0s autopkgtest [21:53:52]: starting date and time: 2024-04-08 21:53:52+0000 0s autopkgtest [21:53:52]: git checkout: 43bc6cdf gitlab-ci: do not include the salsa pipeline 0s autopkgtest [21:53:52]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4gm1n_07/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:curl --apt-upgrade r-bioc-variantannotation --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=curl/8.5.0-2ubuntu10 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-7.secgroup --name adt-noble-ppc64el-r-bioc-variantannotation-20240408-215352-juju-7f2275-prod-proposed-migration-environment-2-eeda7d0e-95bf-469a-a8ca-4399e0030470 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 125s autopkgtest [21:55:57]: testbed dpkg architecture: ppc64el 125s autopkgtest [21:55:57]: testbed apt version: 2.7.14build2 125s autopkgtest [21:55:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 126s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 126s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [4680 B] 127s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [10.6 kB] 127s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [831 kB] 127s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [358 kB] 127s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [347 kB] 127s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 127s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1192 B] 127s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 127s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [1001 kB] 127s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 127s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [9108 B] 127s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 131s Fetched 2691 kB in 2s (1455 kB/s) 131s Reading package lists... 134s Reading package lists... 134s Building dependency tree... 134s Reading state information... 134s Calculating upgrade... 135s The following packages will be upgraded: 135s bash curl grub-common grub-ieee1275 grub-ieee1275-bin grub2-common 135s libcurl3t64-gnutls libcurl4t64 libpython3.12-minimal libpython3.12-stdlib 135s libsasl2-2 libsasl2-modules libsasl2-modules-db python3-gi python3.12 135s python3.12-minimal 135s 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 135s Need to get 12.4 MB of archives. 135s After this operation, 570 kB disk space will be freed. 135s Get:1 http://ftpmaster.internal/ubuntu noble/main ppc64el bash ppc64el 5.2.21-2ubuntu4 [977 kB] 135s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el python3.12 ppc64el 3.12.2-5ubuntu3 [644 kB] 136s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libpython3.12-stdlib ppc64el 3.12.2-5ubuntu3 [2123 kB] 136s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el python3.12-minimal ppc64el 3.12.2-5ubuntu3 [2495 kB] 136s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libpython3.12-minimal ppc64el 3.12.2-5ubuntu3 [834 kB] 137s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el python3-gi ppc64el 3.48.2-1 [262 kB] 137s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu10 [235 kB] 137s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu10 [428 kB] 137s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-ieee1275 ppc64el 2.12-1ubuntu7 [63.1 kB] 137s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el grub2-common ppc64el 2.12-1ubuntu7 [752 kB] 137s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-ieee1275-bin ppc64el 2.12-1ubuntu7 [687 kB] 137s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el grub-common ppc64el 2.12-1ubuntu7 [2356 kB] 137s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl3t64-gnutls ppc64el 8.5.0-2ubuntu10 [419 kB] 137s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-modules-db ppc64el 2.1.28+dfsg1-5ubuntu3 [23.5 kB] 137s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-2 ppc64el 2.1.28+dfsg1-5ubuntu3 [68.0 kB] 137s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libsasl2-modules ppc64el 2.1.28+dfsg1-5ubuntu3 [83.2 kB] 138s Preconfiguring packages ... 138s Fetched 12.4 MB in 3s (4711 kB/s) 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 103388 files and directories currently installed.) 138s Preparing to unpack .../bash_5.2.21-2ubuntu4_ppc64el.deb ... 138s Unpacking bash (5.2.21-2ubuntu4) over (5.2.21-2ubuntu2) ... 138s Setting up bash (5.2.21-2ubuntu4) ... 138s update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 103388 files and directories currently installed.) 138s Preparing to unpack .../00-python3.12_3.12.2-5ubuntu3_ppc64el.deb ... 138s Unpacking python3.12 (3.12.2-5ubuntu3) over (3.12.2-4build4) ... 138s Preparing to unpack .../01-libpython3.12-stdlib_3.12.2-5ubuntu3_ppc64el.deb ... 139s Unpacking libpython3.12-stdlib:ppc64el (3.12.2-5ubuntu3) over (3.12.2-4build4) ... 139s Preparing to unpack .../02-python3.12-minimal_3.12.2-5ubuntu3_ppc64el.deb ... 139s Unpacking python3.12-minimal (3.12.2-5ubuntu3) over (3.12.2-4build4) ... 139s Preparing to unpack .../03-libpython3.12-minimal_3.12.2-5ubuntu3_ppc64el.deb ... 139s Unpacking libpython3.12-minimal:ppc64el (3.12.2-5ubuntu3) over (3.12.2-4build4) ... 139s Preparing to unpack .../04-python3-gi_3.48.2-1_ppc64el.deb ... 140s Unpacking python3-gi (3.48.2-1) over (3.48.1-1build1) ... 140s Preparing to unpack .../05-curl_8.5.0-2ubuntu10_ppc64el.deb ... 140s Unpacking curl (8.5.0-2ubuntu10) over (8.5.0-2ubuntu9) ... 140s Preparing to unpack .../06-libcurl4t64_8.5.0-2ubuntu10_ppc64el.deb ... 140s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu10) over (8.5.0-2ubuntu9) ... 140s Preparing to unpack .../07-grub-ieee1275_2.12-1ubuntu7_ppc64el.deb ... 140s Unpacking grub-ieee1275 (2.12-1ubuntu7) over (2.12-1ubuntu6) ... 140s Preparing to unpack .../08-grub2-common_2.12-1ubuntu7_ppc64el.deb ... 140s Unpacking grub2-common (2.12-1ubuntu7) over (2.12-1ubuntu6) ... 140s Preparing to unpack .../09-grub-ieee1275-bin_2.12-1ubuntu7_ppc64el.deb ... 140s Unpacking grub-ieee1275-bin (2.12-1ubuntu7) over (2.12-1ubuntu6) ... 140s Preparing to unpack .../10-grub-common_2.12-1ubuntu7_ppc64el.deb ... 140s Unpacking grub-common (2.12-1ubuntu7) over (2.12-1ubuntu6) ... 140s Preparing to unpack .../11-libcurl3t64-gnutls_8.5.0-2ubuntu10_ppc64el.deb ... 140s Unpacking libcurl3t64-gnutls:ppc64el (8.5.0-2ubuntu10) over (8.5.0-2ubuntu9) ... 140s Preparing to unpack .../12-libsasl2-modules-db_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ... 140s Unpacking libsasl2-modules-db:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ... 140s Preparing to unpack .../13-libsasl2-2_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ... 140s Unpacking libsasl2-2:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ... 140s Preparing to unpack .../14-libsasl2-modules_2.1.28+dfsg1-5ubuntu3_ppc64el.deb ... 140s Unpacking libsasl2-modules:ppc64el (2.1.28+dfsg1-5ubuntu3) over (2.1.28+dfsg1-5ubuntu2) ... 141s Setting up libcurl4t64:ppc64el (8.5.0-2ubuntu10) ... 141s Setting up libsasl2-modules:ppc64el (2.1.28+dfsg1-5ubuntu3) ... 141s Setting up libpython3.12-minimal:ppc64el (3.12.2-5ubuntu3) ... 141s Setting up libcurl3t64-gnutls:ppc64el (8.5.0-2ubuntu10) ... 141s Setting up libsasl2-modules-db:ppc64el (2.1.28+dfsg1-5ubuntu3) ... 141s Setting up grub-common (2.12-1ubuntu7) ... 142s Setting up python3-gi (3.48.2-1) ... 142s Setting up libsasl2-2:ppc64el (2.1.28+dfsg1-5ubuntu3) ... 142s Setting up curl (8.5.0-2ubuntu10) ... 142s Setting up python3.12-minimal (3.12.2-5ubuntu3) ... 143s Setting up libpython3.12-stdlib:ppc64el (3.12.2-5ubuntu3) ... 143s Setting up grub2-common (2.12-1ubuntu7) ... 143s Setting up python3.12 (3.12.2-5ubuntu3) ... 145s Setting up grub-ieee1275-bin (2.12-1ubuntu7) ... 145s Setting up grub-ieee1275 (2.12-1ubuntu7) ... 145s Installing for powerpc-ieee1275 platform. 145s Installation finished. No error reported. 146s Sourcing file `/etc/default/grub' 146s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 146s Generating grub configuration file ... 146s Found linux image: /boot/vmlinux-6.8.0-22-generic 146s Found initrd image: /boot/initrd.img-6.8.0-22-generic 146s Found linux image: /boot/vmlinux-6.8.0-11-generic 146s Found initrd image: /boot/initrd.img-6.8.0-11-generic 146s Warning: os-prober will not be executed to detect other bootable partitions. 146s Systems on them will not be added to the GRUB boot configuration. 146s Check GRUB_DISABLE_OS_PROBER documentation entry. 146s Adding boot menu entry for UEFI Firmware Settings ... 146s done 146s Processing triggers for systemd (255.4-1ubuntu7) ... 147s Processing triggers for man-db (2.12.0-4build1) ... 148s Processing triggers for debianutils (5.17build1) ... 149s Processing triggers for install-info (7.1-3build2) ... 149s Processing triggers for libc-bin (2.39-0ubuntu8) ... 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 150s The following packages will be REMOVED: 150s linux-headers-6.8.0-11* linux-headers-6.8.0-11-generic* 150s linux-image-6.8.0-11-generic* linux-modules-6.8.0-11-generic* 150s 0 upgraded, 0 newly installed, 4 to remove and 0 not upgraded. 150s After this operation, 207 MB disk space will be freed. 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 103389 files and directories currently installed.) 150s Removing linux-headers-6.8.0-11-generic (6.8.0-11.11) ... 151s Removing linux-headers-6.8.0-11 (6.8.0-11.11) ... 153s Removing linux-image-6.8.0-11-generic (6.8.0-11.11) ... 153s I: /boot/vmlinux.old is now a symlink to vmlinux-6.8.0-22-generic 153s I: /boot/initrd.img.old is now a symlink to initrd.img-6.8.0-22-generic 153s /etc/kernel/postrm.d/initramfs-tools: 153s update-initramfs: Deleting /boot/initrd.img-6.8.0-11-generic 153s /etc/kernel/postrm.d/zz-update-grub: 153s Sourcing file `/etc/default/grub' 153s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 153s Generating grub configuration file ... 153s Found linux image: /boot/vmlinux-6.8.0-22-generic 154s Found initrd image: /boot/initrd.img-6.8.0-22-generic 154s Warning: os-prober will not be executed to detect other bootable partitions. 154s Systems on them will not be added to the GRUB boot configuration. 154s Check GRUB_DISABLE_OS_PROBER documentation entry. 154s Adding boot menu entry for UEFI Firmware Settings ... 154s done 154s Removing linux-modules-6.8.0-11-generic (6.8.0-11.11) ... 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72693 files and directories currently installed.) 154s Purging configuration files for linux-image-6.8.0-11-generic (6.8.0-11.11) ... 154s Purging configuration files for linux-modules-6.8.0-11-generic (6.8.0-11.11) ... 155s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 155s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 155s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 155s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 157s Reading package lists... 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 158s Calculating upgrade... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s autopkgtest [21:56:31]: rebooting testbed after setup commands that affected boot 202s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 216s autopkgtest [21:57:28]: testbed running kernel: Linux 6.8.0-22-generic #22-Ubuntu SMP Thu Apr 4 22:47:57 UTC 2024 219s autopkgtest [21:57:31]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-variantannotation 221s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1build1 (dsc) [2706 B] 221s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1build1 (tar) [1887 kB] 221s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1build1 (diff) [8024 B] 221s gpgv: Signature made Sat Mar 16 06:57:56 2024 UTC 221s gpgv: using RSA key AC483F68DE728F43F2202FCA568D30F321B2133D 221s gpgv: issuer "steve.langasek@ubuntu.com" 221s gpgv: Can't check signature: No public key 221s dpkg-source: warning: cannot verify inline signature for ./r-bioc-variantannotation_1.48.1-1build1.dsc: no acceptable signature found 222s autopkgtest [21:57:34]: testing package r-bioc-variantannotation version 1.48.1-1build1 223s autopkgtest [21:57:35]: build not needed 230s autopkgtest [21:57:42]: test pkg-r-autopkgtest: preparing testbed 232s Reading package lists... 232s Building dependency tree... 232s Reading state information... 233s Starting pkgProblemResolver with broken count: 0 233s Starting 2 pkgProblemResolver with broken count: 0 233s Done 233s The following additional packages will be installed: 233s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 233s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fonts-font-awesome 233s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 233s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 233s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 233s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 233s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 233s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libcairo2 233s libcc1-0 libdatrie1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 233s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 233s libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap 233s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 233s libjs-jquery-datatables libjs-jquery-datatables-extensions 233s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 233s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 233s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 233s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblsan0 233s liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 233s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 233s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 233s libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsm6 libstdc++-13-dev 233s libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 233s libtk8.6 libtsan2 libubsan1 libxaw7 libxcb-render0 libxcb-shm0 libxft2 233s libxi6 libxmu6 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 233s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 233s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 233s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 233s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 233s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 233s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 233s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 233s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 233s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 233s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 233s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 233s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 233s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 233s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 233s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 233s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 233s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 233s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 233s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 233s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 233s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 233s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 233s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 233s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 233s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 233s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 233s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 233s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 233s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 233s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 233s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 233s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 233s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 233s r-cran-xml2 r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 233s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 233s xdg-utils zip zlib1g-dev 233s Suggested packages: 233s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 233s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 233s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 233s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 233s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 233s libboost-context1.83-dev libboost-contract1.83-dev 233s libboost-coroutine1.83-dev libboost-date-time1.83-dev 233s libboost-exception1.83-dev libboost-fiber1.83-dev 233s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 233s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 233s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 233s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 233s libboost-numpy1.83-dev libboost-program-options1.83-dev 233s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 233s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 233s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 233s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 233s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 233s icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 233s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 233s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 233s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 233s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 233s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 233s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 233s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-ensembldb 233s r-bioc-experimenthub r-bioc-all r-cran-testthat r-bioc-affy r-bioc-deseq2 233s r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 233s r-bioc-shortread r-cran-batchtools r-cran-data.table r-cran-mockery 233s r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 233s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-edger 233s r-bioc-annotationfilter r-cran-markdown r-bioc-gviz r-bioc-dexseq 233s r-bioc-sparsematrixstats r-bioc-limma r-cran-hexbin r-bioc-rhdf5 233s r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-kernsmooth r-cran-kernlab 233s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg r-cran-viridis 233s r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-magick r-cran-sf 233s r-cran-getopt r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 233s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 233s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-here 233s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper ghostscript 233s gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 233s texlive-latex-base-doc wp2latex 233s Recommended packages: 233s bzip2-doc node-jquery libpng-tools r-recommended r-doc-html r-cran-testthat 233s r-cran-remotes r-cran-downlit r-cran-rstudioapi r-cran-miniui 233s r-cran-rsconnect r-cran-testit r-cran-tufte r-cran-webshot r-cran-thematic 233s r-cran-callr r-cran-covr r-cran-mockery r-cran-processx r-cran-ps 233s r-cran-rprojroot r-cran-whoami r-cran-bench r-cran-brio r-cran-decor 233s r-cran-desc r-cran-lobstr r-cran-spelling r-cran-webutils r-cran-rpostgresql 233s r-cran-broom r-cran-rmysql r-cran-future w3m | www-browser r-cran-unitizer 233s r-cran-rsvg r-cran-pkgload r-cran-hexbin r-cran-hmisc r-cran-mapproj 233s r-cran-maps r-cran-multcomp r-cran-profvis r-cran-quantreg r-cran-ragg 233s r-cran-rpart r-cran-sf r-cran-svglite r-cran-vdiffr r-cran-waldo 233s r-cran-cairo r-cran-markdown r-cran-jpeg r-cran-readr r-cran-r.rsp 233s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 233s node-highlight.js r-cran-lintr r-cran-tidyverse r-cran-r.devices 233s r-cran-sodium r-cran-lubridate r-cran-usethis r-cran-dygraphs r-cran-dbitest 233s r-cran-gert r-cran-gh r-cran-rvest r-cran-dichromat r-cran-data.table 233s r-cran-mockr r-cran-formattable r-cran-pkgdown r-cran-zeallot r-cran-renv 233s lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 233s x11-utils x11-xserver-utils 233s The following NEW packages will be installed: 233s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 233s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fonts-font-awesome 233s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 233s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 233s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 233s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 233s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 233s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libcairo2 233s libcc1-0 libdatrie1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 233s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 233s libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjs-bootstrap 233s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 233s libjs-jquery-datatables libjs-jquery-datatables-extensions 233s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 233s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 233s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 233s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblsan0 233s liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 233s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 233s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 233s libpotrace0 libptexenc1 libquadmath0 libreadline-dev libsm6 libstdc++-13-dev 233s libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 233s libtk8.6 libtsan2 libubsan1 libxaw7 libxcb-render0 libxcb-shm0 libxft2 233s libxi6 libxmu6 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 233s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 233s pkg-config pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 233s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 233s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 233s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 233s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 233s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 233s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 233s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 233s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 233s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 233s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 233s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 233s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 233s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 233s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 233s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 233s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 233s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 233s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 233s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 233s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 233s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 233s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 233s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 233s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 233s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 233s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 233s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 233s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 233s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 233s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 233s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 233s r-cran-xml2 r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 233s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 233s xdg-utils zip zlib1g-dev 233s 0 upgraded, 279 newly installed, 0 to remove and 0 not upgraded. 233s Need to get 453 MB/453 MB of archives. 233s After this operation, 1430 MB of additional disk space will be used. 233s Get:1 /tmp/autopkgtest.rRurJd/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [776 B] 234s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 234s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 234s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [10.7 MB] 235s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-23ubuntu3 [1036 B] 235s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 235s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 235s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240330-1ubuntu2 [48.4 kB] 235s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240330-1ubuntu2 [161 kB] 235s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240330-1ubuntu2 [32.3 kB] 235s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240330-1ubuntu2 [10.7 kB] 235s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240330-1ubuntu2 [2973 kB] 236s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240330-1ubuntu2 [1325 kB] 236s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240330-1ubuntu2 [2700 kB] 236s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240330-1ubuntu2 [1194 kB] 236s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240330-1ubuntu2 [158 kB] 236s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-23ubuntu3 [1579 kB] 236s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [20.6 MB] 237s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-23ubuntu3 [479 kB] 237s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 237s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 237s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-23ubuntu3 [2510 kB] 237s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [12.2 MB] 237s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-23ubuntu3 [14.5 kB] 237s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 237s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 237s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 237s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 237s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1.1ubuntu2 [192 kB] 237s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 237s Get:31 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 237s Get:32 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 237s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 237s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240330-1ubuntu2 [575 kB] 237s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-23ubuntu3 [604 kB] 237s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-23ubuntu3 [11.2 MB] 238s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-23ubuntu3 [10.9 kB] 238s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 238s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 238s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 238s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 238s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 238s Get:43 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 238s Get:44 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 238s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 238s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 238s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2.1ubuntu3 [10.7 MB] 238s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 238s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 238s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 238s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 238s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 238s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 238s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-3 [751 kB] 238s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 238s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 238s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2build2 [580 kB] 238s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 238s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 238s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 238s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 238s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 238s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 238s Get:64 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 238s Get:65 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 238s Get:66 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 238s Get:67 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 239s Get:68 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 239s Get:69 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 239s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 239s Get:71 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 239s Get:72 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 239s Get:73 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 239s Get:74 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 239s Get:75 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 239s Get:76 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 239s Get:77 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 239s Get:78 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 239s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 239s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9build3 [71.3 kB] 239s Get:81 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 239s Get:82 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 239s Get:83 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 239s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 239s Get:85 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 239s Get:86 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.52.1+ds-1build1 [271 kB] 239s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.52.1+ds-1build1 [50.5 kB] 239s Get:88 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.52.1+ds-1build1 [31.1 kB] 239s Get:89 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 239s Get:90 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 239s Get:91 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 239s Get:92 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 239s Get:93 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 239s Get:94 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 239s Get:95 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 239s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3.1ubuntu2 [902 kB] 239s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-5build1 [328 kB] 239s Get:98 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 239s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9build3 [42.9 kB] 239s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-4build1 [230 kB] 239s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 239s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9build3 [68.9 kB] 239s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.14+dfsg-1build1 [1204 kB] 240s Get:104 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 240s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9build3 [163 kB] 240s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 240s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 240s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.14-1build1 [944 kB] 240s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6t64 ppc64el 1:1.2.1-1.2build1 [202 kB] 240s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3build2 [56.8 kB] 240s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1build2 [231 kB] 240s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 240s Get:113 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13t64 ppc64el 0.13.72+dfsg.1-1.2build1 [32.2 kB] 240s Get:114 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 240s Get:115 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 240s Get:116 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 240s Get:117 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 240s Get:118 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 241s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 241s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 241s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 241s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 241s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 241s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 241s Get:125 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.3-2build2 [27.4 MB] 242s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.6.1+really5.4.5-1 [207 kB] 242s Get:127 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.3-2build2 [4334 B] 242s Get:128 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 242s Get:129 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 242s Get:130 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 242s Get:131 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 242s Get:132 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 242s Get:133 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 242s Get:134 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 242s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 242s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 242s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 242s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 242s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 242s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 243s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 243s Get:142 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 243s Get:143 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 243s Get:144 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 243s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 243s Get:146 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 243s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 243s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 243s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1build2 [179 kB] 243s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 243s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 243s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 243s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 243s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2build2 [406 kB] 243s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 243s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 243s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1build2 [44.3 kB] 243s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 243s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 243s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 243s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1build2 [797 kB] 243s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 243s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 244s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 244s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 244s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 244s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 244s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 244s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 244s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 244s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 244s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 244s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 244s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 244s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 244s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 244s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 244s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 244s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 244s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 245s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 245s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 245s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 245s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 245s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocversion all 3.18.1-1 [11.0 kB] 245s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 245s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 245s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 245s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 245s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 245s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 245s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 245s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1build2 [529 kB] 245s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 245s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 245s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 245s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 245s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 245s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 245s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 245s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 245s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 245s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1build2 [232 kB] 245s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 246s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 246s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 246s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 246s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 246s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 246s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 246s Get:211 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 247s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 247s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 247s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 247s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 247s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 247s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB] 247s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 247s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dt all 0.31+dfsg-1 [265 kB] 247s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 247s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 247s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 247s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 247s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 247s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 247s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 247s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 247s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 247s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 247s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 247s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 247s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 247s Get:233 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 247s Get:234 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9build3 [12.4 MB] 248s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 250s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 250s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 254s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 254s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 255s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 255s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 255s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 255s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 255s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 255s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 255s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-3build2 [1552 kB] 255s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1build1 [3815 kB] 255s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 255s Get:249 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 255s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 255s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 255s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 255s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 256s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 256s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 256s Get:256 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 256s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 256s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 256s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 256s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 256s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 257s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.3+dfsg-1 [1823 kB] 257s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 257s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-snpstats ppc64el 1.52.0+dfsg-1 [7274 kB] 258s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-variantannotation ppc64el 1.48.1-1build1 [3656 kB] 258s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 258s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 258s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 258s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 258s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 258s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 258s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 259s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 259s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 259s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 259s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 259s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 259s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 259s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.33-1 [377 kB] 260s Preconfiguring packages ... 260s Fetched 453 MB in 26s (17.7 MB/s) 260s Selecting previously unselected package libisl23:ppc64el. 260s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 72692 files and directories currently installed.) 260s Preparing to unpack .../000-libisl23_0.26-3_ppc64el.deb ... 260s Unpacking libisl23:ppc64el (0.26-3) ... 260s Selecting previously unselected package libmpc3:ppc64el. 260s Preparing to unpack .../001-libmpc3_1.3.1-1_ppc64el.deb ... 260s Unpacking libmpc3:ppc64el (1.3.1-1) ... 260s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 260s Preparing to unpack .../002-cpp-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ... 260s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ... 261s Selecting previously unselected package cpp-13. 261s Preparing to unpack .../003-cpp-13_13.2.0-23ubuntu3_ppc64el.deb ... 261s Unpacking cpp-13 (13.2.0-23ubuntu3) ... 261s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 261s Preparing to unpack .../004-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 261s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 261s Selecting previously unselected package cpp. 261s Preparing to unpack .../005-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 261s Unpacking cpp (4:13.2.0-7ubuntu1) ... 261s Selecting previously unselected package libcc1-0:ppc64el. 261s Preparing to unpack .../006-libcc1-0_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libcc1-0:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libgomp1:ppc64el. 261s Preparing to unpack .../007-libgomp1_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libgomp1:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libitm1:ppc64el. 261s Preparing to unpack .../008-libitm1_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libitm1:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libatomic1:ppc64el. 261s Preparing to unpack .../009-libatomic1_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libatomic1:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libasan8:ppc64el. 261s Preparing to unpack .../010-libasan8_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libasan8:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package liblsan0:ppc64el. 261s Preparing to unpack .../011-liblsan0_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking liblsan0:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libtsan2:ppc64el. 261s Preparing to unpack .../012-libtsan2_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libtsan2:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libubsan1:ppc64el. 261s Preparing to unpack .../013-libubsan1_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libubsan1:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libquadmath0:ppc64el. 261s Preparing to unpack .../014-libquadmath0_14-20240330-1ubuntu2_ppc64el.deb ... 261s Unpacking libquadmath0:ppc64el (14-20240330-1ubuntu2) ... 261s Selecting previously unselected package libgcc-13-dev:ppc64el. 261s Preparing to unpack .../015-libgcc-13-dev_13.2.0-23ubuntu3_ppc64el.deb ... 261s Unpacking libgcc-13-dev:ppc64el (13.2.0-23ubuntu3) ... 261s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 261s Preparing to unpack .../016-gcc-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ... 261s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ... 262s Selecting previously unselected package gcc-13. 262s Preparing to unpack .../017-gcc-13_13.2.0-23ubuntu3_ppc64el.deb ... 262s Unpacking gcc-13 (13.2.0-23ubuntu3) ... 262s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 262s Preparing to unpack .../018-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 262s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 262s Selecting previously unselected package gcc. 262s Preparing to unpack .../019-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 262s Unpacking gcc (4:13.2.0-7ubuntu1) ... 262s Selecting previously unselected package libstdc++-13-dev:ppc64el. 262s Preparing to unpack .../020-libstdc++-13-dev_13.2.0-23ubuntu3_ppc64el.deb ... 262s Unpacking libstdc++-13-dev:ppc64el (13.2.0-23ubuntu3) ... 262s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 262s Preparing to unpack .../021-g++-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ... 262s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ... 263s Selecting previously unselected package g++-13. 263s Preparing to unpack .../022-g++-13_13.2.0-23ubuntu3_ppc64el.deb ... 263s Unpacking g++-13 (13.2.0-23ubuntu3) ... 263s Selecting previously unselected package g++-powerpc64le-linux-gnu. 263s Preparing to unpack .../023-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 263s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 263s Selecting previously unselected package g++. 263s Preparing to unpack .../024-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 263s Unpacking g++ (4:13.2.0-7ubuntu1) ... 263s Selecting previously unselected package build-essential. 263s Preparing to unpack .../025-build-essential_12.10ubuntu1_ppc64el.deb ... 263s Unpacking build-essential (12.10ubuntu1) ... 263s Selecting previously unselected package dctrl-tools. 263s Preparing to unpack .../026-dctrl-tools_2.24-3build2_ppc64el.deb ... 263s Unpacking dctrl-tools (2.24-3build2) ... 263s Selecting previously unselected package fontconfig. 263s Preparing to unpack .../027-fontconfig_2.15.0-1.1ubuntu2_ppc64el.deb ... 263s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 263s Selecting previously unselected package fonts-font-awesome. 263s Preparing to unpack .../028-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 263s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 263s Selecting previously unselected package fonts-glyphicons-halflings. 263s Preparing to unpack .../029-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 263s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 263s Selecting previously unselected package fonts-lmodern. 263s Preparing to unpack .../030-fonts-lmodern_2.005-1_all.deb ... 263s Unpacking fonts-lmodern (2.005-1) ... 263s Selecting previously unselected package fonts-mathjax. 263s Preparing to unpack .../031-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 263s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 263s Selecting previously unselected package libgfortran5:ppc64el. 263s Preparing to unpack .../032-libgfortran5_14-20240330-1ubuntu2_ppc64el.deb ... 263s Unpacking libgfortran5:ppc64el (14-20240330-1ubuntu2) ... 263s Selecting previously unselected package libgfortran-13-dev:ppc64el. 263s Preparing to unpack .../033-libgfortran-13-dev_13.2.0-23ubuntu3_ppc64el.deb ... 263s Unpacking libgfortran-13-dev:ppc64el (13.2.0-23ubuntu3) ... 263s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 263s Preparing to unpack .../034-gfortran-13-powerpc64le-linux-gnu_13.2.0-23ubuntu3_ppc64el.deb ... 263s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-23ubuntu3) ... 264s Selecting previously unselected package gfortran-13. 264s Preparing to unpack .../035-gfortran-13_13.2.0-23ubuntu3_ppc64el.deb ... 264s Unpacking gfortran-13 (13.2.0-23ubuntu3) ... 264s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 264s Preparing to unpack .../036-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 264s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 264s Selecting previously unselected package gfortran. 264s Preparing to unpack .../037-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 264s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 264s Selecting previously unselected package icu-devtools. 264s Preparing to unpack .../038-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 264s Unpacking icu-devtools (74.2-1ubuntu1) ... 264s Selecting previously unselected package javascript-common. 264s Preparing to unpack .../039-javascript-common_11+nmu1_all.deb ... 264s Unpacking javascript-common (11+nmu1) ... 264s Selecting previously unselected package libio-string-perl. 264s Preparing to unpack .../040-libio-string-perl_1.08-4_all.deb ... 264s Unpacking libio-string-perl (1.08-4) ... 264s Selecting previously unselected package liblatex-tounicode-perl. 264s Preparing to unpack .../041-liblatex-tounicode-perl_0.54-2_all.deb ... 264s Unpacking liblatex-tounicode-perl (0.54-2) ... 264s Selecting previously unselected package libbibtex-parser-perl. 264s Preparing to unpack .../042-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 264s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 264s Selecting previously unselected package libblas3:ppc64el. 264s Preparing to unpack .../043-libblas3_3.12.0-3_ppc64el.deb ... 264s Unpacking libblas3:ppc64el (3.12.0-3) ... 264s Selecting previously unselected package libblas-dev:ppc64el. 264s Preparing to unpack .../044-libblas-dev_3.12.0-3_ppc64el.deb ... 264s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 264s Selecting previously unselected package libboost1.83-dev:ppc64el. 264s Preparing to unpack .../045-libboost1.83-dev_1.83.0-2.1ubuntu3_ppc64el.deb ... 264s Unpacking libboost1.83-dev:ppc64el (1.83.0-2.1ubuntu3) ... 268s Selecting previously unselected package libboost-dev:ppc64el. 268s Preparing to unpack .../046-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 268s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 268s Selecting previously unselected package libbz2-dev:ppc64el. 268s Preparing to unpack .../047-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 268s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 268s Selecting previously unselected package libpixman-1-0:ppc64el. 268s Preparing to unpack .../048-libpixman-1-0_0.42.2-1_ppc64el.deb ... 268s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 268s Selecting previously unselected package libxcb-render0:ppc64el. 268s Preparing to unpack .../049-libxcb-render0_1.15-1_ppc64el.deb ... 268s Unpacking libxcb-render0:ppc64el (1.15-1) ... 268s Selecting previously unselected package libxcb-shm0:ppc64el. 268s Preparing to unpack .../050-libxcb-shm0_1.15-1_ppc64el.deb ... 268s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 268s Selecting previously unselected package libxrender1:ppc64el. 268s Preparing to unpack .../051-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 268s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 268s Selecting previously unselected package libcairo2:ppc64el. 268s Preparing to unpack .../052-libcairo2_1.18.0-3_ppc64el.deb ... 268s Unpacking libcairo2:ppc64el (1.18.0-3) ... 268s Selecting previously unselected package libdatrie1:ppc64el. 268s Preparing to unpack .../053-libdatrie1_0.2.13-3_ppc64el.deb ... 268s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 268s Selecting previously unselected package libgraphite2-3:ppc64el. 268s Preparing to unpack .../054-libgraphite2-3_1.3.14-2_ppc64el.deb ... 268s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 268s Selecting previously unselected package libharfbuzz0b:ppc64el. 268s Preparing to unpack .../055-libharfbuzz0b_8.3.0-2build2_ppc64el.deb ... 268s Unpacking libharfbuzz0b:ppc64el (8.3.0-2build2) ... 268s Selecting previously unselected package x11-common. 268s Preparing to unpack .../056-x11-common_1%3a7.7+23ubuntu2_all.deb ... 268s Unpacking x11-common (1:7.7+23ubuntu2) ... 268s Selecting previously unselected package libice6:ppc64el. 268s Preparing to unpack .../057-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 268s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 268s Selecting previously unselected package libicu-dev:ppc64el. 268s Preparing to unpack .../058-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 268s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 268s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 268s Preparing to unpack .../059-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 268s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 268s Selecting previously unselected package libjpeg8-dev:ppc64el. 268s Preparing to unpack .../060-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 268s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 269s Selecting previously unselected package libjpeg-dev:ppc64el. 269s Preparing to unpack .../061-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 269s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 269s Selecting previously unselected package libjs-bootstrap. 269s Preparing to unpack .../062-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 269s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 269s Selecting previously unselected package libjs-popper.js. 269s Preparing to unpack .../063-libjs-popper.js_1.16.1+ds-6_all.deb ... 269s Unpacking libjs-popper.js (1.16.1+ds-6) ... 269s Selecting previously unselected package libjs-bootstrap4. 269s Preparing to unpack .../064-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 269s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 269s Selecting previously unselected package libjs-d3. 269s Preparing to unpack .../065-libjs-d3_3.5.17-4_all.deb ... 269s Unpacking libjs-d3 (3.5.17-4) ... 269s Selecting previously unselected package libjs-es5-shim. 269s Preparing to unpack .../066-libjs-es5-shim_4.6.7-2_all.deb ... 269s Unpacking libjs-es5-shim (4.6.7-2) ... 269s Selecting previously unselected package libjs-highlight.js. 269s Preparing to unpack .../067-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 269s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 269s Selecting previously unselected package libjs-jquery. 269s Preparing to unpack .../068-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 269s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 269s Selecting previously unselected package libjs-jquery-datatables. 269s Preparing to unpack .../069-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 269s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 269s Selecting previously unselected package libjs-jquery-datatables-extensions. 269s Preparing to unpack .../070-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 269s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 269s Selecting previously unselected package libjs-sifter.js. 269s Preparing to unpack .../071-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 269s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 269s Selecting previously unselected package libjs-microplugin.js. 269s Preparing to unpack .../072-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 269s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 269s Selecting previously unselected package libjs-jquery-selectize.js. 269s Preparing to unpack .../073-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 269s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 269s Selecting previously unselected package libjs-jquery-ui. 269s Preparing to unpack .../074-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 269s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 269s Selecting previously unselected package libjs-json. 269s Preparing to unpack .../075-libjs-json_0~20221030+~1.0.8-1_all.deb ... 269s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 269s Selecting previously unselected package libjs-lunr. 269s Preparing to unpack .../076-libjs-lunr_2.3.9~dfsg-2_all.deb ... 269s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 270s Selecting previously unselected package libjs-prettify. 270s Preparing to unpack .../077-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 270s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 270s Selecting previously unselected package libkpathsea6:ppc64el. 270s Preparing to unpack .../078-libkpathsea6_2023.20230311.66589-9build3_ppc64el.deb ... 270s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9build3) ... 270s Selecting previously unselected package liblapack3:ppc64el. 270s Preparing to unpack .../079-liblapack3_3.12.0-3_ppc64el.deb ... 270s Unpacking liblapack3:ppc64el (3.12.0-3) ... 270s Selecting previously unselected package liblapack-dev:ppc64el. 270s Preparing to unpack .../080-liblapack-dev_3.12.0-3_ppc64el.deb ... 270s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 270s Selecting previously unselected package libncurses-dev:ppc64el. 270s Preparing to unpack .../081-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 270s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 270s Selecting previously unselected package libthai-data. 270s Preparing to unpack .../082-libthai-data_0.1.29-2_all.deb ... 270s Unpacking libthai-data (0.1.29-2) ... 270s Selecting previously unselected package libthai0:ppc64el. 270s Preparing to unpack .../083-libthai0_0.1.29-2_ppc64el.deb ... 270s Unpacking libthai0:ppc64el (0.1.29-2) ... 270s Selecting previously unselected package libpango-1.0-0:ppc64el. 270s Preparing to unpack .../084-libpango-1.0-0_1.52.1+ds-1build1_ppc64el.deb ... 270s Unpacking libpango-1.0-0:ppc64el (1.52.1+ds-1build1) ... 270s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 270s Preparing to unpack .../085-libpangoft2-1.0-0_1.52.1+ds-1build1_ppc64el.deb ... 270s Unpacking libpangoft2-1.0-0:ppc64el (1.52.1+ds-1build1) ... 270s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 270s Preparing to unpack .../086-libpangocairo-1.0-0_1.52.1+ds-1build1_ppc64el.deb ... 270s Unpacking libpangocairo-1.0-0:ppc64el (1.52.1+ds-1build1) ... 270s Selecting previously unselected package libpaper1:ppc64el. 270s Preparing to unpack .../087-libpaper1_1.1.29_ppc64el.deb ... 270s Unpacking libpaper1:ppc64el (1.1.29) ... 270s Selecting previously unselected package libpaper-utils. 270s Preparing to unpack .../088-libpaper-utils_1.1.29_ppc64el.deb ... 270s Unpacking libpaper-utils (1.1.29) ... 270s Selecting previously unselected package libpcre2-16-0:ppc64el. 270s Preparing to unpack .../089-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 270s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 270s Selecting previously unselected package libpcre2-32-0:ppc64el. 270s Preparing to unpack .../090-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 270s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 270s Selecting previously unselected package libpcre2-posix3:ppc64el. 270s Preparing to unpack .../091-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 270s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 270s Selecting previously unselected package libpcre2-dev:ppc64el. 270s Preparing to unpack .../092-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 270s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 270s Selecting previously unselected package libpkgconf3:ppc64el. 270s Preparing to unpack .../093-libpkgconf3_1.8.1-2_ppc64el.deb ... 270s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 270s Selecting previously unselected package zlib1g-dev:ppc64el. 271s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg-3.1ubuntu2_ppc64el.deb ... 271s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3.1ubuntu2) ... 271s Selecting previously unselected package libpng-dev:ppc64el. 271s Preparing to unpack .../095-libpng-dev_1.6.43-5build1_ppc64el.deb ... 271s Unpacking libpng-dev:ppc64el (1.6.43-5build1) ... 271s Selecting previously unselected package libpotrace0:ppc64el. 271s Preparing to unpack .../096-libpotrace0_1.16-2_ppc64el.deb ... 271s Unpacking libpotrace0:ppc64el (1.16-2) ... 271s Selecting previously unselected package libptexenc1:ppc64el. 271s Preparing to unpack .../097-libptexenc1_2023.20230311.66589-9build3_ppc64el.deb ... 271s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9build3) ... 271s Selecting previously unselected package libreadline-dev:ppc64el. 271s Preparing to unpack .../098-libreadline-dev_8.2-4build1_ppc64el.deb ... 271s Unpacking libreadline-dev:ppc64el (8.2-4build1) ... 271s Selecting previously unselected package libsm6:ppc64el. 271s Preparing to unpack .../099-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 271s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 271s Selecting previously unselected package libsynctex2:ppc64el. 271s Preparing to unpack .../100-libsynctex2_2023.20230311.66589-9build3_ppc64el.deb ... 271s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9build3) ... 271s Selecting previously unselected package libtcl8.6:ppc64el. 271s Preparing to unpack .../101-libtcl8.6_8.6.14+dfsg-1build1_ppc64el.deb ... 271s Unpacking libtcl8.6:ppc64el (8.6.14+dfsg-1build1) ... 271s Selecting previously unselected package libteckit0:ppc64el. 271s Preparing to unpack .../102-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 271s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 271s Selecting previously unselected package libtexlua53-5:ppc64el. 271s Preparing to unpack .../103-libtexlua53-5_2023.20230311.66589-9build3_ppc64el.deb ... 271s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9build3) ... 271s Selecting previously unselected package libxft2:ppc64el. 271s Preparing to unpack .../104-libxft2_2.3.6-1_ppc64el.deb ... 271s Unpacking libxft2:ppc64el (2.3.6-1) ... 271s Selecting previously unselected package libxss1:ppc64el. 271s Preparing to unpack .../105-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 271s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 271s Selecting previously unselected package libtk8.6:ppc64el. 271s Preparing to unpack .../106-libtk8.6_8.6.14-1build1_ppc64el.deb ... 271s Unpacking libtk8.6:ppc64el (8.6.14-1build1) ... 271s Selecting previously unselected package libxt6t64:ppc64el. 271s Preparing to unpack .../107-libxt6t64_1%3a1.2.1-1.2build1_ppc64el.deb ... 271s Unpacking libxt6t64:ppc64el (1:1.2.1-1.2build1) ... 271s Selecting previously unselected package libxmu6:ppc64el. 271s Preparing to unpack .../108-libxmu6_2%3a1.1.3-3build2_ppc64el.deb ... 271s Unpacking libxmu6:ppc64el (2:1.1.3-3build2) ... 271s Selecting previously unselected package libxaw7:ppc64el. 271s Preparing to unpack .../109-libxaw7_2%3a1.0.14-1build2_ppc64el.deb ... 271s Unpacking libxaw7:ppc64el (2:1.0.14-1build2) ... 271s Selecting previously unselected package libxi6:ppc64el. 271s Preparing to unpack .../110-libxi6_2%3a1.8.1-1_ppc64el.deb ... 271s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 271s Selecting previously unselected package libzzip-0-13t64:ppc64el. 271s Preparing to unpack .../111-libzzip-0-13t64_0.13.72+dfsg.1-1.2build1_ppc64el.deb ... 271s Unpacking libzzip-0-13t64:ppc64el (0.13.72+dfsg.1-1.2build1) ... 271s Selecting previously unselected package node-bootstrap-sass. 271s Preparing to unpack .../112-node-bootstrap-sass_3.4.3-2_all.deb ... 271s Unpacking node-bootstrap-sass (3.4.3-2) ... 271s Selecting previously unselected package node-html5shiv. 271s Preparing to unpack .../113-node-html5shiv_3.7.3+dfsg-5_all.deb ... 271s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 271s Selecting previously unselected package node-normalize.css. 271s Preparing to unpack .../114-node-normalize.css_8.0.1-5_all.deb ... 271s Unpacking node-normalize.css (8.0.1-5) ... 272s Selecting previously unselected package pandoc-data. 272s Preparing to unpack .../115-pandoc-data_3.1.3-1_all.deb ... 272s Unpacking pandoc-data (3.1.3-1) ... 272s Selecting previously unselected package pandoc. 272s Preparing to unpack .../116-pandoc_3.1.3+ds-2_ppc64el.deb ... 272s Unpacking pandoc (3.1.3+ds-2) ... 273s Selecting previously unselected package pkgconf-bin. 273s Preparing to unpack .../117-pkgconf-bin_1.8.1-2_ppc64el.deb ... 273s Unpacking pkgconf-bin (1.8.1-2) ... 273s Selecting previously unselected package pkgconf:ppc64el. 273s Preparing to unpack .../118-pkgconf_1.8.1-2_ppc64el.deb ... 273s Unpacking pkgconf:ppc64el (1.8.1-2) ... 273s Selecting previously unselected package pkg-config:ppc64el. 273s Preparing to unpack .../119-pkg-config_1.8.1-2_ppc64el.deb ... 273s Unpacking pkg-config:ppc64el (1.8.1-2) ... 273s Selecting previously unselected package zip. 273s Preparing to unpack .../120-zip_3.0-13_ppc64el.deb ... 273s Unpacking zip (3.0-13) ... 273s Selecting previously unselected package unzip. 273s Preparing to unpack .../121-unzip_6.0-28ubuntu3_ppc64el.deb ... 273s Unpacking unzip (6.0-28ubuntu3) ... 273s Selecting previously unselected package xdg-utils. 273s Preparing to unpack .../122-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 273s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 273s Selecting previously unselected package r-base-core. 273s Preparing to unpack .../123-r-base-core_4.3.3-2build2_ppc64el.deb ... 273s Unpacking r-base-core (4.3.3-2build2) ... 274s Selecting previously unselected package liblzma-dev:ppc64el. 274s Preparing to unpack .../124-liblzma-dev_5.6.1+really5.4.5-1_ppc64el.deb ... 274s Unpacking liblzma-dev:ppc64el (5.6.1+really5.4.5-1) ... 274s Selecting previously unselected package r-base-dev. 274s Preparing to unpack .../125-r-base-dev_4.3.3-2build2_all.deb ... 274s Unpacking r-base-dev (4.3.3-2build2) ... 274s Selecting previously unselected package pkg-r-autopkgtest. 274s Preparing to unpack .../126-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 274s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 274s Selecting previously unselected package r-bioc-biocgenerics. 274s Preparing to unpack .../127-r-bioc-biocgenerics_0.48.1-2_all.deb ... 274s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 274s Selecting previously unselected package r-bioc-biobase. 274s Preparing to unpack .../128-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 274s Unpacking r-bioc-biobase (2.62.0-1) ... 274s Selecting previously unselected package r-bioc-s4vectors. 274s Preparing to unpack .../129-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 274s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 274s Selecting previously unselected package r-bioc-iranges. 274s Preparing to unpack .../130-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 274s Unpacking r-bioc-iranges (2.36.0-1) ... 274s Selecting previously unselected package r-cran-dbi. 274s Preparing to unpack .../131-r-cran-dbi_1.2.2-1_all.deb ... 274s Unpacking r-cran-dbi (1.2.2-1) ... 274s Selecting previously unselected package r-cran-bit. 274s Preparing to unpack .../132-r-cran-bit_4.0.5-1_ppc64el.deb ... 274s Unpacking r-cran-bit (4.0.5-1) ... 274s Selecting previously unselected package r-cran-bit64. 274s Preparing to unpack .../133-r-cran-bit64_4.0.5-1_ppc64el.deb ... 274s Unpacking r-cran-bit64 (4.0.5-1) ... 274s Selecting previously unselected package r-cran-rlang. 274s Preparing to unpack .../134-r-cran-rlang_1.1.3-1_ppc64el.deb ... 274s Unpacking r-cran-rlang (1.1.3-1) ... 274s Selecting previously unselected package r-cran-cli. 274s Preparing to unpack .../135-r-cran-cli_3.6.2-1_ppc64el.deb ... 274s Unpacking r-cran-cli (3.6.2-1) ... 275s Selecting previously unselected package r-cran-glue. 275s Preparing to unpack .../136-r-cran-glue_1.7.0-1_ppc64el.deb ... 275s Unpacking r-cran-glue (1.7.0-1) ... 275s Selecting previously unselected package r-cran-lifecycle. 275s Preparing to unpack .../137-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 275s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 275s Selecting previously unselected package r-cran-vctrs. 275s Preparing to unpack .../138-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 275s Unpacking r-cran-vctrs (0.6.5-1) ... 275s Selecting previously unselected package r-cran-blob. 275s Preparing to unpack .../139-r-cran-blob_1.2.4-1_all.deb ... 275s Unpacking r-cran-blob (1.2.4-1) ... 275s Selecting previously unselected package r-cran-fastmap. 275s Preparing to unpack .../140-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 275s Unpacking r-cran-fastmap (1.1.1-1) ... 275s Selecting previously unselected package r-cran-cachem. 275s Preparing to unpack .../141-r-cran-cachem_1.0.8-1_ppc64el.deb ... 275s Unpacking r-cran-cachem (1.0.8-1) ... 275s Selecting previously unselected package r-cran-memoise. 275s Preparing to unpack .../142-r-cran-memoise_2.0.1-1_all.deb ... 275s Unpacking r-cran-memoise (2.0.1-1) ... 275s Selecting previously unselected package r-cran-pkgconfig. 275s Preparing to unpack .../143-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 275s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 275s Selecting previously unselected package r-cran-plogr. 275s Preparing to unpack .../144-r-cran-plogr_0.2.0-3build1_all.deb ... 275s Unpacking r-cran-plogr (0.2.0-3build1) ... 275s Selecting previously unselected package r-cran-cpp11. 275s Preparing to unpack .../145-r-cran-cpp11_0.4.7-1_all.deb ... 275s Unpacking r-cran-cpp11 (0.4.7-1) ... 275s Selecting previously unselected package r-cran-rsqlite. 275s Preparing to unpack .../146-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 275s Unpacking r-cran-rsqlite (2.3.4-1) ... 275s Selecting previously unselected package r-cran-curl. 275s Preparing to unpack .../147-r-cran-curl_5.2.0+dfsg-1build2_ppc64el.deb ... 275s Unpacking r-cran-curl (5.2.0+dfsg-1build2) ... 275s Selecting previously unselected package r-cran-jsonlite. 275s Preparing to unpack .../148-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 275s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 275s Selecting previously unselected package r-cran-mime. 275s Preparing to unpack .../149-r-cran-mime_0.12-1_ppc64el.deb ... 275s Unpacking r-cran-mime (0.12-1) ... 275s Selecting previously unselected package r-cran-sys. 275s Preparing to unpack .../150-r-cran-sys_3.4.2-1_ppc64el.deb ... 275s Unpacking r-cran-sys (3.4.2-1) ... 275s Selecting previously unselected package r-cran-askpass. 275s Preparing to unpack .../151-r-cran-askpass_1.2.0-1_ppc64el.deb ... 275s Unpacking r-cran-askpass (1.2.0-1) ... 275s Selecting previously unselected package r-cran-openssl. 275s Preparing to unpack .../152-r-cran-openssl_2.1.1+dfsg-2build2_ppc64el.deb ... 275s Unpacking r-cran-openssl (2.1.1+dfsg-2build2) ... 275s Selecting previously unselected package r-cran-r6. 275s Preparing to unpack .../153-r-cran-r6_2.5.1-1_all.deb ... 275s Unpacking r-cran-r6 (2.5.1-1) ... 275s Selecting previously unselected package r-cran-httr. 275s Preparing to unpack .../154-r-cran-httr_1.4.7+dfsg-1_all.deb ... 275s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 276s Selecting previously unselected package r-cran-png. 276s Preparing to unpack .../155-r-cran-png_0.1-8-1build2_ppc64el.deb ... 276s Unpacking r-cran-png (0.1-8-1build2) ... 276s Selecting previously unselected package r-bioc-zlibbioc. 276s Preparing to unpack .../156-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 276s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 276s Selecting previously unselected package r-bioc-xvector. 276s Preparing to unpack .../157-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 276s Unpacking r-bioc-xvector (0.42.0-1) ... 276s Selecting previously unselected package r-cran-bitops. 276s Preparing to unpack .../158-r-cran-bitops_1.0-7-1_ppc64el.deb ... 276s Unpacking r-cran-bitops (1.0-7-1) ... 276s Selecting previously unselected package r-cran-rcurl. 276s Preparing to unpack .../159-r-cran-rcurl_1.98-1.14+dfsg-1build2_ppc64el.deb ... 276s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 276s Selecting previously unselected package r-bioc-genomeinfodbdata. 276s Preparing to unpack .../160-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 276s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 276s Selecting previously unselected package r-bioc-genomeinfodb. 276s Preparing to unpack .../161-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 276s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 276s Selecting previously unselected package r-cran-crayon. 276s Preparing to unpack .../162-r-cran-crayon_1.5.2-1_all.deb ... 276s Unpacking r-cran-crayon (1.5.2-1) ... 276s Selecting previously unselected package r-bioc-biostrings. 276s Preparing to unpack .../163-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 276s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 276s Selecting previously unselected package r-bioc-keggrest. 276s Preparing to unpack .../164-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 276s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 276s Selecting previously unselected package r-bioc-annotationdbi. 276s Preparing to unpack .../165-r-bioc-annotationdbi_1.64.1-1_all.deb ... 276s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 277s Selecting previously unselected package r-cran-generics. 277s Preparing to unpack .../166-r-cran-generics_0.1.3-1_all.deb ... 277s Unpacking r-cran-generics (0.1.3-1) ... 277s Selecting previously unselected package r-cran-magrittr. 277s Preparing to unpack .../167-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 277s Unpacking r-cran-magrittr (2.0.3-1) ... 277s Selecting previously unselected package r-cran-fansi. 277s Preparing to unpack .../168-r-cran-fansi_1.0.5-1_ppc64el.deb ... 277s Unpacking r-cran-fansi (1.0.5-1) ... 277s Selecting previously unselected package r-cran-utf8. 277s Preparing to unpack .../169-r-cran-utf8_1.2.4-1_ppc64el.deb ... 277s Unpacking r-cran-utf8 (1.2.4-1) ... 277s Selecting previously unselected package r-cran-pillar. 277s Preparing to unpack .../170-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 277s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 277s Selecting previously unselected package r-cran-tibble. 277s Preparing to unpack .../171-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 277s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 277s Selecting previously unselected package r-cran-withr. 277s Preparing to unpack .../172-r-cran-withr_2.5.0-1_all.deb ... 277s Unpacking r-cran-withr (2.5.0-1) ... 277s Selecting previously unselected package r-cran-tidyselect. 277s Preparing to unpack .../173-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 277s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 277s Selecting previously unselected package r-cran-dplyr. 277s Preparing to unpack .../174-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 277s Unpacking r-cran-dplyr (1.1.4-1) ... 277s Selecting previously unselected package r-cran-purrr. 277s Preparing to unpack .../175-r-cran-purrr_1.0.2-1_ppc64el.deb ... 277s Unpacking r-cran-purrr (1.0.2-1) ... 277s Selecting previously unselected package r-cran-stringi. 277s Preparing to unpack .../176-r-cran-stringi_1.8.3-1_ppc64el.deb ... 277s Unpacking r-cran-stringi (1.8.3-1) ... 277s Selecting previously unselected package r-cran-stringr. 277s Preparing to unpack .../177-r-cran-stringr_1.5.1-1_all.deb ... 277s Unpacking r-cran-stringr (1.5.1-1) ... 277s Selecting previously unselected package r-cran-tidyr. 277s Preparing to unpack .../178-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 277s Unpacking r-cran-tidyr (1.3.1-1) ... 277s Selecting previously unselected package r-cran-dbplyr. 277s Preparing to unpack .../179-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 277s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 278s Selecting previously unselected package r-cran-filelock. 278s Preparing to unpack .../180-r-cran-filelock_1.0.3-1_ppc64el.deb ... 278s Unpacking r-cran-filelock (1.0.3-1) ... 278s Selecting previously unselected package r-bioc-biocfilecache. 278s Preparing to unpack .../181-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 278s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 278s Selecting previously unselected package r-cran-biocmanager. 278s Preparing to unpack .../182-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 278s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 278s Selecting previously unselected package r-bioc-biocversion. 278s Preparing to unpack .../183-r-bioc-biocversion_3.18.1-1_all.deb ... 278s Unpacking r-bioc-biocversion (3.18.1-1) ... 278s Selecting previously unselected package r-cran-rappdirs. 278s Preparing to unpack .../184-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 278s Unpacking r-cran-rappdirs (0.3.3-1) ... 278s Selecting previously unselected package r-cran-yaml. 278s Preparing to unpack .../185-r-cran-yaml_2.3.8-1_ppc64el.deb ... 278s Unpacking r-cran-yaml (2.3.8-1) ... 278s Selecting previously unselected package r-cran-littler. 278s Preparing to unpack .../186-r-cran-littler_0.3.19-1_ppc64el.deb ... 278s Unpacking r-cran-littler (0.3.19-1) ... 278s Selecting previously unselected package r-cran-pkgkitten. 278s Preparing to unpack .../187-r-cran-pkgkitten_0.2.3-1_all.deb ... 278s Unpacking r-cran-pkgkitten (0.2.3-1) ... 278s Selecting previously unselected package r-cran-rcpp. 278s Preparing to unpack .../188-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 278s Unpacking r-cran-rcpp (1.0.12-1) ... 278s Selecting previously unselected package r-cran-later. 278s Preparing to unpack .../189-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 278s Unpacking r-cran-later (1.3.2+dfsg-1) ... 278s Selecting previously unselected package r-cran-promises. 278s Preparing to unpack .../190-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 278s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 278s Selecting previously unselected package r-cran-httpuv. 278s Preparing to unpack .../191-r-cran-httpuv_1.6.14+dfsg-1build2_ppc64el.deb ... 278s Unpacking r-cran-httpuv (1.6.14+dfsg-1build2) ... 278s Selecting previously unselected package r-cran-xtable. 278s Preparing to unpack .../192-r-cran-xtable_1%3a1.8-4-2_all.deb ... 278s Unpacking r-cran-xtable (1:1.8-4-2) ... 278s Selecting previously unselected package r-cran-base64enc. 278s Preparing to unpack .../193-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 278s Unpacking r-cran-base64enc (0.1-3-3) ... 278s Selecting previously unselected package r-cran-digest. 278s Preparing to unpack .../194-r-cran-digest_0.6.34-1_ppc64el.deb ... 278s Unpacking r-cran-digest (0.6.34-1) ... 278s Selecting previously unselected package r-cran-ellipsis. 278s Preparing to unpack .../195-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 278s Unpacking r-cran-ellipsis (0.3.2-2) ... 279s Selecting previously unselected package r-cran-htmltools. 279s Preparing to unpack .../196-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 279s Unpacking r-cran-htmltools (0.5.7-1) ... 279s Selecting previously unselected package r-cran-fontawesome. 279s Preparing to unpack .../197-r-cran-fontawesome_0.5.2-1_all.deb ... 279s Unpacking r-cran-fontawesome (0.5.2-1) ... 279s Selecting previously unselected package r-cran-sourcetools. 279s Preparing to unpack .../198-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 279s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 279s Selecting previously unselected package r-cran-commonmark. 279s Preparing to unpack .../199-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 279s Unpacking r-cran-commonmark (1.9.1-1) ... 279s Selecting previously unselected package r-cran-jquerylib. 279s Preparing to unpack .../200-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 279s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 279s Selecting previously unselected package r-cran-fs. 279s Preparing to unpack .../201-r-cran-fs_1.6.3+dfsg-1build2_ppc64el.deb ... 279s Unpacking r-cran-fs (1.6.3+dfsg-1build2) ... 279s Selecting previously unselected package r-cran-sass. 279s Preparing to unpack .../202-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 279s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 279s Selecting previously unselected package r-cran-bslib. 279s Preparing to unpack .../203-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 279s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 279s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 279s Preparing to unpack .../204-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 279s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 279s Selecting previously unselected package r-cran-shiny. 279s Preparing to unpack .../205-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 279s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 279s Selecting previously unselected package r-cran-evaluate. 279s Preparing to unpack .../206-r-cran-evaluate_0.23-1_all.deb ... 279s Unpacking r-cran-evaluate (0.23-1) ... 280s Selecting previously unselected package r-cran-xfun. 280s Preparing to unpack .../207-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 280s Unpacking r-cran-xfun (0.41+dfsg-1) ... 280s Selecting previously unselected package r-cran-highr. 280s Preparing to unpack .../208-r-cran-highr_0.10+dfsg-1_all.deb ... 280s Unpacking r-cran-highr (0.10+dfsg-1) ... 280s Selecting previously unselected package libjs-mathjax. 280s Preparing to unpack .../209-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 280s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 281s Selecting previously unselected package r-cran-knitr. 281s Preparing to unpack .../210-r-cran-knitr_1.45+dfsg-1_all.deb ... 281s Unpacking r-cran-knitr (1.45+dfsg-1) ... 281s Selecting previously unselected package r-cran-tinytex. 281s Preparing to unpack .../211-r-cran-tinytex_0.49-1_all.deb ... 281s Unpacking r-cran-tinytex (0.49-1) ... 281s Selecting previously unselected package libjs-modernizr. 281s Preparing to unpack .../212-libjs-modernizr_2.6.2+ds1-5_all.deb ... 281s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 281s Selecting previously unselected package r-cran-rmarkdown. 281s Preparing to unpack .../213-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 281s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 281s Selecting previously unselected package r-cran-htmlwidgets. 281s Preparing to unpack .../214-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 281s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 281s Selecting previously unselected package r-cran-lazyeval. 281s Preparing to unpack .../215-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ... 281s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 281s Selecting previously unselected package r-cran-crosstalk. 281s Preparing to unpack .../216-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 281s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 281s Selecting previously unselected package r-cran-dt. 281s Preparing to unpack .../217-r-cran-dt_0.31+dfsg-1_all.deb ... 281s Unpacking r-cran-dt (0.31+dfsg-1) ... 281s Selecting previously unselected package r-bioc-interactivedisplaybase. 281s Preparing to unpack .../218-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 281s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 281s Selecting previously unselected package r-bioc-annotationhub. 281s Preparing to unpack .../219-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 281s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 281s Selecting previously unselected package r-bioc-biocio. 281s Preparing to unpack .../220-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 281s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 281s Selecting previously unselected package r-cran-formatr. 281s Preparing to unpack .../221-r-cran-formatr_1.14-1_all.deb ... 281s Unpacking r-cran-formatr (1.14-1) ... 281s Selecting previously unselected package r-cran-lambda.r. 281s Preparing to unpack .../222-r-cran-lambda.r_1.2.4-2build1_all.deb ... 281s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 281s Selecting previously unselected package r-cran-futile.options. 281s Preparing to unpack .../223-r-cran-futile.options_1.0.1-3build1_all.deb ... 281s Unpacking r-cran-futile.options (1.0.1-3build1) ... 281s Selecting previously unselected package r-cran-futile.logger. 281s Preparing to unpack .../224-r-cran-futile.logger_1.4.3-4build1_all.deb ... 281s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 281s Selecting previously unselected package r-cran-snow. 281s Preparing to unpack .../225-r-cran-snow_1%3a0.4.4-2_all.deb ... 281s Unpacking r-cran-snow (1:0.4.4-2) ... 282s Selecting previously unselected package r-cran-codetools. 282s Preparing to unpack .../226-r-cran-codetools_0.2-19-1_all.deb ... 282s Unpacking r-cran-codetools (0.2-19-1) ... 282s Selecting previously unselected package r-cran-bh. 282s Preparing to unpack .../227-r-cran-bh_1.84.0-1_all.deb ... 282s Unpacking r-cran-bh (1.84.0-1) ... 282s Selecting previously unselected package r-bioc-biocparallel. 282s Preparing to unpack .../228-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 282s Unpacking r-bioc-biocparallel (1.36.0-1) ... 282s Selecting previously unselected package r-cran-bookdown. 282s Preparing to unpack .../229-r-cran-bookdown_0.37+dfsg-1_all.deb ... 282s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 282s Selecting previously unselected package tex-common. 282s Preparing to unpack .../230-tex-common_6.18_all.deb ... 282s Unpacking tex-common (6.18) ... 282s Selecting previously unselected package t1utils. 282s Preparing to unpack .../231-t1utils_1.41-4build2_ppc64el.deb ... 282s Unpacking t1utils (1.41-4build2) ... 282s Selecting previously unselected package texlive-binaries. 282s Preparing to unpack .../232-texlive-binaries_2023.20230311.66589-9build3_ppc64el.deb ... 282s Unpacking texlive-binaries (2023.20230311.66589-9build3) ... 282s Selecting previously unselected package texlive-base. 282s Preparing to unpack .../233-texlive-base_2023.20240207-1_all.deb ... 282s Unpacking texlive-base (2023.20240207-1) ... 284s Selecting previously unselected package texlive-latex-base. 284s Preparing to unpack .../234-texlive-latex-base_2023.20240207-1_all.deb ... 284s Unpacking texlive-latex-base (2023.20240207-1) ... 284s Selecting previously unselected package texlive-bibtex-extra. 284s Preparing to unpack .../235-texlive-bibtex-extra_2023.20240207-1_all.deb ... 284s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 287s Selecting previously unselected package r-bioc-biocstyle. 287s Preparing to unpack .../236-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 287s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 287s Selecting previously unselected package r-cran-xml. 287s Preparing to unpack .../237-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 287s Unpacking r-cran-xml (3.99-0.16.1-1) ... 287s Selecting previously unselected package r-cran-hms. 287s Preparing to unpack .../238-r-cran-hms_1.1.3-1_all.deb ... 287s Unpacking r-cran-hms (1.1.3-1) ... 287s Selecting previously unselected package r-cran-prettyunits. 287s Preparing to unpack .../239-r-cran-prettyunits_1.2.0-1_all.deb ... 287s Unpacking r-cran-prettyunits (1.2.0-1) ... 287s Selecting previously unselected package r-cran-progress. 287s Preparing to unpack .../240-r-cran-progress_1.2.3-1_all.deb ... 287s Unpacking r-cran-progress (1.2.3-1) ... 287s Selecting previously unselected package r-cran-xml2. 287s Preparing to unpack .../241-r-cran-xml2_1.3.6-1_ppc64el.deb ... 287s Unpacking r-cran-xml2 (1.3.6-1) ... 287s Selecting previously unselected package r-bioc-biomart. 287s Preparing to unpack .../242-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 287s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 287s Selecting previously unselected package r-bioc-genomicranges. 287s Preparing to unpack .../243-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 287s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 287s Selecting previously unselected package r-bioc-rhtslib. 287s Preparing to unpack .../244-r-bioc-rhtslib_2.4.1+dfsg-3build2_ppc64el.deb ... 287s Unpacking r-bioc-rhtslib (2.4.1+dfsg-3build2) ... 287s Selecting previously unselected package r-bioc-rsamtools. 287s Preparing to unpack .../245-r-bioc-rsamtools_2.18.0+dfsg-1build1_ppc64el.deb ... 287s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 288s Selecting previously unselected package r-cran-matrixstats. 288s Preparing to unpack .../246-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 288s Unpacking r-cran-matrixstats (1.2.0-1) ... 288s Selecting previously unselected package r-bioc-matrixgenerics. 288s Preparing to unpack .../247-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 288s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 288s Selecting previously unselected package r-cran-lattice. 288s Preparing to unpack .../248-r-cran-lattice_0.22-5-1_ppc64el.deb ... 288s Unpacking r-cran-lattice (0.22-5-1) ... 288s Selecting previously unselected package r-cran-matrix. 288s Preparing to unpack .../249-r-cran-matrix_1.6-5-1_ppc64el.deb ... 288s Unpacking r-cran-matrix (1.6-5-1) ... 288s Selecting previously unselected package r-cran-abind. 288s Preparing to unpack .../250-r-cran-abind_1.4-5-2_all.deb ... 288s Unpacking r-cran-abind (1.4-5-2) ... 288s Selecting previously unselected package r-bioc-s4arrays. 288s Preparing to unpack .../251-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 288s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 288s Selecting previously unselected package r-bioc-sparsearray. 288s Preparing to unpack .../252-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 288s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 288s Selecting previously unselected package r-bioc-delayedarray. 288s Preparing to unpack .../253-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 288s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 288s Selecting previously unselected package r-bioc-summarizedexperiment. 288s Preparing to unpack .../254-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 288s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 288s Selecting previously unselected package r-bioc-genomicalignments. 288s Preparing to unpack .../255-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 288s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 288s Selecting previously unselected package r-cran-rjson. 288s Preparing to unpack .../256-r-cran-rjson_0.2.21-1_ppc64el.deb ... 288s Unpacking r-cran-rjson (0.2.21-1) ... 288s Selecting previously unselected package r-cran-restfulr. 288s Preparing to unpack .../257-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 288s Unpacking r-cran-restfulr (0.0.15-1) ... 288s Selecting previously unselected package r-bioc-rtracklayer. 288s Preparing to unpack .../258-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 288s Unpacking 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r-cran-futile.logger (1.4.3-4build1) ... 297s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 297s Setting up r-cran-later (1.3.2+dfsg-1) ... 297s Setting up r-cran-matrix (1.6-5-1) ... 297s Setting up r-cran-tinytex (0.49-1) ... 297s Setting up r-cran-knitr (1.45+dfsg-1) ... 297s Setting up r-cran-mgcv (1.9-1-1) ... 297s Setting up g++ (4:13.2.0-7ubuntu1) ... 297s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 297s Setting up r-cran-cachem (1.0.8-1) ... 297s Setting up build-essential (12.10ubuntu1) ... 297s Setting up r-bioc-iranges (2.36.0-1) ... 297s Setting up r-cran-rjson (0.2.21-1) ... 297s Setting up r-cran-rcurl (1.98-1.14+dfsg-1build2) ... 297s Setting up r-cran-restfulr (0.0.15-1) ... 297s Setting up r-cran-vctrs (0.6.5-1) ... 297s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 297s Setting up r-cran-ellipsis (0.3.2-2) ... 297s Setting up r-cran-openssl (2.1.1+dfsg-2build2) ... 297s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 297s Setting up r-cran-stringr (1.5.1-1) ... 297s Setting up r-bioc-biocparallel (1.36.0-1) ... 297s Setting up r-bioc-rhtslib (2.4.1+dfsg-3build2) ... 297s Setting up r-cran-xml2 (1.3.6-1) ... 297s Setting up r-cran-munsell (0.5.0-2build1) ... 297s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 297s Setting up r-cran-survival (3.5-8-1) ... 297s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 297s Setting up gfortran (4:13.2.0-7ubuntu1) ... 297s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 297s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 297s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 297s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 297s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 297s Setting up r-bioc-snpstats (1.52.0+dfsg-1) ... 297s Setting up texlive-bibtex-extra (2023.20240207-1) ... 297s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 297s Setting up r-cran-httr (1.4.7+dfsg-1) ... 297s Setting up r-cran-hms (1.1.3-1) ... 297s Setting up r-cran-scales (1.3.0-1) ... 297s Setting up r-cran-memoise (2.0.1-1) ... 297s Setting up r-cran-promises (1.2.1+dfsg-1) ... 297s Setting up r-cran-purrr (1.0.2-1) ... 297s Setting up r-cran-blob (1.2.4-1) ... 297s Setting up r-cran-htmltools (0.5.7-1) ... 297s Setting up r-bioc-xvector (0.42.0-1) ... 297s Setting up r-cran-sass (0.4.8+dfsg-1) ... 297s Setting up r-cran-dplyr (1.1.4-1) ... 297s Setting up r-cran-rsqlite (2.3.4-1) ... 297s Setting up r-cran-progress (1.2.3-1) ... 297s Setting up r-base-dev (4.3.3-2build2) ... 297s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 297s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 297s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 297s Setting up r-cran-httpuv (1.6.14+dfsg-1build2) ... 297s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 297s Setting up r-cran-fontawesome (0.5.2-1) ... 297s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 297s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 297s Setting up r-cran-tidyr (1.3.1-1) ... 297s Setting up r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 297s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 297s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 297s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 297s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 297s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 297s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 297s Setting up r-bioc-annotationdbi (1.64.1-1) ... 297s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 297s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 297s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 297s Setting up r-bioc-genomicalignments (1.38.2-1) ... 297s Setting up r-cran-bookdown (0.37+dfsg-1) ... 297s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 297s Setting up r-bioc-rtracklayer (1.62.0-1) ... 297s Setting up r-bioc-genomicfeatures (1.54.3+dfsg-1) ... 297s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 297s Setting up r-bioc-bsgenome (1.70.2-1) ... 297s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 297s Setting up r-cran-dt (0.31+dfsg-1) ... 297s Setting up r-bioc-variantannotation (1.48.1-1build1) ... 297s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 297s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 297s Setting up autopkgtest-satdep (0) ... 297s Processing triggers for man-db (2.12.0-4build1) ... 299s Processing triggers for install-info (7.1-3build2) ... 299s Processing triggers for libc-bin (2.39-0ubuntu8) ... 299s Processing triggers for tex-common (6.18) ... 300s Running updmap-sys. This may take some time... done. 300s Running mktexlsr /var/lib/texmf ... done. 300s Building format(s) --all. 354s This may take some time... done. 368s (Reading database ... 122420 files and directories currently installed.) 368s Removing autopkgtest-satdep (0) ... 368s autopkgtest [22:00:00]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 368s autopkgtest [22:00:00]: test pkg-r-autopkgtest: [----------------------- 369s Test: Try to load the R library VariantAnnotation 369s 369s R version 4.3.3 (2024-02-29) -- "Angel Food Cake" 369s Copyright (C) 2024 The R Foundation for Statistical Computing 369s Platform: powerpc64le-unknown-linux-gnu (64-bit) 369s 369s R is free software and comes with ABSOLUTELY NO WARRANTY. 369s You are welcome to redistribute it under certain conditions. 369s Type 'license()' or 'licence()' for distribution details. 369s 369s R is a collaborative project with many contributors. 369s Type 'contributors()' for more information and 369s 'citation()' on how to cite R or R packages in publications. 369s 369s Type 'demo()' for some demos, 'help()' for on-line help, or 369s 'help.start()' for an HTML browser interface to help. 369s Type 'q()' to quit R. 369s 369s > library('VariantAnnotation') 369s Loading required package: BiocGenerics 369s 369s Attaching package: ‘BiocGenerics’ 369s 369s The following objects are masked from ‘package:stats’: 369s 369s IQR, mad, sd, var, xtabs 369s 369s The following objects are masked from ‘package:base’: 369s 369s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 369s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 369s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 369s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 369s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 369s table, tapply, union, unique, unsplit, which.max, which.min 369s 369s Loading required package: MatrixGenerics 369s Loading required package: matrixStats 369s 369s Attaching package: ‘MatrixGenerics’ 369s 369s The following objects are masked from ‘package:matrixStats’: 369s 369s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 369s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 369s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 369s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 369s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 369s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 369s colWeightedMeans, colWeightedMedians, colWeightedSds, 369s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 369s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 369s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 369s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 369s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 369s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 369s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 369s rowWeightedSds, rowWeightedVars 369s 369s Loading required package: GenomeInfoDb 369s Loading required package: S4Vectors 369s Loading required package: stats4 370s 370s Attaching package: ‘S4Vectors’ 370s 370s The following object is masked from ‘package:utils’: 370s 370s findMatches 370s 370s The following objects are masked from ‘package:base’: 370s 370s expand.grid, I, unname 370s 370s Loading required package: IRanges 371s Loading required package: GenomicRanges 372s Loading required package: SummarizedExperiment 372s Loading required package: Biobase 373s Welcome to Bioconductor 373s 373s Vignettes contain introductory material; view with 373s 'browseVignettes()'. To cite Bioconductor, see 373s 'citation("Biobase")', and for packages 'citation("pkgname")'. 373s 373s 373s Attaching package: ‘Biobase’ 373s 373s The following object is masked from ‘package:MatrixGenerics’: 373s 373s rowMedians 373s 373s The following objects are masked from ‘package:matrixStats’: 373s 373s anyMissing, rowMedians 373s 376s Loading required package: Rsamtools 376s Loading required package: Biostrings 376s Loading required package: XVector 377s 377s Attaching package: ‘Biostrings’ 377s 377s The following object is masked from ‘package:base’: 377s 377s strsplit 377s 383s 383s Attaching package: ‘VariantAnnotation’ 383s 383s The following object is masked from ‘package:base’: 383s 383s tabulate 383s 383s > 383s > 383s Other tests are currently unsupported! 383s They will be progressively added. 383s autopkgtest [22:00:15]: test pkg-r-autopkgtest: -----------------------] 384s pkg-r-autopkgtest PASS 384s autopkgtest [22:00:16]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 384s autopkgtest [22:00:16]: @@@@@@@@@@@@@@@@@@@@ summary 384s pkg-r-autopkgtest PASS 396s Creating nova instance adt-noble-ppc64el-r-bioc-variantannotation-20240408-215352-juju-7f2275-prod-proposed-migration-environment-2-eeda7d0e-95bf-469a-a8ca-4399e0030470 from image adt/ubuntu-noble-ppc64el-server-20240408.img (UUID 798e375b-4b38-4d20-a5ce-c112b292d6b8)...