0s autopkgtest [21:51:20]: starting date and time: 2024-03-17 21:51:20+0000 0s autopkgtest [21:51:20]: git checkout: b506e79c ssh-setup/nova: fix ARCH having two lines of data 0s autopkgtest [21:51:20]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i_90wp82/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-bioc-rsamtools,src:curl,src:libpsl,src:openssl,src:orthanc-python --apt-upgrade r-bioc-variantannotation --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-bioc-rsamtools/2.18.0+dfsg-1build1 curl/8.5.0-2ubuntu7 libpsl/0.21.2-1.1 openssl/3.0.13-0ubuntu1 orthanc-python/4.1+ds-2build3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos02-ppc64el-20.secgroup --name adt-noble-ppc64el-r-bioc-variantannotation-20240317-215120-juju-7f2275-prod-proposed-migration-environment-2 --image adt/ubuntu-noble-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 77s autopkgtest [21:52:37]: testbed dpkg architecture: ppc64el 78s autopkgtest [21:52:38]: testbed apt version: 2.7.12 78s autopkgtest [21:52:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s Get:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] 79s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main Sources [484 kB] 79s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/universe Sources [3676 kB] 79s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/restricted Sources [6540 B] 79s Get:5 http://ftpmaster.internal/ubuntu noble-proposed/multiverse Sources [51.4 kB] 79s Get:6 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el Packages [643 kB] 79s Get:7 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el c-n-f Metadata [3116 B] 79s Get:8 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el Packages [1372 B] 79s Get:9 http://ftpmaster.internal/ubuntu noble-proposed/restricted ppc64el c-n-f Metadata [116 B] 79s Get:10 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el Packages [3974 kB] 79s Get:11 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el c-n-f Metadata [8652 B] 79s Get:12 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el Packages [48.0 kB] 79s Get:13 http://ftpmaster.internal/ubuntu noble-proposed/multiverse ppc64el c-n-f Metadata [116 B] 83s Fetched 9012 kB in 2s (4336 kB/s) 83s Reading package lists... 85s Reading package lists... 86s Building dependency tree... 86s Reading state information... 86s Calculating upgrade... 86s The following packages will be REMOVED: 86s libssl3 86s The following NEW packages will be installed: 86s libssl3t64 86s The following packages have been kept back: 86s curl 86s The following packages will be upgraded: 86s openssl 86s 1 upgraded, 1 newly installed, 1 to remove and 1 not upgraded. 86s Need to get 3195 kB of archives. 86s After this operation, 6144 B of additional disk space will be used. 86s Get:1 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el openssl ppc64el 3.0.13-0ubuntu1 [1028 kB] 87s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libssl3t64 ppc64el 3.0.13-0ubuntu1 [2168 kB] 87s Fetched 3195 kB in 1s (4037 kB/s) 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 87s Preparing to unpack .../openssl_3.0.13-0ubuntu1_ppc64el.deb ... 87s Unpacking openssl (3.0.13-0ubuntu1) over (3.0.10-1ubuntu4) ... 87s dpkg: libssl3:ppc64el: dependency problems, but removing anyway as you requested: 87s wget depends on libssl3 (>= 3.0.0). 87s tnftp depends on libssl3 (>= 3.0.0). 87s tcpdump depends on libssl3 (>= 3.0.0). 87s systemd-resolved depends on libssl3 (>= 3.0.0). 87s systemd depends on libssl3 (>= 3.0.0). 87s sudo depends on libssl3 (>= 3.0.0). 87s rsync depends on libssl3 (>= 3.0.0). 87s python3-cryptography depends on libssl3 (>= 3.0.0). 87s openssh-server depends on libssl3 (>= 3.0.10). 87s openssh-client depends on libssl3 (>= 3.0.10). 87s linux-headers-6.8.0-11-generic depends on libssl3 (>= 3.0.0). 87s libsystemd-shared:ppc64el depends on libssl3 (>= 3.0.0). 87s libssh-4:ppc64el depends on libssl3 (>= 3.0.0). 87s libsasl2-modules:ppc64el depends on libssl3 (>= 3.0.0). 87s libsasl2-2:ppc64el depends on libssl3 (>= 3.0.0). 87s libpython3.12-minimal:ppc64el depends on libssl3 (>= 3.0.0). 87s libpython3.11-minimal:ppc64el depends on libssl3 (>= 3.0.0). 87s libnvme1 depends on libssl3 (>= 3.0.0). 87s libkrb5-3:ppc64el depends on libssl3 (>= 3.0.0). 87s libkmod2:ppc64el depends on libssl3 (>= 3.0.0). 87s libfido2-1:ppc64el depends on libssl3 (>= 3.0.0). 87s libcurl4:ppc64el depends on libssl3 (>= 3.0.0). 87s libcryptsetup12:ppc64el depends on libssl3 (>= 3.0.0). 87s kmod depends on libssl3 (>= 3.0.0). 87s dhcpcd-base depends on libssl3 (>= 3.0.0). 87s bind9-libs:ppc64el depends on libssl3 (>= 3.0.0). 87s 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70095 files and directories currently installed.) 87s Removing libssl3:ppc64el (3.0.10-1ubuntu4) ... 87s Selecting previously unselected package libssl3t64:ppc64el. 87s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70084 files and directories currently installed.) 87s Preparing to unpack .../libssl3t64_3.0.13-0ubuntu1_ppc64el.deb ... 87s Unpacking libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 87s Setting up libssl3t64:ppc64el (3.0.13-0ubuntu1) ... 87s Setting up openssl (3.0.13-0ubuntu1) ... 87s Processing triggers for man-db (2.12.0-3) ... 89s Processing triggers for libc-bin (2.39-0ubuntu2) ... 89s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 90s Hit:1 http://ftpmaster.internal/ubuntu noble-proposed InRelease 90s Hit:2 http://ftpmaster.internal/ubuntu noble InRelease 90s Hit:3 http://ftpmaster.internal/ubuntu noble-updates InRelease 90s Hit:4 http://ftpmaster.internal/ubuntu noble-security InRelease 91s Reading package lists... 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Calculating upgrade... 91s The following packages have been kept back: 91s curl 91s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 91s Reading package lists... 92s Building dependency tree... 92s Reading state information... 92s 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 94s autopkgtest [21:52:54]: testbed running kernel: Linux 6.8.0-11-generic #11-Ubuntu SMP Wed Feb 14 00:33:03 UTC 2024 95s autopkgtest [21:52:55]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-variantannotation 96s Get:1 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (dsc) [2587 B] 96s Get:2 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (tar) [1887 kB] 96s Get:3 http://ftpmaster.internal/ubuntu noble/universe r-bioc-variantannotation 1.48.1-1 (diff) [7900 B] 97s gpgv: Signature made Fri Dec 1 09:59:29 2023 UTC 97s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 97s gpgv: issuer "tillea@rki.de" 97s gpgv: Can't check signature: No public key 97s dpkg-source: warning: cannot verify inline signature for ./r-bioc-variantannotation_1.48.1-1.dsc: no acceptable signature found 97s autopkgtest [21:52:57]: testing package r-bioc-variantannotation version 1.48.1-1 97s autopkgtest [21:52:57]: build not needed 99s autopkgtest [21:52:59]: test pkg-r-autopkgtest: preparing testbed 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s Starting pkgProblemResolver with broken count: 0 100s Starting 2 pkgProblemResolver with broken count: 0 100s Done 100s The following additional packages will be installed: 100s build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 100s cpp-powerpc64le-linux-gnu curl dctrl-tools fontconfig fontconfig-config 100s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 100s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 100s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 100s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 100s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 100s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 100s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 100s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 100s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 100s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 100s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 100s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 100s libjs-highlight.js libjs-jquery libjs-jquery-datatables 100s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 100s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 100s libjs-popper.js libjs-prettify libjs-sifter.js 100s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 100s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 100s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 100s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 100s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 100s libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 100s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 100s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 100s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 100s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 100s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 100s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 100s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 100s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 100s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 100s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 100s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 100s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 100s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 100s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 100s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 100s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 100s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 100s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 100s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 100s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 100s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 100s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 100s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 100s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 100s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 100s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 100s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 100s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 100s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 100s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 100s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 100s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 100s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 100s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 100s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 100s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 100s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 100s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 100s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 100s x11-common xdg-utils zip zlib1g-dev 100s Suggested packages: 100s cpp-doc gcc-13-locales cpp-13-doc debtags gcc-13-doc gcc-multilib 100s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 100s gdb-powerpc64le-linux-gnu gfortran-doc gfortran-13-doc libcoarrays-dev 100s apache2 | lighttpd | httpd liblapack-doc libboost-doc libboost1.83-doc 100s libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev 100s libboost-context1.83-dev libboost-contract1.83-dev 100s libboost-coroutine1.83-dev libboost-date-time1.83-dev 100s libboost-exception1.83-dev libboost-fiber1.83-dev 100s libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev 100s libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev 100s libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev 100s libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev 100s libboost-numpy1.83-dev libboost-program-options1.83-dev 100s libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev 100s libboost-serialization1.83-dev libboost-stacktrace1.83-dev 100s libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev 100s libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev 100s libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev 100s glibc-doc icu-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix 100s libjs-mathjax-doc liblzma-doc ncurses-doc readline-doc libstdc++-13-doc 100s tcl8.6 tk8.6 nodejs texlive-latex-recommended texlive-xetex texlive-luatex 100s pandoc-citeproc texlive-latex-extra context wkhtmltopdf librsvg2-bin groff 100s ghc php python ruby libjs-katex citation-style-language-styles elpa-ess 100s r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic 100s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 100s r-bioc-go.db r-bioc-org.hs.eg.db r-bioc-graph r-bioc-ensembldb 100s r-bioc-experimenthub r-bioc-all r-cran-testthat r-bioc-affy r-bioc-deseq2 100s r-bioc-annotate r-cran-foreach r-cran-bbmisc r-cran-doparallel 100s r-bioc-shortread r-cran-batchtools r-cran-data.table r-cran-mockery 100s r-cran-webmockr r-bioc-hdf5array r-bioc-genefilter r-cran-lobstr 100s r-bioc-delayedmatrixstats r-cran-r.utils r-bioc-edger 100s r-bioc-annotationfilter r-cran-markdown r-bioc-gviz r-bioc-dexseq 100s r-bioc-sparsematrixstats r-bioc-limma r-cran-hexbin r-bioc-rhdf5 100s r-cran-roxygen2 r-cran-ff r-cran-covr r-cran-kernsmooth r-cran-kernlab 100s r-cran-mvtnorm r-cran-vcd r-cran-shinyjs r-cran-jpeg r-cran-viridis 100s r-cran-rstudioapi r-cran-rmysql r-cran-lubridate r-cran-magick r-cran-sf 100s r-cran-getopt r-cran-formattable r-cran-nanotime r-cran-palmerpenguins 100s r-cran-units r-cran-vdiffr r-cran-inline r-cran-rmpi r-cran-rlecuyer 100s r-cran-spelling r-cran-bench r-cran-brio r-cran-callr r-cran-here 100s r-cran-pkgbuild r-cran-pkgload r-cran-plm r-cran-zoo debhelper ghostscript 100s gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec hintview 100s texlive-latex-base-doc wp2latex 100s Recommended packages: 100s bzip2-doc manpages manpages-dev libc-devtools node-jquery libpng-tools 100s r-recommended r-doc-html r-cran-testthat r-cran-remotes r-cran-downlit 100s r-cran-rstudioapi r-cran-miniui r-cran-rsconnect r-cran-testit r-cran-tufte 100s r-cran-webshot r-cran-thematic r-cran-callr r-cran-covr r-cran-mockery 100s r-cran-processx r-cran-ps r-cran-rprojroot r-cran-whoami r-cran-bench 100s r-cran-brio r-cran-decor r-cran-desc r-cran-lobstr r-cran-spelling 100s r-cran-webutils r-cran-rpostgresql r-cran-broom r-cran-rmysql r-cran-future 100s w3m | www-browser r-cran-unitizer r-cran-rsvg r-cran-pkgload r-cran-hexbin 100s r-cran-hmisc r-cran-mapproj r-cran-maps r-cran-multcomp r-cran-profvis 100s r-cran-quantreg r-cran-ragg r-cran-rpart r-cran-sf r-cran-svglite 100s r-cran-vdiffr r-cran-waldo r-cran-cairo r-cran-markdown r-cran-jpeg 100s r-cran-readr r-cran-r.rsp r-cran-gridsvg r-cran-magick r-cran-reticulate 100s r-cran-rgl r-cran-tikzdevice node-highlight.js r-cran-lintr r-cran-tidyverse 100s r-cran-r.devices r-cran-sodium r-cran-lubridate r-cran-usethis 100s r-cran-dygraphs r-cran-dbitest r-cran-gert r-cran-gh r-cran-rvest 100s r-cran-dichromat r-cran-data.table r-cran-mockr r-cran-formattable 100s r-cran-pkgdown r-cran-zeallot r-cran-renv lmodern dvisvgm 100s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 100s x11-xserver-utils 101s The following packages will be REMOVED: 101s libcurl4 libpsl5 101s The following NEW packages will be installed: 101s autopkgtest-satdep build-essential cpp cpp-13 cpp-13-powerpc64le-linux-gnu 101s cpp-powerpc64le-linux-gnu dctrl-tools fontconfig fontconfig-config 101s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 101s fonts-glyphicons-halflings fonts-lmodern fonts-mathjax g++ g++-13 101s g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc gcc-13 101s gcc-13-powerpc64le-linux-gnu gcc-powerpc64le-linux-gnu gfortran gfortran-13 101s gfortran-13-powerpc64le-linux-gnu gfortran-powerpc64le-linux-gnu 101s icu-devtools javascript-common libasan8 libatomic1 libbibtex-parser-perl 101s libblas-dev libblas3 libboost-dev libboost1.83-dev libbz2-dev libc-dev-bin 101s libc6-dev libcairo2 libcc1-0 libcrypt-dev libcurl4t64 libdatrie1 libdeflate0 101s libfontconfig1 libgcc-13-dev libgfortran-13-dev libgfortran5 libgomp1 101s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl libisl23 101s libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 101s libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim 101s libjs-highlight.js libjs-jquery libjs-jquery-datatables 101s libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui 101s libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 101s libjs-popper.js libjs-prettify libjs-sifter.js 101s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 101s liblatex-tounicode-perl liblerc4 liblsan0 liblzma-dev libmpc3 libncurses-dev 101s libnsl-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 101s libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 101s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libpsl5t64 101s libptexenc1 libquadmath0 libreadline-dev libsharpyuv0 libsm6 101s libstdc++-13-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 101s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 101s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 101s libxss1 libxt6 libzzip-0-13 linux-libc-dev node-bootstrap-sass 101s node-html5shiv node-normalize.css pandoc pandoc-data pkg-config 101s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 101s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 101s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 101s r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart r-bioc-biostrings 101s r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 101s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 101s r-bioc-genomicranges r-bioc-interactivedisplaybase r-bioc-iranges 101s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools 101s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-snpstats 101s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-variantannotation 101s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 101s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 101s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 101s r-cran-codetools r-cran-colorspace r-cran-commonmark r-cran-cpp11 101s r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-dbi r-cran-dbplyr 101s r-cran-digest r-cran-dplyr r-cran-dt r-cran-ellipsis r-cran-evaluate 101s r-cran-fansi r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome 101s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 101s r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-highr 101s r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr 101s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling 101s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle 101s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixstats 101s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 101s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 101s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 101s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 101s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 101s r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 101s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-survival r-cran-sys 101s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-utf8 101s r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun r-cran-xml 101s r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common 101s texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip 101s x11-common xdg-utils zip zlib1g-dev 101s The following packages will be upgraded: 101s curl 101s 1 upgraded, 301 newly installed, 2 to remove and 0 not upgraded. 101s Need to get 466 MB/466 MB of archives. 101s After this operation, 1460 MB of additional disk space will be used. 101s Get:1 /tmp/autopkgtest.yK9q8d/1-autopkgtest-satdep.deb autopkgtest-satdep ppc64el 0 [776 B] 101s Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libpsl5t64 ppc64el 0.21.2-1.1 [59.0 kB] 101s Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el curl ppc64el 8.5.0-2ubuntu7 [234 kB] 101s Get:4 http://ftpmaster.internal/ubuntu noble-proposed/main ppc64el libcurl4t64 ppc64el 8.5.0-2ubuntu7 [428 kB] 102s Get:5 http://ftpmaster.internal/ubuntu noble/main ppc64el libc-dev-bin ppc64el 2.39-0ubuntu2 [21.3 kB] 102s Get:6 http://ftpmaster.internal/ubuntu noble/main ppc64el linux-libc-dev ppc64el 6.8.0-11.11 [1585 kB] 102s Get:7 http://ftpmaster.internal/ubuntu noble/main ppc64el libcrypt-dev ppc64el 1:4.4.36-4 [167 kB] 102s Get:8 http://ftpmaster.internal/ubuntu noble/main ppc64el libtirpc-dev ppc64el 1.3.4+ds-1build1 [262 kB] 102s Get:9 http://ftpmaster.internal/ubuntu noble/main ppc64el libnsl-dev ppc64el 1.3.0-3 [79.2 kB] 102s Get:10 http://ftpmaster.internal/ubuntu noble/main ppc64el rpcsvc-proto ppc64el 1.4.2-0ubuntu6 [82.3 kB] 102s Get:11 http://ftpmaster.internal/ubuntu noble/main ppc64el libc6-dev ppc64el 2.39-0ubuntu2 [2102 kB] 102s Get:12 http://ftpmaster.internal/ubuntu noble/main ppc64el libisl23 ppc64el 0.26-3 [864 kB] 102s Get:13 http://ftpmaster.internal/ubuntu noble/main ppc64el libmpc3 ppc64el 1.3.1-1 [61.2 kB] 102s Get:14 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [10.7 MB] 102s Get:15 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-13 ppc64el 13.2.0-17ubuntu2 [1038 B] 102s Get:16 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [5330 B] 102s Get:17 http://ftpmaster.internal/ubuntu noble/main ppc64el cpp ppc64el 4:13.2.0-7ubuntu1 [22.5 kB] 102s Get:18 http://ftpmaster.internal/ubuntu noble/main ppc64el libcc1-0 ppc64el 14-20240303-1ubuntu1 [48.1 kB] 102s Get:19 http://ftpmaster.internal/ubuntu noble/main ppc64el libgomp1 ppc64el 14-20240303-1ubuntu1 [161 kB] 102s Get:20 http://ftpmaster.internal/ubuntu noble/main ppc64el libitm1 ppc64el 14-20240303-1ubuntu1 [32.4 kB] 102s Get:21 http://ftpmaster.internal/ubuntu noble/main ppc64el libatomic1 ppc64el 14-20240303-1ubuntu1 [10.7 kB] 102s Get:22 http://ftpmaster.internal/ubuntu noble/main ppc64el libasan8 ppc64el 14-20240303-1ubuntu1 [2973 kB] 102s Get:23 http://ftpmaster.internal/ubuntu noble/main ppc64el liblsan0 ppc64el 14-20240303-1ubuntu1 [1325 kB] 102s Get:24 http://ftpmaster.internal/ubuntu noble/main ppc64el libtsan2 ppc64el 14-20240303-1ubuntu1 [2734 kB] 102s Get:25 http://ftpmaster.internal/ubuntu noble/main ppc64el libubsan1 ppc64el 14-20240303-1ubuntu1 [1194 kB] 102s Get:26 http://ftpmaster.internal/ubuntu noble/main ppc64el libquadmath0 ppc64el 14-20240303-1ubuntu1 [158 kB] 102s Get:27 http://ftpmaster.internal/ubuntu noble/main ppc64el libgcc-13-dev ppc64el 13.2.0-17ubuntu2 [1581 kB] 102s Get:28 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [20.6 MB] 103s Get:29 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-13 ppc64el 13.2.0-17ubuntu2 [477 kB] 103s Get:30 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1224 B] 103s Get:31 http://ftpmaster.internal/ubuntu noble/main ppc64el gcc ppc64el 4:13.2.0-7ubuntu1 [5022 B] 103s Get:32 http://ftpmaster.internal/ubuntu noble/main ppc64el libstdc++-13-dev ppc64el 13.2.0-17ubuntu2 [2445 kB] 103s Get:33 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [12.2 MB] 103s Get:34 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-13 ppc64el 13.2.0-17ubuntu2 [14.5 kB] 103s Get:35 http://ftpmaster.internal/ubuntu noble/main ppc64el g++-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [968 B] 103s Get:36 http://ftpmaster.internal/ubuntu noble/main ppc64el g++ ppc64el 4:13.2.0-7ubuntu1 [1086 B] 103s Get:37 http://ftpmaster.internal/ubuntu noble/main ppc64el build-essential ppc64el 12.10ubuntu1 [4936 B] 103s Get:38 http://ftpmaster.internal/ubuntu noble/main ppc64el dctrl-tools ppc64el 2.24-3build2 [70.6 kB] 103s Get:39 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 103s Get:40 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 103s Get:41 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig-config ppc64el 2.15.0-1ubuntu1 [37.0 kB] 103s Get:42 http://ftpmaster.internal/ubuntu noble/main ppc64el libfontconfig1 ppc64el 2.15.0-1ubuntu1 [190 kB] 103s Get:43 http://ftpmaster.internal/ubuntu noble/main ppc64el fontconfig ppc64el 2.15.0-1ubuntu1 [192 kB] 103s Get:44 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 103s Get:45 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 103s Get:46 http://ftpmaster.internal/ubuntu noble/universe ppc64el fonts-lmodern all 2.005-1 [4799 kB] 103s Get:47 http://ftpmaster.internal/ubuntu noble/main ppc64el fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 103s Get:48 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran5 ppc64el 14-20240303-1ubuntu1 [574 kB] 103s Get:49 http://ftpmaster.internal/ubuntu noble/main ppc64el libgfortran-13-dev ppc64el 13.2.0-17ubuntu2 [604 kB] 103s Get:50 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13-powerpc64le-linux-gnu ppc64el 13.2.0-17ubuntu2 [11.2 MB] 104s Get:51 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-13 ppc64el 13.2.0-17ubuntu2 [10.3 kB] 104s Get:52 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran-powerpc64le-linux-gnu ppc64el 4:13.2.0-7ubuntu1 [1030 B] 104s Get:53 http://ftpmaster.internal/ubuntu noble/main ppc64el gfortran ppc64el 4:13.2.0-7ubuntu1 [1170 B] 104s Get:54 http://ftpmaster.internal/ubuntu noble/main ppc64el icu-devtools ppc64el 74.2-1ubuntu1 [246 kB] 104s Get:55 http://ftpmaster.internal/ubuntu noble/main ppc64el javascript-common all 11+nmu1 [5936 B] 104s Get:56 http://ftpmaster.internal/ubuntu noble/main ppc64el libio-string-perl all 1.08-4 [11.1 kB] 104s Get:57 http://ftpmaster.internal/ubuntu noble/universe ppc64el liblatex-tounicode-perl all 0.54-2 [29.0 kB] 104s Get:58 http://ftpmaster.internal/ubuntu noble/universe ppc64el libbibtex-parser-perl all 1.04+dfsg-1 [16.7 kB] 104s Get:59 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas3 ppc64el 3.12.0-3 [227 kB] 104s Get:60 http://ftpmaster.internal/ubuntu noble/main ppc64el libblas-dev ppc64el 3.12.0-3 [301 kB] 104s Get:61 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost1.83-dev ppc64el 1.83.0-2ubuntu1 [15.3 MB] 104s Get:62 http://ftpmaster.internal/ubuntu noble/main ppc64el libboost-dev ppc64el 1.83.0.1ubuntu2 [4312 B] 104s Get:63 http://ftpmaster.internal/ubuntu noble/main ppc64el libbz2-dev ppc64el 1.0.8-5ubuntu1 [51.2 kB] 104s Get:64 http://ftpmaster.internal/ubuntu noble/main ppc64el libpixman-1-0 ppc64el 0.42.2-1 [300 kB] 104s Get:65 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-render0 ppc64el 1.15-1 [17.2 kB] 104s Get:66 http://ftpmaster.internal/ubuntu noble/main ppc64el libxcb-shm0 ppc64el 1.15-1 [5896 B] 104s Get:67 http://ftpmaster.internal/ubuntu noble/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1 [23.3 kB] 104s Get:68 http://ftpmaster.internal/ubuntu noble/main ppc64el libcairo2 ppc64el 1.18.0-1 [735 kB] 104s Get:69 http://ftpmaster.internal/ubuntu noble/main ppc64el libdatrie1 ppc64el 0.2.13-3 [25.1 kB] 104s Get:70 http://ftpmaster.internal/ubuntu noble/main ppc64el libdeflate0 ppc64el 1.19-1 [61.9 kB] 104s Get:71 http://ftpmaster.internal/ubuntu noble/main ppc64el libgraphite2-3 ppc64el 1.3.14-2 [105 kB] 104s Get:72 http://ftpmaster.internal/ubuntu noble/main ppc64el libharfbuzz0b ppc64el 8.3.0-2 [576 kB] 104s Get:73 http://ftpmaster.internal/ubuntu noble/main ppc64el x11-common all 1:7.7+23ubuntu2 [23.4 kB] 104s Get:74 http://ftpmaster.internal/ubuntu noble/main ppc64el libice6 ppc64el 2:1.0.10-1build2 [49.3 kB] 104s Get:75 http://ftpmaster.internal/ubuntu noble/main ppc64el libicu-dev ppc64el 74.2-1ubuntu1 [12.5 MB] 104s Get:76 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-2ubuntu1 [212 kB] 104s Get:77 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-turbo8-dev ppc64el 2.1.5-2ubuntu1 [357 kB] 104s Get:78 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 104s Get:79 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg8-dev ppc64el 8c-2ubuntu11 [1484 B] 104s Get:80 http://ftpmaster.internal/ubuntu noble/main ppc64el libjpeg-dev ppc64el 8c-2ubuntu11 [1486 B] 104s Get:81 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 104s Get:82 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 104s Get:83 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 105s Get:84 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-d3 all 3.5.17-4 [132 kB] 105s Get:85 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-es5-shim all 4.6.7-2 [39.8 kB] 105s Get:86 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 105s Get:87 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 105s Get:88 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 105s Get:89 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] 105s Get:90 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 105s Get:91 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 105s Get:92 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 105s Get:93 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 105s Get:94 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 105s Get:95 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 105s Get:96 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 105s Get:97 http://ftpmaster.internal/ubuntu noble/main ppc64el libkpathsea6 ppc64el 2023.20230311.66589-9 [71.2 kB] 105s Get:98 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack3 ppc64el 3.12.0-3 [2804 kB] 105s Get:99 http://ftpmaster.internal/ubuntu noble/main ppc64el liblapack-dev ppc64el 3.12.0-3 [6100 kB] 105s Get:100 http://ftpmaster.internal/ubuntu noble/main ppc64el liblerc4 ppc64el 4.0.0+ds-4ubuntu1 [266 kB] 105s Get:101 http://ftpmaster.internal/ubuntu noble/main ppc64el libncurses-dev ppc64el 6.4+20240113-1ubuntu1 [485 kB] 105s Get:102 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai-data all 0.1.29-2 [158 kB] 105s Get:103 http://ftpmaster.internal/ubuntu noble/main ppc64el libthai0 ppc64el 0.1.29-2 [21.4 kB] 105s Get:104 http://ftpmaster.internal/ubuntu noble/main ppc64el libpango-1.0-0 ppc64el 1.51.0+ds-4 [266 kB] 105s Get:105 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangoft2-1.0-0 ppc64el 1.51.0+ds-4 [49.5 kB] 105s Get:106 http://ftpmaster.internal/ubuntu noble/main ppc64el libpangocairo-1.0-0 ppc64el 1.51.0+ds-4 [31.2 kB] 105s Get:107 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper1 ppc64el 1.1.29 [13.5 kB] 105s Get:108 http://ftpmaster.internal/ubuntu noble/main ppc64el libpaper-utils ppc64el 1.1.29 [8710 B] 105s Get:109 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-16-0 ppc64el 10.42-4ubuntu1 [245 kB] 105s Get:110 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-32-0 ppc64el 10.42-4ubuntu1 [228 kB] 106s Get:111 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-posix3 ppc64el 10.42-4ubuntu1 [7016 B] 106s Get:112 http://ftpmaster.internal/ubuntu noble/main ppc64el libpcre2-dev ppc64el 10.42-4ubuntu1 [794 kB] 106s Get:113 http://ftpmaster.internal/ubuntu noble/main ppc64el libpkgconf3 ppc64el 1.8.1-2 [36.9 kB] 106s Get:114 http://ftpmaster.internal/ubuntu noble/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg-3ubuntu1 [902 kB] 106s Get:115 http://ftpmaster.internal/ubuntu noble/main ppc64el libpng-dev ppc64el 1.6.43-1 [327 kB] 106s Get:116 http://ftpmaster.internal/ubuntu noble/universe ppc64el libpotrace0 ppc64el 1.16-2 [19.7 kB] 106s Get:117 http://ftpmaster.internal/ubuntu noble/main ppc64el libptexenc1 ppc64el 2023.20230311.66589-9 [42.9 kB] 106s Get:118 http://ftpmaster.internal/ubuntu noble/main ppc64el libreadline-dev ppc64el 8.2-3 [226 kB] 106s Get:119 http://ftpmaster.internal/ubuntu noble/main ppc64el libsharpyuv0 ppc64el 1.3.2-0.4 [28.7 kB] 106s Get:120 http://ftpmaster.internal/ubuntu noble/main ppc64el libsm6 ppc64el 2:1.2.3-1build2 [18.5 kB] 106s Get:121 http://ftpmaster.internal/ubuntu noble/main ppc64el libsynctex2 ppc64el 2023.20230311.66589-9 [68.6 kB] 106s Get:122 http://ftpmaster.internal/ubuntu noble/main ppc64el libtcl8.6 ppc64el 8.6.13+dfsg-2 [1179 kB] 106s Get:123 http://ftpmaster.internal/ubuntu noble/universe ppc64el libteckit0 ppc64el 2.5.12+ds1-1 [399 kB] 106s Get:124 http://ftpmaster.internal/ubuntu noble/main ppc64el libtexlua53-5 ppc64el 2023.20230311.66589-9 [163 kB] 106s Get:125 http://ftpmaster.internal/ubuntu noble/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu1 [34.7 kB] 106s Get:126 http://ftpmaster.internal/ubuntu noble/main ppc64el libwebp7 ppc64el 1.3.2-0.4 [312 kB] 106s Get:127 http://ftpmaster.internal/ubuntu noble/main ppc64el libtiff6 ppc64el 4.5.1+git230720-3ubuntu1 [323 kB] 106s Get:128 http://ftpmaster.internal/ubuntu noble/main ppc64el libxft2 ppc64el 2.3.6-1 [59.8 kB] 106s Get:129 http://ftpmaster.internal/ubuntu noble/main ppc64el libxss1 ppc64el 1:1.2.3-1build2 [8982 B] 106s Get:130 http://ftpmaster.internal/ubuntu noble/main ppc64el libtk8.6 ppc64el 8.6.13-2 [916 kB] 106s Get:131 http://ftpmaster.internal/ubuntu noble/main ppc64el libxt6 ppc64el 1:1.2.1-1.1 [198 kB] 106s Get:132 http://ftpmaster.internal/ubuntu noble/main ppc64el libxmu6 ppc64el 2:1.1.3-3 [57.2 kB] 106s Get:133 http://ftpmaster.internal/ubuntu noble/main ppc64el libxpm4 ppc64el 1:3.5.17-1 [48.6 kB] 106s Get:134 http://ftpmaster.internal/ubuntu noble/main ppc64el libxaw7 ppc64el 2:1.0.14-1 [227 kB] 106s Get:135 http://ftpmaster.internal/ubuntu noble/main ppc64el libxi6 ppc64el 2:1.8.1-1 [37.9 kB] 106s Get:136 http://ftpmaster.internal/ubuntu noble/universe ppc64el libzzip-0-13 ppc64el 0.13.72+dfsg.1-1.1 [29.7 kB] 106s Get:137 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-bootstrap-sass all 3.4.3-2 [187 kB] 106s Get:138 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 106s Get:139 http://ftpmaster.internal/ubuntu noble/universe ppc64el node-normalize.css all 8.0.1-5 [10.8 kB] 106s Get:140 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc-data all 3.1.3-1 [92.4 kB] 106s Get:141 http://ftpmaster.internal/ubuntu noble/universe ppc64el pandoc ppc64el 3.1.3+ds-2 [22.5 MB] 106s Get:142 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf-bin ppc64el 1.8.1-2 [22.0 kB] 106s Get:143 http://ftpmaster.internal/ubuntu noble/main ppc64el pkgconf ppc64el 1.8.1-2 [16.7 kB] 106s Get:144 http://ftpmaster.internal/ubuntu noble/main ppc64el pkg-config ppc64el 1.8.1-2 [7170 B] 106s Get:145 http://ftpmaster.internal/ubuntu noble/main ppc64el zip ppc64el 3.0-13 [192 kB] 106s Get:146 http://ftpmaster.internal/ubuntu noble/main ppc64el unzip ppc64el 6.0-28ubuntu3 [192 kB] 106s Get:147 http://ftpmaster.internal/ubuntu noble/main ppc64el xdg-utils all 1.1.3-4.1ubuntu3 [62.0 kB] 106s Get:148 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-core ppc64el 4.3.2-1build1 [27.4 MB] 107s Get:149 http://ftpmaster.internal/ubuntu noble/main ppc64el liblzma-dev ppc64el 5.4.5-0.3 [243 kB] 107s Get:150 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-base-dev all 4.3.2-1build1 [4336 B] 107s Get:151 http://ftpmaster.internal/ubuntu noble/universe ppc64el pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 107s Get:152 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocgenerics all 0.48.1-2 [595 kB] 107s Get:153 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biobase ppc64el 2.62.0-1 [2138 kB] 107s Get:154 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4vectors ppc64el 0.40.2+dfsg-1 [2079 kB] 107s Get:155 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-iranges ppc64el 2.36.0-1 [2263 kB] 107s Get:156 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbi all 1.2.2-1 [823 kB] 107s Get:157 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit ppc64el 4.0.5-1 [1089 kB] 107s Get:158 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bit64 ppc64el 4.0.5-1 [479 kB] 107s Get:159 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rlang ppc64el 1.1.3-1 [1696 kB] 107s Get:160 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cli ppc64el 3.6.2-1 [1405 kB] 107s Get:161 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-glue ppc64el 1.7.0-1 [155 kB] 107s Get:162 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 107s Get:163 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-vctrs ppc64el 0.6.5-1 [1399 kB] 107s Get:164 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-blob all 1.2.4-1 [49.8 kB] 107s Get:165 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fastmap ppc64el 1.1.1-1 [72.4 kB] 107s Get:166 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cachem ppc64el 1.0.8-1 [72.2 kB] 107s Get:167 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-memoise all 2.0.1-1 [53.9 kB] 107s Get:168 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 108s Get:169 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-plogr all 0.2.0-3build1 [15.1 kB] 108s Get:170 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-cpp11 all 0.4.7-1 [266 kB] 108s Get:171 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rsqlite ppc64el 2.3.4-1 [1777 kB] 108s Get:172 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-curl ppc64el 5.2.0+dfsg-1 [192 kB] 108s Get:173 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jsonlite ppc64el 1.8.8+dfsg-1 [449 kB] 108s Get:174 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mime ppc64el 0.12-1 [36.1 kB] 108s Get:175 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sys ppc64el 3.4.2-1 [44.7 kB] 108s Get:176 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-askpass ppc64el 1.2.0-1 [24.5 kB] 108s Get:177 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-openssl ppc64el 2.1.1+dfsg-2 [405 kB] 108s Get:178 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-r6 all 2.5.1-1 [99.0 kB] 108s Get:179 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httr all 1.4.7+dfsg-1 [459 kB] 108s Get:180 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-png ppc64el 0.1-8-1 [44.1 kB] 108s Get:181 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-zlibbioc all 1.48.0+dfsg-1 [9596 B] 108s Get:182 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-xvector ppc64el 0.42.0-1 [626 kB] 108s Get:183 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bitops ppc64el 1.0-7-1 [30.0 kB] 108s Get:184 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcurl ppc64el 1.98-1.14+dfsg-1 [796 kB] 108s Get:185 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodbdata all 1.2.11-2 [12.3 MB] 108s Get:186 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomeinfodb all 1.38.6+dfsg-1 [3886 kB] 108s Get:187 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crayon all 1.5.2-1 [164 kB] 108s Get:188 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biostrings ppc64el 2.70.2+dfsg-1 [13.7 MB] 109s Get:189 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-keggrest all 1.42.0+dfsg-1 [188 kB] 109s Get:190 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationdbi all 1.64.1-1 [4897 kB] 109s Get:191 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-generics all 0.1.3-1 [81.3 kB] 109s Get:192 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-magrittr ppc64el 2.0.3-1 [154 kB] 109s Get:193 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fansi ppc64el 1.0.5-1 [627 kB] 109s Get:194 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-utf8 ppc64el 1.2.4-1 [148 kB] 109s Get:195 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 109s Get:196 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tibble ppc64el 3.2.1+dfsg-2 [415 kB] 109s Get:197 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-withr all 2.5.0-1 [225 kB] 109s Get:198 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyselect ppc64el 1.2.0+dfsg-1 [218 kB] 109s Get:199 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dplyr ppc64el 1.1.4-1 [1516 kB] 109s Get:200 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-purrr ppc64el 1.0.2-1 [503 kB] 109s Get:201 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringi ppc64el 1.8.3-1 [919 kB] 109s Get:202 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-stringr all 1.5.1-1 [290 kB] 109s Get:203 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tidyr ppc64el 1.3.1-1 [1163 kB] 109s Get:204 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dbplyr all 2.4.0+dfsg-1 [1172 kB] 109s Get:205 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-filelock ppc64el 1.0.3-1 [30.3 kB] 109s Get:206 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocfilecache all 2.10.1+dfsg-1 [300 kB] 109s Get:207 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-biocmanager all 1.30.22+dfsg-2 [125 kB] 109s Get:208 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocversion all 3.18.1-1 [11.0 kB] 109s Get:209 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rappdirs ppc64el 0.3.3-1 [47.7 kB] 109s Get:210 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-yaml ppc64el 2.3.8-1 [139 kB] 109s Get:211 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-littler ppc64el 0.3.19-1 [95.1 kB] 110s Get:212 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-pkgkitten all 0.2.3-1 [25.1 kB] 110s Get:213 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcpp ppc64el 1.0.12-1 [1989 kB] 110s Get:214 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-later ppc64el 1.3.2+dfsg-1 [127 kB] 110s Get:215 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-promises ppc64el 1.2.1+dfsg-1 [285 kB] 110s Get:216 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-httpuv ppc64el 1.6.14+dfsg-1 [527 kB] 110s Get:217 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xtable all 1:1.8-4-2 [689 kB] 110s Get:218 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-base64enc ppc64el 0.1-3-3 [28.1 kB] 110s Get:219 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-digest ppc64el 0.6.34-1 [198 kB] 110s Get:220 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ellipsis ppc64el 0.3.2-2 [35.9 kB] 110s Get:221 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmltools ppc64el 0.5.7-1 [369 kB] 110s Get:222 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fontawesome all 0.5.2-1 [1300 kB] 110s Get:223 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sourcetools ppc64el 0.1.7-1-1 [52.4 kB] 110s Get:224 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-commonmark ppc64el 1.9.1-1 [142 kB] 110s Get:225 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 110s Get:226 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-fs ppc64el 1.6.3+dfsg-1 [231 kB] 110s Get:227 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-sass ppc64el 0.4.8+dfsg-1 [1026 kB] 110s Get:228 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bslib all 0.6.1+dfsg-1 [5138 kB] 110s Get:229 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 110s Get:230 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-shiny all 1.8.0+dfsg-1 [2762 kB] 110s Get:231 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-evaluate all 0.23-1 [90.2 kB] 110s Get:232 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xfun ppc64el 0.41+dfsg-1 [415 kB] 110s Get:233 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-highr all 0.10+dfsg-1 [38.3 kB] 110s Get:234 http://ftpmaster.internal/ubuntu noble/main ppc64el libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 110s Get:235 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-knitr all 1.45+dfsg-1 [917 kB] 110s Get:236 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-tinytex all 0.49-1 [141 kB] 110s Get:237 http://ftpmaster.internal/ubuntu noble/universe ppc64el libjs-modernizr all 2.6.2+ds1-5 [48.3 kB] 110s Get:238 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rmarkdown all 2.25+dfsg-3 [1481 kB] 110s Get:239 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] 110s Get:240 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lazyeval ppc64el 0.2.2-1build1 [144 kB] 110s Get:241 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB] 110s Get:242 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-dt all 0.31+dfsg-1 [265 kB] 110s Get:243 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-interactivedisplaybase all 1.40.0+dfsg-1 [30.4 kB] 110s Get:244 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-annotationhub all 3.10.0+dfsg-1 [454 kB] 110s Get:245 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocio all 1.12.0+dfsg-1 [213 kB] 111s Get:246 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-formatr all 1.14-1 [152 kB] 111s Get:247 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lambda.r all 1.2.4-2build1 [119 kB] 111s Get:248 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 111s Get:249 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 111s Get:250 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-snow all 1:0.4.4-2 [97.6 kB] 111s Get:251 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-codetools all 0.2-19-1 [90.5 kB] 111s Get:252 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bh all 1.84.0-1 [5962 B] 111s Get:253 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocparallel ppc64el 1.36.0-1 [1351 kB] 111s Get:254 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-bookdown all 0.37+dfsg-1 [1408 kB] 111s Get:255 http://ftpmaster.internal/ubuntu noble/universe ppc64el tex-common all 6.18 [32.8 kB] 111s Get:256 http://ftpmaster.internal/ubuntu noble/main ppc64el t1utils ppc64el 1.41-4build2 [69.6 kB] 111s Get:257 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-binaries ppc64el 2023.20230311.66589-9 [12.4 MB] 111s Get:258 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-base all 2023.20240207-1 [21.7 MB] 112s Get:259 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-latex-base all 2023.20240207-1 [1238 kB] 112s Get:260 http://ftpmaster.internal/ubuntu noble/universe ppc64el texlive-bibtex-extra all 2023.20240207-1 [79.1 MB] 115s Get:261 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biocstyle all 2.30.0+dfsg-1 [451 kB] 115s Get:262 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml ppc64el 3.99-0.16.1-1 [1744 kB] 115s Get:263 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-hms all 1.1.3-1 [96.5 kB] 115s Get:264 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-prettyunits all 1.2.0-1 [162 kB] 115s Get:265 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-progress all 1.2.3-1 [91.9 kB] 115s Get:266 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-xml2 ppc64el 1.3.6-1 [328 kB] 115s Get:267 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-biomart all 2.58.2+dfsg-1 [433 kB] 115s Get:268 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicranges ppc64el 1.54.1+dfsg-1 [1822 kB] 115s Get:269 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rhtslib ppc64el 2.4.1+dfsg-1 [1548 kB] 115s Get:270 http://ftpmaster.internal/ubuntu noble-proposed/universe ppc64el r-bioc-rsamtools ppc64el 2.18.0+dfsg-1build1 [3815 kB] 116s Get:271 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrixstats ppc64el 1.2.0-1 [530 kB] 116s Get:272 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-matrixgenerics all 1.14.0-1 [407 kB] 116s Get:273 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-lattice ppc64el 0.22-5-1 [1343 kB] 116s Get:274 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-matrix ppc64el 1.6-5-1 [4057 kB] 116s Get:275 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-abind all 1.4-5-2 [63.6 kB] 116s Get:276 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-s4arrays ppc64el 1.2.0+dfsg-1 [502 kB] 116s Get:277 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-sparsearray ppc64el 1.2.4+dfsg-1 [1222 kB] 116s Get:278 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-delayedarray ppc64el 0.28.0+dfsg-1 [1786 kB] 116s Get:279 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-summarizedexperiment all 1.32.0+dfsg-1 [1134 kB] 116s Get:280 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicalignments ppc64el 1.38.2-1 [2139 kB] 116s Get:281 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rjson ppc64el 0.2.21-1 [144 kB] 116s Get:282 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-restfulr ppc64el 0.0.15-1 [380 kB] 116s Get:283 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-rtracklayer ppc64el 1.62.0-1 [5148 kB] 116s Get:284 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-bsgenome all 1.70.2-1 [6975 kB] 117s Get:285 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-genomicfeatures all 1.54.1+dfsg-1 [1817 kB] 117s Get:286 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-survival ppc64el 3.5-8-1 [6160 kB] 117s Get:287 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-snpstats ppc64el 1.52.0+dfsg-1 [7274 kB] 117s Get:288 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-bioc-variantannotation ppc64el 1.48.1-1 [3649 kB] 118s Get:289 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-colorspace ppc64el 2.1-0+dfsg-1 [1542 kB] 118s Get:290 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-farver ppc64el 2.1.1-1 [1365 kB] 118s Get:291 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-gtable all 0.3.4+dfsg-1 [191 kB] 118s Get:292 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-isoband ppc64el 0.2.7-1 [1486 kB] 118s Get:293 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mass ppc64el 7.3-60.0.1-1 [1126 kB] 118s Get:294 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-nlme ppc64el 3.1.164-1 [2281 kB] 118s Get:295 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-mgcv ppc64el 1.9-1-1 [3393 kB] 118s Get:296 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-labeling all 0.4.3-1 [62.1 kB] 118s Get:297 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-munsell all 0.5.0-2build1 [208 kB] 118s Get:298 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 118s Get:299 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-viridislite all 0.4.2-2 [1088 kB] 118s Get:300 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-scales all 1.3.0-1 [603 kB] 118s Get:301 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-ggplot2 all 3.4.4+dfsg-1 [3411 kB] 118s Get:302 http://ftpmaster.internal/ubuntu noble/universe ppc64el r-cran-runit all 0.4.32-3 [283 kB] 119s Preconfiguring packages ... 119s Fetched 466 MB in 18s (26.1 MB/s) 119s dpkg: libpsl5:ppc64el: dependency problems, but removing anyway as you requested: 119s wget depends on libpsl5 (>= 0.16.0). 119s libcurl4:ppc64el depends on libpsl5 (>= 0.16.0). 119s libcurl3-gnutls:ppc64el depends on libpsl5 (>= 0.16.0). 119s 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70097 files and directories currently installed.) 119s Removing libpsl5:ppc64el (0.21.2-1build1) ... 119s Selecting previously unselected package libpsl5t64:ppc64el. 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70092 files and directories currently installed.) 119s Preparing to unpack .../libpsl5t64_0.21.2-1.1_ppc64el.deb ... 119s Unpacking libpsl5t64:ppc64el (0.21.2-1.1) ... 119s Preparing to unpack .../curl_8.5.0-2ubuntu7_ppc64el.deb ... 119s Unpacking curl (8.5.0-2ubuntu7) over (8.5.0-2ubuntu2) ... 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70098 files and directories currently installed.) 119s Removing libcurl4:ppc64el (8.5.0-2ubuntu2) ... 119s Selecting previously unselected package libcurl4t64:ppc64el. 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70093 files and directories currently installed.) 119s Preparing to unpack .../000-libcurl4t64_8.5.0-2ubuntu7_ppc64el.deb ... 119s Unpacking libcurl4t64:ppc64el (8.5.0-2ubuntu7) ... 119s Selecting previously unselected package libc-dev-bin. 119s Preparing to unpack .../001-libc-dev-bin_2.39-0ubuntu2_ppc64el.deb ... 119s Unpacking libc-dev-bin (2.39-0ubuntu2) ... 119s Selecting previously unselected package linux-libc-dev:ppc64el. 119s Preparing to unpack .../002-linux-libc-dev_6.8.0-11.11_ppc64el.deb ... 119s Unpacking linux-libc-dev:ppc64el (6.8.0-11.11) ... 120s Selecting previously unselected package libcrypt-dev:ppc64el. 120s Preparing to unpack .../003-libcrypt-dev_1%3a4.4.36-4_ppc64el.deb ... 120s Unpacking libcrypt-dev:ppc64el (1:4.4.36-4) ... 120s Selecting previously unselected package libtirpc-dev:ppc64el. 120s Preparing to unpack .../004-libtirpc-dev_1.3.4+ds-1build1_ppc64el.deb ... 120s Unpacking libtirpc-dev:ppc64el (1.3.4+ds-1build1) ... 120s Selecting previously unselected package libnsl-dev:ppc64el. 120s Preparing to unpack .../005-libnsl-dev_1.3.0-3_ppc64el.deb ... 120s Unpacking libnsl-dev:ppc64el (1.3.0-3) ... 120s Selecting previously unselected package rpcsvc-proto. 120s Preparing to unpack .../006-rpcsvc-proto_1.4.2-0ubuntu6_ppc64el.deb ... 120s Unpacking rpcsvc-proto (1.4.2-0ubuntu6) ... 120s Selecting previously unselected package libc6-dev:ppc64el. 120s Preparing to unpack .../007-libc6-dev_2.39-0ubuntu2_ppc64el.deb ... 120s Unpacking libc6-dev:ppc64el (2.39-0ubuntu2) ... 120s Selecting previously unselected package libisl23:ppc64el. 120s Preparing to unpack .../008-libisl23_0.26-3_ppc64el.deb ... 120s Unpacking libisl23:ppc64el (0.26-3) ... 120s Selecting previously unselected package libmpc3:ppc64el. 120s Preparing to unpack .../009-libmpc3_1.3.1-1_ppc64el.deb ... 120s Unpacking libmpc3:ppc64el (1.3.1-1) ... 120s Selecting previously unselected package cpp-13-powerpc64le-linux-gnu. 120s Preparing to unpack .../010-cpp-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 120s Unpacking cpp-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package cpp-13. 120s Preparing to unpack .../011-cpp-13_13.2.0-17ubuntu2_ppc64el.deb ... 120s Unpacking cpp-13 (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package cpp-powerpc64le-linux-gnu. 120s Preparing to unpack .../012-cpp-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 120s Unpacking cpp-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 120s Selecting previously unselected package cpp. 120s Preparing to unpack .../013-cpp_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 120s Unpacking cpp (4:13.2.0-7ubuntu1) ... 120s Selecting previously unselected package libcc1-0:ppc64el. 120s Preparing to unpack .../014-libcc1-0_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libcc1-0:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libgomp1:ppc64el. 120s Preparing to unpack .../015-libgomp1_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libgomp1:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libitm1:ppc64el. 120s Preparing to unpack .../016-libitm1_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libitm1:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libatomic1:ppc64el. 120s Preparing to unpack .../017-libatomic1_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libatomic1:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libasan8:ppc64el. 120s Preparing to unpack .../018-libasan8_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libasan8:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package liblsan0:ppc64el. 120s Preparing to unpack .../019-liblsan0_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking liblsan0:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libtsan2:ppc64el. 120s Preparing to unpack .../020-libtsan2_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libtsan2:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libubsan1:ppc64el. 120s Preparing to unpack .../021-libubsan1_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libubsan1:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libquadmath0:ppc64el. 120s Preparing to unpack .../022-libquadmath0_14-20240303-1ubuntu1_ppc64el.deb ... 120s Unpacking libquadmath0:ppc64el (14-20240303-1ubuntu1) ... 120s Selecting previously unselected package libgcc-13-dev:ppc64el. 120s Preparing to unpack .../023-libgcc-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 120s Unpacking libgcc-13-dev:ppc64el (13.2.0-17ubuntu2) ... 120s Selecting previously unselected package gcc-13-powerpc64le-linux-gnu. 120s Preparing to unpack .../024-gcc-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 120s Unpacking gcc-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gcc-13. 121s Preparing to unpack .../025-gcc-13_13.2.0-17ubuntu2_ppc64el.deb ... 121s Unpacking gcc-13 (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package gcc-powerpc64le-linux-gnu. 121s Preparing to unpack .../026-gcc-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 121s Unpacking gcc-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package gcc. 121s Preparing to unpack .../027-gcc_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 121s Unpacking gcc (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package libstdc++-13-dev:ppc64el. 121s Preparing to unpack .../028-libstdc++-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 121s Unpacking libstdc++-13-dev:ppc64el (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-13-powerpc64le-linux-gnu. 121s Preparing to unpack .../029-g++-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 121s Unpacking g++-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-13. 121s Preparing to unpack .../030-g++-13_13.2.0-17ubuntu2_ppc64el.deb ... 121s Unpacking g++-13 (13.2.0-17ubuntu2) ... 121s Selecting previously unselected package g++-powerpc64le-linux-gnu. 121s Preparing to unpack .../031-g++-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 121s Unpacking g++-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package g++. 121s Preparing to unpack .../032-g++_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 121s Unpacking g++ (4:13.2.0-7ubuntu1) ... 121s Selecting previously unselected package build-essential. 121s Preparing to unpack .../033-build-essential_12.10ubuntu1_ppc64el.deb ... 121s Unpacking build-essential (12.10ubuntu1) ... 121s Selecting previously unselected package dctrl-tools. 121s Preparing to unpack .../034-dctrl-tools_2.24-3build2_ppc64el.deb ... 121s Unpacking dctrl-tools (2.24-3build2) ... 121s Selecting previously unselected package fonts-dejavu-mono. 121s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 121s Unpacking fonts-dejavu-mono (2.37-8) ... 121s Selecting previously unselected package fonts-dejavu-core. 121s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 121s Unpacking fonts-dejavu-core (2.37-8) ... 121s Selecting previously unselected package fontconfig-config. 121s Preparing to unpack .../037-fontconfig-config_2.15.0-1ubuntu1_ppc64el.deb ... 121s Unpacking fontconfig-config (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package libfontconfig1:ppc64el. 121s Preparing to unpack .../038-libfontconfig1_2.15.0-1ubuntu1_ppc64el.deb ... 121s Unpacking libfontconfig1:ppc64el (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package fontconfig. 121s Preparing to unpack .../039-fontconfig_2.15.0-1ubuntu1_ppc64el.deb ... 121s Unpacking fontconfig (2.15.0-1ubuntu1) ... 121s Selecting previously unselected package fonts-font-awesome. 122s Preparing to unpack .../040-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 122s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 122s Selecting previously unselected package fonts-glyphicons-halflings. 122s Preparing to unpack .../041-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 122s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 122s Selecting previously unselected package fonts-lmodern. 122s Preparing to unpack .../042-fonts-lmodern_2.005-1_all.deb ... 122s Unpacking fonts-lmodern (2.005-1) ... 122s Selecting previously unselected package fonts-mathjax. 122s Preparing to unpack .../043-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 122s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 122s Selecting previously unselected package libgfortran5:ppc64el. 122s Preparing to unpack .../044-libgfortran5_14-20240303-1ubuntu1_ppc64el.deb ... 122s Unpacking libgfortran5:ppc64el (14-20240303-1ubuntu1) ... 122s Selecting previously unselected package libgfortran-13-dev:ppc64el. 122s Preparing to unpack .../045-libgfortran-13-dev_13.2.0-17ubuntu2_ppc64el.deb ... 122s Unpacking libgfortran-13-dev:ppc64el (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package gfortran-13-powerpc64le-linux-gnu. 122s Preparing to unpack .../046-gfortran-13-powerpc64le-linux-gnu_13.2.0-17ubuntu2_ppc64el.deb ... 122s Unpacking gfortran-13-powerpc64le-linux-gnu (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package gfortran-13. 122s Preparing to unpack .../047-gfortran-13_13.2.0-17ubuntu2_ppc64el.deb ... 122s Unpacking gfortran-13 (13.2.0-17ubuntu2) ... 122s Selecting previously unselected package gfortran-powerpc64le-linux-gnu. 122s Preparing to unpack .../048-gfortran-powerpc64le-linux-gnu_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 122s Unpacking gfortran-powerpc64le-linux-gnu (4:13.2.0-7ubuntu1) ... 122s Selecting previously unselected package gfortran. 122s Preparing to unpack .../049-gfortran_4%3a13.2.0-7ubuntu1_ppc64el.deb ... 122s Unpacking gfortran (4:13.2.0-7ubuntu1) ... 122s Selecting previously unselected package icu-devtools. 122s Preparing to unpack .../050-icu-devtools_74.2-1ubuntu1_ppc64el.deb ... 122s Unpacking icu-devtools (74.2-1ubuntu1) ... 122s Selecting previously unselected package javascript-common. 122s Preparing to unpack .../051-javascript-common_11+nmu1_all.deb ... 122s Unpacking javascript-common (11+nmu1) ... 122s Selecting previously unselected package libio-string-perl. 122s Preparing to unpack .../052-libio-string-perl_1.08-4_all.deb ... 122s Unpacking libio-string-perl (1.08-4) ... 122s Selecting previously unselected package liblatex-tounicode-perl. 122s Preparing to unpack .../053-liblatex-tounicode-perl_0.54-2_all.deb ... 122s Unpacking liblatex-tounicode-perl (0.54-2) ... 122s Selecting previously unselected package libbibtex-parser-perl. 122s Preparing to unpack .../054-libbibtex-parser-perl_1.04+dfsg-1_all.deb ... 122s Unpacking libbibtex-parser-perl (1.04+dfsg-1) ... 122s Selecting previously unselected package libblas3:ppc64el. 122s Preparing to unpack .../055-libblas3_3.12.0-3_ppc64el.deb ... 122s Unpacking libblas3:ppc64el (3.12.0-3) ... 122s Selecting previously unselected package libblas-dev:ppc64el. 122s Preparing to unpack .../056-libblas-dev_3.12.0-3_ppc64el.deb ... 122s Unpacking libblas-dev:ppc64el (3.12.0-3) ... 122s Selecting previously unselected package libboost1.83-dev:ppc64el. 122s Preparing to unpack .../057-libboost1.83-dev_1.83.0-2ubuntu1_ppc64el.deb ... 122s Unpacking libboost1.83-dev:ppc64el (1.83.0-2ubuntu1) ... 125s Selecting previously unselected package libboost-dev:ppc64el. 125s Preparing to unpack .../058-libboost-dev_1.83.0.1ubuntu2_ppc64el.deb ... 125s Unpacking libboost-dev:ppc64el (1.83.0.1ubuntu2) ... 125s Selecting previously unselected package libbz2-dev:ppc64el. 125s Preparing to unpack .../059-libbz2-dev_1.0.8-5ubuntu1_ppc64el.deb ... 125s Unpacking libbz2-dev:ppc64el (1.0.8-5ubuntu1) ... 125s Selecting previously unselected package libpixman-1-0:ppc64el. 125s Preparing to unpack .../060-libpixman-1-0_0.42.2-1_ppc64el.deb ... 125s Unpacking libpixman-1-0:ppc64el (0.42.2-1) ... 125s Selecting previously unselected package libxcb-render0:ppc64el. 125s Preparing to unpack .../061-libxcb-render0_1.15-1_ppc64el.deb ... 125s Unpacking libxcb-render0:ppc64el (1.15-1) ... 125s Selecting previously unselected package libxcb-shm0:ppc64el. 125s Preparing to unpack .../062-libxcb-shm0_1.15-1_ppc64el.deb ... 125s Unpacking libxcb-shm0:ppc64el (1.15-1) ... 125s Selecting previously unselected package libxrender1:ppc64el. 125s Preparing to unpack .../063-libxrender1_1%3a0.9.10-1.1_ppc64el.deb ... 125s Unpacking libxrender1:ppc64el (1:0.9.10-1.1) ... 125s Selecting previously unselected package libcairo2:ppc64el. 125s Preparing to unpack .../064-libcairo2_1.18.0-1_ppc64el.deb ... 125s Unpacking libcairo2:ppc64el (1.18.0-1) ... 125s Selecting previously unselected package libdatrie1:ppc64el. 125s Preparing to unpack .../065-libdatrie1_0.2.13-3_ppc64el.deb ... 125s Unpacking libdatrie1:ppc64el (0.2.13-3) ... 125s Selecting previously unselected package libdeflate0:ppc64el. 125s Preparing to unpack .../066-libdeflate0_1.19-1_ppc64el.deb ... 125s Unpacking libdeflate0:ppc64el (1.19-1) ... 125s Selecting previously unselected package libgraphite2-3:ppc64el. 125s Preparing to unpack .../067-libgraphite2-3_1.3.14-2_ppc64el.deb ... 125s Unpacking libgraphite2-3:ppc64el (1.3.14-2) ... 125s Selecting previously unselected package libharfbuzz0b:ppc64el. 125s Preparing to unpack .../068-libharfbuzz0b_8.3.0-2_ppc64el.deb ... 125s Unpacking libharfbuzz0b:ppc64el (8.3.0-2) ... 125s Selecting previously unselected package x11-common. 125s Preparing to unpack .../069-x11-common_1%3a7.7+23ubuntu2_all.deb ... 125s Unpacking x11-common (1:7.7+23ubuntu2) ... 125s Selecting previously unselected package libice6:ppc64el. 125s Preparing to unpack .../070-libice6_2%3a1.0.10-1build2_ppc64el.deb ... 125s Unpacking libice6:ppc64el (2:1.0.10-1build2) ... 125s Selecting previously unselected package libicu-dev:ppc64el. 125s Preparing to unpack .../071-libicu-dev_74.2-1ubuntu1_ppc64el.deb ... 125s Unpacking libicu-dev:ppc64el (74.2-1ubuntu1) ... 125s Selecting previously unselected package libjpeg-turbo8:ppc64el. 125s Preparing to unpack .../072-libjpeg-turbo8_2.1.5-2ubuntu1_ppc64el.deb 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Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 125s Selecting previously unselected package libjs-popper.js. 125s Preparing to unpack .../078-libjs-popper.js_1.16.1+ds-6_all.deb ... 125s Unpacking libjs-popper.js (1.16.1+ds-6) ... 125s Selecting previously unselected package libjs-bootstrap4. 125s Preparing to unpack .../079-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 125s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 126s Selecting previously unselected package libjs-d3. 126s Preparing to unpack .../080-libjs-d3_3.5.17-4_all.deb ... 126s Unpacking libjs-d3 (3.5.17-4) ... 126s Selecting previously unselected package libjs-es5-shim. 126s Preparing to unpack .../081-libjs-es5-shim_4.6.7-2_all.deb ... 126s Unpacking libjs-es5-shim (4.6.7-2) ... 126s Selecting previously unselected package libjs-highlight.js. 126s Preparing to unpack .../082-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 126s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 126s Selecting previously unselected package libjs-jquery. 126s Preparing to unpack .../083-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 126s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 126s Selecting previously unselected package libjs-jquery-datatables. 126s Preparing to unpack .../084-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 126s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 126s Selecting previously unselected package libjs-jquery-datatables-extensions. 126s Preparing to unpack .../085-libjs-jquery-datatables-extensions_0.0+git20150910.28fd64e+dfsg-5_all.deb ... 126s Unpacking libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... 126s Selecting previously unselected package libjs-sifter.js. 126s Preparing to unpack .../086-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 126s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 126s Selecting previously unselected package libjs-microplugin.js. 126s Preparing to unpack .../087-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 126s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 126s Selecting previously unselected package libjs-jquery-selectize.js. 126s Preparing to unpack .../088-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 126s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 126s Selecting previously unselected package libjs-jquery-ui. 126s Preparing to unpack .../089-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 126s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 126s Selecting previously unselected package libjs-json. 126s Preparing to unpack .../090-libjs-json_0~20221030+~1.0.8-1_all.deb ... 126s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 126s Selecting previously unselected package libjs-lunr. 126s Preparing to unpack .../091-libjs-lunr_2.3.9~dfsg-2_all.deb ... 126s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 126s Selecting previously unselected package libjs-prettify. 126s Preparing to unpack .../092-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 126s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 126s Selecting previously unselected package libkpathsea6:ppc64el. 126s Preparing to unpack .../093-libkpathsea6_2023.20230311.66589-9_ppc64el.deb ... 126s Unpacking libkpathsea6:ppc64el (2023.20230311.66589-9) ... 126s Selecting previously unselected package liblapack3:ppc64el. 126s Preparing to unpack .../094-liblapack3_3.12.0-3_ppc64el.deb ... 126s Unpacking liblapack3:ppc64el (3.12.0-3) ... 126s Selecting previously unselected package liblapack-dev:ppc64el. 126s Preparing to unpack .../095-liblapack-dev_3.12.0-3_ppc64el.deb ... 126s Unpacking liblapack-dev:ppc64el (3.12.0-3) ... 126s Selecting previously unselected package liblerc4:ppc64el. 126s Preparing to unpack .../096-liblerc4_4.0.0+ds-4ubuntu1_ppc64el.deb ... 126s Unpacking liblerc4:ppc64el (4.0.0+ds-4ubuntu1) ... 126s Selecting previously unselected package libncurses-dev:ppc64el. 126s Preparing to unpack .../097-libncurses-dev_6.4+20240113-1ubuntu1_ppc64el.deb ... 126s Unpacking libncurses-dev:ppc64el (6.4+20240113-1ubuntu1) ... 126s Selecting previously unselected package libthai-data. 126s Preparing to unpack .../098-libthai-data_0.1.29-2_all.deb ... 126s Unpacking libthai-data (0.1.29-2) ... 126s Selecting previously unselected package libthai0:ppc64el. 126s Preparing to unpack .../099-libthai0_0.1.29-2_ppc64el.deb ... 126s Unpacking libthai0:ppc64el (0.1.29-2) ... 126s Selecting previously unselected package libpango-1.0-0:ppc64el. 126s Preparing to unpack .../100-libpango-1.0-0_1.51.0+ds-4_ppc64el.deb ... 126s Unpacking libpango-1.0-0:ppc64el (1.51.0+ds-4) ... 126s Selecting previously unselected package libpangoft2-1.0-0:ppc64el. 126s Preparing to unpack .../101-libpangoft2-1.0-0_1.51.0+ds-4_ppc64el.deb ... 126s Unpacking libpangoft2-1.0-0:ppc64el (1.51.0+ds-4) ... 126s Selecting previously unselected package libpangocairo-1.0-0:ppc64el. 126s Preparing to unpack .../102-libpangocairo-1.0-0_1.51.0+ds-4_ppc64el.deb ... 126s Unpacking libpangocairo-1.0-0:ppc64el (1.51.0+ds-4) ... 126s Selecting previously unselected package libpaper1:ppc64el. 126s Preparing to unpack .../103-libpaper1_1.1.29_ppc64el.deb ... 126s Unpacking libpaper1:ppc64el (1.1.29) ... 126s Selecting previously unselected package libpaper-utils. 126s Preparing to unpack .../104-libpaper-utils_1.1.29_ppc64el.deb ... 126s Unpacking libpaper-utils (1.1.29) ... 126s Selecting previously unselected package libpcre2-16-0:ppc64el. 126s Preparing to unpack .../105-libpcre2-16-0_10.42-4ubuntu1_ppc64el.deb ... 126s Unpacking libpcre2-16-0:ppc64el (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-32-0:ppc64el. 126s Preparing to unpack .../106-libpcre2-32-0_10.42-4ubuntu1_ppc64el.deb ... 126s Unpacking libpcre2-32-0:ppc64el (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-posix3:ppc64el. 126s Preparing to unpack .../107-libpcre2-posix3_10.42-4ubuntu1_ppc64el.deb ... 126s Unpacking libpcre2-posix3:ppc64el (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpcre2-dev:ppc64el. 126s Preparing to unpack .../108-libpcre2-dev_10.42-4ubuntu1_ppc64el.deb ... 126s Unpacking libpcre2-dev:ppc64el (10.42-4ubuntu1) ... 126s Selecting previously unselected package libpkgconf3:ppc64el. 126s Preparing to unpack .../109-libpkgconf3_1.8.1-2_ppc64el.deb ... 126s Unpacking libpkgconf3:ppc64el (1.8.1-2) ... 126s Selecting previously unselected package zlib1g-dev:ppc64el. 126s Preparing to unpack .../110-zlib1g-dev_1%3a1.3.dfsg-3ubuntu1_ppc64el.deb ... 126s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg-3ubuntu1) ... 126s Selecting previously unselected package libpng-dev:ppc64el. 126s Preparing to unpack .../111-libpng-dev_1.6.43-1_ppc64el.deb ... 126s Unpacking libpng-dev:ppc64el (1.6.43-1) ... 126s Selecting previously unselected package libpotrace0:ppc64el. 126s Preparing to unpack .../112-libpotrace0_1.16-2_ppc64el.deb ... 126s Unpacking libpotrace0:ppc64el (1.16-2) ... 126s Selecting previously unselected package libptexenc1:ppc64el. 126s Preparing to unpack .../113-libptexenc1_2023.20230311.66589-9_ppc64el.deb ... 126s Unpacking libptexenc1:ppc64el (2023.20230311.66589-9) ... 126s Selecting previously unselected package libreadline-dev:ppc64el. 127s Preparing to unpack .../114-libreadline-dev_8.2-3_ppc64el.deb ... 127s Unpacking libreadline-dev:ppc64el (8.2-3) ... 127s Selecting previously unselected package libsharpyuv0:ppc64el. 127s Preparing to unpack .../115-libsharpyuv0_1.3.2-0.4_ppc64el.deb ... 127s Unpacking libsharpyuv0:ppc64el (1.3.2-0.4) ... 127s Selecting previously unselected package libsm6:ppc64el. 127s Preparing to unpack .../116-libsm6_2%3a1.2.3-1build2_ppc64el.deb ... 127s Unpacking libsm6:ppc64el (2:1.2.3-1build2) ... 127s Selecting previously unselected package libsynctex2:ppc64el. 127s Preparing to unpack .../117-libsynctex2_2023.20230311.66589-9_ppc64el.deb ... 127s Unpacking libsynctex2:ppc64el (2023.20230311.66589-9) ... 127s Selecting previously unselected package libtcl8.6:ppc64el. 127s Preparing to unpack .../118-libtcl8.6_8.6.13+dfsg-2_ppc64el.deb ... 127s Unpacking libtcl8.6:ppc64el (8.6.13+dfsg-2) ... 127s Selecting previously unselected package libteckit0:ppc64el. 127s Preparing to unpack .../119-libteckit0_2.5.12+ds1-1_ppc64el.deb ... 127s Unpacking libteckit0:ppc64el (2.5.12+ds1-1) ... 127s Selecting previously unselected package libtexlua53-5:ppc64el. 127s Preparing to unpack .../120-libtexlua53-5_2023.20230311.66589-9_ppc64el.deb ... 127s Unpacking libtexlua53-5:ppc64el (2023.20230311.66589-9) ... 127s Selecting previously unselected package libjbig0:ppc64el. 127s Preparing to unpack .../121-libjbig0_2.1-6.1ubuntu1_ppc64el.deb ... 127s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu1) ... 127s Selecting previously unselected package libwebp7:ppc64el. 127s Preparing to unpack .../122-libwebp7_1.3.2-0.4_ppc64el.deb ... 127s Unpacking libwebp7:ppc64el (1.3.2-0.4) ... 127s Selecting previously unselected package libtiff6:ppc64el. 127s Preparing to unpack .../123-libtiff6_4.5.1+git230720-3ubuntu1_ppc64el.deb ... 127s Unpacking libtiff6:ppc64el (4.5.1+git230720-3ubuntu1) ... 127s Selecting previously unselected package libxft2:ppc64el. 127s Preparing to unpack .../124-libxft2_2.3.6-1_ppc64el.deb ... 127s Unpacking libxft2:ppc64el (2.3.6-1) ... 127s Selecting previously unselected package libxss1:ppc64el. 127s Preparing to unpack .../125-libxss1_1%3a1.2.3-1build2_ppc64el.deb ... 127s Unpacking libxss1:ppc64el (1:1.2.3-1build2) ... 127s Selecting previously unselected package libtk8.6:ppc64el. 127s Preparing to unpack .../126-libtk8.6_8.6.13-2_ppc64el.deb ... 127s Unpacking libtk8.6:ppc64el (8.6.13-2) ... 127s Selecting previously unselected package libxt6:ppc64el. 127s Preparing to unpack .../127-libxt6_1%3a1.2.1-1.1_ppc64el.deb ... 127s Unpacking libxt6:ppc64el (1:1.2.1-1.1) ... 127s Selecting previously unselected package libxmu6:ppc64el. 127s Preparing to unpack .../128-libxmu6_2%3a1.1.3-3_ppc64el.deb ... 127s Unpacking libxmu6:ppc64el (2:1.1.3-3) ... 127s Selecting previously unselected package libxpm4:ppc64el. 127s Preparing to unpack .../129-libxpm4_1%3a3.5.17-1_ppc64el.deb ... 127s Unpacking libxpm4:ppc64el (1:3.5.17-1) ... 127s Selecting previously unselected package libxaw7:ppc64el. 127s Preparing to unpack .../130-libxaw7_2%3a1.0.14-1_ppc64el.deb ... 127s Unpacking libxaw7:ppc64el (2:1.0.14-1) ... 127s Selecting previously unselected package libxi6:ppc64el. 127s Preparing to unpack .../131-libxi6_2%3a1.8.1-1_ppc64el.deb ... 127s Unpacking libxi6:ppc64el (2:1.8.1-1) ... 127s Selecting previously unselected package libzzip-0-13:ppc64el. 127s Preparing to unpack .../132-libzzip-0-13_0.13.72+dfsg.1-1.1_ppc64el.deb ... 127s Unpacking libzzip-0-13:ppc64el (0.13.72+dfsg.1-1.1) ... 127s Selecting previously unselected package node-bootstrap-sass. 127s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ... 127s Unpacking node-bootstrap-sass (3.4.3-2) ... 127s Selecting previously unselected package node-html5shiv. 127s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ... 127s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 127s Selecting previously unselected package node-normalize.css. 127s Preparing to unpack .../135-node-normalize.css_8.0.1-5_all.deb ... 127s Unpacking node-normalize.css (8.0.1-5) ... 127s Selecting previously unselected package pandoc-data. 127s Preparing to unpack .../136-pandoc-data_3.1.3-1_all.deb ... 127s Unpacking pandoc-data (3.1.3-1) ... 127s Selecting previously unselected package pandoc. 127s Preparing to unpack .../137-pandoc_3.1.3+ds-2_ppc64el.deb ... 127s Unpacking pandoc (3.1.3+ds-2) ... 128s Selecting previously unselected package pkgconf-bin. 128s Preparing to unpack .../138-pkgconf-bin_1.8.1-2_ppc64el.deb ... 128s Unpacking pkgconf-bin (1.8.1-2) ... 128s Selecting previously unselected package pkgconf:ppc64el. 128s Preparing to unpack .../139-pkgconf_1.8.1-2_ppc64el.deb ... 128s Unpacking pkgconf:ppc64el (1.8.1-2) ... 128s Selecting previously unselected package pkg-config:ppc64el. 128s Preparing to unpack .../140-pkg-config_1.8.1-2_ppc64el.deb ... 128s Unpacking pkg-config:ppc64el (1.8.1-2) ... 128s Selecting previously unselected package zip. 128s Preparing to unpack .../141-zip_3.0-13_ppc64el.deb ... 128s Unpacking zip (3.0-13) ... 128s Selecting previously unselected package unzip. 128s Preparing to unpack .../142-unzip_6.0-28ubuntu3_ppc64el.deb ... 128s Unpacking unzip (6.0-28ubuntu3) ... 128s Selecting previously unselected package xdg-utils. 128s Preparing to unpack .../143-xdg-utils_1.1.3-4.1ubuntu3_all.deb ... 128s Unpacking xdg-utils (1.1.3-4.1ubuntu3) ... 128s Selecting previously unselected package r-base-core. 128s Preparing to unpack .../144-r-base-core_4.3.2-1build1_ppc64el.deb ... 128s Unpacking r-base-core (4.3.2-1build1) ... 129s Selecting previously unselected package liblzma-dev:ppc64el. 129s Preparing to unpack .../145-liblzma-dev_5.4.5-0.3_ppc64el.deb ... 129s Unpacking liblzma-dev:ppc64el (5.4.5-0.3) ... 129s Selecting previously unselected package r-base-dev. 129s Preparing to unpack .../146-r-base-dev_4.3.2-1build1_all.deb ... 129s Unpacking r-base-dev (4.3.2-1build1) ... 129s Selecting previously unselected package pkg-r-autopkgtest. 129s Preparing to unpack .../147-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 129s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 129s Selecting previously unselected package r-bioc-biocgenerics. 129s Preparing to unpack .../148-r-bioc-biocgenerics_0.48.1-2_all.deb ... 129s Unpacking r-bioc-biocgenerics (0.48.1-2) ... 129s Selecting previously unselected package r-bioc-biobase. 129s Preparing to unpack .../149-r-bioc-biobase_2.62.0-1_ppc64el.deb ... 129s Unpacking r-bioc-biobase (2.62.0-1) ... 129s Selecting previously unselected package r-bioc-s4vectors. 129s Preparing to unpack .../150-r-bioc-s4vectors_0.40.2+dfsg-1_ppc64el.deb ... 129s Unpacking r-bioc-s4vectors (0.40.2+dfsg-1) ... 129s Selecting previously unselected package r-bioc-iranges. 129s Preparing to unpack .../151-r-bioc-iranges_2.36.0-1_ppc64el.deb ... 129s Unpacking r-bioc-iranges (2.36.0-1) ... 129s Selecting previously unselected package r-cran-dbi. 129s Preparing to unpack .../152-r-cran-dbi_1.2.2-1_all.deb ... 129s Unpacking r-cran-dbi (1.2.2-1) ... 129s Selecting previously unselected package r-cran-bit. 129s Preparing to unpack .../153-r-cran-bit_4.0.5-1_ppc64el.deb ... 129s Unpacking r-cran-bit (4.0.5-1) ... 129s Selecting previously unselected package r-cran-bit64. 129s Preparing to unpack .../154-r-cran-bit64_4.0.5-1_ppc64el.deb ... 129s Unpacking r-cran-bit64 (4.0.5-1) ... 129s Selecting previously unselected package r-cran-rlang. 129s Preparing to unpack .../155-r-cran-rlang_1.1.3-1_ppc64el.deb ... 129s Unpacking r-cran-rlang (1.1.3-1) ... 129s Selecting previously unselected package r-cran-cli. 129s Preparing to unpack .../156-r-cran-cli_3.6.2-1_ppc64el.deb ... 129s Unpacking r-cran-cli (3.6.2-1) ... 129s Selecting previously unselected package r-cran-glue. 129s Preparing to unpack .../157-r-cran-glue_1.7.0-1_ppc64el.deb ... 129s Unpacking r-cran-glue (1.7.0-1) ... 129s Selecting previously unselected package r-cran-lifecycle. 129s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 129s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 129s Selecting previously unselected package r-cran-vctrs. 129s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_ppc64el.deb ... 129s Unpacking r-cran-vctrs (0.6.5-1) ... 129s Selecting previously unselected package r-cran-blob. 129s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 129s Unpacking r-cran-blob (1.2.4-1) ... 129s Selecting previously unselected package r-cran-fastmap. 129s Preparing to unpack .../161-r-cran-fastmap_1.1.1-1_ppc64el.deb ... 129s Unpacking r-cran-fastmap (1.1.1-1) ... 129s Selecting previously unselected package r-cran-cachem. 129s Preparing to unpack .../162-r-cran-cachem_1.0.8-1_ppc64el.deb ... 129s Unpacking r-cran-cachem (1.0.8-1) ... 129s Selecting previously unselected package r-cran-memoise. 129s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 129s Unpacking r-cran-memoise (2.0.1-1) ... 129s Selecting previously unselected package r-cran-pkgconfig. 129s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 129s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 129s Selecting previously unselected package r-cran-plogr. 129s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 129s Unpacking r-cran-plogr (0.2.0-3build1) ... 129s Selecting previously unselected package r-cran-cpp11. 129s Preparing to unpack .../166-r-cran-cpp11_0.4.7-1_all.deb ... 129s Unpacking r-cran-cpp11 (0.4.7-1) ... 129s Selecting previously unselected package r-cran-rsqlite. 129s Preparing to unpack .../167-r-cran-rsqlite_2.3.4-1_ppc64el.deb ... 129s Unpacking r-cran-rsqlite (2.3.4-1) ... 129s Selecting previously unselected package r-cran-curl. 129s Preparing to unpack .../168-r-cran-curl_5.2.0+dfsg-1_ppc64el.deb ... 129s Unpacking r-cran-curl (5.2.0+dfsg-1) ... 129s Selecting previously unselected package r-cran-jsonlite. 129s Preparing to unpack .../169-r-cran-jsonlite_1.8.8+dfsg-1_ppc64el.deb ... 129s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 129s Selecting previously unselected package r-cran-mime. 129s Preparing to unpack .../170-r-cran-mime_0.12-1_ppc64el.deb ... 129s Unpacking r-cran-mime (0.12-1) ... 129s Selecting previously unselected package r-cran-sys. 129s Preparing to unpack .../171-r-cran-sys_3.4.2-1_ppc64el.deb ... 129s Unpacking r-cran-sys (3.4.2-1) ... 129s Selecting previously unselected package r-cran-askpass. 129s Preparing to unpack .../172-r-cran-askpass_1.2.0-1_ppc64el.deb ... 129s Unpacking r-cran-askpass (1.2.0-1) ... 129s Selecting previously unselected package r-cran-openssl. 129s Preparing to unpack .../173-r-cran-openssl_2.1.1+dfsg-2_ppc64el.deb ... 129s Unpacking r-cran-openssl (2.1.1+dfsg-2) ... 129s Selecting previously unselected package r-cran-r6. 129s Preparing to unpack .../174-r-cran-r6_2.5.1-1_all.deb ... 129s Unpacking r-cran-r6 (2.5.1-1) ... 129s Selecting previously unselected package r-cran-httr. 129s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 129s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 129s Selecting previously unselected package r-cran-png. 129s Preparing to unpack .../176-r-cran-png_0.1-8-1_ppc64el.deb ... 129s Unpacking r-cran-png (0.1-8-1) ... 129s Selecting previously unselected package r-bioc-zlibbioc. 129s Preparing to unpack .../177-r-bioc-zlibbioc_1.48.0+dfsg-1_all.deb ... 129s Unpacking r-bioc-zlibbioc (1.48.0+dfsg-1) ... 129s Selecting previously unselected package r-bioc-xvector. 130s Preparing to unpack .../178-r-bioc-xvector_0.42.0-1_ppc64el.deb ... 130s Unpacking r-bioc-xvector (0.42.0-1) ... 130s Selecting previously unselected package r-cran-bitops. 130s Preparing to unpack .../179-r-cran-bitops_1.0-7-1_ppc64el.deb ... 130s Unpacking r-cran-bitops (1.0-7-1) ... 130s Selecting previously unselected package r-cran-rcurl. 130s Preparing to unpack .../180-r-cran-rcurl_1.98-1.14+dfsg-1_ppc64el.deb ... 130s Unpacking r-cran-rcurl (1.98-1.14+dfsg-1) ... 130s Selecting previously unselected package r-bioc-genomeinfodbdata. 130s Preparing to unpack .../181-r-bioc-genomeinfodbdata_1.2.11-2_all.deb ... 130s Unpacking r-bioc-genomeinfodbdata (1.2.11-2) ... 130s Selecting previously unselected package r-bioc-genomeinfodb. 130s Preparing to unpack .../182-r-bioc-genomeinfodb_1.38.6+dfsg-1_all.deb ... 130s Unpacking r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 130s Selecting previously unselected package r-cran-crayon. 130s Preparing to unpack .../183-r-cran-crayon_1.5.2-1_all.deb ... 130s Unpacking r-cran-crayon (1.5.2-1) ... 130s Selecting previously unselected package r-bioc-biostrings. 130s Preparing to unpack .../184-r-bioc-biostrings_2.70.2+dfsg-1_ppc64el.deb ... 130s Unpacking r-bioc-biostrings (2.70.2+dfsg-1) ... 130s Selecting previously unselected package r-bioc-keggrest. 130s Preparing to unpack .../185-r-bioc-keggrest_1.42.0+dfsg-1_all.deb ... 130s Unpacking r-bioc-keggrest (1.42.0+dfsg-1) ... 130s Selecting previously unselected package r-bioc-annotationdbi. 130s Preparing to unpack .../186-r-bioc-annotationdbi_1.64.1-1_all.deb ... 130s Unpacking r-bioc-annotationdbi (1.64.1-1) ... 130s Selecting previously unselected package r-cran-generics. 130s Preparing to unpack .../187-r-cran-generics_0.1.3-1_all.deb ... 130s Unpacking r-cran-generics (0.1.3-1) ... 130s Selecting previously unselected package r-cran-magrittr. 130s Preparing to unpack .../188-r-cran-magrittr_2.0.3-1_ppc64el.deb ... 130s Unpacking r-cran-magrittr (2.0.3-1) ... 130s Selecting previously unselected package r-cran-fansi. 130s Preparing to unpack .../189-r-cran-fansi_1.0.5-1_ppc64el.deb ... 130s Unpacking r-cran-fansi (1.0.5-1) ... 130s Selecting previously unselected package r-cran-utf8. 130s Preparing to unpack .../190-r-cran-utf8_1.2.4-1_ppc64el.deb ... 130s Unpacking r-cran-utf8 (1.2.4-1) ... 130s Selecting previously unselected package r-cran-pillar. 130s Preparing to unpack .../191-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 130s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-tibble. 130s Preparing to unpack .../192-r-cran-tibble_3.2.1+dfsg-2_ppc64el.deb ... 130s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 130s Selecting previously unselected package r-cran-withr. 130s Preparing to unpack .../193-r-cran-withr_2.5.0-1_all.deb ... 130s Unpacking r-cran-withr (2.5.0-1) ... 130s Selecting previously unselected package r-cran-tidyselect. 130s Preparing to unpack .../194-r-cran-tidyselect_1.2.0+dfsg-1_ppc64el.deb ... 130s Unpacking r-cran-tidyselect (1.2.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-dplyr. 130s Preparing to unpack .../195-r-cran-dplyr_1.1.4-1_ppc64el.deb ... 130s Unpacking r-cran-dplyr (1.1.4-1) ... 130s Selecting previously unselected package r-cran-purrr. 130s Preparing to unpack .../196-r-cran-purrr_1.0.2-1_ppc64el.deb ... 130s Unpacking r-cran-purrr (1.0.2-1) ... 130s Selecting previously unselected package r-cran-stringi. 130s Preparing to unpack .../197-r-cran-stringi_1.8.3-1_ppc64el.deb ... 130s Unpacking r-cran-stringi (1.8.3-1) ... 130s Selecting previously unselected package r-cran-stringr. 130s Preparing to unpack .../198-r-cran-stringr_1.5.1-1_all.deb ... 130s Unpacking r-cran-stringr (1.5.1-1) ... 130s Selecting previously unselected package r-cran-tidyr. 130s Preparing to unpack .../199-r-cran-tidyr_1.3.1-1_ppc64el.deb ... 130s Unpacking r-cran-tidyr (1.3.1-1) ... 130s Selecting previously unselected package r-cran-dbplyr. 130s Preparing to unpack .../200-r-cran-dbplyr_2.4.0+dfsg-1_all.deb ... 130s Unpacking r-cran-dbplyr (2.4.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-filelock. 130s Preparing to unpack .../201-r-cran-filelock_1.0.3-1_ppc64el.deb ... 130s Unpacking r-cran-filelock (1.0.3-1) ... 130s Selecting previously unselected package r-bioc-biocfilecache. 130s Preparing to unpack .../202-r-bioc-biocfilecache_2.10.1+dfsg-1_all.deb ... 130s Unpacking r-bioc-biocfilecache (2.10.1+dfsg-1) ... 130s Selecting previously unselected package r-cran-biocmanager. 130s Preparing to unpack .../203-r-cran-biocmanager_1.30.22+dfsg-2_all.deb ... 130s Unpacking r-cran-biocmanager (1.30.22+dfsg-2) ... 130s Selecting previously unselected package r-bioc-biocversion. 130s Preparing to unpack .../204-r-bioc-biocversion_3.18.1-1_all.deb ... 130s Unpacking r-bioc-biocversion (3.18.1-1) ... 130s Selecting previously unselected package r-cran-rappdirs. 130s Preparing to unpack .../205-r-cran-rappdirs_0.3.3-1_ppc64el.deb ... 130s Unpacking r-cran-rappdirs (0.3.3-1) ... 130s Selecting previously unselected package r-cran-yaml. 130s Preparing to unpack .../206-r-cran-yaml_2.3.8-1_ppc64el.deb ... 130s Unpacking r-cran-yaml (2.3.8-1) ... 130s Selecting previously unselected package r-cran-littler. 130s Preparing to unpack .../207-r-cran-littler_0.3.19-1_ppc64el.deb ... 130s Unpacking r-cran-littler (0.3.19-1) ... 131s Selecting previously unselected package r-cran-pkgkitten. 131s Preparing to unpack .../208-r-cran-pkgkitten_0.2.3-1_all.deb ... 131s Unpacking r-cran-pkgkitten (0.2.3-1) ... 131s Selecting previously unselected package r-cran-rcpp. 131s Preparing to unpack .../209-r-cran-rcpp_1.0.12-1_ppc64el.deb ... 131s Unpacking r-cran-rcpp (1.0.12-1) ... 131s Selecting previously unselected package r-cran-later. 131s Preparing to unpack .../210-r-cran-later_1.3.2+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-later (1.3.2+dfsg-1) ... 131s Selecting previously unselected package r-cran-promises. 131s Preparing to unpack .../211-r-cran-promises_1.2.1+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-promises (1.2.1+dfsg-1) ... 131s Selecting previously unselected package r-cran-httpuv. 131s Preparing to unpack .../212-r-cran-httpuv_1.6.14+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-httpuv (1.6.14+dfsg-1) ... 131s Selecting previously unselected package r-cran-xtable. 131s Preparing to unpack .../213-r-cran-xtable_1%3a1.8-4-2_all.deb ... 131s Unpacking r-cran-xtable (1:1.8-4-2) ... 131s Selecting previously unselected package r-cran-base64enc. 131s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3_ppc64el.deb ... 131s Unpacking r-cran-base64enc (0.1-3-3) ... 131s Selecting previously unselected package r-cran-digest. 131s Preparing to unpack .../215-r-cran-digest_0.6.34-1_ppc64el.deb ... 131s Unpacking r-cran-digest (0.6.34-1) ... 131s Selecting previously unselected package r-cran-ellipsis. 131s Preparing to unpack .../216-r-cran-ellipsis_0.3.2-2_ppc64el.deb ... 131s Unpacking r-cran-ellipsis (0.3.2-2) ... 131s Selecting previously unselected package r-cran-htmltools. 131s Preparing to unpack .../217-r-cran-htmltools_0.5.7-1_ppc64el.deb ... 131s Unpacking r-cran-htmltools (0.5.7-1) ... 131s Selecting previously unselected package r-cran-fontawesome. 131s Preparing to unpack .../218-r-cran-fontawesome_0.5.2-1_all.deb ... 131s Unpacking r-cran-fontawesome (0.5.2-1) ... 131s Selecting previously unselected package r-cran-sourcetools. 131s Preparing to unpack .../219-r-cran-sourcetools_0.1.7-1-1_ppc64el.deb ... 131s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 131s Selecting previously unselected package r-cran-commonmark. 131s Preparing to unpack .../220-r-cran-commonmark_1.9.1-1_ppc64el.deb ... 131s Unpacking r-cran-commonmark (1.9.1-1) ... 131s Selecting previously unselected package r-cran-jquerylib. 131s Preparing to unpack .../221-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 131s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 131s Selecting previously unselected package r-cran-fs. 131s Preparing to unpack .../222-r-cran-fs_1.6.3+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-fs (1.6.3+dfsg-1) ... 131s Selecting previously unselected package r-cran-sass. 131s Preparing to unpack .../223-r-cran-sass_0.4.8+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-sass (0.4.8+dfsg-1) ... 131s Selecting previously unselected package r-cran-bslib. 131s Preparing to unpack .../224-r-cran-bslib_0.6.1+dfsg-1_all.deb ... 131s Unpacking r-cran-bslib (0.6.1+dfsg-1) ... 131s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 131s Preparing to unpack .../225-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 131s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 131s Selecting previously unselected package r-cran-shiny. 131s Preparing to unpack .../226-r-cran-shiny_1.8.0+dfsg-1_all.deb ... 131s Unpacking r-cran-shiny (1.8.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-evaluate. 131s Preparing to unpack .../227-r-cran-evaluate_0.23-1_all.deb ... 131s Unpacking r-cran-evaluate (0.23-1) ... 131s Selecting previously unselected package r-cran-xfun. 131s Preparing to unpack .../228-r-cran-xfun_0.41+dfsg-1_ppc64el.deb ... 131s Unpacking r-cran-xfun (0.41+dfsg-1) ... 131s Selecting previously unselected package r-cran-highr. 131s Preparing to unpack .../229-r-cran-highr_0.10+dfsg-1_all.deb ... 131s Unpacking r-cran-highr (0.10+dfsg-1) ... 131s Selecting previously unselected package libjs-mathjax. 131s Preparing to unpack .../230-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 131s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 132s Selecting previously unselected package r-cran-knitr. 132s Preparing to unpack .../231-r-cran-knitr_1.45+dfsg-1_all.deb ... 132s Unpacking r-cran-knitr (1.45+dfsg-1) ... 132s Selecting previously unselected package r-cran-tinytex. 132s Preparing to unpack .../232-r-cran-tinytex_0.49-1_all.deb ... 132s Unpacking r-cran-tinytex (0.49-1) ... 132s Selecting previously unselected package libjs-modernizr. 132s Preparing to unpack .../233-libjs-modernizr_2.6.2+ds1-5_all.deb ... 132s Unpacking libjs-modernizr (2.6.2+ds1-5) ... 132s Selecting previously unselected package r-cran-rmarkdown. 132s Preparing to unpack .../234-r-cran-rmarkdown_2.25+dfsg-3_all.deb ... 132s Unpacking r-cran-rmarkdown (2.25+dfsg-3) ... 132s Selecting previously unselected package r-cran-htmlwidgets. 132s Preparing to unpack .../235-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ... 132s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ... 132s Selecting previously unselected package r-cran-lazyeval. 132s Preparing to unpack .../236-r-cran-lazyeval_0.2.2-1build1_ppc64el.deb ... 132s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 132s Selecting previously unselected package r-cran-crosstalk. 132s Preparing to unpack .../237-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ... 132s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ... 132s Selecting previously unselected package r-cran-dt. 132s Preparing to unpack .../238-r-cran-dt_0.31+dfsg-1_all.deb ... 132s Unpacking r-cran-dt (0.31+dfsg-1) ... 132s Selecting previously unselected package r-bioc-interactivedisplaybase. 132s Preparing to unpack .../239-r-bioc-interactivedisplaybase_1.40.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 132s Selecting previously unselected package r-bioc-annotationhub. 132s Preparing to unpack .../240-r-bioc-annotationhub_3.10.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-annotationhub (3.10.0+dfsg-1) ... 132s Selecting previously unselected package r-bioc-biocio. 132s Preparing to unpack .../241-r-bioc-biocio_1.12.0+dfsg-1_all.deb ... 132s Unpacking r-bioc-biocio (1.12.0+dfsg-1) ... 132s Selecting previously unselected package r-cran-formatr. 132s Preparing to unpack .../242-r-cran-formatr_1.14-1_all.deb ... 132s Unpacking r-cran-formatr (1.14-1) ... 132s Selecting previously unselected package r-cran-lambda.r. 132s Preparing to unpack .../243-r-cran-lambda.r_1.2.4-2build1_all.deb ... 132s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 133s Selecting previously unselected package r-cran-futile.options. 133s Preparing to unpack .../244-r-cran-futile.options_1.0.1-3build1_all.deb ... 133s Unpacking r-cran-futile.options (1.0.1-3build1) ... 133s Selecting previously unselected package r-cran-futile.logger. 133s Preparing to unpack .../245-r-cran-futile.logger_1.4.3-4build1_all.deb ... 133s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 133s Selecting previously unselected package r-cran-snow. 133s Preparing to unpack .../246-r-cran-snow_1%3a0.4.4-2_all.deb ... 133s Unpacking r-cran-snow (1:0.4.4-2) ... 133s Selecting previously unselected package r-cran-codetools. 133s Preparing to unpack .../247-r-cran-codetools_0.2-19-1_all.deb ... 133s Unpacking r-cran-codetools (0.2-19-1) ... 133s Selecting previously unselected package r-cran-bh. 133s Preparing to unpack .../248-r-cran-bh_1.84.0-1_all.deb ... 133s Unpacking r-cran-bh (1.84.0-1) ... 133s Selecting previously unselected package r-bioc-biocparallel. 133s Preparing to unpack .../249-r-bioc-biocparallel_1.36.0-1_ppc64el.deb ... 133s Unpacking r-bioc-biocparallel (1.36.0-1) ... 133s Selecting previously unselected package r-cran-bookdown. 133s Preparing to unpack .../250-r-cran-bookdown_0.37+dfsg-1_all.deb ... 133s Unpacking r-cran-bookdown (0.37+dfsg-1) ... 133s Selecting previously unselected package tex-common. 133s Preparing to unpack .../251-tex-common_6.18_all.deb ... 133s Unpacking tex-common (6.18) ... 133s Selecting previously unselected package t1utils. 133s Preparing to unpack .../252-t1utils_1.41-4build2_ppc64el.deb ... 133s Unpacking t1utils (1.41-4build2) ... 133s Selecting previously unselected package texlive-binaries. 133s Preparing to unpack .../253-texlive-binaries_2023.20230311.66589-9_ppc64el.deb ... 133s Unpacking texlive-binaries (2023.20230311.66589-9) ... 133s Selecting previously unselected package texlive-base. 133s Preparing to unpack .../254-texlive-base_2023.20240207-1_all.deb ... 133s Unpacking texlive-base (2023.20240207-1) ... 134s Selecting previously unselected package texlive-latex-base. 134s Preparing to unpack .../255-texlive-latex-base_2023.20240207-1_all.deb ... 134s Unpacking texlive-latex-base (2023.20240207-1) ... 135s Selecting previously unselected package texlive-bibtex-extra. 135s Preparing to unpack .../256-texlive-bibtex-extra_2023.20240207-1_all.deb ... 135s Unpacking texlive-bibtex-extra (2023.20240207-1) ... 137s Selecting previously unselected package r-bioc-biocstyle. 137s Preparing to unpack .../257-r-bioc-biocstyle_2.30.0+dfsg-1_all.deb ... 137s Unpacking r-bioc-biocstyle (2.30.0+dfsg-1) ... 137s Selecting previously unselected package r-cran-xml. 137s Preparing to unpack .../258-r-cran-xml_3.99-0.16.1-1_ppc64el.deb ... 137s Unpacking r-cran-xml (3.99-0.16.1-1) ... 137s Selecting previously unselected package r-cran-hms. 137s Preparing to unpack .../259-r-cran-hms_1.1.3-1_all.deb ... 137s Unpacking r-cran-hms (1.1.3-1) ... 137s Selecting previously unselected package r-cran-prettyunits. 137s Preparing to unpack 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(2.4.1+dfsg-1) ... 137s Selecting previously unselected package r-bioc-rsamtools. 137s Preparing to unpack .../266-r-bioc-rsamtools_2.18.0+dfsg-1build1_ppc64el.deb ... 137s Unpacking r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 137s Selecting previously unselected package r-cran-matrixstats. 137s Preparing to unpack .../267-r-cran-matrixstats_1.2.0-1_ppc64el.deb ... 137s Unpacking r-cran-matrixstats (1.2.0-1) ... 137s Selecting previously unselected package r-bioc-matrixgenerics. 137s Preparing to unpack .../268-r-bioc-matrixgenerics_1.14.0-1_all.deb ... 137s Unpacking r-bioc-matrixgenerics (1.14.0-1) ... 137s Selecting previously unselected package r-cran-lattice. 137s Preparing to unpack .../269-r-cran-lattice_0.22-5-1_ppc64el.deb ... 137s Unpacking r-cran-lattice (0.22-5-1) ... 137s Selecting previously unselected package r-cran-matrix. 137s Preparing to unpack .../270-r-cran-matrix_1.6-5-1_ppc64el.deb ... 137s Unpacking r-cran-matrix (1.6-5-1) ... 137s Selecting previously unselected package r-cran-abind. 137s Preparing to unpack .../271-r-cran-abind_1.4-5-2_all.deb ... 137s Unpacking r-cran-abind (1.4-5-2) ... 137s Selecting previously unselected package r-bioc-s4arrays. 137s Preparing to unpack .../272-r-bioc-s4arrays_1.2.0+dfsg-1_ppc64el.deb ... 137s Unpacking r-bioc-s4arrays (1.2.0+dfsg-1) ... 137s Selecting previously unselected package r-bioc-sparsearray. 137s Preparing to unpack .../273-r-bioc-sparsearray_1.2.4+dfsg-1_ppc64el.deb ... 137s Unpacking r-bioc-sparsearray (1.2.4+dfsg-1) ... 137s Selecting previously unselected package r-bioc-delayedarray. 137s Preparing to unpack .../274-r-bioc-delayedarray_0.28.0+dfsg-1_ppc64el.deb ... 137s Unpacking r-bioc-delayedarray (0.28.0+dfsg-1) ... 137s Selecting previously unselected package r-bioc-summarizedexperiment. 137s Preparing to unpack .../275-r-bioc-summarizedexperiment_1.32.0+dfsg-1_all.deb ... 137s Unpacking r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 137s Selecting previously unselected package r-bioc-genomicalignments. 137s Preparing to unpack .../276-r-bioc-genomicalignments_1.38.2-1_ppc64el.deb ... 137s Unpacking r-bioc-genomicalignments (1.38.2-1) ... 138s Selecting previously unselected package r-cran-rjson. 138s Preparing to unpack .../277-r-cran-rjson_0.2.21-1_ppc64el.deb ... 138s Unpacking r-cran-rjson (0.2.21-1) ... 138s Selecting previously unselected package r-cran-restfulr. 138s Preparing to unpack .../278-r-cran-restfulr_0.0.15-1_ppc64el.deb ... 138s Unpacking r-cran-restfulr (0.0.15-1) ... 138s Selecting previously unselected package r-bioc-rtracklayer. 138s Preparing to unpack .../279-r-bioc-rtracklayer_1.62.0-1_ppc64el.deb ... 138s Unpacking r-bioc-rtracklayer (1.62.0-1) ... 138s Selecting previously unselected package r-bioc-bsgenome. 138s Preparing to unpack .../280-r-bioc-bsgenome_1.70.2-1_all.deb ... 138s Unpacking r-bioc-bsgenome (1.70.2-1) ... 138s Selecting previously unselected package r-bioc-genomicfeatures. 138s Preparing to unpack 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package r-cran-labeling. 138s Preparing to unpack .../292-r-cran-labeling_0.4.3-1_all.deb ... 138s Unpacking r-cran-labeling (0.4.3-1) ... 138s Selecting previously unselected package r-cran-munsell. 138s Preparing to unpack .../293-r-cran-munsell_0.5.0-2build1_all.deb ... 138s Unpacking r-cran-munsell (0.5.0-2build1) ... 138s Selecting previously unselected package r-cran-rcolorbrewer. 138s Preparing to unpack .../294-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 138s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 138s Selecting previously unselected package r-cran-viridislite. 138s Preparing to unpack .../295-r-cran-viridislite_0.4.2-2_all.deb ... 138s Unpacking r-cran-viridislite (0.4.2-2) ... 138s Selecting previously unselected package r-cran-scales. 138s Preparing to unpack .../296-r-cran-scales_1.3.0-1_all.deb ... 138s Unpacking r-cran-scales (1.3.0-1) ... 138s Selecting previously unselected package r-cran-ggplot2. 138s Preparing to unpack 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(2023.20230311.66589-9) ... 142s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 142s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 142s Setting up r-cran-lazyeval (0.2.2-1build1) ... 142s Setting up r-cran-commonmark (1.9.1-1) ... 142s Setting up r-cran-r6 (2.5.1-1) ... 142s Setting up r-cran-pkgkitten (0.2.3-1) ... 142s Setting up texlive-base (2023.20240207-1) ... 143s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 143s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 143s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 143s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 144s Setting up r-cran-magrittr (2.0.3-1) ... 144s Setting up r-cran-rappdirs (0.3.3-1) ... 144s Setting up r-cran-filelock (1.0.3-1) ... 144s 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r-cran-knitr (1.45+dfsg-1) ... 144s Setting up r-cran-mgcv (1.9-1-1) ... 144s Setting up g++ (4:13.2.0-7ubuntu1) ... 144s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 144s Setting up r-cran-cachem (1.0.8-1) ... 144s Setting up build-essential (12.10ubuntu1) ... 144s Setting up r-bioc-iranges (2.36.0-1) ... 144s Setting up r-cran-rjson (0.2.21-1) ... 144s Setting up r-cran-rcurl (1.98-1.14+dfsg-1) ... 144s Setting up r-cran-restfulr (0.0.15-1) ... 144s Setting up r-cran-vctrs (0.6.5-1) ... 144s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 144s Setting up r-cran-ellipsis (0.3.2-2) ... 144s Setting up r-cran-openssl (2.1.1+dfsg-2) ... 144s Setting up r-bioc-s4arrays (1.2.0+dfsg-1) ... 144s Setting up r-cran-stringr (1.5.1-1) ... 144s Setting up r-bioc-biocparallel (1.36.0-1) ... 144s Setting up r-bioc-rhtslib (2.4.1+dfsg-1) ... 144s Setting up r-cran-xml2 (1.3.6-1) ... 144s Setting up r-cran-munsell (0.5.0-2build1) ... 144s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 144s Setting up r-cran-survival (3.5-8-1) ... 144s Setting up r-bioc-biocio (1.12.0+dfsg-1) ... 144s Setting up gfortran (4:13.2.0-7ubuntu1) ... 144s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 144s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 144s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 144s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 144s Setting up r-cran-tidyselect (1.2.0+dfsg-1) ... 144s Setting up r-bioc-snpstats (1.52.0+dfsg-1) ... 144s Setting up texlive-bibtex-extra (2023.20240207-1) ... 144s Setting up r-bioc-genomeinfodb (1.38.6+dfsg-1) ... 144s Setting up r-cran-httr (1.4.7+dfsg-1) ... 144s Setting up r-cran-hms (1.1.3-1) ... 144s Setting up r-cran-scales (1.3.0-1) ... 144s Setting up r-cran-memoise (2.0.1-1) ... 144s Setting up r-cran-promises (1.2.1+dfsg-1) ... 144s Setting up r-cran-purrr (1.0.2-1) ... 144s Setting up r-cran-blob (1.2.4-1) ... 144s Setting up r-cran-htmltools (0.5.7-1) ... 144s Setting up r-bioc-xvector (0.42.0-1) ... 144s Setting up r-cran-sass (0.4.8+dfsg-1) ... 144s Setting up r-cran-dplyr (1.1.4-1) ... 144s Setting up r-cran-rsqlite (2.3.4-1) ... 144s Setting up r-cran-progress (1.2.3-1) ... 144s Setting up r-base-dev (4.3.2-1build1) ... 144s Setting up r-bioc-sparsearray (1.2.4+dfsg-1) ... 144s Setting up r-cran-ggplot2 (3.4.4+dfsg-1) ... 144s Setting up r-bioc-genomicranges (1.54.1+dfsg-1) ... 144s Setting up r-cran-httpuv (1.6.14+dfsg-1) ... 144s Setting up r-bioc-biostrings (2.70.2+dfsg-1) ... 144s Setting up r-cran-fontawesome (0.5.2-1) ... 144s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 144s Setting up r-cran-bslib (0.6.1+dfsg-1) ... 144s Setting up r-cran-tidyr (1.3.1-1) ... 144s Setting up r-bioc-rsamtools (2.18.0+dfsg-1build1) ... 144s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 144s Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... 144s Setting up r-bioc-delayedarray (0.28.0+dfsg-1) ... 144s Setting up r-bioc-summarizedexperiment (1.32.0+dfsg-1) ... 144s Setting up r-bioc-biocfilecache (2.10.1+dfsg-1) ... 144s Setting up r-bioc-keggrest (1.42.0+dfsg-1) ... 144s Setting up r-bioc-annotationdbi (1.64.1-1) ... 144s Setting up r-cran-shiny (1.8.0+dfsg-1) ... 144s Setting up r-cran-rmarkdown (2.25+dfsg-3) ... 144s Setting up r-bioc-biomart (2.58.2+dfsg-1) ... 144s Setting up r-bioc-genomicalignments (1.38.2-1) ... 144s Setting up r-cran-bookdown (0.37+dfsg-1) ... 144s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... 144s Setting up r-bioc-rtracklayer (1.62.0-1) ... 144s Setting up r-bioc-genomicfeatures (1.54.1+dfsg-1) ... 144s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... 144s Setting up r-bioc-bsgenome (1.70.2-1) ... 144s Setting up r-bioc-biocstyle (2.30.0+dfsg-1) ... 144s Setting up r-cran-dt (0.31+dfsg-1) ... 144s Setting up r-bioc-variantannotation (1.48.1-1) ... 144s Setting up r-bioc-interactivedisplaybase (1.40.0+dfsg-1) ... 144s Setting up r-bioc-annotationhub (3.10.0+dfsg-1) ... 144s Setting up autopkgtest-satdep (0) ... 144s Processing triggers for man-db (2.12.0-3) ... 145s Processing triggers for install-info (7.1-3) ... 145s Processing triggers for libc-bin (2.39-0ubuntu2) ... 145s Processing triggers for tex-common (6.18) ... 146s Running updmap-sys. This may take some time... done. 146s Running mktexlsr /var/lib/texmf ... done. 146s Building format(s) --all. 190s This may take some time... done. 198s (Reading database ... 121715 files and directories currently installed.) 198s Removing autopkgtest-satdep (0) ... 198s autopkgtest [21:54:38]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 198s autopkgtest [21:54:38]: test pkg-r-autopkgtest: [----------------------- 199s Test: Try to load the R library VariantAnnotation 199s 199s R version 4.3.2 (2023-10-31) -- "Eye Holes" 199s Copyright (C) 2023 The R Foundation for Statistical Computing 199s Platform: powerpc64le-unknown-linux-gnu (64-bit) 199s 199s R is free software and comes with ABSOLUTELY NO WARRANTY. 199s You are welcome to redistribute it under certain conditions. 199s Type 'license()' or 'licence()' for distribution details. 199s 199s R is a collaborative project with many contributors. 199s Type 'contributors()' for more information and 199s 'citation()' on how to cite R or R packages in publications. 199s 199s Type 'demo()' for some demos, 'help()' for on-line help, or 199s 'help.start()' for an HTML browser interface to help. 199s Type 'q()' to quit R. 199s 199s > library('VariantAnnotation') 199s Loading required package: BiocGenerics 199s 199s Attaching package: ‘BiocGenerics’ 199s 199s The following objects are masked from ‘package:stats’: 199s 199s IQR, mad, sd, var, xtabs 199s 199s The following objects are masked from ‘package:base’: 199s 199s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 199s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 199s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 199s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 199s Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, 199s table, tapply, union, unique, unsplit, which.max, which.min 199s 199s Loading required package: MatrixGenerics 199s Loading required package: matrixStats 199s 199s Attaching package: ‘MatrixGenerics’ 199s 199s The following objects are masked from ‘package:matrixStats’: 199s 199s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 199s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 199s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 199s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 199s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 199s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 199s colWeightedMeans, colWeightedMedians, colWeightedSds, 199s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 199s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 199s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 199s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 199s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 199s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 199s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 199s rowWeightedSds, rowWeightedVars 199s 199s Loading required package: GenomeInfoDb 199s Loading required package: S4Vectors 199s Loading required package: stats4 200s 200s Attaching package: ‘S4Vectors’ 200s 200s The following object is masked from ‘package:utils’: 200s 200s findMatches 200s 200s The following objects are masked from ‘package:base’: 200s 200s expand.grid, I, unname 200s 200s Loading required package: IRanges 201s Loading required package: GenomicRanges 201s Loading required package: SummarizedExperiment 201s Loading required package: Biobase 201s Welcome to Bioconductor 201s 201s Vignettes contain introductory material; view with 201s 'browseVignettes()'. To cite Bioconductor, see 201s 'citation("Biobase")', and for packages 'citation("pkgname")'. 201s 201s 201s Attaching package: ‘Biobase’ 201s 201s The following object is masked from ‘package:MatrixGenerics’: 201s 201s rowMedians 201s 201s The following objects are masked from ‘package:matrixStats’: 201s 201s anyMissing, rowMedians 201s 204s Loading required package: Rsamtools 204s Loading required package: Biostrings 204s Loading required package: XVector 205s 205s Attaching package: ‘Biostrings’ 205s 205s The following object is masked from ‘package:base’: 205s 205s strsplit 205s 210s 210s Attaching package: ‘VariantAnnotation’ 210s 210s The following object is masked from ‘package:base’: 210s 210s tabulate 210s 210s Warning message: 210s package ‘Rsamtools’ was built under R version 4.3.3 210s > 210s > 210s Other tests are currently unsupported! 210s They will be progressively added. 210s autopkgtest [21:54:50]: test pkg-r-autopkgtest: -----------------------] 211s pkg-r-autopkgtest PASS 211s autopkgtest [21:54:51]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 211s autopkgtest [21:54:51]: @@@@@@@@@@@@@@@@@@@@ summary 211s pkg-r-autopkgtest PASS 221s Creating nova instance adt-noble-ppc64el-r-bioc-variantannotation-20240317-215120-juju-7f2275-prod-proposed-migration-environment-2 from image adt/ubuntu-noble-ppc64el-server-20240316.img (UUID 5f323cde-6357-475d-9beb-0cc93b49185c)...