0s autopkgtest [17:48:40]: starting date and time: 2024-03-18 17:48:40+0000 0s autopkgtest [17:48:40]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [17:48:40]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1vv41k_4/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:xz-utils --apt-upgrade r-bioc-variantannotation --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=xz-utils/5.6.0-0.2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-4.secgroup --name adt-noble-ppc64el-r-bioc-variantannotation-20240318-174840-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 188s autopkgtest [17:51:48]: testbed dpkg architecture: ppc64el 188s autopkgtest [17:51:48]: testbed apt version: 2.7.12 188s autopkgtest [17:51:48]: @@@@@@@@@@@@@@@@@@@@ test bed setup 189s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 189s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [52.0 kB] 190s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 190s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [485 kB] 190s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3728 kB] 190s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 190s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 190s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 190s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 190s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [4009 kB] 190s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 190s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.4 kB] 190s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 194s Fetched 9103 kB in 2s (3683 kB/s) 194s Reading package lists... 197s Reading package lists... 198s Building dependency tree... 198s Reading state information... 198s Calculating upgrade... 198s The following packages will be upgraded: 198s liblzma5 xz-utils 198s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 198s Need to get 437 kB of archives. 198s After this operation, 88.1 kB disk space will be freed. 198s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el liblzma5 ppc64el 5.6.0-0.2 [156 kB] 199s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el xz-utils ppc64el 5.6.0-0.2 [281 kB] 199s Fetched 437 kB in 1s (593 kB/s) 200s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 200s Preparing to unpack .../liblzma5_5.6.0-0.2_ppc64el.deb ... 200s Unpacking liblzma5:ppc64el (5.6.0-0.2) over (5.4.5-0.3) ... 200s Setting up liblzma5:ppc64el (5.6.0-0.2) ... 200s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 200s Preparing to unpack .../xz-utils_5.6.0-0.2_ppc64el.deb ... 200s Unpacking xz-utils (5.6.0-0.2) over (5.4.5-0.3) ... 200s Setting up xz-utils (5.6.0-0.2) ... 200s Processing triggers for man-db (2.12.0-3) ... 200s Processing triggers for libc-bin (2.39-0ubuntu2) ... 201s Reading package lists... 201s Building dependency tree... 201s Reading state information... 201s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 202s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 202s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 202s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 202s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 203s Reading package lists... 203s Reading package lists... 204s Building dependency tree... 204s Reading state information... 204s Calculating upgrade... 204s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 204s Reading package lists... 204s Building dependency tree... 204s Reading state information... 205s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 208s autopkgtest [17:52:08]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 208s autopkgtest [17:52:08]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-variantannotation 211s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (dsc) [2587 B] 211s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (tar) [1887 kB] 211s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (diff) [7900 B] 211s gpgv: Signature made Fri Dec 1 09:59:29 2023 UTC 211s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 211s gpgv: issuer "tillea@rki.de" 211s gpgv: Can't check signature: No public key 211s dpkg-source: warning: cannot verify inline signature for ./r-bioc-variantannotation_1.48.1-1.dsc: no acceptable signature found 211s autopkgtest [17:52:11]: testing package r-bioc-variantannotation version 1.48.1-1 212s autopkgtest [17:52:12]: build not needed 218s autopkgtest [17:52:18]: test pkg-r-autopkgtest: preparing testbed 219s Reading package lists... 220s Building dependency tree... 220s Reading state information... 220s Starting pkgProblemResolver with broken count: 0 220s Starting 2 pkgProblemResolver with broken count: 0 220s Done 220s The following additional packages will be installed: 220s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 220s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 220s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 220s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 220s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 220s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 220s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 220s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 220s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 220s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 220s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 220s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 220s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 220s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 220s libjs-highlight.js libjs-jquery libjs-jquery-datatables 220s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 220s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 220s libjs-popper.js libjs-prettify libjs-sifter.js 220s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 220s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 220s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 220s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 220s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 220s libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev 220s libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 220s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 220s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 220s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 220s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 220s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 220s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 220s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 220s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 220s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 220s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 220s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 220s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 220s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 220s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 220s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 220s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 220s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 220s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 220s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 220s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 220s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 220s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 220s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 220s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 220s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 220s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 220s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 220s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 220s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 220s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 220s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 220s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 220s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 220s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 220s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 220s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 220s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 220s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 220s x11-common xdg-utils zip zlib1g-dev 220s Suggested packages: 220s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 220s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 220s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 220s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 220s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 220s libboost-context1.83-dev libboost-contract1.83-dev 220s libboost-coroutine1.83-dev libboost-date-time1.83-dev 220s libboost-exception1.83-dev libboost-fiber1.83-dev 220s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 220s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 220s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 220s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 220s libboost-numpy1.83-dev libboost-program-options1.83-dev 220s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 220s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 220s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 220s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 220s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 220s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 220s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 220s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 220s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 220s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 220s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 220s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 220s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-ensembldb 220s r-bioc-experimenthub r-bioc-all r-cran-testthat r-bioc-affy r-bioc-deseq2 220s r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 220s r-bioc-shortread r-cran-batchtools r-cran-data.table r-cran-mockery 220s r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 220s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-edger 220s r-bioc-annotationfilter r-cran-markdown r-bioc-gviz r-bioc-dexseq 220s r-bioc-sparsematrixstats r-bioc-limma r-cran-hexbin r-bioc-rhdf5 220s r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-kernsmooth r-cran-kernlab 220s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg r-cran-viridis 220s r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-magick r-cran-sf 220s r-cran-getopt r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 220s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 220s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-here 220s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper ghostscript 220s gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 220s texlive-latex-base-doc wp2latex 220s Recommended packages: 220s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 220s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-downlit 220s r-cran-rstudioapi r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte 220s r-cran-webshot r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery 220s r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench 220s r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr r-cran-spelling 220s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-future 220s w3m | www-browser r-cran-unitizer r-cran-rsvg r-cran-pkgload r-cran-hexbin 220s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 220s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 220s r-cran-vdiffr r-cran-waldo r-cran-cairo r-cran-markdown r-cran-jpeg 220s r-cran-readr r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate 220s r-cran-rgl r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 220s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-usethis 220s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 220s r-cran-dichromat r-cran-data.table r-cran-mockr r-cran-formattable 220s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 220s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 220s x11-xserver-utils 220s The following NEW packages will be installed: 220s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 220s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 220s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 220s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 220s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 220s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 220s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 220s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 220s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 220s libc6-dev libcairo2 libcc1-0 libcrypt-dev libdatrie1 libdeflate0 220s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 220s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 220s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 220s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 220s libjs-highlight.js libjs-jquery libjs-jquery-datatables 220s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 220s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 220s libjs-popper.js libjs-prettify libjs-sifter.js 220s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 220s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 220s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 220s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 220s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 220s libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-13-dev 220s libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 220s libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 220s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 220s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 220s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 220s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 220s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 220s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 220s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 220s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 220s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 220s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 220s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 220s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 220s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 220s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 220s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 220s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 220s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 220s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 220s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 220s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 220s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 220s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 220s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 220s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 220s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 220s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 220s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 220s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 220s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 220s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 220s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 220s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 220s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 220s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 220s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 220s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 220s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 220s x11-common xdg-utils zip zlib1g-dev 220s 0 upgraded, 299 newly installed, 0 to remove and 0 not upgraded. 220s Need to get 465 MB/465 MB of archives. 220s After this operation, 1460 MB of additional disk space will be used. 220s Get:1 /tmp/autopkgtest.Kyu5mv/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [776 B] 221s Get:2 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 221s Get:3 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 222s Get:4 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 222s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 223s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 223s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 223s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 225s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 226s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 226s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 232s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 232s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 232s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 232s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 232s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 232s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 232s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 232s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 233s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 233s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 234s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 234s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 234s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 235s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 238s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 238s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 238s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 238s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 238s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 239s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 239s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 239s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 239s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 239s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 239s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 239s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 239s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 239s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 239s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 239s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 240s Get:42 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 240s Get:43 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 240s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 240s Get:45 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 241s Get:46 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 241s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 242s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 242s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 242s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 242s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 242s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 242s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 242s Get:54 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 242s Get:55 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 242s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 242s Get:57 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 242s Get:58 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 244s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 244s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 244s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 244s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 244s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 244s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 244s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 244s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 244s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 244s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 244s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 244s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 244s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 244s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 246s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 246s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 246s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 246s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 246s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 246s Get:78 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 246s Get:79 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 246s Get:80 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 246s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 246s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 246s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 246s Get:84 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 246s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 246s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 246s Get:87 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 246s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 246s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 246s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 246s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 246s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 246s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 246s Get:94 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 246s Get:95 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 247s Get:96 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 248s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 248s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 248s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 248s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 248s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 248s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 249s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 249s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 249s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 249s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 249s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 249s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 249s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 249s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 249s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 249s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 249s Get:113 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 249s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 249s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 249s Get:116 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 249s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 249s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 249s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 250s Get:120 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 250s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 250s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 250s Get:123 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 250s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 250s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 250s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 250s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 250s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 250s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 250s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 250s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 250s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 250s Get:133 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 250s Get:134 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 250s Get:135 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 250s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 250s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 250s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 252s Get:139 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 252s Get:140 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 252s Get:141 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 252s Get:142 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 252s Get:143 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 252s Get:144 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 252s Get:145 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 253s Get:146 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el liblzma-dev ppc64el 5.6.0-0.2 [208 kB] 253s Get:147 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 253s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 253s Get:149 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 254s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 254s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 254s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 254s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 254s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 254s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 254s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 254s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 254s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 254s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 254s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 255s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 255s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 255s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 255s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 255s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 255s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 255s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 255s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 255s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 255s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 255s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 255s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 255s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 255s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 255s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 255s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 255s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 255s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 255s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 255s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 255s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 255s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 256s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 257s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 257s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 258s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 258s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 258s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 258s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 258s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 259s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 259s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 259s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 259s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 259s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 259s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 259s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 259s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 259s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 259s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 259s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 259s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 259s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 259s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 260s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocversion all 3.18.1-1 [11.0 kB] 260s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 260s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 260s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 260s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 260s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 260s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 260s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 260s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 260s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 260s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 260s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 260s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 260s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 260s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 261s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 261s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 261s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 261s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 261s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 261s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 261s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 261s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 262s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 262s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 262s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 262s Get:231 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 262s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 262s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 262s Get:234 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 262s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 262s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 262s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB] 262s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 262s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dt all 0.31+dfsg-1 [265 kB] 262s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 262s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 262s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 262s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 262s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 262s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 262s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 262s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 262s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 262s Get:249 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 262s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 262s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 262s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 262s Get:253 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 262s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 263s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 264s Get:256 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 264s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 268s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 268s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 268s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 268s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 268s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 268s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 268s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 268s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 268s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 268s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1 [3801 kB] 269s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 269s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 269s Get:270 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 269s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 269s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 269s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 270s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 270s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 270s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 270s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 271s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 271s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 271s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 271s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 271s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 272s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 272s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-snpstats ppc64el 1.52.0+dfsg-1 [7274 kB] 273s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-variantannotation ppc64el 1.48.1-1 [3649 kB] 274s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 274s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 274s Get:288 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 274s Get:289 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 274s Get:290 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 274s Get:291 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 275s Get:292 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 275s Get:293 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 275s Get:294 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 275s Get:295 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 275s Get:296 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 275s Get:297 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 275s Get:298 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 276s Get:299 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 277s Preconfiguring packages ... 277s Fetched 465 MB in 55s (8398 kB/s) 277s Selecting previously unselected package libc-dev-bin. 277s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70035 files and directories currently installed.) 277s Preparing to unpack .../000-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 277s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 277s Selecting previously unselected package linux-libc-dev:ppc64el. 277s Preparing to unpack .../001-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 277s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 277s Selecting previously unselected package libcrypt-dev:ppc64el. 277s Preparing to unpack .../002-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 277s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 277s Selecting previously unselected package libtirpc-dev:ppc64el. 277s Preparing to unpack .../003-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 277s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 277s Selecting previously unselected package libnsl-dev:ppc64el. 277s Preparing to unpack .../004-libnsl-dev_1.3.0-3_ppc64el.deb ... 277s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 277s Selecting previously unselected package rpcsvc-proto. 277s Preparing to unpack .../005-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 277s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 277s Selecting previously unselected package libc6-dev:ppc64el. 277s Preparing to unpack .../006-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 277s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 277s Selecting previously unselected package libisl23:ppc64el. 277s Preparing to unpack .../007-libisl23_0.26-3_ppc64el.deb ... 277s Unpacking libisl23:ppc64el (0.26-3) ... 277s Selecting previously unselected package libmpc3:ppc64el. 277s Preparing to unpack .../008-libmpc3_1.3.1-1_ppc64el.deb ... 277s Unpacking libmpc3:ppc64el (1.3.1-1) ... 277s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 277s Preparing to unpack .../009-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 277s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 278s Selecting previously unselected package cpp-13. 278s Preparing to unpack .../010-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 278s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 278s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 278s Preparing to unpack .../011-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 278s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 278s Selecting previously unselected package cpp. 278s Preparing to unpack .../012-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 278s Unpacking cpp (4:13.2.0-7ubuntu1) ... 278s Selecting previously unselected package libcc1-0:ppc64el. 278s Preparing to unpack .../013-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libgomp1:ppc64el. 278s Preparing to unpack .../014-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libitm1:ppc64el. 278s Preparing to unpack .../015-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libatomic1:ppc64el. 278s Preparing to unpack .../016-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libasan8:ppc64el. 278s Preparing to unpack .../017-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package liblsan0:ppc64el. 278s Preparing to unpack .../018-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libtsan2:ppc64el. 278s Preparing to unpack .../019-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libubsan1:ppc64el. 278s Preparing to unpack .../020-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libquadmath0:ppc64el. 278s Preparing to unpack .../021-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 278s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 278s Selecting previously unselected package libgcc-13-dev:ppc64el. 278s Preparing to unpack .../022-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 278s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 278s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 278s Preparing to unpack .../023-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 278s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package gcc-13. 279s Preparing to unpack .../024-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 279s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 279s Preparing to unpack .../025-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 279s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 279s Selecting previously unselected package gcc. 279s Preparing to unpack .../026-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 279s Unpacking gcc (4:13.2.0-7ubuntu1) ... 279s Selecting previously unselected package libstdc++-13-dev:ppc64el. 279s Preparing to unpack .../027-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 279s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 279s Preparing to unpack .../028-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 279s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package g++-13. 279s Preparing to unpack .../029-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 279s Unpacking g++-13 (13.2.0-17ubuntu2) ... 279s Selecting previously unselected package g++-powerpc64le-linux-gnu. 279s Preparing to unpack .../030-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 279s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 279s Selecting previously unselected package g++. 279s Preparing to unpack .../031-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 279s Unpacking g++ (4:13.2.0-7ubuntu1) ... 279s Selecting previously unselected package build-essential. 279s Preparing to unpack .../032-build-essential_12.10ubuntu1_ppc64el.deb ... 279s Unpacking build-essential (12.10ubuntu1) ... 279s Selecting previously unselected package dctrl-tools. 279s Preparing to unpack .../033-dctrl-tools_2.24-3build2_ppc64el.deb ... 279s Unpacking dctrl-tools (2.24-3build2) ... 279s Selecting previously unselected package fonts-dejavu-mono. 279s Preparing to unpack .../034-fonts-dejavu-mono_2.37-8_all.deb ... 279s Unpacking fonts-dejavu-mono (2.37-8) ... 279s Selecting previously unselected package fonts-dejavu-core. 279s Preparing to unpack .../035-fonts-dejavu-core_2.37-8_all.deb ... 279s Unpacking fonts-dejavu-core (2.37-8) ... 279s Selecting previously unselected package fontconfig-config. 279s Preparing to unpack .../036-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 280s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 280s Selecting previously unselected package libfontconfig1:ppc64el. 280s Preparing to unpack .../037-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 280s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 280s Selecting previously unselected package fontconfig. 280s Preparing to unpack .../038-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 280s Unpacking fontconfig (2.15.0-1ubuntu1) ... 280s Selecting previously unselected package fonts-font-awesome. 280s Preparing to unpack .../039-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 280s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 280s Selecting previously unselected package fonts-glyphicons-halflings. 280s Preparing to unpack .../040-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 280s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 280s Selecting previously unselected package fonts-lmodern. 280s Preparing to unpack .../041-fonts-lmodern_2.005-1_all.deb ... 280s Unpacking fonts-lmodern (2.005-1) ... 280s Selecting previously unselected package fonts-mathjax. 280s Preparing to unpack .../042-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 280s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 280s Selecting previously unselected package libgfortran5:ppc64el. 280s Preparing to unpack .../043-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 280s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 280s Selecting previously unselected package libgfortran-13-dev:ppc64el. 280s Preparing to unpack .../044-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 280s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 280s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 280s Preparing to unpack .../045-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 280s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 280s Selecting previously unselected package gfortran-13. 280s Preparing to unpack .../046-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 281s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 281s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 281s Preparing to unpack .../047-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 281s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 281s Selecting previously unselected package gfortran. 281s Preparing to unpack .../048-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 281s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 281s Selecting previously unselected package icu-devtools. 281s Preparing to unpack .../049-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 281s Unpacking icu-devtools (74.2-1ubuntu1) ... 281s Selecting previously unselected package javascript-common. 281s Preparing to unpack .../050-javascript-common_11+nmu1_all.deb ... 281s Unpacking javascript-common (11+nmu1) ... 281s Selecting previously unselected package libio-string-perl. 281s Preparing to unpack .../051-libio-string-perl_1.08-4_all.deb ... 281s Unpacking libio-string-perl (1.08-4) ... 281s Selecting previously unselected package liblatex-tounicode-perl. 281s Preparing to unpack .../052-liblatex-tounicode-perl_0.54-2_all.deb ... 281s Unpacking liblatex-tounicode-perl (0.54-2) ... 281s Selecting previously unselected package libbibtex-parser-perl. 281s Preparing to unpack .../053-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 281s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 281s Selecting previously unselected package libblas3:ppc64el. 281s Preparing to unpack .../054-libblas3_3.12.0-3_ppc64el.deb ... 281s Unpacking libblas3:ppc64el (3.12.0-3) ... 281s Selecting previously unselected package libblas-dev:ppc64el. 281s Preparing to unpack .../055-libblas-dev_3.12.0-3_ppc64el.deb ... 281s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 281s Selecting previously unselected package libboost1.83-dev:ppc64el. 281s Preparing to unpack .../056-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 281s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 284s Selecting previously unselected package libboost-dev:ppc64el. 284s Preparing to unpack .../057-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 284s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 284s Selecting previously unselected package libbz2-dev:ppc64el. 284s Preparing to unpack .../058-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 284s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 284s Selecting previously unselected package libpixman-1-0:ppc64el. 284s Preparing to unpack .../059-libpixman-1-0_0.42.2-1_ppc64el.deb ... 284s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 284s Selecting previously unselected package libxcb-render0:ppc64el. 284s Preparing to unpack .../060-libxcb-render0_1.15-1_ppc64el.deb ... 284s Unpacking libxcb-render0:ppc64el (1.15-1) ... 284s Selecting previously unselected package libxcb-shm0:ppc64el. 284s Preparing to unpack .../061-libxcb-shm0_1.15-1_ppc64el.deb ... 284s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 284s Selecting previously unselected package libxrender1:ppc64el. 284s Preparing to unpack .../062-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 284s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 284s Selecting previously unselected package libcairo2:ppc64el. 284s Preparing to unpack .../063-libcairo2_1.18.0-1_ppc64el.deb ... 284s Unpacking libcairo2:ppc64el (1.18.0-1) ... 284s Selecting previously unselected package libdatrie1:ppc64el. 284s Preparing to unpack .../064-libdatrie1_0.2.13-3_ppc64el.deb ... 284s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 284s Selecting previously unselected package libdeflate0:ppc64el. 284s Preparing to unpack .../065-libdeflate0_1.19-1_ppc64el.deb ... 284s Unpacking libdeflate0:ppc64el (1.19-1) ... 284s Selecting previously unselected package libgraphite2-3:ppc64el. 284s Preparing to unpack .../066-libgraphite2-3_1.3.14-2_ppc64el.deb ... 284s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 284s Selecting previously unselected package libharfbuzz0b:ppc64el. 284s Preparing to unpack .../067-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 284s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 284s Selecting previously unselected package x11-common. 284s Preparing to unpack .../068-x11-common_1%3a7.7+23ubuntu2_all.deb ... 284s Unpacking x11-common (1:7.7+23ubuntu2) ... 284s Selecting previously unselected package libice6:ppc64el. 284s Preparing to unpack .../069-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 284s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 284s Selecting previously unselected package libicu-dev:ppc64el. 284s Preparing to unpack .../070-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 284s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 284s Selecting previously unselected package libjpeg-turbo8:ppc64el. 284s Preparing to unpack .../071-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb ... 284s Unpacking libjpeg-turbo8:ppc64el (2.1.5-2ubuntu1) ... 284s Selecting previously unselected package libjpeg-turbo8-dev:ppc64el. 284s Preparing to unpack .../072-libjpeg-turbo8-dev_2.1.5-2ubuntu1_ppc64el.deb ... 284s Unpacking libjpeg-turbo8-dev:ppc64el (2.1.5-2ubuntu1) ... 284s Selecting previously unselected package libjpeg8:ppc64el. 284s Preparing to unpack .../073-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 284s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 285s Selecting previously unselected package libjpeg8-dev:ppc64el. 285s Preparing to unpack .../074-libjpeg8-dev_8c-2ubuntu11_ppc64el.deb ... 285s Unpacking libjpeg8-dev:ppc64el (8c-2ubuntu11) ... 285s Selecting previously unselected package libjpeg-dev:ppc64el. 285s Preparing to unpack .../075-libjpeg-dev_8c-2ubuntu11_ppc64el.deb ... 285s Unpacking libjpeg-dev:ppc64el (8c-2ubuntu11) ... 285s Selecting previously unselected package libjs-bootstrap. 285s Preparing to unpack .../076-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 285s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 285s Selecting previously unselected package libjs-popper.js. 285s Preparing to unpack .../077-libjs-popper.js_1.16.1+ds-6_all.deb ... 285s Unpacking libjs-popper.js (1.16.1+ds-6) ... 285s Selecting previously unselected package libjs-bootstrap4. 285s Preparing to unpack .../078-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 285s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 285s Selecting previously unselected package libjs-d3. 285s Preparing to unpack .../079-libjs-d3_3.5.17-4_all.deb ... 285s Unpacking libjs-d3 (3.5.17-4) ... 285s Selecting previously unselected package libjs-es5-shim. 285s Preparing to unpack .../080-libjs-es5-shim_4.6.7-2_all.deb ... 285s Unpacking libjs-es5-shim (4.6.7-2) ... 285s Selecting previously unselected package libjs-highlight.js. 285s Preparing to unpack .../081-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 285s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 285s Selecting previously unselected package libjs-jquery. 285s Preparing to unpack .../082-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 285s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 285s Selecting previously unselected package libjs-jquery-datatables. 285s Preparing to unpack .../083-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 285s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 285s Selecting previously unselected package libjs-jquery-datatables-extensions. 285s Preparing to unpack .../084-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 285s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 285s Selecting previously unselected package libjs-sifter.js. 285s Preparing to unpack .../085-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 285s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 285s Selecting previously unselected package libjs-microplugin.js. 285s Preparing to unpack .../086-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 285s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 285s Selecting previously unselected package libjs-jquery-selectize.js. 285s Preparing to unpack .../087-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 285s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 285s Selecting previously unselected package libjs-jquery-ui. 285s Preparing to unpack .../088-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 285s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 288s Selecting previously unselected package libjs-json. 289s Preparing to unpack .../089-libjs-json_0~20221030+~1.0.8-1_all.deb ... 289s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 289s Selecting previously unselected package libjs-lunr. 289s Preparing to unpack .../090-libjs-lunr_2.3.9~dfsg-2_all.deb ... 289s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 289s Selecting previously unselected package libjs-prettify. 289s Preparing to unpack .../091-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 289s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 289s Selecting previously unselected package libkpathsea6:ppc64el. 289s Preparing to unpack .../092-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 289s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 289s Selecting previously unselected package liblapack3:ppc64el. 289s Preparing to unpack .../093-liblapack3_3.12.0-3_ppc64el.deb ... 289s Unpacking liblapack3:ppc64el (3.12.0-3) ... 289s Selecting previously unselected package liblapack-dev:ppc64el. 289s Preparing to unpack .../094-liblapack-dev_3.12.0-3_ppc64el.deb ... 289s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 289s Selecting previously unselected package liblerc4:ppc64el. 289s Preparing to unpack .../095-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 289s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 289s Selecting previously unselected package libncurses-dev:ppc64el. 289s Preparing to unpack .../096-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 289s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 289s Selecting previously unselected package libthai-data. 289s Preparing to unpack .../097-libthai-data_0.1.29-2_all.deb ... 289s Unpacking libthai-data (0.1.29-2) ... 289s Selecting previously unselected package libthai0:ppc64el. 289s Preparing to unpack .../098-libthai0_0.1.29-2_ppc64el.deb ... 289s Unpacking libthai0:ppc64el (0.1.29-2) ... 289s Selecting previously unselected package libpango-1.0-0:ppc64el. 289s Preparing to unpack .../099-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 289s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 289s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 289s Preparing to unpack .../100-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 289s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 289s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 289s Preparing to unpack .../101-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 289s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 289s Selecting previously unselected package libpaper1:ppc64el. 289s Preparing to unpack .../102-libpaper1_1.1.29_ppc64el.deb ... 289s Unpacking libpaper1:ppc64el (1.1.29) ... 289s Selecting previously unselected package libpaper-utils. 289s Preparing to unpack .../103-libpaper-utils_1.1.29_ppc64el.deb ... 289s Unpacking libpaper-utils (1.1.29) ... 289s Selecting previously unselected package libpcre2-16-0:ppc64el. 289s Preparing to unpack .../104-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 289s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 289s Selecting previously unselected package libpcre2-32-0:ppc64el. 289s Preparing to unpack .../105-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 289s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 289s Selecting previously unselected package libpcre2-posix3:ppc64el. 289s Preparing to unpack .../106-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 289s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 289s Selecting previously unselected package libpcre2-dev:ppc64el. 289s Preparing to unpack .../107-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 289s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 289s Selecting previously unselected package libpkgconf3:ppc64el. 289s Preparing to unpack .../108-libpkgconf3_1.8.1-2_ppc64el.deb ... 289s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 289s Selecting previously unselected package zlib1g-dev:ppc64el. 289s Preparing to unpack .../109-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 289s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 289s Selecting previously unselected package libpng-dev:ppc64el. 289s Preparing to unpack .../110-libpng-dev_1.6.43-1_ppc64el.deb ... 289s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 289s Selecting previously unselected package libpotrace0:ppc64el. 289s Preparing to unpack .../111-libpotrace0_1.16-2_ppc64el.deb ... 289s Unpacking libpotrace0:ppc64el (1.16-2) ... 289s Selecting previously unselected package libptexenc1:ppc64el. 289s Preparing to unpack .../112-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 289s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 289s Selecting previously unselected package libreadline-dev:ppc64el. 289s Preparing to unpack .../113-libreadline-dev_8.2-3_ppc64el.deb ... 289s Unpacking libreadline-dev:ppc64el (8.2-3) ... 289s Selecting previously unselected package libsharpyuv0:ppc64el. 289s Preparing to unpack .../114-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 289s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 289s Selecting previously unselected package libsm6:ppc64el. 289s Preparing to unpack .../115-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 289s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 289s Selecting previously unselected package libsynctex2:ppc64el. 289s Preparing to unpack .../116-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 289s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 289s Selecting previously unselected package libtcl8.6:ppc64el. 289s Preparing to unpack .../117-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 289s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 289s Selecting previously unselected package libteckit0:ppc64el. 289s Preparing to unpack .../118-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 289s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 289s Selecting previously unselected package libtexlua53-5:ppc64el. 289s Preparing to unpack .../119-libtexlua53-5_2023.20230311.66589-9_ppc64el.deb ... 289s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9) ... 289s Selecting previously unselected package libjbig0:ppc64el. 289s Preparing to unpack .../120-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 289s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 289s Selecting previously unselected package libwebp7:ppc64el. 289s Preparing to unpack .../121-libwebp7_1.3.2-0.4_ppc64el.deb ... 289s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 289s Selecting previously unselected package libtiff6:ppc64el. 289s Preparing to unpack .../122-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 289s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 289s Selecting previously unselected package libxft2:ppc64el. 289s Preparing to unpack .../123-libxft2_2.3.6-1_ppc64el.deb ... 289s Unpacking libxft2:ppc64el (2.3.6-1) ... 289s Selecting previously unselected package libxss1:ppc64el. 289s Preparing to unpack .../124-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 289s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 289s Selecting previously unselected package libtk8.6:ppc64el. 289s Preparing to unpack .../125-libtk8.6_8.6.13-2_ppc64el.deb ... 289s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 289s Selecting previously unselected package libxt6:ppc64el. 289s Preparing to unpack .../126-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 289s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 289s Selecting previously unselected package libxmu6:ppc64el. 289s Preparing to unpack .../127-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 289s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 289s Selecting previously unselected package libxpm4:ppc64el. 289s Preparing to unpack .../128-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 289s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 289s Selecting previously unselected package libxaw7:ppc64el. 289s Preparing to unpack .../129-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 289s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 289s Selecting previously unselected package libxi6:ppc64el. 289s Preparing to unpack .../130-libxi6_2%3a1.8.1-1_ppc64el.deb ... 289s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 289s Selecting previously unselected package libzzip-0-13:ppc64el. 289s Preparing to unpack .../131-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 289s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 289s Selecting previously unselected package node-bootstrap-sass. 289s Preparing to unpack .../132-node-bootstrap-sass_3.4.3-2_all.deb ... 289s Unpacking node-bootstrap-sass (3.4.3-2) ... 289s Selecting previously unselected package node-html5shiv. 289s Preparing to unpack .../133-node-html5shiv_3.7.3+dfsg-5_all.deb ... 289s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 289s Selecting previously unselected package node-normalize.css. 289s Preparing to unpack .../134-node-normalize.css_8.0.1-5_all.deb ... 289s Unpacking node-normalize.css (8.0.1-5) ... 289s Selecting previously unselected package pandoc-data. 289s Preparing to unpack .../135-pandoc-data_3.1.3-1_all.deb ... 289s Unpacking pandoc-data (3.1.3-1) ... 289s Selecting previously unselected package pandoc. 289s Preparing to unpack .../136-pandoc_3.1.3+ds-2_ppc64el.deb ... 289s Unpacking pandoc (3.1.3+ds-2) ... 289s Selecting previously unselected package pkgconf-bin. 289s Preparing to unpack .../137-pkgconf-bin_1.8.1-2_ppc64el.deb ... 289s Unpacking pkgconf-bin (1.8.1-2) ... 289s Selecting previously unselected package pkgconf:ppc64el. 289s Preparing to unpack .../138-pkgconf_1.8.1-2_ppc64el.deb ... 289s Unpacking pkgconf:ppc64el (1.8.1-2) ... 289s Selecting previously unselected package pkg-config:ppc64el. 289s Preparing to unpack .../139-pkg-config_1.8.1-2_ppc64el.deb ... 289s Unpacking pkg-config:ppc64el (1.8.1-2) ... 289s Selecting previously unselected package zip. 289s Preparing to unpack .../140-zip_3.0-13_ppc64el.deb ... 289s Unpacking zip (3.0-13) ... 289s Selecting previously unselected package unzip. 289s Preparing to unpack .../141-unzip_6.0-28ubuntu3_ppc64el.deb ... 289s Unpacking unzip (6.0-28ubuntu3) ... 289s Selecting previously unselected package xdg-utils. 289s Preparing to unpack .../142-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 289s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 289s Selecting previously unselected package r-base-core. 289s Preparing to unpack .../143-r-base-core_4.3.2-1build1_ppc64el.deb ... 289s Unpacking r-base-core (4.3.2-1build1) ... 289s Selecting previously unselected package liblzma-dev:ppc64el. 289s Preparing to unpack .../144-liblzma-dev_5.6.0-0.2_ppc64el.deb ... 289s Unpacking liblzma-dev:ppc64el (5.6.0-0.2) ... 289s Selecting previously unselected package r-base-dev. 289s Preparing to unpack .../145-r-base-dev_4.3.2-1build1_all.deb ... 289s Unpacking r-base-dev (4.3.2-1build1) ... 289s Selecting previously unselected package pkg-r-autopkgtest. 289s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 289s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 289s Selecting previously unselected package r-bioc-biocgenerics. 289s Preparing to unpack .../147-r-bioc-biocgenerics_0.48.1-2_all.deb ... 289s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 289s Selecting previously unselected package r-bioc-biobase. 289s Preparing to unpack .../148-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 289s Unpacking r-bioc-biobase (2.62.0-1) ... 289s Selecting previously unselected package r-bioc-s4vectors. 289s Preparing to unpack .../149-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 289s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 289s Selecting previously unselected package r-bioc-iranges. 289s Preparing to unpack .../150-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 289s Unpacking r-bioc-iranges (2.36.0-1) ... 289s Selecting previously unselected package r-cran-dbi. 289s Preparing to unpack .../151-r-cran-dbi_1.2.2-1_all.deb ... 289s Unpacking r-cran-dbi (1.2.2-1) ... 289s Selecting previously unselected package r-cran-bit. 289s Preparing to unpack .../152-r-cran-bit_4.0.5-1_ppc64el.deb ... 289s Unpacking r-cran-bit (4.0.5-1) ... 289s Selecting previously unselected package r-cran-bit64. 289s Preparing to unpack .../153-r-cran-bit64_4.0.5-1_ppc64el.deb ... 289s Unpacking r-cran-bit64 (4.0.5-1) ... 289s Selecting previously unselected package r-cran-rlang. 289s Preparing to unpack .../154-r-cran-rlang_1.1.3-1_ppc64el.deb ... 289s Unpacking r-cran-rlang (1.1.3-1) ... 289s Selecting previously unselected package r-cran-cli. 289s Preparing to unpack .../155-r-cran-cli_3.6.2-1_ppc64el.deb ... 289s Unpacking r-cran-cli (3.6.2-1) ... 289s Selecting previously unselected package r-cran-glue. 289s Preparing to unpack .../156-r-cran-glue_1.7.0-1_ppc64el.deb ... 289s Unpacking r-cran-glue (1.7.0-1) ... 289s Selecting previously unselected package r-cran-lifecycle. 289s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 289s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 289s Selecting previously unselected package r-cran-vctrs. 289s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 289s Unpacking r-cran-vctrs (0.6.5-1) ... 289s Selecting previously unselected package r-cran-blob. 289s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 289s Unpacking r-cran-blob (1.2.4-1) ... 289s Selecting previously unselected package r-cran-fastmap. 289s Preparing to unpack .../160-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 289s Unpacking r-cran-fastmap (1.1.1-1) ... 289s Selecting previously unselected package r-cran-cachem. 289s Preparing to unpack .../161-r-cran-cachem_1.0.8-1_ppc64el.deb ... 289s Unpacking r-cran-cachem (1.0.8-1) ... 289s Selecting previously unselected package r-cran-memoise. 289s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 289s Unpacking r-cran-memoise (2.0.1-1) ... 289s Selecting previously unselected package r-cran-pkgconfig. 289s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 289s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 289s Selecting previously unselected package r-cran-plogr. 289s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 289s Unpacking r-cran-plogr (0.2.0-3build1) ... 289s Selecting previously unselected package r-cran-cpp11. 289s Preparing to unpack .../165-r-cran-cpp11_0.4.7-1_all.deb ... 289s Unpacking r-cran-cpp11 (0.4.7-1) ... 289s Selecting previously unselected package r-cran-rsqlite. 289s Preparing to unpack .../166-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 289s Unpacking r-cran-rsqlite (2.3.4-1) ... 289s Selecting previously unselected package r-cran-curl. 289s Preparing to unpack .../167-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 289s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 289s Selecting previously unselected package r-cran-jsonlite. 289s Preparing to unpack .../168-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 289s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 289s Selecting previously unselected package r-cran-mime. 289s Preparing to unpack .../169-r-cran-mime_0.12-1_ppc64el.deb ... 289s Unpacking r-cran-mime (0.12-1) ... 290s Selecting previously unselected package r-cran-sys. 290s Preparing to unpack .../170-r-cran-sys_3.4.2-1_ppc64el.deb ... 290s Unpacking r-cran-sys (3.4.2-1) ... 290s Selecting previously unselected package r-cran-askpass. 290s Preparing to unpack .../171-r-cran-askpass_1.2.0-1_ppc64el.deb ... 290s Unpacking r-cran-askpass (1.2.0-1) ... 290s Selecting previously unselected package r-cran-openssl. 290s Preparing to unpack .../172-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 290s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 290s Selecting previously unselected package r-cran-r6. 290s Preparing to unpack .../173-r-cran-r6_2.5.1-1_all.deb ... 290s Unpacking r-cran-r6 (2.5.1-1) ... 290s Selecting previously unselected package r-cran-httr. 290s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 290s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 290s Selecting previously unselected package r-cran-png. 290s Preparing to unpack .../175-r-cran-png_0.1-8-1_ppc64el.deb ... 290s Unpacking r-cran-png (0.1-8-1) ... 290s Selecting previously unselected package r-bioc-zlibbioc. 290s Preparing to unpack .../176-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 290s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 290s Selecting previously unselected package r-bioc-xvector. 290s Preparing to unpack .../177-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 290s Unpacking r-bioc-xvector (0.42.0-1) ... 290s Selecting previously unselected package r-cran-bitops. 290s Preparing to unpack .../178-r-cran-bitops_1.0-7-1_ppc64el.deb ... 290s Unpacking r-cran-bitops (1.0-7-1) ... 290s Selecting previously unselected package r-cran-rcurl. 290s Preparing to unpack .../179-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 290s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 290s Selecting previously unselected package r-bioc-genomeinfodbdata. 290s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 290s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 290s Selecting previously unselected package r-bioc-genomeinfodb. 290s Preparing to unpack .../181-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 290s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 290s Selecting previously unselected package r-cran-crayon. 290s Preparing to unpack .../182-r-cran-crayon_1.5.2-1_all.deb ... 290s Unpacking r-cran-crayon (1.5.2-1) ... 290s Selecting previously unselected package r-bioc-biostrings. 290s Preparing to unpack .../183-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 290s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 290s Selecting previously unselected package r-bioc-keggrest. 290s Preparing to unpack .../184-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 290s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 290s Selecting previously unselected package r-bioc-annotationdbi. 290s Preparing to unpack .../185-r-bioc-annotationdbi_1.64.1-1_all.deb ... 290s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 290s Selecting previously unselected package r-cran-generics. 290s Preparing to unpack .../186-r-cran-generics_0.1.3-1_all.deb ... 290s Unpacking r-cran-generics (0.1.3-1) ... 290s Selecting previously unselected package r-cran-magrittr. 290s Preparing to unpack .../187-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 290s Unpacking r-cran-magrittr (2.0.3-1) ... 290s Selecting previously unselected package r-cran-fansi. 290s Preparing to unpack .../188-r-cran-fansi_1.0.5-1_ppc64el.deb ... 290s Unpacking r-cran-fansi (1.0.5-1) ... 290s Selecting previously unselected package r-cran-utf8. 290s Preparing to unpack .../189-r-cran-utf8_1.2.4-1_ppc64el.deb ... 290s Unpacking r-cran-utf8 (1.2.4-1) ... 290s Selecting previously unselected package r-cran-pillar. 290s Preparing to unpack .../190-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 290s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 290s Selecting previously unselected package r-cran-tibble. 290s Preparing to unpack .../191-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 290s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 291s Selecting previously unselected package r-cran-withr. 291s Preparing to unpack .../192-r-cran-withr_2.5.0-1_all.deb ... 291s Unpacking r-cran-withr (2.5.0-1) ... 291s Selecting previously unselected package r-cran-tidyselect. 291s Preparing to unpack .../193-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 291s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 291s Selecting previously unselected package r-cran-dplyr. 291s Preparing to unpack .../194-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 291s Unpacking r-cran-dplyr (1.1.4-1) ... 291s Selecting previously unselected package r-cran-purrr. 291s Preparing to unpack .../195-r-cran-purrr_1.0.2-1_ppc64el.deb ... 291s Unpacking r-cran-purrr (1.0.2-1) ... 291s Selecting previously unselected package r-cran-stringi. 291s Preparing to unpack .../196-r-cran-stringi_1.8.3-1_ppc64el.deb ... 291s Unpacking r-cran-stringi (1.8.3-1) ... 291s Selecting previously unselected package r-cran-stringr. 291s Preparing to unpack .../197-r-cran-stringr_1.5.1-1_all.deb ... 291s Unpacking r-cran-stringr (1.5.1-1) ... 291s Selecting previously unselected package r-cran-tidyr. 291s Preparing to unpack .../198-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 291s Unpacking r-cran-tidyr (1.3.1-1) ... 291s Selecting previously unselected package r-cran-dbplyr. 291s Preparing to unpack .../199-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 291s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 291s Selecting previously unselected package r-cran-filelock. 291s Preparing to unpack .../200-r-cran-filelock_1.0.3-1_ppc64el.deb ... 291s Unpacking r-cran-filelock (1.0.3-1) ... 291s Selecting previously unselected package r-bioc-biocfilecache. 291s Preparing to unpack .../201-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 291s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 291s Selecting previously unselected package r-cran-biocmanager. 291s Preparing to unpack .../202-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 291s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 291s Selecting previously unselected package r-bioc-biocversion. 291s Preparing to unpack .../203-r-bioc-biocversion_3.18.1-1_all.deb ... 291s Unpacking r-bioc-biocversion (3.18.1-1) ... 291s Selecting previously unselected package r-cran-rappdirs. 291s Preparing to unpack .../204-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 291s Unpacking r-cran-rappdirs (0.3.3-1) ... 291s Selecting previously unselected package r-cran-yaml. 291s Preparing to unpack .../205-r-cran-yaml_2.3.8-1_ppc64el.deb ... 291s Unpacking r-cran-yaml (2.3.8-1) ... 291s Selecting previously unselected package r-cran-littler. 291s Preparing to unpack .../206-r-cran-littler_0.3.19-1_ppc64el.deb ... 291s Unpacking r-cran-littler (0.3.19-1) ... 291s Selecting previously unselected package r-cran-pkgkitten. 291s Preparing to unpack .../207-r-cran-pkgkitten_0.2.3-1_all.deb ... 291s Unpacking r-cran-pkgkitten (0.2.3-1) ... 291s Selecting previously unselected package r-cran-rcpp. 291s Preparing to unpack .../208-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 291s Unpacking r-cran-rcpp (1.0.12-1) ... 291s Selecting previously unselected package r-cran-later. 291s Preparing to unpack .../209-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 291s Unpacking r-cran-later (1.3.2+dfsg-1) ... 291s Selecting previously unselected package r-cran-promises. 291s Preparing to unpack .../210-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 291s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 291s Selecting previously unselected package r-cran-httpuv. 291s Preparing to unpack .../211-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 291s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 291s Selecting previously unselected package r-cran-xtable. 291s Preparing to unpack .../212-r-cran-xtable_1%3a1.8-4-2_all.deb ... 291s Unpacking r-cran-xtable (1:1.8-4-2) ... 291s Selecting previously unselected package r-cran-base64enc. 291s Preparing to unpack .../213-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 291s Unpacking r-cran-base64enc (0.1-3-3) ... 292s Selecting previously unselected package r-cran-digest. 292s Preparing to unpack .../214-r-cran-digest_0.6.34-1_ppc64el.deb ... 292s Unpacking r-cran-digest (0.6.34-1) ... 292s Selecting previously unselected package r-cran-ellipsis. 292s Preparing to unpack .../215-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 292s Unpacking r-cran-ellipsis (0.3.2-2) ... 292s Selecting previously unselected package r-cran-htmltools. 292s Preparing to unpack .../216-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 292s Unpacking r-cran-htmltools (0.5.7-1) ... 292s Selecting previously unselected package r-cran-fontawesome. 292s Preparing to unpack .../217-r-cran-fontawesome_0.5.2-1_all.deb ... 292s Unpacking r-cran-fontawesome (0.5.2-1) ... 292s Selecting previously unselected package r-cran-sourcetools. 292s Preparing to unpack .../218-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 292s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 292s Selecting previously unselected package r-cran-commonmark. 292s Preparing to unpack .../219-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 292s Unpacking r-cran-commonmark (1.9.1-1) ... 292s Selecting previously unselected package r-cran-jquerylib. 292s Preparing to unpack .../220-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 292s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 292s Selecting previously unselected package r-cran-fs. 292s Preparing to unpack .../221-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 292s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 292s Selecting previously unselected package r-cran-sass. 292s Preparing to unpack .../222-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 292s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 292s Selecting previously unselected package r-cran-bslib. 292s Preparing to unpack .../223-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 292s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 292s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 292s Preparing to unpack .../224-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 292s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 292s Selecting previously unselected package r-cran-shiny. 292s Preparing to unpack .../225-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 292s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 292s Selecting previously unselected package r-cran-evaluate. 292s Preparing to unpack .../226-r-cran-evaluate_0.23-1_all.deb ... 292s Unpacking r-cran-evaluate (0.23-1) ... 292s Selecting previously unselected package r-cran-xfun. 292s Preparing to unpack .../227-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 292s Unpacking r-cran-xfun (0.41+dfsg-1) ... 292s Selecting previously unselected package r-cran-highr. 292s Preparing to unpack .../228-r-cran-highr_0.10+dfsg-1_all.deb ... 292s Unpacking r-cran-highr (0.10+dfsg-1) ... 292s Selecting previously unselected package libjs-mathjax. 292s Preparing to unpack .../229-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 292s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 293s Selecting previously unselected package r-cran-knitr. 293s Preparing to unpack .../230-r-cran-knitr_1.45+dfsg-1_all.deb ... 293s Unpacking r-cran-knitr (1.45+dfsg-1) ... 293s Selecting previously unselected package r-cran-tinytex. 293s Preparing to unpack .../231-r-cran-tinytex_0.49-1_all.deb ... 293s Unpacking r-cran-tinytex (0.49-1) ... 293s Selecting previously unselected package libjs-modernizr. 293s Preparing to unpack .../232-libjs-modernizr_2.6.2+ds1-5_all.deb ... 293s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 293s Selecting previously unselected package r-cran-rmarkdown. 293s Preparing to unpack .../233-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 293s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 293s Selecting previously unselected package r-cran-htmlwidgets. 293s Preparing to unpack .../234-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 293s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 293s Selecting previously unselected package r-cran-lazyeval. 293s Preparing to unpack .../235-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ... 293s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 293s Selecting previously unselected package r-cran-crosstalk. 293s Preparing to unpack .../236-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 293s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 293s Selecting previously unselected package r-cran-dt. 293s Preparing to unpack .../237-r-cran-dt_0.31+dfsg-1_all.deb ... 293s Unpacking r-cran-dt (0.31+dfsg-1) ... 293s Selecting previously unselected package r-bioc-interactivedisplaybase. 293s Preparing to unpack .../238-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 293s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 293s Selecting previously unselected package r-bioc-annotationhub. 293s Preparing to unpack .../239-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 293s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 293s Selecting previously unselected package r-bioc-biocio. 293s Preparing to unpack .../240-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 293s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 294s Selecting previously unselected package r-cran-formatr. 294s Preparing to unpack .../241-r-cran-formatr_1.14-1_all.deb ... 294s Unpacking r-cran-formatr (1.14-1) ... 294s Selecting previously unselected package r-cran-lambda.r. 294s Preparing to unpack .../242-r-cran-lambda.r_1.2.4-2build1_all.deb ... 294s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 294s Selecting previously unselected package r-cran-futile.options. 294s Preparing to unpack .../243-r-cran-futile.options_1.0.1-3build1_all.deb ... 294s Unpacking r-cran-futile.options (1.0.1-3build1) ... 294s Selecting previously unselected package r-cran-futile.logger. 294s Preparing to unpack .../244-r-cran-futile.logger_1.4.3-4build1_all.deb ... 294s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 294s Selecting previously unselected package r-cran-snow. 294s Preparing to unpack .../245-r-cran-snow_1%3a0.4.4-2_all.deb ... 294s Unpacking r-cran-snow (1:0.4.4-2) ... 294s Selecting previously unselected package r-cran-codetools. 294s Preparing to unpack .../246-r-cran-codetools_0.2-19-1_all.deb ... 294s Unpacking r-cran-codetools (0.2-19-1) ... 294s Selecting previously unselected package r-cran-bh. 294s Preparing to unpack .../247-r-cran-bh_1.84.0-1_all.deb ... 294s Unpacking r-cran-bh (1.84.0-1) ... 294s Selecting previously unselected package r-bioc-biocparallel. 294s Preparing to unpack .../248-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 294s Unpacking r-bioc-biocparallel (1.36.0-1) ... 294s Selecting previously unselected package r-cran-bookdown. 294s Preparing to unpack .../249-r-cran-bookdown_0.37+dfsg-1_all.deb ... 294s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 294s Selecting previously unselected package tex-common. 294s Preparing to unpack .../250-tex-common_6.18_all.deb ... 294s Unpacking tex-common (6.18) ... 294s Selecting previously unselected package t1utils. 294s Preparing to unpack .../251-t1utils_1.41-4build2_ppc64el.deb ... 294s Unpacking t1utils (1.41-4build2) ... 294s Selecting previously unselected package texlive-binaries. 294s Preparing to unpack .../252-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 294s Unpacking texlive-binaries (2023.20230311.66589-9) ... 294s Selecting previously unselected package texlive-base. 294s Preparing to unpack .../253-texlive-base_2023.20240207-1_all.deb ... 294s Unpacking texlive-base (2023.20240207-1) ... 296s Selecting previously unselected package texlive-latex-base. 296s Preparing to unpack .../254-texlive-latex-base_2023.20240207-1_all.deb ... 296s Unpacking texlive-latex-base (2023.20240207-1) ... 296s Selecting previously unselected package texlive-bibtex-extra. 296s Preparing to unpack .../255-texlive-bibtex-extra_2023.20240207-1_all.deb ... 296s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 298s Selecting previously unselected package r-bioc-biocstyle. 298s Preparing to unpack .../256-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 298s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 298s Selecting previously unselected package r-cran-xml. 298s Preparing to unpack .../257-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 298s Unpacking r-cran-xml (3.99-0.16.1-1) ... 298s Selecting previously unselected package r-cran-hms. 298s Preparing to unpack .../258-r-cran-hms_1.1.3-1_all.deb ... 298s Unpacking r-cran-hms (1.1.3-1) ... 298s Selecting previously unselected package r-cran-prettyunits. 298s Preparing to unpack .../259-r-cran-prettyunits_1.2.0-1_all.deb ... 298s Unpacking r-cran-prettyunits (1.2.0-1) ... 298s Selecting previously unselected package r-cran-progress. 298s Preparing to unpack .../260-r-cran-progress_1.2.3-1_all.deb ... 298s Unpacking r-cran-progress (1.2.3-1) ... 298s Selecting previously unselected package r-cran-xml2. 298s Preparing to unpack .../261-r-cran-xml2_1.3.6-1_ppc64el.deb ... 298s Unpacking r-cran-xml2 (1.3.6-1) ... 298s Selecting previously unselected package r-bioc-biomart. 298s Preparing to unpack .../262-r-bioc-biomart_2.58.2+dfsg-1_all.deb ... 298s Unpacking r-bioc-biomart (2.58.2+dfsg-1) ... 298s Selecting previously unselected package r-bioc-genomicranges. 298s Preparing to unpack .../263-r-bioc-genomicranges_1.54.1+dfsg-1_ppc64el.deb ... 298s Unpacking r-bioc-genomicranges (1.54.1+dfsg-1) ... 299s Selecting previously unselected package r-bioc-rhtslib. 299s Preparing to unpack .../264-r-bioc-rhtslib_2.4.1+dfsg-1_ppc64el.deb ... 299s Unpacking r-bioc-rhtslib (2.4.1+dfsg-1) ... 299s Selecting previously unselected package r-bioc-rsamtools. 299s Preparing to unpack .../265-r-bioc-rsamtools_2.18.0+dfsg-1_ppc64el.deb ... 299s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1) ... 299s Selecting previously unselected package r-cran-matrixstats. 299s Preparing to unpack .../266-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 299s Unpacking r-cran-matrixstats (1.2.0-1) ... 299s Selecting previously unselected package r-bioc-matrixgenerics. 299s Preparing to unpack .../267-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 299s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 299s Selecting previously unselected package r-cran-lattice. 299s Preparing to unpack .../268-r-cran-lattice_0.22-5-1_ppc64el.deb ... 299s Unpacking r-cran-lattice (0.22-5-1) ... 299s Selecting previously unselected package r-cran-matrix. 299s Preparing to unpack .../269-r-cran-matrix_1.6-5-1_ppc64el.deb ... 299s Unpacking r-cran-matrix (1.6-5-1) ... 299s Selecting previously unselected package r-cran-abind. 299s Preparing to unpack .../270-r-cran-abind_1.4-5-2_all.deb ... 299s Unpacking r-cran-abind (1.4-5-2) ... 299s Selecting previously unselected package r-bioc-s4arrays. 299s Preparing to unpack .../271-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 299s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 299s Selecting previously unselected package r-bioc-sparsearray. 299s Preparing to unpack .../272-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 299s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 299s Selecting previously unselected package r-bioc-delayedarray. 299s Preparing to unpack .../273-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 299s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 299s Selecting previously unselected package r-bioc-summarizedexperiment. 299s Preparing to unpack .../274-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 299s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 299s Selecting previously unselected package r-bioc-genomicalignments. 299s Preparing to unpack .../275-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 299s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 299s Selecting previously unselected package r-cran-rjson. 299s Preparing to unpack .../276-r-cran-rjson_0.2.21-1_ppc64el.deb ... 299s Unpacking r-cran-rjson (0.2.21-1) ... 299s Selecting previously unselected package r-cran-restfulr. 299s Preparing to unpack .../277-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 299s Unpacking r-cran-restfulr (0.0.15-1) ... 299s Selecting previously unselected package r-bioc-rtracklayer. 299s Preparing to unpack .../278-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 299s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 299s Selecting previously unselected package r-bioc-bsgenome. 299s Preparing to unpack .../279-r-bioc-bsgenome_1.70.2-1_all.deb ... 299s Unpacking r-bioc-bsgenome (1.70.2-1) ... 299s Selecting previously unselected package r-bioc-genomicfeatures. 299s Preparing to unpack .../280-r-bioc-genomicfeatures_1.54.1+dfsg-1_all.deb ... 299s Unpacking r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 299s Selecting previously unselected package r-cran-survival. 299s Preparing to unpack .../281-r-cran-survival_3.5-8-1_ppc64el.deb ... 299s Unpacking r-cran-survival (3.5-8-1) ... 300s Selecting previously unselected package r-bioc-snpstats. 300s Preparing to unpack .../282-r-bioc-snpstats_1.52.0+dfsg-1_ppc64el.deb ... 300s Unpacking r-bioc-snpstats (1.52.0+dfsg-1) ... 300s Selecting previously unselected package r-bioc-variantannotation. 300s Preparing to unpack .../283-r-bioc-variantannotation_1.48.1-1_ppc64el.deb ... 300s Unpacking r-bioc-variantannotation (1.48.1-1) ... 300s Selecting previously unselected package r-cran-colorspace. 300s Preparing to unpack .../284-r-cran-colorspace_2.1-0+dfsg-1_ppc64el.deb ... 300s Unpacking r-cran-colorspace (2.1-0+dfsg-1) ... 300s Selecting previously unselected package r-cran-farver. 300s Preparing to unpack .../285-r-cran-farver_2.1.1-1_ppc64el.deb ... 300s Unpacking r-cran-farver (2.1.1-1) ... 300s Selecting previously unselected package r-cran-gtable. 300s Preparing to unpack .../286-r-cran-gtable_0.3.4+dfsg-1_all.deb ... 300s Unpacking r-cran-gtable (0.3.4+dfsg-1) ... 300s Selecting previously unselected package r-cran-isoband. 300s Preparing to unpack .../287-r-cran-isoband_0.2.7-1_ppc64el.deb ... 300s Unpacking r-cran-isoband (0.2.7-1) ... 300s Selecting previously unselected package r-cran-mass. 300s Preparing to unpack .../288-r-cran-mass_7.3-60.0.1-1_ppc64el.deb ... 300s Unpacking r-cran-mass (7.3-60.0.1-1) ... 300s Selecting previously unselected package r-cran-nlme. 300s Preparing to unpack .../289-r-cran-nlme_3.1.164-1_ppc64el.deb ... 300s Unpacking r-cran-nlme (3.1.164-1) ... 300s Selecting previously unselected package r-cran-mgcv. 300s Preparing to unpack .../290-r-cran-mgcv_1.9-1-1_ppc64el.deb ... 300s Unpacking r-cran-mgcv (1.9-1-1) ... 300s Selecting previously unselected package r-cran-labeling. 300s Preparing to unpack .../291-r-cran-labeling_0.4.3-1_all.deb ... 300s Unpacking r-cran-labeling (0.4.3-1) ... 300s Selecting previously unselected package r-cran-munsell. 300s Preparing to unpack .../292-r-cran-munsell_0.5.0-2build1_all.deb ... 300s 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autopkgtest-satdep. 300s Preparing to unpack .../298-1-autopkgtest-satdep.deb ... 300s Unpacking autopkgtest-satdep (0) ... 300s Setting up libjs-json (0~20221030+~1.0.8-1) ... 300s Setting up javascript-common (11+nmu1) ... 300s Setting up libgraphite2-3:ppc64el (1.3.14-2) ... 300s Setting up libpixman-1-0:ppc64el (0.42.2-1) ... 300s Setting up libsharpyuv0:ppc64el (1.3.2-0.4) ... 300s Setting up libpaper1:ppc64el (1.1.29) ... 301s 301s Creating config file /etc/papersize with new version 301s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 301s Setting up liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 301s Setting up libxpm4:ppc64el (1:3.5.17-1) ... 301s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 301s Setting up libxi6:ppc64el (2:1.8.1-1) ... 301s Setting up libxrender1:ppc64el (1:0.9.10-1.1) ... 301s Setting up libdatrie1:ppc64el (0.2.13-3) ... 301s Setting up libjs-popper.js (1.16.1+ds-6) ... 301s Setting up libxcb-render0:ppc64el (1.15-1) ... 301s Setting up libjs-sifter.js (0.6.0+dfsg-3) 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size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 305s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 306s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 306s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 307s Setting up r-cran-magrittr (2.0.3-1) ... 307s Setting up r-cran-rappdirs (0.3.3-1) ... 307s Setting up r-cran-filelock (1.0.3-1) ... 307s Setting up r-bioc-genomeinfodbdata (1.2.11-2) ... 307s Setting up g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 307s Setting up r-cran-littler (0.3.19-1) ... 307s Setting up r-cran-bh (1.84.0-1) ... 307s Setting up r-cran-fs (1.6.3+dfsg-1) ... 307s Setting up r-cran-rcpp (1.0.12-1) ... 307s Setting up r-cran-curl (5.2.0+dfsg-1) ... 307s Setting up r-cran-codetools (0.2-19-1) ... 307s Setting up g++-13 (13.2.0-17ubuntu2) ... 307s Setting up r-bioc-biocgenerics (0.48.1-2) ... 307s Setting up 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... 307s Setting up r-cran-cpp11 (0.4.7-1) ... 307s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 307s Setting up r-bioc-s4vectors (0.40.2+dfsg-1) ... 307s Setting up r-cran-isoband (0.2.7-1) ... 307s Setting up r-cran-runit (0.4.32-3) ... 307s Setting up r-cran-futile.logger (1.4.3-4build1) ... 307s Setting up r-cran-gtable (0.3.4+dfsg-1) ... 307s Setting up r-cran-later (1.3.2+dfsg-1) ... 307s Setting up r-cran-matrix (1.6-5-1) ... 307s Setting up r-cran-tinytex (0.49-1) ... 307s Setting up r-cran-knitr (1.45+dfsg-1) ... 307s Setting up r-cran-mgcv (1.9-1-1) ... 307s Setting up g++ (4:13.2.0-7ubuntu1) ... 307s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 307s Setting up r-cran-cachem (1.0.8-1) ... 307s Setting up build-essential (12.10ubuntu1) ... 307s Setting up r-bioc-iranges (2.36.0-1) ... 307s Setting up r-cran-rjson (0.2.21-1) ... 307s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 307s Setting up r-cran-restfulr (0.0.15-1) ... 307s Setting up r-cran-vctrs (0.6.5-1) ... 307s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 307s Setting up r-cran-ellipsis (0.3.2-2) ... 307s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 307s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 307s Setting up r-cran-stringr (1.5.1-1) ... 307s Setting up r-bioc-biocparallel (1.36.0-1) ... 307s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 307s Setting up r-cran-xml2 (1.3.6-1) ... 307s Setting up r-cran-munsell (0.5.0-2build1) ... 307s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 307s Setting up r-cran-survival (3.5-8-1) ... 307s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 307s Setting up gfortran (4:13.2.0-7ubuntu1) ... 307s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 307s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 307s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 307s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 307s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 307s Setting up r-bioc-snpstats (1.52.0+dfsg-1) ... 307s Setting up texlive-bibtex-extra (2023.20240207-1) ... 307s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 307s Setting up r-cran-httr (1.4.7+dfsg-1) ... 307s Setting up r-cran-hms (1.1.3-1) ... 307s Setting up r-cran-scales (1.3.0-1) ... 307s Setting up r-cran-memoise (2.0.1-1) ... 307s Setting up r-cran-promises (1.2.1+dfsg-1) ... 307s Setting up r-cran-purrr (1.0.2-1) ... 307s Setting up r-cran-blob (1.2.4-1) ... 307s Setting up r-cran-htmltools (0.5.7-1) ... 307s Setting up r-bioc-xvector (0.42.0-1) ... 307s Setting up r-cran-sass (0.4.8+dfsg-1) ... 307s Setting up r-cran-dplyr (1.1.4-1) ... 307s Setting up r-cran-rsqlite (2.3.4-1) ... 307s Setting up r-cran-progress (1.2.3-1) ... 307s Setting up r-base-dev (4.3.2-1build1) ... 307s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 307s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 307s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 307s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 307s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 307s Setting up r-cran-fontawesome (0.5.2-1) ... 307s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 307s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 307s Setting up r-cran-tidyr (1.3.1-1) ... 307s Setting up r-bioc-rsamtools (2.18.0+dfsg-1) ... 307s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 307s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 307s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 307s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 307s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 307s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 307s Setting up r-bioc-annotationdbi (1.64.1-1) ... 307s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 307s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 307s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 307s Setting up r-bioc-genomicalignments (1.38.2-1) ... 307s Setting up r-cran-bookdown (0.37+dfsg-1) ... 307s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 307s Setting up r-bioc-rtracklayer (1.62.0-1) ... 307s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 307s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 307s Setting up r-bioc-bsgenome (1.70.2-1) ... 307s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 307s Setting up r-cran-dt (0.31+dfsg-1) ... 307s Setting up r-bioc-variantannotation (1.48.1-1) ... 307s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 307s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 307s Setting up autopkgtest-satdep (0) ... 307s Processing triggers for man-db (2.12.0-3) ... 308s Processing triggers for install-info (7.1-3) ... 308s Processing triggers for libc-bin (2.39-0ubuntu2) ... 308s Processing triggers for tex-common (6.18) ... 309s Running updmap-sys. This may take some time... done. 309s Running mktexlsr /var/lib/texmf ... done. 309s Building format(s) --all. 360s This may take some time... done. 372s (Reading database ... 121648 files and directories currently installed.) 372s Removing autopkgtest-satdep (0) ... 373s autopkgtest [17:54:53]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 373s autopkgtest [17:54:53]: test pkg-r-autopkgtest: [----------------------- 373s Test: Try to load the R library VariantAnnotation 373s 373s R version 4.3.2 (2023-10-31) -- "Eye Holes" 373s Copyright (C) 2023 The R Foundation for Statistical Computing 373s Platform: powerpc64le-unknown-linux-gnu (64-bit) 373s 373s R is free software and comes with ABSOLUTELY NO WARRANTY. 373s You are welcome to redistribute it under certain conditions. 373s Type 'license()' or 'licence()' for distribution details. 373s 373s R is a collaborative project with many contributors. 373s Type 'contributors()' for more information and 373s 'citation()' on how to cite R or R packages in publications. 373s 373s Type 'demo()' for some demos, 'help()' for on-line help, or 373s 'help.start()' for an HTML browser interface to help. 373s Type 'q()' to quit R. 373s 373s > library('VariantAnnotation') 373s Loading required package: BiocGenerics 373s 373s Attaching package: ‘BiocGenerics’ 373s 373s The following objects are masked from ‘package:stats’: 373s 373s IQR, mad, sd, var, xtabs 373s 373s The following objects are masked from ‘package:base’: 373s 373s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 373s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 373s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 373s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 373s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 373s table, tapply, union, unique, unsplit, which.max, which.min 373s 373s Loading required package: MatrixGenerics 373s Loading required package: matrixStats 374s 374s Attaching package: ‘MatrixGenerics’ 374s 374s The following objects are masked from ‘package:matrixStats’: 374s 374s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 374s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 374s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 374s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 374s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 374s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 374s colWeightedMeans, colWeightedMedians, colWeightedSds, 374s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 374s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 374s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 374s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 374s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 374s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 374s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 374s rowWeightedSds, rowWeightedVars 374s 374s Loading required package: GenomeInfoDb 374s Loading required package: S4Vectors 374s Loading required package: stats4 374s 374s Attaching package: ‘S4Vectors’ 374s 374s The following object is masked from ‘package:utils’: 374s 374s findMatches 374s 374s The following objects are masked from ‘package:base’: 374s 374s expand.grid, I, unname 374s 374s Loading required package: IRanges 376s Loading required package: GenomicRanges 376s Loading required package: SummarizedExperiment 376s Loading required package: Biobase 377s Welcome to Bioconductor 377s 377s Vignettes contain introductory material; view with 377s 'browseVignettes()'. To cite Bioconductor, see 377s 'citation("Biobase")', and for packages 'citation("pkgname")'. 377s 377s 377s Attaching package: ‘Biobase’ 377s 377s The following object is masked from ‘package:MatrixGenerics’: 377s 377s rowMedians 377s 377s The following objects are masked from ‘package:matrixStats’: 377s 377s anyMissing, rowMedians 377s 380s Loading required package: Rsamtools 380s Loading required package: Biostrings 380s Loading required package: XVector 380s 380s Attaching package: ‘Biostrings’ 380s 380s The following object is masked from ‘package:base’: 380s 380s strsplit 380s 386s 386s Attaching package: ‘VariantAnnotation’ 386s 386s The following object is masked from ‘package:base’: 386s 386s tabulate 386s 386s > 386s > 386s Other tests are currently unsupported! 386s They will be progressively added. 387s autopkgtest [17:55:07]: test pkg-r-autopkgtest: -----------------------] 387s autopkgtest [17:55:07]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 387s pkg-r-autopkgtest PASS 387s autopkgtest [17:55:07]: @@@@@@@@@@@@@@@@@@@@ summary 387s pkg-r-autopkgtest PASS 406s Creating nova instance adt-noble-ppc64el-r-bioc-variantannotation-20240318-174840-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240318.img (UUID 290ce4c5-ca44-4691-9a55-79589f8700e4)...