setting up libxss1:ppc64el (1:1.2.3-1build2) ... 313s Setting up xdg-utils (1.1.3-4.1ubuntu3) ... 313s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 313s Setting up bedtools (2.31.1+dfsg-2) ... 313s Setting up liburi-perl (5.27-1) ... 313s Setting up prank (0.0.170427+dfsg-3) ... 313s Setting up libtext-csv-perl (2.04-1) ... 313s Setting up libnet-ssleay-perl:ppc64el (1.94-1) ... 313s Setting up cd-hit (4.8.1-4) ... 313s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 313s Setting up libice6:ppc64el (2:1.0.10-1build2) ... 313s Setting up libhttp-date-perl (6.06-1) ... 313s Setting up liblapack3:ppc64el (3.12.0-3) ... 313s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 313s Setting up libfile-listing-perl (6.16-1) ... 313s Setting up libmbedx509-1:ppc64el (2.28.7-1ubuntu1) ... 313s Setting up libmbedtls14:ppc64el (2.28.7-1ubuntu1) ... 313s Setting up fontconfig-config (2.15.0-1ubuntu1) ... 313s Setting up libtest-warn-perl (0.37-2) ... 313s Setting up libtest-differences-perl (0.71-1) ... 313s Setting up libnet-http-perl (6.23-1) ... 313s Setting up libexception-class-perl (1.45-1) ... 313s Setting up libio-all-perl (0.87-2) ... 313s Setting up libclass-c3-perl (0.35-2) ... 313s Setting up libgraph-perl (1:0.9727-1) ... 313s Setting up libdevel-callchecker-perl:ppc64el (0.008-2build1) ... 313s Setting up libtest-files-perl (0.15-1) ... 313s Setting up ncbi-blast+ (2.12.0+ds-4) ... 313s Setting up libthai0:ppc64el (0.1.29-2) ... 313s Setting up libtest-exception-perl (0.43-3) ... 313s Setting up mcl (1:22-282+ds-2) ... 313s Setting up libdata-optlist-perl (0.114-1) ... 313s Setting up libtest-output-perl (1.034-1) ... 313s Setting up libwww-robotrules-perl (6.02-1) ... 313s Setting up libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 313s Setting up libhtml-parser-perl:ppc64el (3.81-1build1) ... 313s Setting up libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 313s Setting up libmro-compat-perl (0.15-2) ... 313s Setting up libsm6:ppc64el (2:1.2.3-1build2) ... 313s Setting up libio-socket-ssl-perl (2.085-1) ... 313s Setting up libsub-exporter-perl (0.990-1) ... 313s Setting up libhttp-message-perl (6.45-1ubuntu1) ... 313s Setting up libeval-closure-perl (0.14-3) ... 313s Setting up libhttp-negotiate-perl (6.01-2) ... 313s Setting up fontconfig (2.15.0-1ubuntu1) ... 315s Regenerating fonts cache... done. 315s Setting up libxft2:ppc64el (2.3.6-1) ... 315s Setting up libhttp-cookies-perl (6.11-1) ... 315s Setting up libtest-most-perl (0.38-1) ... 315s Setting up libhtml-tree-perl (5.07-3) ... 315s Setting up libtk8.6:ppc64el (8.6.13-2) ... 315s Setting up libparams-classify-perl:ppc64el (0.015-2build3) ... 315s Setting up libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 315s Setting up libcairo2:ppc64el (1.18.0-1) ... 315s Setting up libmodule-runtime-perl (0.016-2) ... 315s Setting up libdist-checkconflicts-perl (0.11-2) ... 315s Setting up libxt6:ppc64el (1:1.2.1-1.1) ... 315s Setting up libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 315s Setting up libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 315s Setting up bioperl (1.7.8-1) ... 315s Setting up libmodule-implementation-perl (0.09-2) ... 315s Setting up libpackage-stash-perl (0.40-1) ... 315s Setting up libmodule-runtime-conflicts-perl (0.003-2) ... 315s Setting up libclass-load-perl (0.25-2) ... 315s Setting up r-base-core (4.3.2-1build1) ... 316s 316s Creating config file /etc/R/Renviron with new version 316s Setting up r-cran-labeling (0.4.3-1) ... 316s Setting up r-cran-lattice (0.22-5-1) ... 316s Setting up r-cran-nlme (3.1.164-1) ... 316s Setting up r-cran-farver (2.1.1-1) ... 316s Setting up libpackage-deprecationmanager-perl (0.18-1) ... 316s Setting up r-cran-viridislite (0.4.2-2) ... 316s Setting up libdevel-overloadinfo-perl (0.007-1) ... 316s Setting up libclass-load-xs-perl (0.10-2build2) ... 316s Setting up r-cran-r6 (2.5.1-1) ... 316s Setting up r-cran-magrittr (2.0.3-1) ... 316s Setting up r-cran-rlang (1.1.3-1) ... 316s Setting up r-cran-withr (2.5.0-1) ... 316s Setting up libmoose-perl:ppc64el (2.2207-1) ... 316s Setting up r-cran-fansi (1.0.5-1) ... 316s Setting up r-cran-mass (7.3-60.0.1-1) ... 316s Setting up r-cran-glue (1.7.0-1) ... 316s Setting up r-cran-cli (3.6.2-1) ... 316s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 316s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 316s Setting up r-cran-utf8 (1.2.4-1) ... 316s Setting up r-cran-colorspace (2.1-0+dfsg-1) ... 316s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 316s Setting up r-cran-isoband (0.2.7-1) ... 316s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 316s Setting up r-cran-matrix (1.6-5-1) ... 316s Setting up r-cran-mgcv (1.9-1-1) ... 316s Setting up r-cran-vctrs (0.6.5-1) ... 316s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 316s Setting up r-cran-munsell (0.5.0-2build1) ... 316s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 316s Setting up r-cran-scales (1.3.0-1) ... 316s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 316s Setting up liblwp-protocol-https-perl (6.13-1) ... 316s Setting up libwww-perl (6.76-1) ... 316s Setting up libdigest-md5-file-perl (0.08-1.1) ... 316s Setting up libxml-parser-perl (2.47-1build1) ... 316s Setting up libgraph-readwrite-perl (2.10-1) ... 316s Setting up roary (3.13.0+dfsg-1) ... 316s Setting up autopkgtest-satdep (0) ... 316s Processing triggers for libc-bin (2.39-0ubuntu2) ... 316s Processing triggers for man-db (2.12.0-3) ... 317s Processing triggers for install-info (7.1-3) ... 325s (Reading database ... 78756 files and directories currently installed.) 325s Removing autopkgtest-satdep (0) ... 326s autopkgtest [12:10:52]: test test-installed: [----------------------- 327s 327s Please cite Roary if you use any of the results it produces: 327s Andrew J. Page, Carla A. Cummins, Martin Hunt, Vanessa K. Wong, Sandra Reuter, Matthew T. G. Holden, Maria Fookes, Daniel Falush, Jacqueline A. Keane, Julian Parkhill, 327s "Roary: Rapid large-scale prokaryote pan genome analysis", Bioinformatics, 2015 Nov 15;31(22):3691-3693 327s doi: http://doi.org/10.1093/bioinformatics/btv421 327s Pubmed: 26198102 327s 329s autopkgtest [12:10:55]: test test-installed: -----------------------] 330s test-installed PASS 330s autopkgtest [12:10:56]: test test-installed: - - - - - - - - - - results - - - - - - - - - - 330s autopkgtest [12:10:56]: @@@@@@@@@@@@@@@@@@@@ summary 330s test-installed PASS 345s Creating nova instance adt-noble-ppc64el-roary-20240313-120526-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240312.img (UUID 2068c266-b1f4-4468-a3e5-e52b1c42dc85)...